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Conserved domains on  [gi|1803110733|ref|WP_161654205|]
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hypothetical protein [Burkholderia thailandensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5350 super family cl44221
Predicted protein tyrosine phosphatase [General function prediction only];
41-128 5.36e-03

Predicted protein tyrosine phosphatase [General function prediction only];


The actual alignment was detected with superfamily member COG5350:

Pssm-ID: 444131  Cd Length: 165  Bit Score: 35.60  E-value: 5.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1803110733  41 AVISVIAPERSPASLNGFA--HLLRLSFADVDFLSPNLstksrdklVHAfTPEQAQSIRSFVEALPIEIVSVVaHCEGGY 118
Cdd:COG5350    23 HVLSLLDPGTPVPRPASIAahRHLFLRFNDIIEPMPGL--------ILP-TEEHVEALLAFGRDWDREAPLLV-HCHAGI 92

                          90
                  ....*....|
gi 1803110733 119 SRSCAIALAL 128
Cdd:COG5350    93 SRSTAAALIA 102
 
Name Accession Description Interval E-value
COG5350 COG5350
Predicted protein tyrosine phosphatase [General function prediction only];
41-128 5.36e-03

Predicted protein tyrosine phosphatase [General function prediction only];


Pssm-ID: 444131  Cd Length: 165  Bit Score: 35.60  E-value: 5.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1803110733  41 AVISVIAPERSPASLNGFA--HLLRLSFADVDFLSPNLstksrdklVHAfTPEQAQSIRSFVEALPIEIVSVVaHCEGGY 118
Cdd:COG5350    23 HVLSLLDPGTPVPRPASIAahRHLFLRFNDIIEPMPGL--------ILP-TEEHVEALLAFGRDWDREAPLLV-HCHAGI 92

                          90
                  ....*....|
gi 1803110733 119 SRSCAIALAL 128
Cdd:COG5350    93 SRSTAAALIA 102
 
Name Accession Description Interval E-value
COG5350 COG5350
Predicted protein tyrosine phosphatase [General function prediction only];
41-128 5.36e-03

Predicted protein tyrosine phosphatase [General function prediction only];


Pssm-ID: 444131  Cd Length: 165  Bit Score: 35.60  E-value: 5.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1803110733  41 AVISVIAPERSPASLNGFA--HLLRLSFADVDFLSPNLstksrdklVHAfTPEQAQSIRSFVEALPIEIVSVVaHCEGGY 118
Cdd:COG5350    23 HVLSLLDPGTPVPRPASIAahRHLFLRFNDIIEPMPGL--------ILP-TEEHVEALLAFGRDWDREAPLLV-HCHAGI 92

                          90
                  ....*....|
gi 1803110733 119 SRSCAIALAL 128
Cdd:COG5350    93 SRSTAAALIA 102
CDC14 COG2453
Protein-tyrosine phosphatase [Signal transduction mechanisms];
86-149 6.14e-03

Protein-tyrosine phosphatase [Signal transduction mechanisms];


Pssm-ID: 441989 [Multi-domain]  Cd Length: 140  Bit Score: 35.33  E-value: 6.14e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1803110733  86 HAFTPEQAQSIRSFVEALPIEIVSVVAHCEGGYSRSCAIALALHRLYGYQAE--IEHLSHANPSIV 149
Cdd:COG2453    59 GAPDDEQLQEAVDFIDEALREGKKVLVHCRGGIGRTGTVAAAYLVLLGLSAEeaLARVRAARPGAV 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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