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Conserved domains on  [gi|1811917415|gb|QID03679|]
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cytochrome b (mitochondrion) [Euparatettix variabilis]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 656.08  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  12 IKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  92 FICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 172 DNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLMLISLMYPYIM 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 252 GDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQIMYWIMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1811917415 332 TVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLLN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 656.08  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  12 IKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  92 FICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 172 DNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLMLISLMYPYIM 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 252 GDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQIMYWIMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1811917415 332 TVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLLN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
17-365 1.04e-117

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 346.78  E-value: 1.04e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  17 NSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMFFICLY 96
Cdd:COG1290    25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  97 LHVGRGLYYNSFmlKE----TWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAVD 172
Cdd:COG1290   105 LHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 173 NPTLSRFFSLH-FILPFMIMAMSMIHLMFLHQTGSNNPLG----MNSNPEKIPFHPFFSIKDSITMLIIMMMLMLISLMY 247
Cdd:COG1290   183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 248 PyiMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQIM 325
Cdd:COG1290   263 P--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1811917415 326 YWIMVTTVILLTWVGKQPveEPYITVGQGLTMIYFSYFLL 365
Cdd:COG1290   341 GVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 1.63e-90

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 270.39  E-value: 1.63e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  10 PIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  90 MFFICLYLHVGRGLYYNSFM--LKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1811917415 168 GFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 8.84e-81

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 245.37  E-value: 8.84e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  19 LMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMFFICLYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  99 VGRGLYYNSF--MLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1811917415 177 SRFFSLHFILPFMIMAMSMIHLMFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-318 3.85e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 52.11  E-value: 3.85e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQF 318
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPF 124
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 656.08  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  12 IKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  92 FICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 172 DNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLMLISLMYPYIM 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 252 GDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQIMYWIMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1811917415 332 TVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLLN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 611.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   1 MKMPLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLL 80
Cdd:MTH00145    1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  81 RTLHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQ 160
Cdd:MTH00145   81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMML 240
Cdd:MTH00145  161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 241 MLISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYP 320
Cdd:MTH00145  241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917415 321 LNQIMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLLNTWISKMWDKFIM 378
Cdd:MTH00145  321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILD 378
CYTB MTH00119
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 606.13  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   1 MKMPLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLL 80
Cdd:MTH00119    1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  81 RTLHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQ 160
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMML 240
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 241 MLISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYP 320
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1811917415 321 LNQIMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFS-YFLLNTWISKMWDKFIM 378
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLGALENKMLN 379
CYTB MTH00191
cytochrome b; Provisional
 5-369 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 595.36  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   5 LRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLH 84
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  85 MNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQW 164
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 165 IWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLMLIS 244
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 245 LMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQI 324
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1811917415 325 MYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLLNTWI 369
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00131
cytochrome b; Provisional
 5-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 590.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   5 LRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLH 84
Cdd:MTH00131    4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  85 MNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQW 164
Cdd:MTH00131   84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 165 IWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLMLIS 244
Cdd:MTH00131  164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 245 LMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQI 324
Cdd:MTH00131  244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1811917415 325 MYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLL 365
Cdd:MTH00131  324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
CYTB MTH00074
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 587.42  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   1 MKMPLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLL 80
Cdd:MTH00074    1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  81 RTLHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQ 160
Cdd:MTH00074   81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMML 240
Cdd:MTH00074  161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 241 MLISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYP 320
Cdd:MTH00074  241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917415 321 LNQIMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLLNTWISKMWDKFIM 378
Cdd:MTH00074  321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLL 378
CYTB MTH00016
cytochrome b; Validated
 1-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 583.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   1 MKMPLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLL 80
Cdd:MTH00016    1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  81 RTLHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQ 160
Cdd:MTH00016   81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMML 240
Cdd:MTH00016  161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 241 MLISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYP 320
Cdd:MTH00016  241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917415 321 LNQIMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLLNTWISKMWDKFIM 378
Cdd:MTH00016  321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
CYTB MTH00100
cytochrome b; Provisional
 3-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 583.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   3 MPLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRT 82
Cdd:MTH00100    2 TNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRY 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  83 LHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIV 162
Cdd:MTH00100   82 LHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 163 QWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLML 242
Cdd:MTH00100  162 EWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLML 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 243 ISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLN 322
Cdd:MTH00100  242 LVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLS 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1811917415 323 QIMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLL 365
Cdd:MTH00100  322 QCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
CYTB MTH00034
cytochrome b; Validated
 4-365 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 564.33  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   4 PLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTL 83
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  84 HMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQ 163
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 164 WIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLMLI 243
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 244 SLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQ 323
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1811917415 324 IMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLL 365
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
CYTB MTH00224
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 509.08  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   1 MKMPLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLL 80
Cdd:MTH00224    1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  81 RTLHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQ 160
Cdd:MTH00224   81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMML 240
Cdd:MTH00224  161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 241 MLISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYP 320
Cdd:MTH00224  241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1811917415 321 LNQIMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLLNTWISKMWDKFI 377
Cdd:MTH00224  321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLL 377
CYTB MTH00022
cytochrome b; Validated
 3-365 7.10e-177

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 496.53  E-value: 7.10e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   3 MPLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRT 82
Cdd:MTH00022    1 MPLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  83 LHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIV 162
Cdd:MTH00022   81 LHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 163 QWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLML 242
Cdd:MTH00022  161 QWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSF 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 243 ISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLN 322
Cdd:MTH00022  241 IVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLG 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1811917415 323 QIMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLL 365
Cdd:MTH00022  321 RMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
CYTB MTH00053
cytochrome b; Provisional
 1-365 2.61e-170

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 479.97  E-value: 2.61e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   1 MKMPLRKTHPIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLL 80
Cdd:MTH00053    1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  81 RTLHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQ 160
Cdd:MTH00053   81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMML 240
Cdd:MTH00053  161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 241 MLISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYP 320
Cdd:MTH00053  241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1811917415 321 LNQIMYWIMVTTVILLTWVGKQPVEEPYITVGQGLTMIYFSYFLL 365
Cdd:MTH00053  321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
CYTB MTH00033
cytochrome b; Provisional
 3-365 8.53e-129

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 375.04  E-value: 8.53e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415   3 MPLRKTHPIIKIanNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRT 82
Cdd:MTH00033    1 MRLRKTGLLEPV--NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRY 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  83 LHMNGASMFFICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIV 162
Cdd:MTH00033   79 VHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIV 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 163 QWIWGGFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLML 242
Cdd:MTH00033  159 EWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVI 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 243 ISLM--YPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYP 320
Cdd:MTH00033  239 IGIEprIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNP 318

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1811917415 321 LNQIMYWIMVTTVILLTWVGKQPV-EEPYITVGQGLTMIYFSYFLL 365
Cdd:MTH00033  319 TGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
CYTB MTH00086
cytochrome b; Provisional
 16-365 1.35e-124

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 363.11  E-value: 1.35e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  16 NNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMFFICL 95
Cdd:MTH00086    4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  96 YLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAVDNPT 175
Cdd:MTH00086   84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 176 LSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKDsITMLIIMMMLMLISLMYPYIMGDPD 255
Cdd:MTH00086  164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLGDPE 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 256 NFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNfqgNQFYPLNQIMYWIMVTTVIL 335
Cdd:MTH00086  243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYT---SCLNKLNKFLVFSFIVVNVI 319

                         330       340       350
                  ....*....|....*....|....*....|
gi 1811917415 336 LTWVGKQPVEEPYITVGQGLTMIYFSYFLL 365
Cdd:MTH00086  320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
17-365 1.04e-117

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 346.78  E-value: 1.04e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  17 NSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMFFICLY 96
Cdd:COG1290    25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  97 LHVGRGLYYNSFmlKE----TWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAVD 172
Cdd:COG1290   105 LHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 173 NPTLSRFFSLH-FILPFMIMAMSMIHLMFLHQTGSNNPLG----MNSNPEKIPFHPFFSIKDSITMLIIMMMLMLISLMY 247
Cdd:COG1290   183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 248 PyiMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQIM 325
Cdd:COG1290   263 P--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1811917415 326 YWIMVTTVILLTWVGKQPveEPYITVGQGLTMIYFSYFLL 365
Cdd:COG1290   341 GVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 1.63e-90

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 270.39  E-value: 1.63e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  10 PIIKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  90 MFFICLYLHVGRGLYYNSFM--LKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1811917415 168 GFAVDNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 12-353 6.90e-86

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 264.15  E-value: 6.90e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  12 IKIANNSLMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMF 91
Cdd:MTH00046    2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  92 FICLYLHVGRGLYYNSFMLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAV 171
Cdd:MTH00046   82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 172 DNPTLSRFFSLHFILPFMIMAMSMIHLMFLHQTGSNNPL-GMNSNPEKIPFHPFFSIKDSITMLIIMMMLMLISLMYPYI 250
Cdd:MTH00046  162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLfSSNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 251 MGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIaLVMSIMITLIMPFYNKSNFqgnqFYPLNQIMYWIMV 330
Cdd:MTH00046  242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSV----YSVWRQVNFWLIV 316

                         330       340
                  ....*....|....*....|...
gi 1811917415 331 TTVILLTWVGKQPVEEPYITVGQ 353
Cdd:MTH00046  317 SLFFSLSYLGGCHPEYPYLLISQ 339
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 8.84e-81

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 245.37  E-value: 8.84e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  19 LMDLPTPLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMFFICLYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  99 VGRGLYYNSF--MLKETWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1811917415 177 SRFFSLHFILPFMIMAMSMIHLMFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 208-353 6.75e-45

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 151.64  E-value: 6.75e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 208 NPLGMNSNPEKIPFHPFFSIKDSITMLIIMMMLMLISLMYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1811917415 288 KLGGVIALVMSIMITLIMPFYNKSNFQgNQFYPLNQIMYWIMVTTVILLTWVGKQPVEEPYITVGQ 353
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQ 145
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
259-359 3.05e-41

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 140.31  E-value: 3.05e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQFYPLNQIMYWIMVTTVILLTW 338
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1811917415 339 VGKQPVEEPYITVGQGLTMIY 359
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
89-229 4.19e-38

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 134.68  E-value: 4.19e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  89 SMFFICLYLHVGRGLYYNSFMLKE--TWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIW 166
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1811917415 167 GGFAVDNPTLSRFFSLHF-ILPFMIMAMSMIHLMFLHQTGSNNPLGMNSNPEKIPFHPFFSIKD 229
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKM 144
PRK03735 PRK03735
cytochrome b6; Provisional
 34-210 3.83e-37

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 133.68  E-value: 3.83e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  34 FGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMFFICLYLHVGRGLYYNSFMLKE- 112
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 113 -TWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAVDNPTLSRFFSLH-FILPFMI 190
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170       180
                  ....*....|....*....|
gi 1811917415 191 MAMSMIHLMFLHQTGSNNPL 210
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 25-210 2.02e-31

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 118.28  E-value: 2.02e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415  25 PLNISMWWNFGSLLGLCLMIQIITGLFLAMHYTADIEMAFKSVIHVCRDVNNGWLLRTLHMNGASMFFICLYLHVGRGLY 104
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 105 YNSFMLKE--TWTVGVIILLLTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYVGNQIVQWIWGGFAVDNPTLSRFFSL 182
Cdd:CHL00070  107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170       180
                  ....*....|....*....|....*....
gi 1811917415 183 H-FILPFMIMAMSMIHLMFLHQTGSNNPL 210
Cdd:CHL00070  187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
petD CHL00058
cytochrome b6/f complex subunit IV
 248-314 4.12e-09

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 55.01  E-value: 4.12e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917415 248 PYIMGDPdnfipANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFY-NKSNFQ 314
Cdd:CHL00058   59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQ 121
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 248-318 7.20e-09

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 54.41  E-value: 7.20e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917415 248 PYIMGDPdnfipANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQF 318
Cdd:COG5679    60 PAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPF 125
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-318 3.85e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 52.11  E-value: 3.85e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917415 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIMITLIMPFYNKSNFQGNQF 318
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPF 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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