|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.43e-166 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 475.80 E-value: 1.43e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSCWWLVHSLMFLLSFIFMISVYSYSDLSMIGYYFGVDFYSFSLILLSFWICCLMITASSSIY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 81 IYSYYSNFFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 161 VNSVLNTLYYPLLLDFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSS 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 241 LGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 321 IYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1811917342 401 YSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFLKGDYFYF 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
41-442 |
4.96e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 348.75 E-value: 4.96e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 41 SYSDLSMIGYYFGVDFYSFSLILLSFWICCLMITASSSIYIYSYYSNFFIFMILFLFIMLYCSFSSLNLFSFYIFFESSL 120
Cdd:MTH00150 9 SFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 121 IPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVL---FKVNSVLNTLYYPLLLDFGSFYFLFYFFSVFAFLVSIPV 197
Cdd:MTH00150 89 IPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVIlwmSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPM 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 198 FLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYS 277
Cdd:MTH00150 169 YPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYS 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 278 SVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAA 357
Cdd:MTH00150 249 SVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAA 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 358 PPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFL 437
Cdd:MTH00150 329 PPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLIL 408
|
....*
gi 1811917342 438 KGDYF 442
Cdd:MTH00150 409 KSDLL 413
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-440 |
1.14e-113 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 341.34 E-value: 1.14e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSCWWLVHS---LMFLLSFIFMISVYSYSDLSMIGYYFGVDFYSFSLILLSFWICCLMITASS 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 78 SIYIYSYYSNFFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 158 LFKV---NSVLNTLYYPLLLDFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIfytNNSLSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 235 MKVVSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 315 FCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1811917342 395 TLYMYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFLKGD 440
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
2.30e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 330.23 E-value: 2.30e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSC---WWLVHSLMFLLSFI----FMISVYSYSDLSMigyYFGVDFYSFSLILLSFWICCLMI 73
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPkflWTNTTTYSLLIALLslqwLKPPYYPTKNLTQ---WLGIDQISAPLLVLSCWLLPLMI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 74 TASSSIYIYSYYSN--FFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVAS 151
Cdd:MTH00124 78 LASQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 152 LPLLLVLFKVNSVLNTLYYPLL------LDFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLK 225
Cdd:MTH00124 158 LPLLIAILYLHNQTGTLSLPMLqlthptLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLK 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 226 LGGYGIFRVMKVVSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMI 305
Cdd:MTH00124 238 LGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 306 GHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLI 385
Cdd:MTH00124 318 AHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTG 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1811917342 386 FLSFFSAVYTLYMYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFLK 438
Cdd:MTH00124 398 LATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILK 450
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
5.28e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 329.25 E-value: 5.28e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSCWWLVHSLMFLLSFIFMISVYS-YSDLSMIGYYFGVDFYSFSLILLSFWICCLMITASSSI 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNsFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 80 YIYSYYSNFFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 160 KVNSVLNTL---YYPLLLDFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMK 236
Cdd:MTH00205 161 FLNSLNFSLsmfFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 237 VVSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 317 LSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1811917342 397 YMYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFLKGDYFYF 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
4.98e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 298.75 E-value: 4.98e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSCWWLVHSLMFLLSFIFMISV----YSYSDLSMIGYYFGVDFYSFSLILLSFWICCLMITAS 76
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLmwfnLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 77 SSIYIYSYYSN--FFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPL 154
Cdd:MTH00068 81 QNHLKNEPINRqrTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 155 LLVLFKVNSVLNTLYYPLLLDFGSFYFLFY------FFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGG 228
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYtnkiwwLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 229 YGIFRVMKVVSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHG 308
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 309 LCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLS 388
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1811917342 389 FFSAVYTLYMYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFLK 438
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILK 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-437 |
2.62e-96 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 296.89 E-value: 2.62e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSCWWLVHSLMFLLSFIFMISVY-----SYSDLSMIGYYFGVDFYSFSLILLSFWIC--CLMI 73
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFllnnhWSSSWHNLSLSLATDSLSSPLIILSCWLAplSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 74 TASSSIYIYSYYSNFFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 154 LLLVLFKVNSVLNTLYYPL------LLDFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLselnwlTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 228 GYGIFRVMKVVS-SLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIG 306
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIF 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1811917342 387 LSFFSAVYTLYMYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFL 437
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIII 451
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-438 |
1.58e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 294.54 E-value: 1.58e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 5 LLMIIFLIPICFLTSCWWLVHSLMFLLSFIFMISVYSYSDLSMIG--YYFGVDFYSFSLILLSFWICCLMITASSSIYIY 82
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 83 SYYSN--FFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFK 160
Cdd:MTH00206 86 EPINRqrIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 161 VNSVLNTLYYPLLLDFGSFYFLFYFFSVF---AFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKV 237
Cdd:MTH00206 166 LQNSLGSLSLYILYFSKLTTWNNNLWWLAcilAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 238 VSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 318 SNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1811917342 398 MYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFLK 438
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILN 446
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
1.02e-92 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 287.56 E-value: 1.02e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSCWWL-----VHSLmfLLSFIFMISVYSYSDLSM-IGYYFGVDFYSFSLILLSFWICCLMIT 74
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSL--LISLISLLLLNQPNDNSLnFSLLFFSDSLSTPLLILTTWLLPLMLM 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 75 ASSSIYIYSYYSN--FFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASL 152
Cdd:MTH00110 79 ASQHHLSKEPLTRkkLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 153 PLLLVLFKVNSVLNTLYYPLL------LDFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKL 226
Cdd:MTH00110 159 PLLVALLYIQNNLGSLNFLLLqlwaqpLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 227 GGYGIFRVMKVVSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIG 306
Cdd:MTH00110 239 GGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIF 386
Cdd:MTH00110 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGL 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1811917342 387 LSFFSAVYTLYMYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFL 437
Cdd:MTH00110 399 NMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
1.68e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 269.13 E-value: 1.68e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSCWWL-----VHSLMFLLSFIFMISVYSYSDLSMIGYYFGVDFYSFSLILLSFWICCLMITA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLwtttlAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 76 SS--SIYIYSYYSNFFIFMILFLFIMLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00127 81 SQnhTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 154 LLLVLFKVNSVLNTL------YYPLLLDFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 228 GYGIFRVMKVVSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1811917342 388 SFFSAVYTLYMYSYSQHGLFYSGIYTCSLGYFREYHLLFLHWFPLNLLFLK 438
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILK 451
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
104-399 |
1.61e-55 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 191.45 E-value: 1.61e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 104 FSSLNLFSFYIFFESSLIPTLFLILGWGYqPERLQAGIYLIFYTLVASLPLLLVLF--KVNSVLNTLYYPLLLDF---GS 178
Cdd:COG1008 128 FLALDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILalYFLAGALTFDIAELAAAplpLT 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 179 FYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVmkvvsSLGL------QFNFFWLSL 252
Cdd:COG1008 207 AQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRF-----ALPLfpeasaYFAPLLAAL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 253 GVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLI 332
Cdd:COG1008 282 GVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIAD 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1811917342 333 NKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMY 399
Cdd:COG1008 362 LGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
5.91e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 184.50 E-value: 5.91e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 104 FSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFLF 183
Cdd:MTH00204 129 FSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQ 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 184 YFFSVFAFL---VSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQ-FNFFWLSLGVFGGVV 259
Cdd:MTH00204 209 KWLLVGFFLslaVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEyFAPLIVMLSVIAVIY 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 260 ISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNL 339
Cdd:MTH00204 289 GSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLT 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 340 MPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMY 399
Cdd:MTH00204 369 MPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-388 |
1.51e-49 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 170.19 E-value: 1.51e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 106 SLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLL------DFGSF 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltggLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 180 YFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFFWLSLGVFGGVV 259
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 260 ISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLS-NIIYERLGSRSLLINKGMMN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1811917342 339 LMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLS 388
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
1.23e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 170.23 E-value: 1.23e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 104 FSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFLF 183
Cdd:MTH00217 126 FTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQ 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 184 YFFSVFAFL---VSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRV-MKVVSSLGLQFNFFWLSLGVFGGVV 259
Cdd:MTH00217 206 YFIFLGFFLslaIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIY 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 260 ISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNL 339
Cdd:MTH00217 286 GSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVIT 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 340 MPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMY 399
Cdd:MTH00217 366 MPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-397 |
2.74e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 169.72 E-value: 2.74e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 101 YCSFSSLNLFSFYIFFESSLIPtLFLILG-WGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSF 179
Cdd:MTH00226 145 YAVFSVLDIFMFYILFEGVLIP-MYLILGiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHV 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 180 YF-----LFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQ-FNFFWLSLG 253
Cdd:MTH00226 224 VSeqtqkWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMG 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 254 VFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLIN 333
Cdd:MTH00226 304 IVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYY 383
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1811917342 334 KGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLY 397
Cdd:MTH00226 384 RGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
103-399 |
1.14e-46 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 168.07 E-value: 1.14e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 103 SFSSLNLFSFYIFFESSLIPTLFLILGWGYqPERLQAGIYLIFYTLVASLPLLLVLFKVNSV----LNTLYYPLLLDF-- 176
Cdd:PRK05846 127 VFAALDLLLFYVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLpl 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 177 -GSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVmkvvsSLGL------QFNFFW 249
Cdd:PRK05846 206 pPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF-----SLPLfpdashEFAPII 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 250 LSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK05846 281 ITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRD 360
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1811917342 330 LLINKGMMNLMP--SMTFWWFLLSSSNMaaPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMY 399
Cdd:PRK05846 361 IADYGGLAKVMPvlAAFFLFFAMASLGL--PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
104-399 |
1.53e-45 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 164.34 E-value: 1.53e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 104 FSSLNLFSFYIFFESSLIPTLFLILGWGyQPERLQAGIYLIFYTLVASLPLLL-VLFKVNSVLNTLYYPLLLDFGSFY-- 180
Cdd:TIGR01972 123 FLALDLFLFYVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLaILGLYFLGGGTFDLLELLNLPLPFgv 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 181 -FLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRV-MKVVSSLGLQFNFFWLSLGVFGGV 258
Cdd:TIGR01972 202 qTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAII 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 259 VISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMN 338
Cdd:TIGR01972 282 YGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLAN 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917342 339 LMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMY 399
Cdd:TIGR01972 362 KMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-436 |
8.50e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 150.06 E-value: 8.50e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 19 SCWWLVHSLMFLLSFIFMiSVYSYSDLSMIGYYFGVDFYSFSLILLsfwicclMITASSSIYIYSYYSNFFIFMILFLFI 98
Cdd:MTH00094 2 SLLFFFSPFLFFLFLMFF-SFLMFNNYSWSGLFFFFDSFVFVLLIF-------MMVFILGLVLLSEKNFNLLILSNLLIL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 99 MLYCSFSSLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGS 178
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEM 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 179 FYFLFYFfsvfaFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKvvsSLGLQFNFFWLSLGVFGGV 258
Cdd:MTH00094 154 FFILSLS-----FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILG---SLNFVYNNFWIIFSLLGMI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 259 VISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMN 338
Cdd:MTH00094 226 LSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 339 LMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMYSYSQHGLFYSGIYTCSLGY 418
Cdd:MTH00094 306 SSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
|
410
....*....|....*...
gi 1811917342 419 FREYHLLFLHWFPLNLLF 436
Cdd:MTH00094 386 SLPLVFMMFNMFWLSLFY 403
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
104-352 |
1.16e-28 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 117.83 E-value: 1.16e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 104 FSSLNLFSFYIFFESSLIPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLL-----LVLFKVNSVLNTL-----YYPLL 173
Cdd:PRK12561 104 FLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILvaglaLALSGDTFTFDLAelgakSYPLA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 174 LDFGSFYFLFYffsvfAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRV-MKVVSSLGLQFNFFWLSL 252
Cdd:PRK12561 183 LELLLYAGFLI-----AFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAIL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 253 GVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLI 332
Cdd:PRK12561 258 GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPN 337
|
250 260
....*....|....*....|
gi 1811917342 333 NKGMMNLMPsMTFWWFLLSS 352
Cdd:PRK12561 338 MGGLAKVMP-KTFALFTASS 356
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
108-403 |
6.05e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 112.16 E-value: 6.05e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 108 NLFSFYIFFESSLIPTLFLILGWGYqPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFG-----SFYFL 182
Cdd:COG0651 128 DLFNLFVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLaeldpGLLLA 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 183 FYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVV--SSLGLQFNFFWLSLGVFGGVVI 260
Cdd:COG0651 207 AFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 261 SFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLM 340
Cdd:COG0651 287 ALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1811917342 341 PSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSII-SWSSFMILLLIFLSFFSAVYTLYMYSYSQ 403
Cdd:COG0651 367 PLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
103-393 |
1.35e-24 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 105.80 E-value: 1.35e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 103 SFSSLNLFSFYIFFESSLIPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKVN-----------SVLNTLYYP 171
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygsneptlnfETLANQSYP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 172 LLLDFGSFYFLFYffsvfAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRV-MKVVSSLGLQFNFFWL 250
Cdd:CHL00011 207 VALEILFYIGFLI-----AYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLV 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 251 SLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSL 330
Cdd:CHL00011 282 IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYL 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1811917342 331 LINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAV 393
Cdd:CHL00011 362 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
103-398 |
1.44e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 99.77 E-value: 1.44e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 103 SFSSLNLFSFYIFFESSLIPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLL---LVLFKVNSVLNTLYYPLLLDFGSF 179
Cdd:PRK06473 123 AFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILvsfLGLVWLSGASSFDYEPLRSHTLPL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 180 Y--FLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFFWLS-LGVFG 256
Cdd:PRK06473 202 StqLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLAtWAVVS 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 257 GVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 336
Cdd:PRK06473 282 VLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGL 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1811917342 337 MNLMPSMTFWWFLLSSSNMAA---PPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYM 398
Cdd:PRK06473 362 LNPERGLPITGSLMILGVMASagiPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLL 426
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
104-358 |
1.74e-21 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 96.70 E-value: 1.74e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 104 FSSLNLFSFYIFFESSLIPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKVN----------SVLNTLYYPLL 173
Cdd:PRK02546 132 FAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAfygdtptfdmTALAAKDFGLG 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 174 LDFGSFYFLFYffsvfAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRV-MKVVSSLGLQFNFFWLSL 252
Cdd:PRK02546 211 FQLLCYAGLLI-----AYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 253 GVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLI 332
Cdd:PRK02546 286 GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDE 365
|
250 260
....*....|....*....|....*.
gi 1811917342 333 NKGMMNLMPSMTFWWFLLSSSNMAAP 358
Cdd:PRK02546 366 MGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
26-393 |
1.71e-19 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 89.98 E-value: 1.71e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 26 SLMFLLSFIFMISVYSYSDLSMIGYYFGVDFYSFSLILLSfwiccLMITASSSIYIYSYYSNFFIFMILFLFIMLYCSFS 105
Cdd:MTH00062 15 LLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILCFC 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 106 SLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFLFYF 185
Cdd:MTH00062 90 VNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 186 FSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLqfnFFWLSLGVFGGVVISFVCF 265
Cdd:MTH00062 170 VLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLCCLFSVFFLITAC 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 266 RQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTF 345
Cdd:MTH00062 247 SELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRV 326
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1811917342 346 WWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAV 393
Cdd:MTH00062 327 IVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLV 374
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
103-394 |
1.13e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 88.23 E-value: 1.13e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 103 SFSSLNLFSFYIFFESSLIPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLL---LVLFKVNSVLNTLYYPLLLDFGSF 179
Cdd:PRK07363 123 ALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLaafLGIVWLSGSTSFDYDAISTQNLSL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 180 Y--FLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRvmkvvssLGLQ-----FNFFWLSL 252
Cdd:PRK07363 202 NtqLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-------FGLQlfpqtWSLVAPGL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 253 GVFGGVVI---SFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK07363 275 AIIGTISViygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRD 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917342 330 LLINKGMMNLMPSMTFWWFLLSSSNMAA---PPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVY 394
Cdd:PRK07363 355 LDVLNGLMNPIRGLPLTSALLVLAGMASagiPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-401 |
1.80e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 87.63 E-value: 1.80e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 104 FSSLNLFSFYIFFESSLIPTLFLIlGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLL---LDFGSFY 180
Cdd:PRK08375 123 LLTADLFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagaLAENPTV 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 181 FLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFFWLS----LGVFG 256
Cdd:PRK08375 202 VTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWllavLALLS 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 257 GVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 336
Cdd:PRK08375 282 MLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGL 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1811917342 337 MNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIIS-WSSFMILLLIFLSFFSAVYTLYMYSY 401
Cdd:PRK08375 362 GRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
144-398 |
7.13e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 79.63 E-value: 7.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 144 IFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGIL 223
Cdd:PRK12667 186 FLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLV 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 224 LKLGGYGIFRVMKVV--SSLGLQFNFFWLS-----LGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWG 296
Cdd:PRK12667 266 VNVGAYAIIRFLYTIfgISPSLIDFRAALSpiliiLGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLG 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 297 CLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISW 376
Cdd:PRK12667 346 LAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLES 425
|
250 260
....*....|....*....|..
gi 1811917342 377 SsfMILLLIFLSFFSAVYTLYM 398
Cdd:PRK12667 426 G--FYLPALVLLIASAISLVGY 445
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
197-387 |
1.27e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 78.82 E-value: 1.27e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 197 VFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVmKVVSSLGLQFNF---FWLSLGVFGGVVISFVCFRQVDLKSL 273
Cdd:PRK06458 230 LFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRY-YILIDAAIGSDFpgrLLLIFGLLSVLVAAFFLLRQRDIKRL 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 274 IAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPsMTFWWFLLSSS 353
Cdd:PRK06458 309 FAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSP-LTGWGLMLGAL 387
|
170 180 190
....*....|....*....|....*....|....*..
gi 1811917342 354 NMA-APPSLNLLGEFSLLNSIISWSSF--MILLLIFL 387
Cdd:PRK06458 388 AIAgMPPFGVFISEFLILTAGLARGPLliAILLLLLL 424
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
106-391 |
3.10e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.77 E-value: 3.10e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 106 SLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFLFYF 185
Cdd:PRK08667 130 SANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 186 FSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFFWLSLGVFGGVVISFVCF 265
Cdd:PRK08667 210 LLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYAL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 266 RQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLM-----------IGHGLCSSGLFCLSNIIYERLGSRSLLINK 334
Cdd:PRK08667 290 KEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMG 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1811917342 335 GMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSII-----SWSSFMILLLIFLSFFS 391
Cdd:PRK08667 370 GLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFqsfsvADPLIKILLFSVLAIFA 431
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
191-399 |
4.73e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.94 E-value: 4.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 191 FLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVV--SSLGLQFNFFWLSLGVFGGVVISFVCFRQV 268
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 269 DLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWF 348
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVI 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1811917342 349 LLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLYMY 399
Cdd:PRK08676 376 LGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-398 |
1.74e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 59.73 E-value: 1.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 108 NLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLL---VLFKVNSVLNTLY--YPLLLDFGSFYFL 182
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLgiaLLYGQYGTLNMAYlaVKMSENPTVVAKI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 183 FYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILagILLKLGG-YGIFRVMkvvsslglqFNFFWLSLGVF--GGVV 259
Cdd:PRK08376 222 ALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVL---------FSIYGPAINLAtvGWVI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 260 ISFVCFR----------QVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCL---GSLSLMIGHGLCSSGLFCL 317
Cdd:PRK08376 291 IILGCLTmfvgvamavvQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLT 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 318 SNIIYERLGSRSLLINKGMMNLMPSMTFwWFLLSSSNMAAPPSLN------LLGEFS-LLNSIISWSSFMILLLIFLSFF 390
Cdd:PRK08376 371 AGAVIYETGTRNLNELGGLARTMPKTTI-AFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFV 449
|
....*...
gi 1811917342 391 SAVYTLYM 398
Cdd:PRK08376 450 KVFHTAFF 457
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-324 |
2.49e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 59.20 E-value: 2.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 104 FSSLNLFSFYIFFESSLIPTlFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFLF 183
Cdd:PRK07234 111 FVCADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFAL 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 184 YFFsvfAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFFwlslGVFGGVVISFV 263
Cdd:PRK07234 190 IAL---GLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIF----GVGTALLGVLF 262
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917342 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMtmnwWGCLGSLSlmigHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 263 ALLEKDLKRMLAFSTISQLGFILAAPL----VGGLYALA----HGLVKSTLFLCAGALPSR 315
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
103-399 |
5.17e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.47 E-value: 5.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 103 SFSSLNLFSFYIFFESSLIPTLFLILgWGYQPERLQAGIYLIFyTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFL 182
Cdd:PRK08668 114 VFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 183 FYFFSVFAFLVSI------PVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGL-----------QF 245
Cdd:PRK08668 192 TGFALIVFLFLLAfgvakaGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 246 NFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERL 325
Cdd:PRK08668 272 NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRT 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1811917342 326 GSRSLLINKGMMNLMPsMTFWWFLLSSSNMAA-PPSLNLLGEFSLLNSIISWSSFMILLLIFlsFFSAVYTLYMY 399
Cdd:PRK08668 352 GTTKISEMGGLIEKMP-FTFAMYLVAIISLAGiPPMSGFASKWLIFEALISKGMPITAFMAF--FGSIGSFLYVF 423
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
197-395 |
1.16e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.05 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 197 VFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSS-----LGLQFNFFWLSLGVFGGVVISFVCFRQVDLK 271
Cdd:PRK12662 225 LFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKanfvfTTLPFNNVFMILAALAIVFGSVLAILSKDIK 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 272 SLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWFLLS 351
Cdd:PRK12662 305 RIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLS 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1811917342 352 SSNMAAPPSLNLLGEFSLLNSIISwSSFMILLLIFL--SFFSAVYT 395
Cdd:PRK12662 385 LSLIGMPPTSGFVAKWYILDAFIK-SNAWIGLVVLLvgSGLSVIYV 429
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-75 |
1.67e-08 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 52.14 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 1 MLKYLLMIIFLIPICFLTSCWWL-----VHSLMFLLSFIFMISVYSYSDLSMIGYYFGVDFYSFSLILLSFWICCLMITA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
191-394 |
6.74e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 51.31 E-value: 6.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 191 FLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFFWL--SLGVFGGVVISFVCFRQV 268
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 269 DLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFWWF 348
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1811917342 349 LLSSSNMAAPPSLNLLGEFSLLNSIISWS-SFMILLLIFLSFFSAVY 394
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVY 422
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
198-398 |
1.13e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 50.91 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 198 FLFHLWLPSAhVEAPISGSMIL-AGILLKLGGYGIFRVMKVVSsLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAY 276
Cdd:PRK12646 227 FPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 277 SSVAH----MSMV-IGGLMTMNWWGCLGSLSLMI---------GHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPS 342
Cdd:PRK12646 305 STISQlgmiMAMVgIGGGYAQHQQDAIASIYVFVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPK 384
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1811917342 343 MTFwWFLLSSSNMAAPPSLN-LLGEFSLLNSIIS----------WSSFMILLLIFLSFFSAVYTLYM 398
Cdd:PRK12646 385 MNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQtgqlsqfsliSMIIIVFIGVIASIFTFTYALYM 450
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
198-401 |
1.22e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.81 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 198 FLFHLWLPSAHVEA-PIS-----GSMILAGILLKLGGYGIFRVMKVvsslglqFNFFWLSLGVFGGVVISFVCFRQVDLK 271
Cdd:PRK12650 225 FPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMITALMGAVFAVQKTDLK 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 272 SLIAYSSVAHMsmviGGLMTMNWWGCLGSLSLMI----GHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPsMTFWW 347
Cdd:PRK12650 298 KLTAYSTVSQL----GWIVATIGVGTPFALTAAVvhtlAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVS 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1811917342 348 FLLSSSNMAA-PPSLNLLGEFSLLNSIIS--WSSFMILLLIFLSFFSAVYTlYMYSY 401
Cdd:PRK12650 373 VTIAALSMAAvPPLFGFVSKEGMLTAFLEapGGNAGVVLLLVGAALGAVFT-FAYSA 428
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
200-362 |
5.16e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 48.73 E-value: 5.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 200 FHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVmkVVSSLGLQfNFFW----LSLGVFG---GVVISFVcfrQVDLKS 272
Cdd:PRK06521 229 LHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGAP-GWWWgvlvLALGAISavlGVLYALA---EHDLKR 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 273 LIAYSSVAHMSMVIGGL-MTM----NWWGCLGSLSLM------IGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMP 341
Cdd:PRK06521 303 LLAYSTIENIGIIFVGLgLAMvfiaYGMPLLAALALTaalyhlLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP 382
|
170 180
....*....|....*....|.
gi 1811917342 342 sMTFWWFLLSSSNMAAPPSLN 362
Cdd:PRK06521 383 -WTAWAFLIGCLAISALPPLN 402
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-397 |
9.19e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.04 E-value: 9.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 102 CSFSSLNLFSFYIFFESSLIPTlFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLL---LDFGS 178
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 179 --FYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSlGLQFNFFWLSLGVFG 256
Cdd:PRK12665 205 sgTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALLT 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 257 GVVISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 336
Cdd:PRK12665 284 MVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGL 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1811917342 337 MNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTLY 397
Cdd:PRK12665 364 AKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAWALVAGGVVTSLLTLY 424
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-396 |
3.01e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 46.35 E-value: 3.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 106 SLNLFSFYIFFESSLIPTLFLIlGWGYQPERLQAGI-YLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFLFY 184
Cdd:PRK06589 135 SSDLFTMFVCYELLTISTAFLI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIIL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 185 FFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLG-----LQFNFFWLSLGVFGGVV 259
Cdd:PRK06589 214 LLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSylqriFAEFNWLIFIPIVSIFY 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 260 ISFVCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNL 339
Cdd:PRK06589 294 SSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKS 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1811917342 340 MPSMTFWWFLLSSSNMAAPPSLNLLGEFSLL-----NSIISWSSFMILLLIFLSFFSAVYTL 396
Cdd:PRK06589 374 FPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
103-396 |
9.34e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.56 E-value: 9.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 103 SFSSLNLFSFYIFFESSLIPTlFLILGWGYQPERLQAGIYLIFYTLVASLPLLL---VLFKVNSVLNTLYYPLLLDFG-- 177
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLgigLLYGTFGTLNMAHIAMRLNDMgd 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 178 -SFYFLFYFFSVFAFLVSIPVFLFHlWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMK---VVSSLGLQFNFFWLS-- 251
Cdd:PRK12663 203 tATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTllfPQERELLHPLLATMAai 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 252 ---LGVFGGVVisfvcfrQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSR 328
Cdd:PRK12663 282 tmvIGALGALA-------YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYR 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917342 329 SLLINKGMMNLMPSMTFWWFLLSSSNMAAPPSLNLLGEFSLLNSIISWSSFMILLLIFLSFFSAVYTL 396
Cdd:PRK12663 355 SLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
198-386 |
2.20e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 43.75 E-value: 2.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 198 FLFHLWLPSAhVEAPI-------SGSMILAGILLklggygifrVMKVVSSLGLQFNFFWLsLGVFGG---VVISFVCFRQ 267
Cdd:PRK12647 212 FPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQTI-LPLFGGltmLTGALLAVRQ 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 268 VDLKSLIAYSSVahmsMVIGGLMTMNWWGCLGSLS----LMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPsM 343
Cdd:PRK12647 281 TDLKLILAYSTV----SALGTLVMLLGLGSELAIKaavlFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMP-I 355
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1811917342 344 TFWWFLLSSSNMAA-PPSLNLLGEFSLLNSII---SWSSFMILLLIF 386
Cdd:PRK12647 356 TAAAALLAALSMAGlPPLFGFLAKELIYEALLeapLWSLILTVAAVL 402
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
200-397 |
7.11e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 42.22 E-value: 7.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 200 FHLWLPSAhVEAPISGSMIL-AGILLKLGGYGIFRVMKVVSSLGlqfnfFW----LSLGVFGGVVISFVCFRQVDLKSLI 274
Cdd:PRK12644 222 FHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVP-----VWrptvLVLGLATMLLGGWRALRQHDLKLIL 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 275 AYSSVAHMS--MVIGGLMTMNwwGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPsMTFWWFLLSS 352
Cdd:PRK12644 296 AYGTVSQLGflTVLVGIGTRD--AALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQP-VLAVVAALAA 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1811917342 353 SNMAA-PPSLNLLGEFSLLNSII-----SWSSFMILLLIFL-SFFSAVYTLY 397
Cdd:PRK12644 373 ASMAGlPPLLGFVAKEAALEAVLhdgalGPAGPVVLAGIVLgSILTVAYSLR 424
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
201-362 |
7.40e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.74 E-value: 7.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 201 HLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFFWLSLGVFGGVVISFVCFRQVDLKSLIAYSSVA 280
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 281 HMSMVIGGL-----------MTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMMNLMPSMTFwWFL 349
Cdd:PRK08042 280 NIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI-AML 358
|
170
....*....|...
gi 1811917342 350 LSSSNMAAPPSLN 362
Cdd:PRK08042 359 VGLMAMAALPPLN 371
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-362 |
1.74e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.97 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 106 SLNLFSFYIFFESSLIPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYPLLLDFGSFYFLFYF 185
Cdd:PRK12649 130 SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKG 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 186 FSVfaFLVSIPVFL-----------FHLWLPSAhVEAPISGSMIL-AGILLKLGGYGIFRVMKVVSslGLQFNFFWLS-L 252
Cdd:PRK12649 210 HPL--FLITLILIFigaaaksaqgpFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS--GTEAWFILVSgT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 253 GVFGGVVISFVCFRQVDLKSLIAYSSVAHMSMviggLMTMNWW--------GCLGSLSLMIGHGLCSSGLFCLSNIIYER 324
Cdd:PRK12649 285 GMITMVLAGFLAFRQTDIKAILAYSTISQLAY----LMTMYGYttyhepglGVAAATFHLLNHATFKACLFLVAGIVAHE 360
|
250 260 270
....*....|....*....|....*....|....*...
gi 1811917342 325 LGSRSLLINKGMMNLMPsMTFWWFLLSSSNMAAPPSLN 362
Cdd:PRK12649 361 AATRDIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-388 |
3.55e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 39.55 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 103 SFSSLNLFSFYIFFESSLIPTLFLILGWGYQPErLQAGIYLIFYTLVASLPLLLVLFKVNSVLNTLYYP--------LLL 174
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMAdisvkiaeLSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 175 DFGSFYFLFYFFSVFAFLVSIPVFLFHLWLPSAHVEAPISGSMILAGILLKLGGYGIFRVMKVVSSLGLQFNFfwLSLGV 254
Cdd:PRK07691 203 GQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTH--YLILI 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 255 FGGVVISFVCF---RQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLL 331
Cdd:PRK07691 281 LALLTIIFGVIgavAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLK 360
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1811917342 332 INKGMMNLMPSMTfWWFLLSSSNMAA-PPSLNLLGEFSLLNSIISWSSFMILLLIFLS 388
Cdd:PRK07691 361 KMGGLIKRYPVLG-WMFFIAALSLAGiPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLS 417
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
200-396 |
6.13e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.47 E-value: 6.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 200 FHLWLPSAHVEAPISGSMILAgILLKLGgygifrVMKVVSSLGLQFNFFwLSLGVFGGVVISFVCFRQVDLKSLIAYSSV 279
Cdd:MTH00196 114 FHMWAPDVYEGAPTKTTALLA-IVPKLG------IFSILVSIGLNVNIL-LIGGLFSLFVGAIGALNQTKIKRLLAYSGI 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 280 AHMSMVIGGLMTMNWWGCLGSLSLMIGHGLCSsglFCLSNIIYERLGSRSLLIN-KGMMNLMPSMTFWWFLLSSSNMAAP 358
Cdd:MTH00196 186 GHMGFVLWGIEIGSFESIQASLVYLFIYIIMS---ICVFSIILALNVYKNLIIEfSGLSRRLPILAITLALTFLSIAGIP 262
|
170 180 190
....*....|....*....|....*....|....*....
gi 1811917342 359 PSLNLLGEFSLLNSIISWSSFMILLL-IFLSFFSAVYTL 396
Cdd:MTH00196 263 PLVGFLGKWLILLSGVVYQYYLIFLLaVFCSVIAGVYYV 301
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
198-362 |
7.27e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 38.75 E-value: 7.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 198 FLFHLWLPSAhVEAPI-------SGSMILAGILLKLGGYGIFRVMKV----VSSLGLqFNFFWlslgvfggvvISFVCFR 266
Cdd:PRK12645 227 FPFYIWLPDA-MEAPTpvsaylhSATMVKAGIYLVARFTPIFAGSQVwfwtVTLVGL-ITLFW----------GSLNAVK 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917342 267 QVDLKSLIAYSSVAHMSMVigglmtMNWWGcLGSLSL--------------------MIGHGLCSSGLFCLSNIIYERLG 326
Cdd:PRK12645 295 QTDLKGILAFSTVSQLGLI------MSLLG-IGAASLhyqgddskiyaaaitaaifhLINHATFKGSLFMIVGIVDHETG 367
|
170 180 190
....*....|....*....|....*....|....*.
gi 1811917342 327 SRSLLINKGMMNLMPsMTFWWFLLSSSNMAAPPSLN 362
Cdd:PRK12645 368 TRDIRKLGGLMTIMP-ITFTIALIGALSMAGLPPFN 402
|
|
| |
