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Conserved domains on  [gi|1808499960|gb|QHZ87370|]
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ATP synthase F0 subunit 6 (mitochondrion) [Thermobia sp. XL-2019]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 2.01e-105

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 303.24  E-value: 2.01e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFDPSSSiMSLSLNWLSTFLGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTILGPqNHPGTTFLFITLFMFI 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGP-KNKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  81 LFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1808499960 161 LMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSEVT 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 2.01e-105

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 303.24  E-value: 2.01e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFDPSSSiMSLSLNWLSTFLGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTILGPqNHPGTTFLFITLFMFI 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGP-KNKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  81 LFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1808499960 161 LMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSEVT 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-222 8.30e-49

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 159.29  E-value: 8.30e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   4 LFSSFDPSSSIM-SLSLNWLSTFLGLTLIPLSF----WFLPSRTEILWNLVTTTLHKEFKTILGPQNHPgTTFLFITLFM 78
Cdd:TIGR01131   1 LFSQFDISPITLfSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  79 FILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1808499960 159 VRLMANMVAGHLLLTLLGSTGPSL-SIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSE 222
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-221 5.74e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 142.15  E-value: 5.74e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  72 LFITLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNI 151
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 152 IRPGTLAVRLMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSS 221
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
21-221 9.39e-31

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 112.58  E-value: 9.39e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  21 WLSTFLGLTLIPLSFW----FLPSRTEILWNLVTTTLHKEFKTILGPQNHPGTTFLFITLFMFILFNNFLGLF---PFIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  94 TSSSHLTFTLTLALPLWLSFMIYGWINH-TQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVRLMANMVAGHLLL 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1808499960 173 TLLGSTGPSLSIWMJSLLLVT---QIMLLTLESAVAIIQSYVFAVLTTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 39-219 1.03e-26

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 101.69  E-value: 1.03e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  39 PSRTEILWNLVTTTLHKEFKTILGPQNHPGTTFLFiTLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGW 118
Cdd:COG0356    28 PGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGI 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 119 INHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVRLMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQIMLl 198
Cdd:COG0356   107 KKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLPVAWTA- 185

                         170       180
                  ....*....|....*....|.
gi 1808499960 199 tLESAVAIIQSYVFAVLTTLY 219
Cdd:COG0356   186 -FELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 2.01e-105

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 303.24  E-value: 2.01e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFDPSSSiMSLSLNWLSTFLGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTILGPqNHPGTTFLFITLFMFI 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGP-KNKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  81 LFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVR 160
Cdd:MTH00157   80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1808499960 161 LMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSEVT 224
Cdd:MTH00157  160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-222 8.30e-49

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 159.29  E-value: 8.30e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   4 LFSSFDPSSSIM-SLSLNWLSTFLGLTLIPLSF----WFLPSRTEILWNLVTTTLHKEFKTILGPQNHPgTTFLFITLFM 78
Cdd:TIGR01131   1 LFSQFDISPITLfSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  79 FILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1808499960 159 VRLMANMVAGHLLLTLLGSTGPSL-SIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSE 222
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-224 1.06e-45

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 151.34  E-value: 1.06e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFDPSSSIM--SLSLNWLSTFLGLTLIPLSFWFLPSRTEILWNLVTTtLHKEFKTILGPQNHPGTTFLFITLFM 78
Cdd:MTH00176    2 LVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFST-FLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  79 FILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLA 158
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1808499960 159 VRLMANMVAGHLLLTLLGSTGPSL---SIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSEVT 224
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMWGLlpvSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-221 5.74e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 142.15  E-value: 5.74e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  72 LFITLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNI 151
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 152 IRPGTLAVRLMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSS 221
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-222 2.94e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 129.85  E-value: 2.94e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFDPSSSI----MSLSLNWLSTFLGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTILGpQNHPGTTFLFITL 76
Cdd:MTH00005    2 LTDIFSSFDPATNSlfnnLSSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  77 FMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGT 156
Cdd:MTH00005   81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1808499960 157 LAVRLMANMVAGHLLLTLLGSTGPSL---SIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSE 222
Cdd:MTH00005  161 LSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-222 3.46e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 129.68  E-value: 3.46e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFDpSSSIMSLSLNWLSTFLGLTLIP-LSFWFLPSRTEILWNLVTTTLHKEFKTILGPQNHPGTtFLFITLFMF 79
Cdd:MTH00179    2 MLSMFDQFE-SPSLLGIPLLALALLLPWLLFPsLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  80 ILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAV 159
Cdd:MTH00179   80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1808499960 160 RLMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQ---IMLLTLESAVAIIQSYVFAVLTTLYSSE 222
Cdd:MTH00179  160 RLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 3.46e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 129.60  E-value: 3.46e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFDPSSSIMSL--SLNWLSTFLGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTiLGPQNHPGTTFLFITLFM 78
Cdd:MTH00173    2 MVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTR-SSGLNLGGFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  79 FILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLA 158
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1808499960 159 VRLMANMVAGHLLLTLLGSTGPSLSIWM----JSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSE 222
Cdd:MTH00173  161 VRLLANISAGHIVLTLIGNYLSSSLFSSsvvsLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-224 2.21e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 117.23  E-value: 2.21e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFDpSSSIMSLSLNWLSTFLGLTLIPL-SFWFLPSRTEILWNLVTTTLHKEFKTILGPQNHPGTTFLfITLFMF 79
Cdd:MTH00120    2 NLNFFDQFS-SPELLGIPLILLAMLIPALLIPSpKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALIL-TSLMLL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  80 ILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAV 159
Cdd:MTH00120   80 LLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGV 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1808499960 160 RLMANMVAGHLLLTLLGSTGPSL--SIWMJSLLLVTQIMLLT-LESAVAIIQSYVFAVLTTLYSSEVT 224
Cdd:MTH00120  160 RLTANLTAGHLLIQLISTATLNLlpTMPTLSLLTLIILLLLTiLELAVAMIQAYVFVLLLSLYLQENT 227
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 2-222 7.95e-31

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 113.14  E-value: 7.95e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   2 TNLFSSFDPSSsIMSLSLNWLSTFLGLTLIPLSF--WFLPSRTEILWNLVTTTLHKEFKTILGPQNHPGTTFLFiTLFMF 79
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALSWLFFINptNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-TVFIL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  80 ILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAV 159
Cdd:MTH00035   83 ILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGL 162

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 160 RLMANMVAGHLLLTLLGSTgpslsIWMJS-------LLLVTQIMLLTLESAVAIIQSYVFAVLTTLYSSE 222
Cdd:MTH00035  163 RLAANLTAGHLLIFLLSTA-----IWELSnsplisiITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP-synt_A pfam00119
ATP synthase A chain;
21-221 9.39e-31

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 112.58  E-value: 9.39e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  21 WLSTFLGLTLIPLSFW----FLPSRTEILWNLVTTTLHKEFKTILGPQNHPGTTFLFITLFMFILFNNFLGLF---PFIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  94 TSSSHLTFTLTLALPLWLSFMIYGWINH-TQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVRLMANMVAGHLLL 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1808499960 173 TLLGSTGPSLSIWMJSLLLVT---QIMLLTLESAVAIIQSYVFAVLTTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 3-219 6.45e-30

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 110.81  E-value: 6.45e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   3 NLFSSFDpSSSIMSLSLNWLSTFLGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTIlgpQNHPGTTF--LFITLFMFI 80
Cdd:MTH00101    4 NLFASFI-TPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTI---HNTKGQTWslMLMSLILFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  81 LFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVR 160
Cdd:MTH00101   80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1808499960 161 LMANMVAGHLLLTLLGSTG---PSLSIWMJSLLLVTQIMLLTLESAVAIIQSYVFAVLTTLY 219
Cdd:MTH00101  160 LTANITAGHLLIHLIGGATlalMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 72-222 5.91e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 108.04  E-value: 5.91e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  72 LFITLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNI 151
Cdd:MTH00132   72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1808499960 152 IRPGTLAVRLMANMVAGHLLLTLLGSTGPSLSIWM--JSLLLVTQIMLLT-LESAVAIIQSYVFAVLTTLYSSE 222
Cdd:MTH00132  152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMptVAILTATLLFLLTlLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-222 7.96e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 105.05  E-value: 7.96e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   1 MTNLFSSFdPSSSIMSLSLNWLSTFLGLTLIP-LSFWFLPSRteiLWNLVTTTLHKEFKTILGPQNHPGT--TFLFITLF 77
Cdd:MTH00073    2 NLSFFDQF-LSPTLLGIPLIMLAMLLPWLLFPtPTNKWLNNR---LSTLQIWFLQNFTKQLMLPLNTPGHkwALILTSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  78 MFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTL 157
Cdd:MTH00073   78 VFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1808499960 158 AVRLMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQIMLL---TLESAVAIIQSYVFAVLTTLYSSE 222
Cdd:MTH00073  158 GVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 39-219 1.03e-26

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 101.69  E-value: 1.03e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  39 PSRTEILWNLVTTTLHKEFKTILGPQNHPGTTFLFiTLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGW 118
Cdd:COG0356    28 PGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGI 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 119 INHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVRLMANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTQIMLl 198
Cdd:COG0356   107 KKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLPVAWTA- 185

                         170       180
                  ....*....|....*....|.
gi 1808499960 199 tLESAVAIIQSYVFAVLTTLY 219
Cdd:COG0356   186 -FELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 38-219 1.92e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 88.56  E-value: 1.92e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  38 LPSRTEILWNLVTTTLHKEFKTILGPQNHPGTTFLfITLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYG 117
Cdd:MTH00172   41 IPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAG 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 118 WINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVRLMANMVAGHLLLTLLGSTGPSL---SIWMJSLLLVTQ 194
Cdd:MTH00172  120 FWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMlcaSGFLSLFPLLIM 199

                         170       180
                  ....*....|....*....|....*
gi 1808499960 195 IMLLTLESAVAIIQSYVFAVLTTLY 219
Cdd:MTH00172  200 VFITLLEIAVAVIQAYVFCLLTTIY 224
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 5-219 1.82e-20

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 85.62  E-value: 1.82e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960   5 FSSFDPSSSIMSLSLNWLSTFLGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTILGPQNHPgTTFLFITLFMFILFNN 84
Cdd:PRK05815    9 FGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKK-FAPLAFTLFLFILLMN 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  85 FLGLFP-FIFTSSSHLTFTLTLALPLWLSFMIYG-WINHTQHMFAHLVPlgtpgPLMPFMVCIEITSNIIRPGTLAVRLM 162
Cdd:PRK05815   88 LLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYL-----QPHPLLLPIEIISEFSRPISLSLRLF 162

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1808499960 163 ANMVAGHLLLTLLGSTGPSLSIWMJSLLLVTqIMLLTLESAVAIIQSYVFAVLTTLY 219
Cdd:PRK05815  163 GNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 13-219 1.28e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 83.90  E-value: 1.28e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  13 SIMSLSLNWLSTF----LGLTLIPLSFWFL-------PSRTEILWNLVTTTLHKEFKTILGpQNHPGTTFLFITLFMFIL 81
Cdd:MTH00175   16 TIQAFLGDWLVTFtnssMMMVLAVIIFWLLlkgdkliPNRWQSIMELIYLNIRSVVHDNLG-KSGQKYFPFILSLFLFIA 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  82 FNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVRL 161
Cdd:MTH00175   95 ILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRL 174

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1808499960 162 MANMVAGHLLLT-LLGSTGPSLS--IWMJSLLLVTQIMLLT-LESAVAIIQSYVFAVLTTLY 219
Cdd:MTH00175  175 AANISAGHLLFAiLSGFAFNMLSngLIILSLFPMLIMIFITlLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 37-219 5.84e-14

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 68.81  E-value: 5.84e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  37 FLPSRTEILWNLVTTTLHKEFKTILGPQNHPGTTFLfITLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIY 116
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 117 GWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGTLAVRLMANMVAGHLLLTLLGSTGPSL---SIWMJSLLLVT 193
Cdd:MTH00174  138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMintGILIGSFVPFA 217

                         170       180
                  ....*....|....*....|....*..
gi 1808499960 194 QIMLLT-LESAVAIIQSYVFAVLTTLY 219
Cdd:MTH00174  218 ILIFVTiLEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 74-219 1.22e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 68.62  E-value: 1.22e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  74 ITLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALplwLSFMIYGWINHTQH----MFAHLVPlGTPGPLMPFMVCIEITS 149
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLTG-GTHWSLWIIMIPIEFIG 250

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 150 NIIRPGTLAVRLMANMVAGHLLLtllgstgpsLSIWMJSLLLVTQIM-----------LLTLESAVAIIQSYVFAVLTTL 218
Cdd:PRK13419  251 LFTKPFALTVRLFANMTAGHIVI---------LSLIFISFILKSYIVavavsvpfaifIYLLELFVAFLQAYIFTMLSAL 321


                  .
gi 1808499960 219 Y 219
Cdd:PRK13419  322 F 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 74-219 1.44e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 54.13  E-value: 1.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  74 ITLFMFILFNNFLGLFPFI-----------------------------------FTSSSHLTFTLTLALPLWLSFMIYGW 118
Cdd:PRK13417  162 FTLFFFILFCNLMGLVPSVgeltvvasdygglvalgvmdhtphalptfakvwsgITVTGDISVTMTLALLTMFLIYGAGF 241

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 119 INHTQHMFAHLVPLGTPGPLMPFMVCIE-ITSNIIRPGTLAVRLMANMVAGHLLLTLLGSTGPSLSIWMJSLL-LVTQIM 196
Cdd:PRK13417  242 SYQGPKFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQSWGIVPVsVIGSGL 321

                         170       180
                  ....*....|....*....|...
gi 1808499960 197 LLTLESAVAIIQSYVFAVLTTLY 219
Cdd:PRK13417  322 IYVLEIFVAFLQAYIFVLLTSLF 344
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 22-219 4.11e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 48.97  E-value: 4.11e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  22 LSTFLGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTILgpQNHPGTTFLFI-TLFMFILFNNFLGLFPFIFTSSSHLT 100
Cdd:PRK13420   28 IVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVgTLWIFILVANLIGLIPGFHSPTADLS 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 101 FTLTLALPLWLSFMIYGWinHTQHMFAHLVPLGTPGP-LMPFMVCIEITsniiRPGTLAVRLMANMVaghllltllgstg 179
Cdd:PRK13420  106 VTAALALLVFFSVHWFGI--RAEGLREYLKHYLSPSPfLLPFHLISEIT----RTLALAVRLFGNIM------------- 166

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1808499960 180 pSLSIWMJSLLLV----TQIMLLTLESAVAIIQSYVFAVLTTLY 219
Cdd:PRK13420  167 -SLELAALLVLLVagflVPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 71-222 1.56e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 46.90  E-value: 1.56e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  71 FLFITLFMFILFNNFLGLFPFIFTSSSHLTFTLTLALPLWLSFMIYGWINhtQHMFAHLVPLGTPGPLMPF-MVCIEITS 149
Cdd:MTH00087   53 VISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFsMLFVEIVS 130

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1808499960 150 NIIRPGTLAVRLMANMVAGHLLLTLLGSTGPSLSIWMjslllvtqIMLLTLESAVAIIQSYVFAVLTTLYSSE 222
Cdd:MTH00087  131 ELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLS--------ILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 26-215 1.63e-06

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 47.38  E-value: 1.63e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  26 LGLTLIPLSFWFLPSRTEILWNLVTTTLHKEFKTILgpQNHPGTTFLFI-TLFMFILFNNFLGLFPFIFTSSSHLTFTLT 104
Cdd:PRK13421   35 AGSALATRRLSLAPGRLQSVLELVVTTIDAQIRDTM--QTDPAPYRALIgTLFLFVLVANWSSLVPGVEPPTAHLETDAA 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960 105 LALPLWLSFMIYGWinHTQHMFAHLVPLGTPGPLmpfMVCIEITSNIIRPGTLAVRLMANMVAGHLLLtllgstGPSLSi 184
Cdd:PRK13421  113 LALIVFLATIYYGV--RARGVRGYLATFAEPTWV---MIPLNLVEQLTRTFSLIVRLFGNVMSGVFVI------GIVLS- 180

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1808499960 185 wmJSLLLVTqIMLLTLESAVAIIQSYVFAVL 215
Cdd:PRK13421  181 --LAGLLVP-IPLMALDLLTGAVQAYIFAVL 208
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 78-168 3.98e-04

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 39.87  E-value: 3.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1808499960  78 MFILFNNFLGL-FPFIFTSSSHLTFTLTLALPLWLSFMIYGWINHTQHMFAHLVPLGTPGPLMPFMVCIEITSNIIRPGT 156
Cdd:MTH00050   30 LFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVV 109

                          90
                  ....*....|..
gi 1808499960 157 LAVRLMANMVAG 168
Cdd:MTH00050  110 LILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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