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Conserved domains on  [gi|1807606648|gb|QHX99922|]
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cytochrome b (mitochondrion) [Tagasta indica]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 659.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  12 FKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  92 FICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 172 DNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLLCLINPYLL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 252 GDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQLIFWMMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1807606648 332 VVILLTWIGKRPVEDPYILTGQLLTLLYFLYFIMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 659.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  12 FKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  92 FICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 172 DNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLLCLINPYLL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 252 GDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQLIFWMMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1807606648 332 VVILLTWIGKRPVEDPYILTGQLLTLLYFLYFIMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
17-343 2.07e-116

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 343.70  E-value: 2.07e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  17 NSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFFICIY 96
Cdd:COG1290    25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  97 LHVGRGIYYGSfmYKN----TWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVD 172
Cdd:COG1290   105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 173 NATLNRFFTFH-FVLPFIIAAMAMIHLFFLHLSGSNNPLG----LNSNIEKIPFHPYFTFKDSITIISVTFMLTLLCLIN 247
Cdd:COG1290   183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 248 PylLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQLI 325
Cdd:COG1290   263 P--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340

                         330
                  ....*....|....*...
gi 1807606648 326 FWMMVTVVILLTWIGKRP 343
Cdd:COG1290   341 GVAFIVFFIVLTILGANP 358
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 7.45e-88

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 263.84  E-value: 7.45e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  10 PLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  90 MFFICIYLHVGRGIYYGSFM--YKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1807606648 168 GFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 1.76e-78

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 239.59  E-value: 1.76e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  19 LIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFFICIYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  99 VGRGIYYGSFMY--KNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVDNATL 176
Cdd:pfam00033  81 IFRGLYYGGFSYprELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1807606648 177 NRFFTFHFVLPFIIAAMAMIHLFFLHLSG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 231-314 5.05e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 52.11  E-value: 5.05e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 231 ITIISVTFMLTLLCLINPYLLGDPdnfipANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYN- 309
Cdd:TIGR01156  42 VVILGTIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEn 116


                  ....*....
gi 1807606648 310 ----KTPFR 314
Cdd:TIGR01156 117 vnkfQNPFR 125
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 659.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  12 FKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  92 FICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 172 DNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLLCLINPYLL 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 252 GDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQLIFWMMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1807606648 332 VVILLTWIGKRPVEDPYILTGQLLTLLYFLYFIMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00119
cytochrome b; Provisional
 1-353 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 589.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   1 MNKPFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWII 80
Cdd:MTH00119    1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  81 RTLHANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTN 160
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 161 LVQWIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFML 240
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 241 TLLCLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYP 320
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1807606648 321 MNQLIFWMMVTVVILLTWIGKRPVEDPYILTGQ 353
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQ 353
CYTB MTH00145
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 582.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   1 MNKPFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWII 80
Cdd:MTH00145    1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  81 RTLHANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTN 160
Cdd:MTH00145   81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 161 LVQWIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFML 240
Cdd:MTH00145  161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 241 TLLCLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYP 320
Cdd:MTH00145  241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1807606648 321 MNQLIFWMMVTVVILLTWIGKRPVEDPYILTGQLLTLLYFLYFIMNTHLSYLWDLMI 377
Cdd:MTH00145  321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
CYTB MTH00191
cytochrome b; Provisional
 5-353 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 577.64  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   5 FRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLH 84
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  85 ANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQW 164
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 165 IWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLLC 244
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 245 LINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQL 324
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340
                  ....*....|....*....|....*....
gi 1807606648 325 IFWMMVTVVILLTWIGKRPVEDPYILTGQ 353
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQ 349
CYTB MTH00131
cytochrome b; Provisional
 6-353 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 573.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   6 RLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHA 85
Cdd:MTH00131    5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  86 NGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWI 165
Cdd:MTH00131   85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 166 WGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLLCL 245
Cdd:MTH00131  165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 246 INPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQLI 325
Cdd:MTH00131  245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324

                         330       340
                  ....*....|....*....|....*...
gi 1807606648 326 FWMMVTVVILLTWIGKRPVEDPYILTGQ 353
Cdd:MTH00131  325 FWTLVADVLILTWIGGMPVEHPFIIIGQ 352
CYTB MTH00100
cytochrome b; Provisional
 4-353 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 573.89  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   4 PFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTL 83
Cdd:MTH00100    3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  84 HANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQ 163
Cdd:MTH00100   83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 164 WIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLL 243
Cdd:MTH00100  163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 244 CLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQ 323
Cdd:MTH00100  243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322

                         330       340       350
                  ....*....|....*....|....*....|
gi 1807606648 324 LIFWMMVTVVILLTWIGKRPVEDPYILTGQ 353
Cdd:MTH00100  323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQ 352
CYTB MTH00074
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 572.01  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   1 MNKPFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWII 80
Cdd:MTH00074    1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  81 RTLHANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTN 160
Cdd:MTH00074   81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 161 LVQWIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFML 240
Cdd:MTH00074  161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 241 TLLCLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYP 320
Cdd:MTH00074  241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1807606648 321 MNQLIFWMMVTVVILLTWIGKRPVEDPYILTGQLLTLLYFLYFIMNTHLSYLWD 374
Cdd:MTH00074  321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLE 374
CYTB MTH00016
cytochrome b; Validated
 1-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 568.92  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   1 MNKPFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWII 80
Cdd:MTH00016    1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  81 RTLHANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTN 160
Cdd:MTH00016   81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 161 LVQWIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFML 240
Cdd:MTH00016  161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 241 TLLCLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYP 320
Cdd:MTH00016  241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1807606648 321 MNQLIFWMMVTVVILLTWIGKRPVEDPYILTGQLLTLLYFLYFIMNTHLSYLWDLMIK 378
Cdd:MTH00016  321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
CYTB MTH00034
cytochrome b; Validated
 4-353 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 526.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   4 PFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTL 83
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  84 HANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQ 163
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 164 WIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLL 243
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 244 CLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQ 323
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350
                  ....*....|....*....|....*....|
gi 1807606648 324 LIFWMMVTVVILLTWIGKRPVEDPYILTGQ 353
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQ 352
CYTB MTH00224
cytochrome b; Provisional
 1-378 1.22e-178

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 501.37  E-value: 1.22e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   1 MNKPFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWII 80
Cdd:MTH00224    1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  81 RTLHANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTN 160
Cdd:MTH00224   81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 161 LVQWIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFML 240
Cdd:MTH00224  161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 241 TLLCLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYP 320
Cdd:MTH00224  241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1807606648 321 MNQLIFWMMVTVVILLTWIGKRPVEDPYILTGQLLTLLYFLYFIMNTHLSYLWDLMIK 378
Cdd:MTH00224  321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
CYTB MTH00022
cytochrome b; Validated
 4-353 1.10e-168

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 476.12  E-value: 1.10e-168
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   4 PFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTL 83
Cdd:MTH00022    2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  84 HANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQ 163
Cdd:MTH00022   82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 164 WIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLL 243
Cdd:MTH00022  162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 244 CLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQ 323
Cdd:MTH00022  242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321

                         330       340       350
                  ....*....|....*....|....*....|
gi 1807606648 324 LIFWMMVTVVILLTWIGKRPVEDPYILTGQ 353
Cdd:MTH00022  322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQ 351
CYTB MTH00053
cytochrome b; Provisional
 1-353 2.05e-166

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 470.34  E-value: 2.05e-166
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648   1 MNKPFRLKQPLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWII 80
Cdd:MTH00053    1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  81 RTLHANGASMFFICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTN 160
Cdd:MTH00053   81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 161 LVQWIWGGFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFML 240
Cdd:MTH00053  161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 241 TLLCLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYP 320
Cdd:MTH00053  241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1807606648 321 MNQLIFWMMVTVVILLTWIGKRPVEDPYILTGQ 353
Cdd:MTH00053  321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQ 353
CYTB MTH00033
cytochrome b; Provisional
 17-353 6.22e-128

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 372.73  E-value: 6.22e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  17 NSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFFICIY 96
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  97 LHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVDNATL 176
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 177 NRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIIsVTFMLTLLCLINPY---LLGD 253
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFL-ILFGVFVIIGIEPRietLLQD 251

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 254 PDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQLIFWMMVTVV 333
Cdd:MTH00033  252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331

                         330       340
                  ....*....|....*....|.
gi 1807606648 334 ILLTWIGKRPV-EDPYILTGQ 353
Cdd:MTH00033  332 IILTWIGSAPAgADPYVLIGR 352
CYTB MTH00086
cytochrome b; Provisional
 13-350 5.82e-121

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 353.86  E-value: 5.82e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  13 KIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFF 92
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  93 ICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVD 172
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 173 NATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIIsVTFMLTLLCLINPYLLG 252
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 253 DPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNktpFRGIQFYPMNQLIFWMMVTV 332
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVV 316

                         330
                  ....*....|....*...
gi 1807606648 333 VILLTWIGKRPVEDPYIL 350
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLF 334
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
17-343 2.07e-116

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 343.70  E-value: 2.07e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  17 NSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFFICIY 96
Cdd:COG1290    25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  97 LHVGRGIYYGSfmYKN----TWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVD 172
Cdd:COG1290   105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 173 NATLNRFFTFH-FVLPFIIAAMAMIHLFFLHLSGSNNPLG----LNSNIEKIPFHPYFTFKDSITIISVTFMLTLLCLIN 247
Cdd:COG1290   183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 248 PylLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQLI 325
Cdd:COG1290   263 P--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340

                         330
                  ....*....|....*...
gi 1807606648 326 FWMMVTVVILLTWIGKRP 343
Cdd:COG1290   341 GVAFIVFFIVLTILGANP 358
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 7.45e-88

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 263.84  E-value: 7.45e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  10 PLFKIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  90 MFFICIYLHVGRGIYYGSFM--YKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1807606648 168 GFAVDNATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 13-353 1.60e-82

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 255.68  E-value: 1.60e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  13 KIINNSLIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFF 92
Cdd:MTH00046    3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  93 ICIYLHVGRGIYYGSFMYKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVD 172
Cdd:MTH00046   83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 173 NATLNRFFTFHFVLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNI-EKIPFHPYFTFKDSITIISVTFMLTLLCLINPYLL 251
Cdd:MTH00046  163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 252 GDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIaLFLSVSILMIMPLYNKTPFRGIqfypMNQLIFWMMVT 331
Cdd:MTH00046  243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVS 317

                         330       340
                  ....*....|....*....|..
gi 1807606648 332 VVILLTWIGKRPVEDPYILTGQ 353
Cdd:MTH00046  318 LFFSLSYLGGCHPEYPYLLISQ 339
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 1.76e-78

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 239.59  E-value: 1.76e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  19 LIDLPTPTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFFICIYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  99 VGRGIYYGSFMY--KNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVDNATL 176
Cdd:pfam00033  81 IFRGLYYGGFSYprELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1807606648 177 NRFFTFHFVLPFIIAAMAMIHLFFLHLSG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 208-353 4.92e-47

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 157.04  E-value: 4.92e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 208 NPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLLCLINPYLLGDPDNFIPANPLITPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1807606648 288 KLGGVIALFLSVSILMIMPLYNKTPFRGiQFYPMNQLIFWMMVTVVILLTWIGKRPVEDPYILTGQ 353
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQ 145
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
89-254 1.85e-45

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 153.94  E-value: 1.85e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  89 SMFFICIYLHVGRGIYYGSFMY--KNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIW 166
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 167 GGFAVDNATLNRFFTFHF-VLPFIIAAMAMIHLFFLHLSGSNNPLGLNSNIEKIPFHPYFTFKDSITIISVTFMLTLLCL 245
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1807606648 246 INPYLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
259-353 2.22e-37

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 130.29  E-value: 2.22e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 259 PANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYNKTPFRGIQFYPMNQLIFWMMVTVVILLTW 338
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90
                  ....*....|....*
gi 1807606648 339 IGKRPVEDPYILTGQ 353
Cdd:pfam00032  81 LGKQPPTGPYTLLGQ 95
PRK03735 PRK03735
cytochrome b6; Provisional
 34-210 1.78e-35

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 129.45  E-value: 1.78e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  34 YGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFFICIYLHVGRGIYYGSFMYKN- 112
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 113 -TWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVDNATLNRFFTFH-FVLPFII 190
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170       180
                  ....*....|....*....|
gi 1807606648 191 AAMAMIHLFFLHLSGSNNPL 210
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 25-210 1.82e-30

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 115.97  E-value: 1.82e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648  25 PTNISLWWNYGSLLGLCLVIQIMTGLFLAMHYTPNIELAFSSMIHTCRDVNNGWIIRTLHANGASMFFICIYLHVGRGIY 104
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 105 YGSFM--YKNTWMIGTIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVQWIWGGFAVDNATLNRFFTF 182
Cdd:CHL00070  107 TGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170       180
                  ....*....|....*....|....*....
gi 1807606648 183 H-FVLPFIIAAMAMIHLFFLHLSGSNNPL 210
Cdd:CHL00070  187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 231-350 5.67e-10

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 57.50  E-value: 5.67e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 231 ITIISVTFMLTLLCLINPYLLGDPdnfipANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYN- 309
Cdd:COG5679    43 VVILGTIALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIEn 117

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1807606648 310 ----KTPFRgiqfYPMNQLIFwMMVTVVILLTWIGKR-PVEDPYIL 350
Cdd:COG5679   118 vnkfQNPFR----RPVATAVF-LFGTLVTLWLGIGAAlPIDKSLTL 158
petD CHL00058
cytochrome b6/f complex subunit IV
 231-314 7.36e-09

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 54.24  E-value: 7.36e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 231 ITIISVTFMLTLLCLINPYLLGDPdnfipANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPL--- 307
Cdd:CHL00058   42 VVILGTIACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFlen 116


                  ....*....
gi 1807606648 308 YNK--TPFR 314
Cdd:CHL00058  117 VNKfqNPFR 125
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 231-314 5.05e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 52.11  E-value: 5.05e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1807606648 231 ITIISVTFMLTLLCLINPYLLGDPdnfipANPLITPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSVSILMIMPLYN- 309
Cdd:TIGR01156  42 VVILGTIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEn 116


                  ....*....
gi 1807606648 310 ----KTPFR 314
Cdd:TIGR01156 117 vnkfQNPFR 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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