|
Name |
Accession |
Description |
Interval |
E-value |
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
399-879 |
6.58e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.58 E-value: 6.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 399 LLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLkqhlQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIeqyk 478
Cdd:TIGR04523 177 LLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSL----ESQISELKKQNNQLKDNIEKKQQEINEKTTEI---- 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 479 fdSKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRNLLKQYELMRADS 558
Cdd:TIGR04523 249 --SNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEI 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 559 DAKLKEleheqhlahqhHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHA 638
Cdd:TIGR04523 327 QNQISQ-----------NNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIND 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 639 LgitNSELQNQlnvleftHKEKTAFDS--KTLTLTKQQLEQTQFDLSLTQEQLatfKQQNQSLTDKLMASETQLNHLQQS 716
Cdd:TIGR04523 396 L---ESKIQNQ-------EKLNQQKDEqiKKLQQEKELLEKEIERLKETIIKN---NSEIKDLTNQDSVKELIIKNLDNT 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 717 DEnltQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKT----- 791
Cdd:TIGR04523 463 RE---SLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKekesk 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 792 ---------------NWENLNTEhnllQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAEL------NEIQITNL 850
Cdd:TIGR04523 540 isdledelnkddfelKKENLEKE----IDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLikeieeKEKKISSL 615
|
490 500 510
....*....|....*....|....*....|...
gi 1802595060 851 ----NEANAQYQDLLSAYELLQSNHNKLKQELQ 879
Cdd:TIGR04523 616 ekelEKAKKENEKLSSIIKNIKSKKNKLKQEVK 648
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
412-787 |
8.03e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.15 E-value: 8.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 412 NELQQKLFKSQNNsllLARLE---EENRTLKQHLQNNLPEANQLNFvLEKQLEQLQqdKHSLTLQIEQYKfdskKHQEQL 488
Cdd:TIGR02168 175 KETERKLERTREN---LDRLEdilNELERQLKSLERQAEKAERYKE-LKAELRELE--LALLVLRLEELR----EELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 489 alipslRSEINSLETEvisLKQTNQRLSLIERENNFLKTEIKQLREtKLNDENTKYRNLLkqyelmradsdAKLKELEHE 568
Cdd:TIGR02168 245 ------QEELKEAEEE---LEELTAELQELEEKLEELRLEVSELEE-EIEELQKELYALA-----------NEISRLEQQ 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 569 QhlahQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQN 648
Cdd:TIGR02168 304 K----QILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 649 QLNvlefthKEKTAFDSKTLTLTKQQLEQTQFDLSLTQ--EQLATFKQQNQSLTDKLMASETQLNH--LQQSDENLTQLQ 724
Cdd:TIGR02168 380 QLE------TLRSKVAQLELQIASLNNEIERLEARLERleDRRERLQQEIEELLKKLEEAELKELQaeLEELEEELEELQ 453
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1802595060 725 TQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFK---QNNEELTDKCSNIQNELHDLN 787
Cdd:TIGR02168 454 EELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLErlqENLEGFSEGVKALLKNQSGLS 519
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
612-946 |
1.72e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 1.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 612 EQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTHKEkTAFDSKTLTLTKQQLEQTQFDLSLT----QE 687
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISA-LRKDLARLEAEVEQLEERIAQLSKEltelEA 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 688 QLATFKQQNQSLTDKLMASETQLNHLQQSdenLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQ 767
Cdd:TIGR02168 762 EIEELEERLEEAEEELAEAEAEIEELEAQ---IEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATER 838
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 768 NNEELTDKCSNIQNELhdlnrvktnwENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQi 847
Cdd:TIGR02168 839 RLEDLEEQIEELSEDI----------ESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELE- 907
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 848 TNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQ-----SLSQTHAELTQLQAAYNNLQat 922
Cdd:TIGR02168 908 SKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALEnkiedDEEEARRRLKRLENKIKELG-- 985
|
330 340
....*....|....*....|....
gi 1802595060 923 pPVSDELLEQFNQVQLEKQRLLQQ 946
Cdd:TIGR02168 986 -PVNLAAIEEYEELKERYDFLTAQ 1008
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
393-922 |
2.20e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 61.61 E-value: 2.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 393 LQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTL 472
Cdd:TIGR02168 300 LEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEE 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 473 QIEQYKFDSKKHQEQLAlipSLRSEINSLETEVISLKQTNQRLS------LIERENNFLKTEIKQLRETK--LNDENTKY 544
Cdd:TIGR02168 380 QLETLRSKVAQLELQIA---SLNNEIERLEARLERLEDRRERLQqeieelLKKLEEAELKELQAELEELEeeLEELQEEL 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 545 RNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQ--LAQLQRHNEALVKELDQVKATNFELGL----------AAQGFE 612
Cdd:TIGR02168 457 ERLEEALEELREELEEAEQALDAAERELAQLQARLdsLERLQENLEGFSEGVKALLKNQSGLSGilgvlselisVDEGYE 536
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 613 Q----------QKVVLEQKNSSLLA----------------------------SLQAAEENVHALGITNS---------- 644
Cdd:TIGR02168 537 AaieaalggrlQAVVVENLNAAKKAiaflkqnelgrvtflpldsikgteiqgnDREILKNIEGFLGVAKDlvkfdpklrk 616
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 645 -------------ELQNQLNVLEFTHKEKTAF--DSKTLT----LTKQQLEQTQFDLSLTQE------QLATFKQQNQSL 699
Cdd:TIGR02168 617 alsyllggvlvvdDLDNALELAKKLRPGYRIVtlDGDLVRpggvITGGSAKTNSSILERRREieeleeKIEELEEKIAEL 696
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 700 TDKLMASETQLNHLQQSDENL----TQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDK 775
Cdd:TIGR02168 697 EKALAELRKELEELEEELEQLrkelEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEE 776
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 776 CSNIQNELHDLNRV-----------KTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLA-------QIQAEHELLQESYNK 837
Cdd:TIGR02168 777 LAEAEAEIEELEAQieqlkeelkalREALDELRAELTLLNEEAANLRERLESLERRIAaterrleDLEEQIEELSEDIES 856
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 838 VKAELNEIQiTNLNEANAQYQDLLSAYELLQSNHNKLKQELQVL----NQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQ 913
Cdd:TIGR02168 857 LAAEIEELE-ELIEELESELEALLNERASLEEALALLRSELEELseelRELESKRSELRRELEELREKLAQLELRLEGLE 935
|
....*....
gi 1802595060 914 AAYNNLQAT 922
Cdd:TIGR02168 936 VRIDNLQER 944
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
456-767 |
4.18e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 4.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 456 LEKQLEQLQQDK------HSLTLQIEQYKfdskkHQEQLALIPSLRSEINSLETEvisLKQTNQRLSLIERENNFLKTEI 529
Cdd:COG1196 198 LERQLEPLERQAekaeryRELKEELKELE-----AELLLLKLRELEAELEELEAE---LEELEAELEELEAELAELEAEL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 530 KQLREtKLNDENTKYRNLLKQYELmradSDAKLKELEHEQhlahQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQ 609
Cdd:COG1196 270 EELRL-ELEELELELEEAQAEEYE----LLAELARLEQDI----ARLEERRRELEERLEELEEELAELEEELEELEEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 610 GFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQL 689
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1802595060 690 ATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQ 767
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
508-833 |
1.13e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.18 E-value: 1.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 508 LKQTNQ---RLSLIEREnnfLKTEIKQL---RETKLndentKYRNLLKQYELMRADSDA-KLKELEHEQHLA---HQHHQ 577
Cdd:COG1196 181 LEATEEnleRLEDILGE---LERQLEPLerqAEKAE-----RYRELKEELKELEAELLLlKLRELEAELEELeaeLEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 578 EQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTH 657
Cdd:COG1196 253 AELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 658 KEktafDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQ-NQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNK 736
Cdd:COG1196 333 EE----LEEELEELEEELEEAEEELEEAEAELAEAEEAlLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEA 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 737 LQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELtdkcsniQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQH 816
Cdd:COG1196 409 EEALLERLERLEEELEELEEALAELEEEEEEEEEAL-------EEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
330
....*....|....*..
gi 1802595060 817 EHSNLAQIQAEHELLQE 833
Cdd:COG1196 482 LLEELAEAAARLLLLLE 498
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
359-654 |
1.43e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.18 E-value: 1.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 359 LQEQLDKALKHnAALQIQLEE---QLAKpLQYDQspvLQERIELLQNQNTNLTQELNELQQKLfksqnnSLLLARLEEEN 435
Cdd:COG1196 205 LERQAEKAERY-RELKEELKEleaELLL-LKLRE---LEAELEELEAELEELEAELEELEAEL------AELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 436 RTLkQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYkfdskkhQEQLAlipSLRSEINSLETEVISLKQTNQRL 515
Cdd:COG1196 274 LEL-EELELELEEAQAEEYELLAELARLEQDIARLEERRREL-------EERLE---ELEEELAELEEELEELEEELEEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 516 SLIEREnnflKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQHlAHQHHQEQLAQLQRHNEALVKELD 595
Cdd:COG1196 343 EEELEE----AEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR-AAAELAAQLEELEEAEEALLERLE 417
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1802595060 596 QVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLE 654
Cdd:COG1196 418 RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
356-965 |
4.00e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 57.67 E-value: 4.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 356 MTLLQEQLDKALKHNAALQIQLEEQLAKPLQY--------DQSPVLQERIELLQNQNTNLTQELNELQQKLF-KSQNNSL 426
Cdd:TIGR00618 147 VLLPQGEFAQFLKAKSKEKKELLMNLFPLDQYtqlalmefAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHeRKQVLEK 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 427 LLARLEEENRTLKQHLQ--NNLPEANQLNFVLEKQLEQLQQDKHSLTLQI-----EQYKFDSKKHQEQLALIPSLRSEIN 499
Cdd:TIGR00618 227 ELKHLREALQQTQQSHAylTQKREAQEEQLKKQQLLKQLRARIEELRAQEavleeTQERINRARKAAPLAAHIKAVTQIE 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 500 SLETEVISLKQTNQRlsliERENNFLKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKELEH-EQHLAHQHHQE 578
Cdd:TIGR00618 307 QQAQRIHTELQSKMR----SRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREIsCQQHTLTQHIH 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 579 QLAQLQRHNEALVKELDQVKATNFELgLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTHK 658
Cdd:TIGR00618 383 TLQQQKTTLTQKLQSLCKELDILQRE-QATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 659 EKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLN-HLQQSDEN------LTQLQTQHELLQ 731
Cdd:TIGR00618 462 QESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNpARQDIDNPgpltrrMQRGEQTYAQLE 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 732 ESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNrvktNWENLNTEHNLLQDKYAQQK 811
Cdd:TIGR00618 542 TSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQ----DLTEKLSEAEDMLACEQHAL 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 812 EQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLSAYEL--LQSNHNKLKQELQVLNQVNLEKQ 889
Cdd:TIGR00618 618 LRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKelLASRQLALQKMQSEKEQLTYWKE 697
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1802595060 890 QLAQK---LHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFNELNSSQT 965
Cdd:TIGR00618 698 MLAQCqtlLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQT 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
722-975 |
8.82e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 8.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 722 QLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELhdlnrvktnwENLNTEHN 801
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL----------ARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 802 LLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQiTNLNEANAQYQDLLSAYELLQSNHNKLKQELQVL 881
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAE-EELEEAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 882 NQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQAtppvsdELLEQFNQVQLEKQRLLQQNLALVHELQYFNELN 961
Cdd:COG1196 385 AEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELE------ELEEALAELEEEEEEEEEALEEAAEEEAELEEEE 458
|
250
....*....|....
gi 1802595060 962 SSQTHEIKTKQDET 975
Cdd:COG1196 459 EALLELLAELLEEA 472
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
355-861 |
1.34e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.08 E-value: 1.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 355 EMTLLQEQLDKALKHNAALQIQLEEQLAKPL----QYDQSPVlqERIELLQNQNTNLTQELNELQQKLfksQNNSLLLAR 430
Cdd:COG4913 296 ELEELRAELARLEAELERLEARLDALREELDeleaQIRGNGG--DRLEQLEREIERLERELEERERRR---ARLEALLAA 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 431 LEEENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQykfdskkHQEQLAlipSLRSEINSLET------- 503
Cdd:COG4913 371 LGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRD-------LRRELR---ELEAEIASLERrksnipa 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 504 ------------------------EVISLKQT-------------NQRLSLIERENNFlkteiKQLREtKLNDENT---- 542
Cdd:COG4913 441 rllalrdalaealgldeaelpfvgELIEVRPEeerwrgaiervlgGFALTLLVPPEHY-----AAALR-WVNRLHLrgrl 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 543 ---KYRNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLA------------QLQRHNEALVKELdQVKA--TNFELG 605
Cdd:COG4913 515 vyeRVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELGrrfdyvcvdspeELRRHPRAITRAG-QVKGngTRHEKD 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 606 laAQGFEQQKVVLEQKNSSLLASLQA----AEENVHALGITNSELQNQLNVLEfthKEKTAFdsktltltkQQLEQTQFD 681
Cdd:COG4913 594 --DRRRIRSRYVLGFDNRAKLAALEAelaeLEEELAEAEERLEALEAELDALQ---ERREAL---------QRLAEYSWD 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 682 LsltqeqlatfkQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQ 761
Cdd:COG4913 660 E-----------IDVASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEE 728
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 762 LALFKQNNEELTDKCSNIQNELHDlnrvkTNWENLNTEhNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKV-KA 840
Cdd:COG4913 729 LDELQDRLEAAEDLARLELRALLE-----ERFAAALGD-AVERELRENLEERIDALRARLNRAEEELERAMRAFNREwPA 802
|
570 580
....*....|....*....|.
gi 1802595060 841 ELNEIQITnlNEANAQYQDLL 861
Cdd:COG4913 803 ETADLDAD--LESLPEYLALL 821
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
392-790 |
1.50e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.84 E-value: 1.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 392 VLQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKqhlqnnlpeANQLNfVLEKQLEQLQQDKHSLT 471
Cdd:TIGR02169 181 EVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYEL---------LKEKE-ALERQKEAIERQLASLE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 472 LQIEQYKFdskkhqeqlaLIPSLRSEINSLEtevISLKQTNQRLS-LIERENNFLKTEIkqlRETKLNDENTKYRNLLKQ 550
Cdd:TIGR02169 251 EELEKLTE----------EISELEKRLEEIE---QLLEELNKKIKdLGEEEQLRVKEKI---GELEAEIASLERSIAEKE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 551 YELMRADSD-AKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELglaaqgfEQQKVVLEQKNSSLLASL 629
Cdd:TIGR02169 315 RELEDAEERlAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDL-------RAELEEVDKEFAETRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 630 QAAEENVHALGITNSELQNQLNVLEFTHKEKTafdsktltltkQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQ 709
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELQRLS-----------EELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWK 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 710 LnhlQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRV 789
Cdd:TIGR02169 457 L---EQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSV 533
|
.
gi 1802595060 790 K 790
Cdd:TIGR02169 534 G 534
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
380-741 |
1.68e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.46 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 380 QLAKPLQYDQSPVLQERIELLQNQNTNLTQELNELQQKLFKsqnnslLLARLEEENRTLKQhLQNNLPEANQLNFVLEKQ 459
Cdd:TIGR02169 666 ILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDE------LSQELSDASRKIGE-IEKEIEQLEQEEEKLKER 738
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 460 LEQLQQDKHSLTLQIEQYKfDSKKHQEqlALIPSLRSEINSLETEVISLKQ--TNQRLSLIERENNFLKTEIKQLR---- 533
Cdd:TIGR02169 739 LEELEEDLSSLEQEIENVK-SELKELE--ARIEELEEDLHKLEEALNDLEArlSHSRIPEIQAELSKLEEEVSRIEarlr 815
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 534 --ETKLNDENTKY---RNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHnEALVKELDQVKAtnfelGLAA 608
Cdd:TIGR02169 816 eiEQKLNRLTLEKeylEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEEL-EAALRDLESRLG-----DLKK 889
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 609 Q--GFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEqtqfdLSLTQ 686
Cdd:TIGR02169 890 ErdELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAE-----LQRVE 964
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1802595060 687 EQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEA 741
Cdd:TIGR02169 965 EEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
561-920 |
3.25e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.68 E-value: 3.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 561 KLKELEHEQHLAHQHHQEQLAQLqrhnEALVKELD--------QVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAA 632
Cdd:TIGR02168 169 KYKERRKETERKLERTRENLDRL----EDILNELErqlkslerQAEKAERYKELKAELRELELALLVLRLEELREELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 633 EENVHALGITNSELQNQLNVLEFTHKEKTAFDSKTltltKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLnh 712
Cdd:TIGR02168 245 QEELKEAEEELEELTAELQELEEKLEELRLEVSEL----EEEIEELQKELYALANEISRLEQQKQILRERLANLERQL-- 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 713 lQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKcsniqnelhdlnrvktn 792
Cdd:TIGR02168 319 -EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQ----------------- 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 793 WENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESynkVKAELNEIQITNLNEANAQYQDLLSAYELLQSNHN 872
Cdd:TIGR02168 381 LETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQE---IEELLKKLEEAELKELQAELEELEEELEELQEELE 457
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1802595060 873 KLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQ 920
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFS 505
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
359-739 |
3.31e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.68 E-value: 3.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 359 LQEQLDKALKHNAALQIQLEEqlakplqydqspvLQERIELLQNQNTNLTQELNELQQKLfKSQNNSLLLARLEEENRTL 438
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKALAE-------------LRKELEELEEELEQLRKELEELSRQI-SALRKDLARLEAEVEQLEE 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 439 K-QHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLAlipSLRSEINSLETEV----ISLKQTNQ 513
Cdd:TIGR02168 748 RiAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK---ALREALDELRAELtllnEEAANLRE 824
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 514 RLSLIERENNFLKTEIKQLRETKlndentkyRNLLKQYELMrADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKE 593
Cdd:TIGR02168 825 RLESLERRIAATERRLEDLEEQI--------EELSEDIESL-AAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 594 LDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVhalgitnSELQNQLNVLEfthkektafdSKTLTLTKQ 673
Cdd:TIGR02168 896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI-------DNLQERLSEEY----------SLTLEEAEA 958
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1802595060 674 QLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQlqtQHELLQESYNKLQD 739
Cdd:TIGR02168 959 LENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTA---QKEDLTEAKETLEE 1021
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
361-638 |
4.83e-07 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 54.14 E-value: 4.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 361 EQLDKALKHNAALQIQLEEqLAKPLQYDQSPVL---QERIELLQNQNTNLTqELNELQQKLfksqnnSLLLARLEEENRT 437
Cdd:PLN02939 114 EQQTNSKDGEQLSDFQLED-LVGMIQNAEKNILllnQARLQALEDLEKILT-EKEALQGKI------NILEMRLSETDAR 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 438 LKQhlqnnlpeANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIP----SLRSEINSLETEVISLKQTNQ 513
Cdd:PLN02939 186 IKL--------AAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKeenmLLKDDIQFLKAELIEVAETEE 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 514 RLSLIERENNFLKTEIKQLrETKLNDENTKYRNL--LKQYELMradsdAKLKELEHEQHLAHQHHQEQLAQLQRHNEaLV 591
Cdd:PLN02939 258 RVFKLEKERSLLDASLREL-ESKFIVAQEDVSKLspLQYDCWW-----EKVENLQDLLDRATNQVEKAALVLDQNQD-LR 330
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1802595060 592 KELDQVKATNFELGLAAqgFEQQKV-VLEQKNSSLLASLQAAEENVHA 638
Cdd:PLN02939 331 DKVDKLEASLKEANVSK--FSSYKVeLLQQKLKLLEERLQASDHEIHS 376
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
671-999 |
6.18e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.49 E-value: 6.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 671 TKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQ 750
Cdd:TIGR04523 164 LKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 751 AQNELDAAHQQLALFKQNNEELTDKCSNIQNELH-----------DLNRVKTNWENLNTE-----HNLLQDKYAQQKEQM 814
Cdd:TIGR04523 244 KTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEqnnkkikelekQLNQLKSEISDLNNQkeqdwNKELKSELKNQEKKL 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 815 QHEHSNLAQIQAEHELLQESYNKVKAELNEIQITN------LNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEK 888
Cdd:TIGR04523 324 EEIQNQISQNNKIISQLNEQISQLKKELTNSESENsekqreLEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQ 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 889 QQLAQKLHNTHQSLSQthaELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFNELNSSQTHEI 968
Cdd:TIGR04523 404 EKLNQQKDEQIKKLQQ---EKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKI 480
|
330 340 350
....*....|....*....|....*....|.
gi 1802595060 969 KTKQDETVKEVIIVEKEIPVLPEKKPRLKKR 999
Cdd:TIGR04523 481 KQNLEQKQKELKSKEKELKKLNEEKKELEEK 511
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
393-972 |
8.54e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.20 E-value: 8.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 393 LQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLLA----RLEEENRTLKQHLQNNLPEANQLNFVLEKQLEqlqqdkh 468
Cdd:pfam15921 94 LNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMAdirrRESQSQEDLRNQLQNTVHELEAAKCLKEDMLE------- 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 469 SLTLQIEQYKFDSKKHQEQLALIPSLR-----------SEINSLETevISLKQTNQRLSLIEREnnfLKTEIKQLRETKL 537
Cdd:pfam15921 167 DSNTQIEQLRKMMLSHEGVLQEIRSILvdfeeasgkkiYEHDSMST--MHFRSLGSAISKILRE---LDTEISYLKGRIF 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 538 NDENtkyrnllkQYELMRADSDAKLKeleheqhLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQgfEQQKVV 617
Cdd:pfam15921 242 PVED--------QLEALKSESQNKIE-------LLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQ--SQLEII 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 618 LEQ---KNSSLLASLQAAEENVhalgitnSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQL-----EQTQF--------- 680
Cdd:pfam15921 305 QEQarnQNSMYMRQLSDLESTV-------SQLRSELREAKRMYEDKIEELEKQLVLANSELteartERDQFsqesgnldd 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 681 -------DLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQS-DENLTQLQTQHELLQESYNKLQDEANHtQQQFHQAQ 752
Cdd:pfam15921 378 qlqkllaDLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRElDDRNMEVQRLEALLKAMKSECQGQMER-QMAAIQGK 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 753 NE----LDAAHQQL----ALFKQNNEELTDKCSNIQNELHDLNRVKTNW-------ENLNTEHNLLQDKYAQQKEQMQH- 816
Cdd:pfam15921 457 NEslekVSSLTAQLestkEMLRKVVEELTAKKMTLESSERTVSDLTASLqekeraiEATNAEITKLRSRVDLKLQELQHl 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 817 ----EHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLSAYEL----LQSNHNKLKQELQvlnQVNLEK 888
Cdd:pfam15921 537 knegDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVekaqLEKEINDRRLELQ---EFKILK 613
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 889 QQLAQKLHNTHQSLSQTHAELTQL-QAAYNNLQATPPVSDELLEQFNQVQLEKQRLlqQNLALVHELQYFNELNSSQTHE 967
Cdd:pfam15921 614 DKKDAKIRELEARVSDLELEKVKLvNAGSERLRAVKDIKQERDQLLNEVKTSRNEL--NSLSEDYEVLKRNFRNKSEEME 691
|
....*
gi 1802595060 968 IKTKQ 972
Cdd:pfam15921 692 TTTNK 696
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
653-915 |
1.14e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 52.71 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 653 LEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNqsltdklmasetqlnhlqqsdeNLTQLQTQHELLQE 732
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKN----------------------GLVDLSEEAKLLLQ 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 733 SYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKcSNIQNelhdlnrvktnwenLNTEHNLLQDKYAQQKE 812
Cdd:COG3206 220 QLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQS-PVIQQ--------------LRAQLAELEAELAELSA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 813 QMQHEHSNLAQIQAEhelLQESYNKVKAELNEIqitnLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLA 892
Cdd:COG3206 285 RYTPNHPDVIALRAQ---IAALRAQLQQEAQRI----LASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLE 357
|
250 260
....*....|....*....|...
gi 1802595060 893 QKLHNTHQSLSQTHAELTQLQAA 915
Cdd:COG3206 358 REVEVARELYESLLQRLEEARLA 380
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
360-886 |
1.89e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.25 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 360 QEQLDKALKHNAALQIQLEEQLAKplqydqspvLQERIELLQNQNTNLTQELNELQQKlfksqnnsllLARLEEENRTLK 439
Cdd:COG1196 297 LARLEQDIARLEERRRELEERLEE---------LEEELAELEEELEELEEELEELEEE----------LEEAEEELEEAE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 440 QHLQNnlpeanqlnfvLEKQLEQLQQDKHSLTLQIEQYKfdskkhQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIE 519
Cdd:COG1196 358 AELAE-----------AEEALLEAEAELAEAEEELEELA------EELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 520 RENNFLKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKA 599
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 600 TNFElGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTHKEKTAfdsktLTLTKQQLEQTQ 679
Cdd:COG1196 501 ADYE-GFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAA-----IEYLKAAKAGRA 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 680 FDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQ---HELLQESYNKLQDEANHTQQQFHQAQNELD 756
Cdd:COG1196 575 TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTllgRTLVAARLEAALRRAVTLAGRLREVTLEGE 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 757 AAHQQLALFKQNNEELTDKCSNIQNELHDLN-RVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESY 835
Cdd:COG1196 655 GGSAGGSLTGGSRRELLAALLEAEAELEELAeRLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAER 734
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 1802595060 836 NKVKAELNEIQITNLNEANAQYQDLLSAYElLQSNHNKLKQELQVLNQVNL 886
Cdd:COG1196 735 EELLEELLEEEELLEEEALEELPEPPDLEE-LERELERLEREIEALGPVNL 784
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
409-884 |
2.39e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.69 E-value: 2.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 409 QELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQNnlpeanqlnfvLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQeql 488
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEE-----------LEAELEELREELEKLEKLLQLLPLYQELEA--- 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 489 alipsLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLREtklndentkyrnllKQYELMRADSDAKLKELEhE 568
Cdd:COG4717 137 -----LEAELAELPERLEELEERLEELRELEEELEELEAELAELQE--------------ELEELLEQLSLATEEELQ-D 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 569 QHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAeenVHALGITNSELQN 648
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLA---LLGLGGSLLSLIL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 649 QLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASET-QLNHLQQSDENLTQLQTQH 727
Cdd:COG4717 274 TIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDlSPEELLELLDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 728 ELLQESYNKLQDEANHTQQQ--FHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEHNLlqd 805
Cdd:COG4717 354 REAEELEEELQLEELEQEIAalLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEEL--- 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 806 kyaqqKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQI-TNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQV 884
Cdd:COG4717 431 -----EEELEELEEELEELEEELEELREELAELEAELEQLEEdGELAELLQELEELKAELRELAEEWAALKLALELLEEA 505
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
707-1029 |
3.21e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 3.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 707 ETQLNhLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQqFHQAQNELDAAHQQLALfkqnneeltdkcsniqnelhdl 786
Cdd:TIGR02168 176 ETERK-LERTRENLDRLEDILNELERQLKSLERQAEKAER-YKELKAELRELELALLV---------------------- 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 787 nrvkTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQiTNLNEANAQYQDLLSAYEL 866
Cdd:TIGR02168 232 ----LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQ-KELYALANEISRLEQQKQI 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 867 LQSNHNKLKQELQvlnQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQ 946
Cdd:TIGR02168 307 LRERLANLERQLE---ELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLET 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 947 NLALVHELQYFNELNSSQTHEIKTKQDETVKEVIIVEKEIPVLPEKKPRLKKRDIVIENKEDALGKLSKKERIQAYAERL 1026
Cdd:TIGR02168 384 LRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEAL 463
|
...
gi 1802595060 1027 AKI 1029
Cdd:TIGR02168 464 EEL 466
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
645-920 |
3.55e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 51.50 E-value: 3.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 645 ELQNQLNVLEfthKEKTAFDSKTLTLTkQQLEQTQFDLSLTQEQLATFKQ-QNQSLTDKLMASETQLNHLQQSDENLTQL 723
Cdd:PRK04863 841 QLNRRRVELE---RALADHESQEQQQR-SQLEQAKEGLSALNRLLPRLNLlADETLADRVEEIREQLDEAEEAKRFVQQH 916
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 724 QTQHELLQESYNKLQDEanhtQQQFHQAQNELDAAHQQLALFKQNNEELTDkcsniqnelhdLNRVKTNWenlntehnll 803
Cdd:PRK04863 917 GNALAQLEPIVSVLQSD----PEQFEQLKQDYQQAQQTQRDAKQQAFALTE-----------VVQRRAHF---------- 971
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 804 qdKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQiTNLNEANAQYQDLLSAYELLQSNHNKLKQELQVL-- 881
Cdd:PRK04863 972 --SYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQ-AQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLgv 1048
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1802595060 882 -------NQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQ 920
Cdd:PRK04863 1049 padsgaeERARARRDELHARLSANRSRRNQLEKQLTFCEAEMDNLT 1094
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
612-775 |
3.88e-06 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 50.46 E-value: 3.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 612 EQQKVVLEQKN--SSLLASLQAAEENVHALGITNSELQNQLNVLEfthKEKTAFDSKTLTLTKQQLEQTQfdlSLTQEQL 689
Cdd:PRK11637 58 AKEKSVRQQQQqrASLLAQLKKQEEAISQASRKLRETQNTLNQLN---KQIDELNASIAKLEQQQAAQER---LLAAQLD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 690 ATFKQ-QNQSLTDKLMASETQ-------------------LNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFH 749
Cdd:PRK11637 132 AAFRQgEHTGLQLILSGEESQrgerilayfgylnqarqetIAELKQTREELAAQKAELEEKQSQQKTLLYEQQAQQQKLE 211
|
170 180 190
....*....|....*....|....*....|....*..
gi 1802595060 750 QAQNE-----------LDAAHQQLALFKQNNEELTDK 775
Cdd:PRK11637 212 QARNErkktltglessLQKDQQQLSELRANESRLRDS 248
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
554-972 |
2.06e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 48.75 E-value: 2.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 554 MRADSDAKLKELEHEQHLAHQHHQEQLAQLQR------HNEALVKELDQV--KATNFELGLAAQGFEQQKVVLEQKNSSL 625
Cdd:PRK11281 43 AQLDALNKQKLLEAEDKLVQQDLEQTLALLDKidrqkeETEQLKQQLAQApaKLRQAQAELEALKDDNDEETRETLSTLS 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 626 LASLQAAEENvhalgiTNSELQNqlnvlefTHKEKTAFDSKTLTLtKQQLEQTQFDLSLTQEQLatfkQQNQSLTDKLMA 705
Cdd:PRK11281 123 LRQLESRLAQ------TLDQLQN-------AQNDLAEYNSQLVSL-QTQPERAQAALYANSQRL----QQIRNLLKGGKV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 706 SETQLNHLQQsdenlTQLQTQHELL--QESYNKLQDEANHTQQQFHQAQNELDAAHQQLalfkqnneeltdkcsnIQNEL 783
Cdd:PRK11281 185 GGKALRPSQR-----VLLQAEQALLnaQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQR----------------LEHQL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 784 HDLNRVktnwenLNTEHNLLQDKYAQQKEQMQhehsNLAQIQAEHELLQESynKVKAELNEIQITNLNEANAQYQDLLSA 863
Cdd:PRK11281 244 QLLQEA------INSKRLTLSEKTVQEAQSQD----EAARIQANPLVAQEL--EINLQLSQRLLKATEKLNTLTQQNLRV 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 864 YE----LLQSNHNkLKQELQVL------------NQVNLEKQQLAQKLHNT------HQ-SLSQTHAELTQLQAAYNNLQ 920
Cdd:PRK11281 312 KNwldrLTQSERN-IKEQISVLkgslllsrilyqQQQALPSADLIEGLADRiadlrlEQfEINQQRDALFQPDAYIDKLE 390
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1802595060 921 AT--PPVSDELLEQFNQVQLEKQRLLQQnlaLVHELQyfNELNSSQTHEIKTKQ 972
Cdd:PRK11281 391 AGhkSEVTDEVRDALLQLLDERRELLDQ---LNKQLN--NQLNLAINLQLNQQQ 439
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
550-921 |
2.10e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.80 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 550 QYELMR-ADSDAKLKELEHEQHLAHQHHQEQLAQLQ---RHNEALVKELDQVKATNFELglaaqgfEQQKVVLEQKNSSL 625
Cdd:COG3096 305 QYRLVEmARELEELSARESDLEQDYQAASDHLNLVQtalRQQEKIERYQEDLEELTERL-------EEQEEVVEEAAEQL 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 626 L---ASLQAAEENVHALGITNSELQNQLNVLeftHKEKTAFDS--KTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLT 700
Cdd:COG3096 378 AeaeARLEAAEEEVDSLKSQLADYQQALDVQ---QTRAIQYQQavQALEKARALCGLPDLTPENAEDYLAAFRAKEQQAT 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 701 DKLMASETQLNhlqQSDENLTQLQTQHELLQesynKLQDEAnhTQQQFHQAQNELDAAHQQLalfkqnnEELTDKCSNIQ 780
Cdd:COG3096 455 EEVLELEQKLS---VADAARRQFEKAYELVC----KIAGEV--ERSQAWQTARELLRRYRSQ-------QALAQRLQQLR 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 781 NELHDLNRvktnweNLNTEHNL--LQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQIT---NLNEANA 855
Cdd:COG3096 519 AQLAELEQ------RLRQQQNAerLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSElrqQLEQLRA 592
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1802595060 856 QYQDL-------LSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQA 921
Cdd:COG3096 593 RIKELaarapawLAAQDALERLREQSGEALADSQEVTAAMQQLLEREREATVERDELAARKQALESQIERLSQ 665
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
623-865 |
2.15e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 623 SSLLASLQAAEENVHALGITNSELQNQLNVLEFTHKEKTAfdsktltlTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDK 702
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKA--------LLKQLAALERRIAALARRIRALEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 703 LMASETQLNHLQQsdenltQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNE 782
Cdd:COG4942 85 LAELEKEIAELRA------ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 783 LHDLNRVKtnwENLNTEHNLLQDKYAQQKEQMQhehsNLAQIQAEHELLQESYNKVKAELNEiQITNLNEANAQYQDLLS 862
Cdd:COG4942 159 LAELAALR---AELEAERAELEALLAELEEERA----ALEALKAERQKLLARLEKELAELAA-ELAELQQEAEELEALIA 230
|
...
gi 1802595060 863 AYE 865
Cdd:COG4942 231 RLE 233
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
624-972 |
3.31e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 47.98 E-value: 3.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 624 SLLASLQAAEENVHALgITNSELQNQLNVLEfTHKEKTAFDsktlTLTKQQLEQTQFDLSLTQEQ---LATFKQQNQSLT 700
Cdd:PRK11281 20 LCLSSAFARAASNGDL-PTEADVQAQLDALN-KQKLLEAED----KLVQQDLEQTLALLDKIDRQkeeTEQLKQQLAQAP 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 701 DKLMASETQLNHLQqsDENLTQLQTQHELLqeSYNKLQDEANHTQQQFHQAQNELDAAHQQLAlfkqnneeltdkcsniq 780
Cdd:PRK11281 94 AKLRQAQAELEALK--DDNDEETRETLSTL--SLRQLESRLAQTLDQLQNAQNDLAEYNSQLV----------------- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 781 nelhdlnrvktnweNLNTehnllqdkyaqQKEQMQHE-HSNLAQIQaehellqesynkvkaelneiQITNLNEANAQYQD 859
Cdd:PRK11281 153 --------------SLQT-----------QPERAQAAlYANSQRLQ--------------------QIRNLLKGGKVGGK 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 860 LLSAyellqSNHNKLKQELQVLNQVNLEKQQLAQKlHNTHQSLSQ-----THAELTQLQAAYNNLQATppVSDELLEQFN 934
Cdd:PRK11281 188 ALRP-----SQRVLLQAEQALLNAQNDLQRKSLEG-NTQLQDLLQkqrdyLTARIQRLEHQLQLLQEA--INSKRLTLSE 259
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1802595060 935 QV--QLEKQR---------LLQQNLALVHEL-QYF----NELNSSQTHEIKTKQ 972
Cdd:PRK11281 260 KTvqEAQSQDeaariqanpLVAQELEINLQLsQRLlkatEKLNTLTQQNLRVKN 313
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
703-922 |
3.32e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 3.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 703 LMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKcsniqne 782
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAE------- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 783 lhdLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEH-----------SNLAQIQAEHELLQESYNKVKAELNEIQiTNLN 851
Cdd:COG4942 85 ---LAELEKEIAELRAELEAQKEELAELLRALYRLGrqpplalllspEDFLDAVRRLQYLKYLAPARREQAEELR-ADLA 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1802595060 852 EANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLhntHQSLSQTHAELTQLQAAYNNLQAT 922
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARL---EKELAELAAELAELQQEAEELEAL 228
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
355-1030 |
3.40e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 3.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 355 EMTLLQEQLDKALKHNAALQIQLEEQLAK--PLQYDQSPVLQERIELLQNQNTNLTQELNELQQKLFKSQNNsllLARLE 432
Cdd:TIGR02169 252 ELEKLTEEISELEKRLEEIEQLLEELNKKikDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEER---LAKLE 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 433 EENRTLKQHLQNnlpeanqlnfvLEKQLEQLQQDKHSLTLQIeqykfdsKKHQEQLALipsLRSEINSLETE----VISL 508
Cdd:TIGR02169 329 AEIDKLLAEIEE-----------LEREIEEERKRRDKLTEEY-------AELKEELED---LRAELEEVDKEfaetRDEL 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 509 KQTNQRLSLIERENNFLKTEIKQLRETK---------LNDENTKYRNLLKQYELMRADSDAKLKELEHE-QHLA------ 572
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELqrlseeladLNAAIAGIEAKINELEEEKEDKALEIKKQEWKlEQLAadlsky 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 573 ---HQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASL----QAAEENVHALGITNSE 645
Cdd:TIGR02169 468 eqeLYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVaqlgSVGERYATAIEVAAGN 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 646 LQNQLNV---------LEFThKEKTAFDSKTLTLTKqqLEQTQFDLSLTQEQ--------LATFKQQNQS---------- 698
Cdd:TIGR02169 548 RLNNVVVeddavakeaIELL-KRRKAGRATFLPLNK--MRDERRDLSILSEDgvigfavdLVEFDPKYEPafkyvfgdtl 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 699 -----------------------LTDK--------LMASETQLNHLQQSDEnLTQLQTQHELLQESYNKLQDEANHTQQQ 747
Cdd:TIGR02169 625 vvedieaarrlmgkyrmvtlegeLFEKsgamtggsRAPRGGILFSRSEPAE-LQRLRERLEGLKRELSSLQSELRRIENR 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 748 FHQAQNELDAAHQQL--------------ALFKQNNEELTDKCSNIQNELHDlnrVKTNWENLNTEHNLLQDKYAQQKEQ 813
Cdd:TIGR02169 704 LDELSQELSDASRKIgeiekeieqleqeeEKLKERLEELEEDLSSLEQEIEN---VKSELKELEARIEELEEDLHKLEEA 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 814 MQH-----EHSNLAQIQAEHELLQESYNKVKAELNEI-QITNLNEANAQY-----QDLLSAYELLQSNHNKLKQELQVLn 882
Cdd:TIGR02169 781 LNDlearlSHSRIPEIQAELSKLEEEVSRIEARLREIeQKLNRLTLEKEYlekeiQELQEQRIDLKEQIKSIEKEIENL- 859
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 883 qvNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFN-QVQLEKQRLLQQNLALvhelqyfneln 961
Cdd:TIGR02169 860 --NGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEaQIEKKRKRLSELKAKL----------- 926
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1802595060 962 SSQTHEIKTKQDETVKEVIIVEkEIPVLPEKKPRLKKrdivIENKEDALGKLSKKErIQAYAERLAKIN 1030
Cdd:TIGR02169 927 EALEEELSEIEDPKGEDEEIPE-EELSLEDVQAELQR----VEEEIRALEPVNMLA-IQEYEEVLKRLD 989
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
577-920 |
3.93e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.02 E-value: 3.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 577 QEQLAQLQRHNEALVKELDQVKatnfelglaaqgFEQQKVV-LEQKNSSLLAS-LQAA-----EENVHALGITNSELQNQ 649
Cdd:COG3096 784 EKRLEELRAERDELAEQYAKAS------------FDVQKLQrLHQAFSQFVGGhLAVAfapdpEAELAALRQRRSELERE 851
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 650 LNvlefthkektAFDSKTLTLtKQQLEQTQFDLSLTQEQL--------ATFKQQNQSLTDKLMASETQLNHLQQSDENLT 721
Cdd:COG3096 852 LA----------QHRAQEQQL-RQQLDQLKEQLQLLNKLLpqanlladETLADRLEELREELDAAQEAQAFIQQHGKALA 920
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 722 QLQTQHELLQEsynklqdeanhTQQQFHQAQNELDAAHQQLALFKQNNEELTDKcsnIQNELHdlnrvkTNWEN---LNT 798
Cdd:COG3096 921 QLEPLVAVLQS-----------DPEQFEQLQADYLQAKEQQRRLKQQIFALSEV---VQRRPH------FSYEDavgLLG 980
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 799 EHNLLQDKYAQQKEQMQHEHSN----LAQIQAEHellqesynkvkaelneiqitnlNEANAQYQDLLSAYELLQSNHNKL 874
Cdd:COG3096 981 ENSDLNEKLRARLEQAEEARREareqLRQAQAQY----------------------SQYNQVLASLKSSRDAKQQTLQEL 1038
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1802595060 875 KQELQVL---------NQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQ 920
Cdd:COG3096 1039 EQELEELgvqadaeaeERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQ 1093
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
488-980 |
4.46e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.53 E-value: 4.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 488 LALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEI---KQLRETKLNDENTKYRNLLKQYELMRAD------- 557
Cdd:pfam12128 233 IAGIMKIRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIasrQEERQETSAELNQLLRTLDDQWKEKRDElngelsa 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 558 SDAKLKELEHE------QHLAHQH--------HQEQLAQLQRHNEALVKELDQvkatnfeLGLAAQGFEQQKVVLEQKns 623
Cdd:pfam12128 313 ADAAVAKDRSElealedQHGAFLDadietaaaDQEQLPSWQSELENLEERLKA-------LTGKHQDVTAKYNRRRSK-- 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 624 sllaslqAAEENVHALGITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKL 703
Cdd:pfam12128 384 -------IKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQA 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 704 MASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNEL 783
Cdd:pfam12128 457 TATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTL 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 784 HdlnrvktnwENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQE-SYNKVKAELNEIQITNLNEANAQYQDLLS 862
Cdd:pfam12128 537 L---------HFLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGElNLYGVKLDLKRIDVPEWAASEEELRERLD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 863 AYE-LLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATppVSDELLEQFNQVQLEKQ 941
Cdd:pfam12128 608 KAEeALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDK--KNKALAERKDSANERLN 685
|
490 500 510
....*....|....*....|....*....|....*....
gi 1802595060 942 RLLQQNLALVHELQYFNELNSSQTHEIKTKQDETVKEVI 980
Cdd:pfam12128 686 SLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVE 724
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
393-854 |
4.52e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.41 E-value: 4.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 393 LQERIELLQNQNTNLTQELNElqqklfKSQNNSLLLARLEEENRTLKQH---LQNNLPEANQLNFVLEKQ---LEQLQQD 466
Cdd:pfam05483 217 LKEDHEKIQHLEEEYKKEIND------KEKQVSLLLIQITEKENKMKDLtflLEESRDKANQLEEKTKLQdenLKELIEK 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 467 KHSLTLQIEQYKFDSKKH-QEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLR---ETKLNDENT 542
Cdd:pfam05483 291 KDHLTKELEDIKMSLQRSmSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTcslEELLRTEQQ 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 543 KYRNLLKQYELMRADSDAKLKELEheqhlahqhhqeQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKN 622
Cdd:pfam05483 371 RLEKNEDQLKIITMELQKKSSELE------------EMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKE 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 623 SSLLASLQAAEENVHALgitnsELQNQLNVLEFTHKEKTAFDSKTlTLTKQQLEQTQFD-----LSLTQEQLAtfkQQNQ 697
Cdd:pfam05483 439 QELIFLLQAREKEIHDL-----EIQLTAIKTSEEHYLKEVEDLKT-ELEKEKLKNIELTahcdkLLLENKELT---QEAS 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 698 SLTDKLMASETQLNHLQQSDENLTQlqtQHELLQESYNKLQDEANHTQQQFHQAQNEL-----------DAAHQQLALFK 766
Cdd:pfam05483 510 DMTLELKKHQEDIINCKKQEERMLK---QIENLEEKEMNLRDELESVREEFIQKGDEVkckldkseenaRSIEYEVLKKE 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 767 QNNEELTDKCSNIQNELHDLNRvktNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELN-EI 845
Cdd:pfam05483 587 KQMKILENKCNNLKKQIENKNK---NIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQkEI 663
|
....*....
gi 1802595060 846 QITNLNEAN 854
Cdd:pfam05483 664 EDKKISEEK 672
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
359-761 |
5.15e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 47.60 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 359 LQEQLDKALKH------NAALQIQLEEQLAkplQYDQSPVLQERIELLQNQNTNLTQELNELQQKL--FKSQNN------ 424
Cdd:PRK11281 41 VQAQLDALNKQklleaeDKLVQQDLEQTLA---LLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELeaLKDDNDeetret 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 425 --SLLLARLE---EENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHS---LTLQIEQYKFDSKkhQEQLALIPSLRs 496
Cdd:PRK11281 118 lsTLSLRQLEsrlAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYAnsqRLQQIRNLLKGGK--VGGKALRPSQR- 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 497 eiNSLETEVISLKQTN--QRLSLierENNflkTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQhlAHQ 574
Cdd:PRK11281 195 --VLLQAEQALLNAQNdlQRKSL---EGN---TQLQDLLQKQRDYLTARIQRLEHQLQLLQEAINSKRLTLSEKT--VQE 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 575 HHQEQLAQLQRHNEALVKELDqvkaTNFELG--LAAQgfEQQKVVLEQKN---SSLLASLQAAEENvhalgitnseLQNQ 649
Cdd:PRK11281 265 AQSQDEAARIQANPLVAQELE----INLQLSqrLLKA--TEKLNTLTQQNlrvKNWLDRLTQSERN----------IKEQ 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 650 LNVLEFT-------HKEKTAFDSKTLT--LTKQ--QLEQTQFDLSLTQEQLAtfkqQNQSLTDKLMASETQLNHLQQSDE 718
Cdd:PRK11281 329 ISVLKGSlllsrilYQQQQALPSADLIegLADRiaDLRLEQFEINQQRDALF----QPDAYIDKLEAGHKSEVTDEVRDA 404
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1802595060 719 NLTQLQTQHELLQESYNKLQDEANH------TQQQFHQAQNELDAAHQQ 761
Cdd:PRK11281 405 LLQLLDERRELLDQLNKQLNNQLNLainlqlNQQQLLSVSDSLQSTLTQ 453
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
426-961 |
5.21e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.20 E-value: 5.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 426 LLLARLEEENRTLKQHLQNNLPEANQLNFvLEKQLEQLQQDKHSLTLQIEQykfDSKKHQEQLALIPSLRSEINSLETEV 505
Cdd:PRK01156 159 LEINSLERNYDKLKDVIDMLRAEISNIDY-LEEKLKSSNLELENIKKQIAD---DEKSHSITLKEIERLSIEYNNAMDDY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 506 ISLKQTNQRLSLIERENNFLKTEIK--QLRETKLNDENTKYRNLlkQYELMRADSDAKLKELEH-EQHLAHQHHQEQLAQ 582
Cdd:PRK01156 235 NNLKSALNELSSLEDMKNRYESEIKtaESDLSMELEKNNYYKEL--EERHMKIINDPVYKNRNYiNDYFKYKNDIENKKQ 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 583 LQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNsSLLASLQAAEENVHALGITNSELQNQLNVLEFTHKEKTA 662
Cdd:PRK01156 313 ILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKSRYDDLN-NQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSA 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 663 FDSKTLTLT-------KQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSD------ENLTQLQTQH-- 727
Cdd:PRK01156 392 FISEILKIQeidpdaiKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSvcpvcgTTLGEEKSNHii 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 728 ELLQESYNKLQDEANHTQQQFHQAQNELdaaHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEHNLLQDKY 807
Cdd:PRK01156 472 NHYNEKKSRLEEKIREIEIEVKDIDEKI---VDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINELKDKHDKY 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 808 AQQKEQMQHEHsnLAQIQAEHellqESYNKVKAELNEIQITNL----NEANAQYQDLLSAYELLQSNH-----------N 872
Cdd:PRK01156 549 EEIKNRYKSLK--LEDLDSKR----TSWLNALAVISLIDIETNrsrsNEIKKQLNDLESRLQEIEIGFpddksyidksiR 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 873 KLKQELQVL-NQVNL--EKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQvQLEKQRLLQQNLA 949
Cdd:PRK01156 623 EIENEANNLnNKYNEiqENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRK-ALDDAKANRARLE 701
|
570
....*....|....
gi 1802595060 950 LVHE--LQYFNELN 961
Cdd:PRK01156 702 STIEilRTRINELS 715
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
666-954 |
6.04e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 47.26 E-value: 6.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 666 KTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKL---MASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEAN 742
Cdd:PRK04863 300 RQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLnlvQTALRQQEKIERYQADLEELEERLEEQNEVVEEADEQQE 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 743 HTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKT-------NWENLNTEHNLLQDKYAQQKEQMQ 815
Cdd:PRK04863 380 ENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALERAKQlcglpdlTADNAEDWLEEFQAKEQEATEELL 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 816 HEHSNLAQIQAEHELLQESYNKVKAELNEIqitNLNEANAQYQDLLSAYE---LLQSNHNKLKQELQVLNQVNLEKQQLA 892
Cdd:PRK04863 460 SLEQKLSVAQAAHSQFEQAYQLVRKIAGEV---SRSEAWDVARELLRRLReqrHLAEQLQQLRMRLSELEQRLRQQQRAE 536
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1802595060 893 QKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHEL 954
Cdd:PRK04863 537 RLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRL 598
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
357-846 |
7.27e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 46.66 E-value: 7.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 357 TLLQEQLDKALKHNAALQI---QLEEQLAKplqydQSPVLQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEE 433
Cdd:pfam05557 37 SALKRQLDRESDRNQELQKrirLLEKREAE-----AEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKN 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 434 ENRTLKQHLQNN---LPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINSLETEVISLKQ 510
Cdd:pfam05557 112 ELSELRRQIQRAeleLQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKN 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 511 TNQRLSLI---ERENNFLKTEIKQLRETK-----LNDENTKYRNLLKQYELMRADSdAKLkELEHEQHLAHQHHQEQLAQ 582
Cdd:pfam05557 192 SKSELARIpelEKELERLREHNKHLNENIenkllLKEEVEDLKRKLEREEKYREEA-ATL-ELEKEKLEQELQSWVKLAQ 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 583 LQRHN----EALVKELDQvkatnfelglaaqgFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTHK 658
Cdd:pfam05557 270 DTGLNlrspEDLSRRIEQ--------------LQQREIVLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLK 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 659 EktafdsktltlTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASET--QLNHLQQSDENLTQ-LQTQHELLQESYN 735
Cdd:pfam05557 336 R-----------HKALVRRLQRRVLLLTKERDGYRAILESYDKELTMSNYspQLLERIEEAEDMTQkMQAHNEEMEAQLS 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 736 KLQDEANHTQQQFHQAQNELDAAHQQLAL-----FKQNNEELTDKCSNIQNELHDLNRVKTNWEnLNTEHNLLQDKYAQQ 810
Cdd:pfam05557 405 VAEEELGGYKQQAQTLERELQALRQQESLadpsySKEEVDSLRRKLETLELERQRLREQKNELE-MELERRCLQGDYDPK 483
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1802595060 811 KEQMQHEHSNLA-----QIQAEHELLQESYNKVKAELNEIQ 846
Cdd:pfam05557 484 KTKVLHLSMNPAaeayqQRKNQLEKLQAEIERLKRLLKKLE 524
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
353-615 |
7.96e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.97 E-value: 7.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 353 SFEMTLLQEQLDKALKHNAALQIQLEEQLAKPLQydqspvLQERIELLQNQNTNLTQELNELQQKLFksqnnslLLARLE 432
Cdd:TIGR02168 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEE------LEAQIEQLKEELKALREALDELRAELT-------LLNEEA 819
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 433 EENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINSLetevisLKQTN 512
Cdd:TIGR02168 820 ANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEA------LALLR 893
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 513 QRLSLIERENNFLKTEIKQLRE--TKLNDENTKYRNLLKQYELMRADSDAKLKE---LEHEQHLAHQHHQE-QLAQLQRH 586
Cdd:TIGR02168 894 SELEELSEELRELESKRSELRRelEELREKLAQLELRLEGLEVRIDNLQERLSEeysLTLEEAEALENKIEdDEEEARRR 973
|
250 260
....*....|....*....|....*....
gi 1802595060 587 NEALVKELDQVKATNFElglAAQGFEQQK 615
Cdd:TIGR02168 974 LKRLENKIKELGPVNLA---AIEEYEELK 999
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
693-935 |
8.13e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.55 E-value: 8.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 693 KQQNQSLtdklmasETQLNHLQQsdenltQLQTQHELLQESyNKLQDEANHtqqqfhQAQNELDAAHQQLALFKQNNEEL 772
Cdd:PHA02562 180 NQQIQTL-------DMKIDHIQQ------QIKTYNKNIEEQ-RKKNGENIA------RKQNKYDELVEEAKTIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 773 TDKCSNIQNELHDlnrVKTNWENLNTEHNLLQDKYAQ-QKE-QMQHEHSN----LAQIQAEHELLQESYNKVKaelneiq 846
Cdd:PHA02562 240 TDELLNLVMDIED---PSAALNKLNTAAAKIKSKIEQfQKViKMYEKGGVcptcTQQISEGPDRITKIKDKLK------- 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 847 itnlnEANAQYQDLLSAYEllqsnhnKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVS 926
Cdd:PHA02562 310 -----ELQHSLEKLDTAID-------ELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDN 377
|
....*....
gi 1802595060 927 DELLEQFNQ 935
Cdd:PHA02562 378 AEELAKLQD 386
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
684-941 |
9.02e-05 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 46.72 E-value: 9.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 684 LTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLqtqhellqesyNKLQDEANHTQQQFHQAQNELDAAHQQLA 763
Cdd:PRK10246 213 LTPEQVQSLTASLQVLTDEEKQLLTAQQQQQQSLNWLTRL-----------DELQQEASRRQQALQQALAAEEKAQPQLA 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 764 --LFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEhnlLQDKYA----------QQKEQMQHEHSNLAQIQAEHELL 831
Cdd:PRK10246 282 alSLAQPARQLRPHWERIQEQSAALAHTRQQIEEVNTR---LQSTMAlrarirhhaaKQSAELQAQQQSLNTWLAEHDRF 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 832 Q------ESYNKVKAELN--EIQITNLNEANAQYQDLLSAyeLLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLS 903
Cdd:PRK10246 359 RqwnnelAGWRAQFSQQTsdREQLRQWQQQLTHAEQKLNA--LPAITLTLTADEVAAALAQHAEQRPLRQRLVALHGQIV 436
|
250 260 270
....*....|....*....|....*....|....*...
gi 1802595060 904 QTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQ 941
Cdd:PRK10246 437 PQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
677-892 |
9.99e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 9.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 677 QTQFD-LSLTQEQLATFKQQNQSLT------DKLMASETQLNHLQQSDENLTQLQTQHEL---------LQESYNKLQDE 740
Cdd:COG4913 231 VEHFDdLERAHEALEDAREQIELLEpirelaERYAAARERLAELEYLRAALRLWFAQRRLelleaeleeLRAELARLEAE 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 741 ANHTQQQFHQAQNELDAAHQQLAlfKQNNEELTDkcsnIQNELHDLNRvktnwenlntEHNLLQDKYAQQKEQMQHEHSN 820
Cdd:COG4913 311 LERLEARLDALREELDELEAQIR--GNGGDRLEQ----LEREIERLER----------ELEERERRRARLEALLAALGLP 374
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1802595060 821 LAQIQAEHELLQESYNKVKAELNEIQitnlNEANAQYQDLLSAYELLQSNHNKLKQELQVL--NQVNLEKQQLA 892
Cdd:COG4913 375 LPASAEEFAALRAEAAALLEALEEEL----EALEEALAEAEAALRDLRRELRELEAEIASLerRKSNIPARLLA 444
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
401-624 |
1.45e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 401 QNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFD 480
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 481 SKKHQEQLA-LIPSLRSEINSLETEVI----SLKQTNQRLSLIERENNFLKTEIKQLRETK--LNDENTKYRNLLKQYEL 553
Cdd:COG4942 99 LEAQKEELAeLLRALYRLGRQPPLALLlspeDFLDAVRRLQYLKYLAPARREQAEELRADLaeLAALRAELEAERAELEA 178
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1802595060 554 MRADSDAKLKELEHEQhlahQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSS 624
Cdd:COG4942 179 LLAELEEERAALEALK----AERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
569-783 |
1.66e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 569 QHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQN 648
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 649 QLNVLEFTHKE--KTAFDSKTLTLTKQQLEQTQF-DLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQS-DENLTQLQ 724
Cdd:COG4942 98 ELEAQKEELAEllRALYRLGRQPPLALLLSPEDFlDAVRRLQYLKYLAPARREQAEELRADLAELAALRAElEAERAELE 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1802595060 725 TQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNEL 783
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
431-788 |
1.84e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 431 LEEENRTLKQHLQNNLPEANQLNFVLEK---QLEQLQQDKHSLTLQIEQYK---------FDSKKHQEQLAlipslrSEI 498
Cdd:pfam05483 361 LEELLRTEQQRLEKNEDQLKIITMELQKkssELEEMTKFKNNKEVELEELKkilaedeklLDEKKQFEKIA------EEL 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 499 NSLETEVISLKQTNQR-LSLIERENNFLKTE----IKQLRETKLNDENTKYRNL-LKQYELMRADSDAKLKELEHEQHLA 572
Cdd:pfam05483 435 KGKEQELIFLLQAREKeIHDLEIQLTAIKTSeehyLKEVEDLKTELEKEKLKNIeLTAHCDKLLLENKELTQEASDMTLE 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 573 HQHHQEQLAQLQRHNEALVKELDQVKATNFELglaAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNV 652
Cdd:pfam05483 515 LKKHQEDIINCKKQEERMLKQIENLEEKEMNL---RDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKI 591
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 653 LEFT------------------HKEKTAFDSKTlTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTD--------KLMAS 706
Cdd:pfam05483 592 LENKcnnlkkqienknknieelHQENKALKKKG-SAENKQLNAYEIKVNKLELELASAKQKFEEIIDnyqkeiedKKISE 670
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 707 ETQLNHLQQSDENLTQ-LQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEE-------LTDKCSN 778
Cdd:pfam05483 671 EKLLEEVEKAKAIADEaVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEqssakaaLEIELSN 750
|
410
....*....|
gi 1802595060 779 IQNELHDLNR 788
Cdd:pfam05483 751 IKAELLSLKK 760
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
407-772 |
3.82e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 3.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 407 LTQELNELQQKLFKSQ-----NNSLLLARLEEENRTLKQHLQNNLPEANQLNfVLEKQLEQLQQDKHSLTLQIEQYKfDS 481
Cdd:COG4717 47 LLERLEKEADELFKPQgrkpeLNLKELKELEEELKEAEEKEEEYAELQEELE-ELEEELEELEAELEELREELEKLE-KL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 482 KKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLR---ETKLNDENTKYRNLLKQYELMRADS 558
Cdd:COG4717 125 LQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQeelEELLEQLSLATEEELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 559 DAKLKELEHEQHLAHQHHQEQLAQLQRHNEALV--KELDQVKATNFELGLAAQGFEQQ---------------------- 614
Cdd:COG4717 205 QQRLAELEEELEEAQEELEELEEELEQLENELEaaALEERLKEARLLLLIAAALLALLglggsllsliltiagvlflvlg 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 615 -----KVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTHKEKTAFDSKTLTL--TKQQLEQTQFDLSLTQE 687
Cdd:COG4717 285 llallFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRieELQELLREAEELEEELQ 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 688 QLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQE----------------SYNKLQDEANHTQQQFHQA 751
Cdd:COG4717 365 LEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEqleellgeleellealDEEELEEELEELEEELEEL 444
|
410 420
....*....|....*....|.
gi 1802595060 752 QNELDAAHQQLALFKQNNEEL 772
Cdd:COG4717 445 EEELEELREELAELEAELEQL 465
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
719-915 |
3.99e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 719 NLTQLQTQHELLQESYNKlqdeanhtQQQFHQAQNELDAAHQQLalfkqnnEELTDKCSNIQNELHDLNRVKTNWENLNT 798
Cdd:COG4717 69 NLKELKELEEELKEAEEK--------EEEYAELQEELEELEEEL-------EELEAELEELREELEKLEKLLQLLPLYQE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 799 EHNLLQ--DKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQ 876
Cdd:COG4717 134 LEALEAelAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEE 213
|
170 180 190
....*....|....*....|....*....|....*....
gi 1802595060 877 ELQVLNQvnlEKQQLAQKLHNThQSLSQTHAELTQLQAA 915
Cdd:COG4717 214 ELEEAQE---ELEELEEELEQL-ENELEAAALEERLKEA 248
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
671-927 |
4.14e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 671 TKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQsdeNLTQLQTQHELLQESYNKLQDEANHTQQQFHQ 750
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALAR---RIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 751 AQNELdaAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKtnwenlntehnLLQDKYAQQKEQMQHEHSNLAQIQAEHEL 830
Cdd:COG4942 102 QKEEL--AELLRALYRLGRQPPLALLLSPEDFLDAVRRLQ-----------YLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 831 LQESYNKVKAELNEIQitnlneanaqyqdllSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELT 910
Cdd:COG4942 169 LEAERAELEALLAELE---------------EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
250
....*....|....*..
gi 1802595060 911 QLQAAYNNLQATPPVSD 927
Cdd:COG4942 234 AEAAAAAERTPAAGFAA 250
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
349-1009 |
4.19e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.58 E-value: 4.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 349 QPTVSFEMTLLQEQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLL 428
Cdd:pfam02463 247 RDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 429 ARLEEENRTLKQHLQNNLPEANQLNFVLEKQLEQL-QQDKHSLTLQIEQYKfdskkhqeqlalipSLRSEINSLETEVIS 507
Cdd:pfam02463 327 EKELKKEKEEIEELEKELKELEIKREAEEEEEEELeKLQEKLEQLEEELLA--------------KKKLESERLSSAAKL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 508 LKQTNQRLSLIERENNfLKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHN 587
Cdd:pfam02463 393 KEEELELKSEEEKEAQ-LLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 588 EALVKELDQVKATNFELGLAAQ---------------------GFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSEL 646
Cdd:pfam02463 472 DLLKETQLVKLQEQLELLLSRQkleersqkeskarsglkvllaLIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIV 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 647 QNQLNVLEFTHKEK----TAFDSKTLTLTKQQLEQTQFDLS------------LTQEQLATFKQQN-------------- 696
Cdd:pfam02463 552 EVSATADEVEERQKlvraLTELPLGARKLRLLIPKLKLPLKsiavleidpilnLAQLDKATLEADEddkrakvvegilkd 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 697 ---QSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELT 773
Cdd:pfam02463 632 telTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEE 711
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 774 DKCSNIQNELHDLNRVKTNWENLNTEHNLLQDKYAQqkEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEA 853
Cdd:pfam02463 712 LKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDE--EEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVE 789
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 854 NAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQF 933
Cdd:pfam02463 790 EEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELL 869
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1802595060 934 NQVQLEKQRLLQQNLALVHELQYFNELNSSQTHEIKTKQDETVKEVIIVEKEIPVLPEKKPRLKKRDIVIENKEDA 1009
Cdd:pfam02463 870 QELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEA 945
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
741-949 |
4.71e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 4.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 741 ANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELhdlnrvktnwENLNTEHNLLQDKYAQQKEQMQHEHSN 820
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQL----------AALERRIAALARRIRALEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 821 LAQIQAEHELLQESYNKVKAELNE-----------------IQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQ 883
Cdd:COG4942 85 LAELEKEIAELRAELEAQKEELAEllralyrlgrqpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1802595060 884 VNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLA 949
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
804-1032 |
4.97e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 4.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 804 QDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQiTNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLN- 882
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALE-RRIAALARRIRALEQELAALEAELAELEKEIAELRa 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 883 QVNLEKQQLAQKLHNTHQSLSQTHAEL-------TQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQ 955
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALllspedfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1802595060 956 YFNELNSSQTHEIKTKQDETVKEVIIVEKEIPVLPEKKPRLKKRDIVIENKEDALGKLSKKERIQAYAERLAKINGK 1032
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGK 254
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
428-569 |
6.84e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.69 E-value: 6.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 428 LARLEEENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQykfdskkhqeqlalipsLRSEINSLETEVIS 507
Cdd:COG2433 390 LPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEE-----------------KDERIERLERELSE 452
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1802595060 508 LKQTNQRLSLIERENNFLKTEIKQLReTKLNDENTKYRNLLKQYELMRadsdaKLKELEHEQ 569
Cdd:COG2433 453 ARSEERREIRKDREISRLDREIERLE-RELEEERERIEELKRKLERLK-----ELWKLEHSG 508
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
398-634 |
7.95e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 7.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 398 ELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKQHlQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQY 477
Cdd:PRK03918 193 ELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEEL-KEEIEELEKELESLEGSKRKLEEKIRELEERIEEL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 478 KFDSKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRE--TKLNDENTKYRNLLKQYELMR 555
Cdd:PRK03918 272 KKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEEriKELEEKEERLEELKKKLKELE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 556 adsdAKLKELEhEQHLAHQHHQEQLAQLQRHN--------EALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLA 627
Cdd:PRK03918 352 ----KRLEELE-ERHELYEEAKAKKEELERLKkrltgltpEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKK 426
|
....*..
gi 1802595060 628 SLQAAEE 634
Cdd:PRK03918 427 AIEELKK 433
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
396-966 |
8.86e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.29 E-value: 8.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 396 RIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQNNL--------PEANQLNFVLEKQLEQLQQDK 467
Cdd:pfam12128 242 EFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLrtlddqwkEKRDELNGELSAADAAVAKDR 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 468 HSLTLQIEQYK-FDS------KKHQEQLaliPSLRSEINSLEtEVISLKQTNQRlsLIERENNFLKTEIKQLRETKLNDE 540
Cdd:pfam12128 322 SELEALEDQHGaFLDadietaAADQEQL---PSWQSELENLE-ERLKALTGKHQ--DVTAKYNRRRSKIKEQNNRDIAGI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 541 NTKYRNLLKQYELMRADSDAKLKELEHEqhLAHQHHQ------EQLAQLQRHNEALVKELDQVKAT----------NFEL 604
Cdd:pfam12128 396 KDKLAKIREARDRQLAVAEDDLQALESE--LREQLEAgklefnEEEYRLKSRLGELKLRLNQATATpelllqlenfDERI 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 605 GLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITN----------SELQNQL-----NVLEFTHKEKTAF-DSKTL 668
Cdd:pfam12128 474 ERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASrrleerqsalDELELQLfpqagTLLHFLRKEAPDWeQSIGK 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 669 TLTKQQLEQTQFDLSLTQEQLatfKQQNQSLTDKLMASETQLNHLQQSDEnltQLQTQHELLQESYNKLQDEANHTQQQF 748
Cdd:pfam12128 554 VISPELLHRTDLDPEVWDGSV---GGELNLYGVKLDLKRIDVPEWAASEE---ELRERLDKAEEALQSAREKQAAAEEQL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 749 HQAQNELDAAHQQLAL----FKQNNEELTDKCSNIQNELHDLNR--------VKTNWENLNTEHNLLQDKYAQQKEQMQH 816
Cdd:pfam12128 628 VQANGELEKASREETFartaLKNARLDLRRLFDEKQSEKDKKNKalaerkdsANERLNSLEAQLKQLDKKHQAWLEEQKE 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 817 EHSNL----------------AQIQAEHELLQESYNKVKAELNEIQITNLNEANA-------------QYQDLLSAYELL 867
Cdd:pfam12128 708 QKREArtekqaywqvvegaldAQLALLKAAIAARRSGAKAELKALETWYKRDLASlgvdpdviaklkrEIRTLERKIERI 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 868 QSNHNKLKQELQVLN-QVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYN----NLQATPPVSDELLEQFNQvQLEKQR 942
Cdd:pfam12128 788 AVRRQEVLRYFDWYQeTWLQRRPRLATQLSNIERAISELQQQLARLIADTKlrraKLEMERKASEKQQVRLSE-NLRGLR 866
|
650 660
....*....|....*....|....
gi 1802595060 943 LLQQNLALVHELQYFNELNSSQTH 966
Cdd:pfam12128 867 CEMSKLATLKEDANSEQAQGSIGE 890
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
360-889 |
9.67e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 43.53 E-value: 9.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 360 QEQLDKALKHNAALQIQLEEQLAKplqyDQSPVLQE---RIELLQNQNTNLTQELNElqqklFKSQNNSLLLARLE---E 433
Cdd:COG5022 858 KKRFSLLKKETIYLQSAQRVELAE----RQLQELKIdvkSISSLKLVNLELESEIIE-----LKKSLSSDLIENLEfktE 928
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 434 ENRTLKQHLQN-NLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEqlalipsLRSEINSLETEvisLKQTN 512
Cdd:COG5022 929 LIARLKKLLNNiDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTI-------LVREGNKANSE---LKNFK 998
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 513 QRLSLIERENNFLKTEIKQLREtkLNDENTKYRNLLKQYELMRAD--SDAKLKELEHEQHLAHQHHQEQLAQLQRHNEAL 590
Cdd:COG5022 999 KELAELSKQYGALQESTKQLKE--LPVEVAELQSASKIISSESTElsILKPLQKLKGLLLLENNQLQARYKALKLRRENS 1076
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 591 VKELDQ-------------VKATNFELG---LAAQGFEQQKVVLEQKNSSLL-ASLQAAEENVHALGITNSELQNQLNVL 653
Cdd:COG5022 1077 LLDDKQlyqlestenllktINVKDLEVTnrnLVKPANVLQFIVAQMIKLNLLqEISKFLSQLVNTLEPVFQKLSVLQLEL 1156
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 654 EFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQEs 733
Cdd:COG5022 1157 DGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKLISEGWVPTE- 1235
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 734 YNKLQDEANHTQQQFHQAQNE--------LDAAHQQLALFKQNNEELTDKCSNIQNELHDLNrvktnWENLNTEHNLLQD 805
Cdd:COG5022 1236 YSTSLKGFNNLNKKFDTPASMsnekllslLNSIDNLLSSYKLEEEVLPATINSLLQYINVGL-----FNALRTKASSLRW 1310
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 806 KYAQQKEQMQHEHSNLAQiQAEHELLQESYNKVK--AELNEIQITNLNEANAQYQdllSAYELLQSNHNKLKQELQVLNQ 883
Cdd:COG5022 1311 KSATEVNYNSEELDDWCR-EFEISDVDEELEELIqaVKVLQLLKDDLNKLDELLD---ACYSLNPAEIQNLKSRYDPADK 1386
|
....*..
gi 1802595060 884 -VNLEKQ 889
Cdd:COG5022 1387 eNNLPKE 1393
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
355-845 |
1.18e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.00 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 355 EMTLLQEQLDKALKHNAALQIQLEEQLAKplqydQSPVLQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEE 434
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEA-----LLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 435 NRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKfdskKHQEQLALIPSLRSEINSLETEVISLKQTNQR 514
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE----EEEALLELLAELLEEAALLEAALAELLEELAE 488
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 515 L-SLIERENNFLKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQHLAHQH-HQEQLAQLQRHNEALVK 592
Cdd:COG1196 489 AaARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNiVVEDDEVAAAAIEYLKA 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 593 E---------LDQVKATNFELGLAAQGFEQQKVVL-----------EQKNSSLLASLQAAEENVHALGITNSELQNQLNV 652
Cdd:COG1196 569 AkagratflpLDKIRARAALAAALARGAIGAAVDLvasdlreadarYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLRE 648
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 653 LEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQE 732
Cdd:COG1196 649 VTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEE 728
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 733 synKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVktnweNLN--TEHNLLQDKY--- 807
Cdd:COG1196 729 ---QLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPV-----NLLaiEEYEELEERYdfl 800
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 1802595060 808 AQQKEQMQHEHSNLAQIQAE-----HELLQESYNKVKAELNEI 845
Cdd:COG1196 801 SEQREDLEEARETLEEAIEEidretRERFLETFDAVNENFQEL 843
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
560-947 |
1.52e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 560 AKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKElDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLAS---LQAAEENV 636
Cdd:PRK04863 314 RELAELNEAESDLEQDYQAASDHLNLVQTALRQQ-EKIERYQADLEELEERLEEQNEVVEEADEQQEENearAEAAEEEV 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 637 HALGITNSELQNQLNVLEFT----HKEKTAFDSktltlTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNh 712
Cdd:PRK04863 393 DELKSQLADYQQALDVQQTRaiqyQQAVQALER-----AKQLCGLPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLS- 466
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 713 lqQSDENLTQLQTQHELLQesynKLQDEANHTQQQfHQAQNELDAAHQQLALFKQnneeltdkCSNIQNELHDLNRVKTN 792
Cdd:PRK04863 467 --VAQAAHSQFEQAYQLVR----KIAGEVSRSEAW-DVARELLRRLREQRHLAEQ--------LQQLRMRLSELEQRLRQ 531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 793 WENLNTehnlLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITnlneanaqyqdllsayellqsnhn 872
Cdd:PRK04863 532 QQRAER----LLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMA------------------------ 583
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1802595060 873 kLKQELQVLNQVNLEKQQLAQKLHNTHQSLSqthaeltQLQAAYNNLQATPpvsdELLEQFNQVQLEKQRLLQQN 947
Cdd:PRK04863 584 -LRQQLEQLQARIQRLAARAPAWLAAQDALA-------RLREQSGEEFEDS----QDVTEYMQQLLERERELTVE 646
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
393-758 |
1.80e-03 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 41.98 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 393 LQERIELLQNQNTNLTQELNELQQKLFKSQNNSlllarlEEENRTLKQHLQnnlpeanqlnfvLEKQLEQLQQDkhslTL 472
Cdd:pfam05622 19 LDQQVSLLQEEKNSLQQENKKLQERLDQLESGD------DSGTPGGKKYLL------------LQKQLEQLQEE----NF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 473 QIEQYKFDSKKHQEQLalipslrseinslETEVISLKQTNQRLSLIERENNFLKTEIKQLRETK---------------- 536
Cdd:pfam05622 77 RLETARDDYRIKCEEL-------------EKEVLELQHRNEELTSLAEEAQALKDEMDILRESSdkvkkleatvetykkk 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 537 -------------LNDENTKY--RNL-----LKQYELMRADSDAKLKELeheQHLAHQHH----------------QEQL 580
Cdd:pfam05622 144 ledlgdlrrqvklLEERNAEYmqRTLqleeeLKKANALRGQLETYKRQV---QELHGKLSeeskkadklefeykklEEKL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 581 AQLQRHNEALVKELDQVKATNFEL--GLAAQGFEQQKVVLEQKNSSLLASLQAAeenvhalgITNSELQNQLNVLEFTHK 658
Cdd:pfam05622 221 EALQKEKERLIIERDTLRETNEELrcAQLQQAELSQADALLSPSSDPGDNLAAE--------IMPAEIREKLIRLQHENK 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 659 ----EKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQ----NQSLTDKLMASETQLNHLQQS-------DENLTQL 723
Cdd:pfam05622 293 mlrlGQEGSYRERLTELQQLLEDANRRKNELETQNRLANQRilelQQQVEELQKALQEQGSKAEDSsllkqklEEHLEKL 372
|
410 420 430
....*....|....*....|....*....|....*
gi 1802595060 724 QTQHELLQESYNKLQDEANHTQQQFHQAQNELDAA 758
Cdd:pfam05622 373 HEAQSELQKKKEQIEELEPKQDSNLAQKIDELQEA 407
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
675-1002 |
1.81e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 42.37 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 675 LEQTQFDLSLTQEQLATFKQQNQSLTDKL----MASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEAnhtqqQFHQ 750
Cdd:COG5022 798 KLQPLLSLLGSRKEYRSYLACIIKLQKTIkrekKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKET-----IYLQ 872
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 751 AQNELDAAHQQLALFKQNNEELTdKCSNIQNELhdlnrVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHEL 830
Cdd:COG5022 873 SAQRVELAERQLQELKIDVKSIS-SLKLVNLEL-----ESEIIELKKSLSSDLIENLEFKTELIARLKKLLNNIDLEEGP 946
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 831 LQE-SYNKVKAELNEiQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAEL 909
Cdd:COG5022 947 SIEyVKLPELNKLHE-VESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEV 1025
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 910 TQLQAAYNNLQATPpvsdELLEQFNQVQ-LEKQRLLQQNlalVHELQYFNELNSSQTHEIKTKQDETVKEVIIVEKEIPV 988
Cdd:COG5022 1026 AELQSASKIISSES----TELSILKPLQkLKGLLLLENN---QLQARYKALKLRRENSLLDDKQLYQLESTENLLKTINV 1098
|
330
....*....|....
gi 1802595060 989 lpeKKPRLKKRDIV 1002
Cdd:COG5022 1099 ---KDLEVTNRNLV 1109
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
376-782 |
1.88e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.20 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 376 QLEEQLAKPLQYDQSPVLQERIELLQNQNTNLtQELNELQQKLFKSQN--NSLLLARLEEENRTLKQHLQNNLPEANQLN 453
Cdd:PLN02939 49 KRGKNIAPKQRSSNSKLQSNTDENGQLENTSL-RTVMELPQKSTSSDDdhNRASMQRDEAIAAIDNEQQTNSKDGEQLSD 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 454 FVLEKQLEQLQQDKHSlTLQIEQYKFDSKKHQEQ-LALIPSLRSEINSLETEvisLKQTNQRLSLIERENnfLKTEIKQL 532
Cdd:PLN02939 128 FQLEDLVGMIQNAEKN-ILLLNQARLQALEDLEKiLTEKEALQGKINILEMR---LSETDARIKLAAQEK--IHVEILEE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 533 RETKLNDEntkyrnLLKQYELMRADSDAKLKELEHEQhlahqhhqEQLAQLQRHNEALVKELDQVKATnfelglaaqgfE 612
Cdd:PLN02939 202 QLEKLRNE------LLIRGATEGLCVHSLSKELDVLK--------EENMLLKDDIQFLKAELIEVAET-----------E 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 613 QQKVVLEQKNSSLLASLQAAEENVhalgitnseLQNQLNVLEFTHKEKTAFDSKTLTLtkqqleQTQFDLSLTQ-EQLAT 691
Cdd:PLN02939 257 ERVFKLEKERSLLDASLRELESKF---------IVAQEDVSKLSPLQYDCWWEKVENL------QDLLDRATNQvEKAAL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 692 FKQQNQSL---TDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEanhtqqqfhqaqneldaAHQQLALFKQN 768
Cdd:PLN02939 322 VLDQNQDLrdkVDKLEASLKEANVSKFSSYKVELLQQKLKLLEERLQASDHE-----------------IHSYIQLYQES 384
|
410
....*....|....
gi 1802595060 769 NEELTDKCSNIQNE 782
Cdd:PLN02939 385 IKEFQDTLSKLKEE 398
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
709-872 |
2.02e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 709 QLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNElhdLNR 788
Cdd:COG1579 8 ALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQ---LGN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 789 VKTNWE---------NLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEI------QITNLNEA 853
Cdd:COG1579 85 VRNNKEyealqkeieSLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEElaeleaELEELEAE 164
|
170 180
....*....|....*....|....
gi 1802595060 854 NAQY-----QDLLSAYELLQSNHN 872
Cdd:COG1579 165 REELaakipPELLALYERIRKRKN 188
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
317-880 |
2.26e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.03 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 317 IELRQAQLETPPVTYMgveeykllpvQDVVPVQPTVSfemtllqeQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQER 396
Cdd:pfam15921 301 LEIIQEQARNQNSMYM----------RQLSDLESTVS--------QLRSELREAKRMYEDKIEELEKQLVLANSELTEAR 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 397 IELLQ--NQNTNLTQELNELQQKLFKSQNNsllLARLEEENRTL----------KQHLQNNLPEANQLNFVLEKQLEQLQ 464
Cdd:pfam15921 363 TERDQfsQESGNLDDQLQKLLADLHKREKE---LSLEKEQNKRLwdrdtgnsitIDHLRRELDDRNMEVQRLEALLKAMK 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 465 QDKHSltlQIEQYKFDSKKHQEQLALIPSLRSEINS----LETEVISLKQTNQRLSLIERENNFLKTEIKQlRETKLNDE 540
Cdd:pfam15921 440 SECQG---QMERQMAAIQGKNESLEKVSSLTAQLEStkemLRKVVEELTAKKMTLESSERTVSDLTASLQE-KERAIEAT 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 541 NTKYRNLlkqyelmRADSDAKLKELEHeqhlaHQHHQEQLAQLQRHNEAlvkeldqvkatnfelgLAAQGFEQQKV--VL 618
Cdd:pfam15921 516 NAEITKL-------RSRVDLKLQELQH-----LKNEGDHLRNVQTECEA----------------LKLQMAEKDKVieIL 567
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 619 EQKNSSLLASLQAAEENVHALGITNSELQNQLNVLEFTHKE-KTAFDSKTLTLtkQQLEQTQFDLSLTQEQLAT------ 691
Cdd:pfam15921 568 RQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEfKILKDKKDAKI--RELEARVSDLELEKVKLVNagserl 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 692 -----FKQQNQSLTDKLMASETQLNHLQQSDENLTQ-LQTQHELLQESYNKLQDEANHTQQQFHQAQNEL------DAAH 759
Cdd:pfam15921 646 ravkdIKQERDQLLNEVKTSRNELNSLSEDYEVLKRnFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLksmegsDGHA 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 760 QQLALFKQnnEELTDKCSNIQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVK 839
Cdd:pfam15921 726 MKVAMGMQ--KQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLK 803
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1802595060 840 AELNEIQITnLNEANAQY---QDLLSAYElLQSNHNKLKQELQV 880
Cdd:pfam15921 804 EKVANMEVA-LDKASLQFaecQDIIQRQE-QESVRLKLQHTLDV 845
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
393-633 |
2.66e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 393 LQERIELLQNQNTNLTQELNELQQKLFKSQNNsllLARLEEENRTLkqhlqnNLPEANQLnfvLEKQLEQLQQDKHSLTL 472
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAA---LEEFRQKNGLV------DLSEEAKL---LLQQLSELESQLAEARA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 473 QIEQYKfdskkhqeqlALIPSLRSEINSLETEVISLKQTNQRLSLIERENNfLKTEIKQLReTKLNDENTKYRNLLKQYE 552
Cdd:COG3206 234 ELAEAE----------ARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAE-LEAELAELS-ARYTPNHPDVIALRAQIA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 553 LMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELglaaQGFEQQKVVLEQKNSSLLASLQAA 632
Cdd:COG3206 302 ALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAEL----RRLEREVEVARELYESLLQRLEEA 377
|
.
gi 1802595060 633 E 633
Cdd:COG3206 378 R 378
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
519-758 |
3.10e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 3.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 519 ERENNFLKTEIKQLREtKLNDENTKYRNLLKQYELMR---ADSDAKLKELEHEQHLAhqhhQEQLAQLQRHNEALVKELD 595
Cdd:COG4942 26 EAELEQLQQEIAELEK-ELAALKKEEKALLKQLAALErriAALARRIRALEQELAAL----EAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 596 QVKATNFELGLAAQGFEQQKVVLEQKNSSllaSLQAAEENVHALGITNSELQNQLnvlefthkektafdsKTLTLTKQQL 675
Cdd:COG4942 101 AQKEELAELLRALYRLGRQPPLALLLSPE---DFLDAVRRLQYLKYLAPARREQA---------------EELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 676 EQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNH-LQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNE 754
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERAALEALKAERQKlLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
....
gi 1802595060 755 LDAA 758
Cdd:COG4942 243 TPAA 246
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
708-999 |
6.13e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 6.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 708 TQLNHLQQSDENLTQLQTQHELLQE-SYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDL 786
Cdd:TIGR02169 198 QQLERLRREREKAERYQALLKEKREyEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 787 N------------RVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEhellqesYNKVKAELNEIQiTNLNEAN 854
Cdd:TIGR02169 278 NkkikdlgeeeqlRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAE-------IDKLLAEIEELE-REIEEER 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 855 AQYQDLLSAYELLQSNHNKLKQELqvlnqvnlekQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFN 934
Cdd:TIGR02169 350 KRRDKLTEEYAELKEELEDLRAEL----------EEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLS 419
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1802595060 935 QVQLEKQRLLQQNLALVHELQYFNELNSSQTHEIKTKQDETVKEVIIVEKEIPVLPEKKPRLKKR 999
Cdd:TIGR02169 420 EELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKE 484
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
455-927 |
6.96e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 40.26 E-value: 6.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 455 VLEKQLEQLQQDKHSL-------TLQIEQYKFDSKKHQEQL-ALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLK 526
Cdd:pfam07888 31 LLQNRLEECLQERAELlqaqeaaNRQREKEKERYKRDREQWeRQRRELESRVAELKEELRQSREKHEELEEKYKELSASS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 527 TEIKQLRETklndentkyrnLLKQyelmRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKATnfelgl 606
Cdd:pfam07888 111 EELSEEKDA-----------LLAQ----RAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEE------ 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 607 aaqgfeqqkvvlEQKNSSLLASLQAAEENVHALgitNSELQNQLNVLEfthkektAFDSKTLTLtkqqleqtqfdlsltQ 686
Cdd:pfam07888 170 ------------EAERKQLQAKLQQTEEELRSL---SKEFQELRNSLA-------QRDTQVLQL---------------Q 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 687 EQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLAlfk 766
Cdd:pfam07888 213 DTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELHQARLQAAQLTLQLA--- 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 767 QNNEELTDKCSNIQNELHDLNRV----KTNWENLNTEhnLLQDKYAQQKEQMQHEhsnlaqiQAEHELLQESynkvkaEL 842
Cdd:pfam07888 290 DASLALREGRARWAQERETLQQSaeadKDRIEKLSAE--LQRLEERLQEERMERE-------KLEVELGREK------DC 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 843 NEIQitnLNEANAQYQDLLSAYELLQsnhnKLKQELQvlnqvnLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQAT 922
Cdd:pfam07888 355 NRVQ---LSESRRELQELKASLRVAQ----KEKEQLQ------AEKQELLEYIRQLEQRLETVADAKWSEAALTSTERPD 421
|
....*
gi 1802595060 923 PPVSD 927
Cdd:pfam07888 422 SPLSD 426
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
391-599 |
7.34e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 7.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 391 PVLQERIELLQNQntnlTQELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQnnlpEANQLNFVLEK-QLEQLQQDKHS 469
Cdd:COG4913 221 PDTFEAADALVEH----FDDLERAHEALEDAREQIELLEPIRELAERYAAARE----RLAELEYLRAAlRLWFAQRRLEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 470 LTLQIEQYKFDSKKHQEQLAlipSLRSEINSLETEVISLKQTNQRLSLIERENnfLKTEIKQLRETK--LNDENTKYRNL 547
Cdd:COG4913 293 LEAELEELRAELARLEAELE---RLEARLDALREELDELEAQIRGNGGDRLEQ--LEREIERLERELeeRERRRARLEAL 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1802595060 548 LKQYEL-----------MRADSDAKLKELEHEQHLAHQHHQE---QLAQLQRHNEALVKELDQVKA 599
Cdd:COG4913 368 LAALGLplpasaeefaaLRAEAAALLEALEEELEALEEALAEaeaALRDLRRELRELEAEIASLER 433
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
457-772 |
7.51e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.32 E-value: 7.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 457 EKQLEQLQQDKHSLTLQIEQYKFDSKKHQE-------------QLALIPSLRSEinsletevisLKQTNQRLSLIERENN 523
Cdd:COG3096 784 EKRLEELRAERDELAEQYAKASFDVQKLQRlhqafsqfvgghlAVAFAPDPEAE----------LAALRQRRSELERELA 853
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 524 FLKTEIKQLREtklndentKYRNLLKQYELMRadsdaklKELEHEQHLAHQHHQEQLAQLQRHNEALvkeldqvkatnfe 603
Cdd:COG3096 854 QHRAQEQQLRQ--------QLDQLKEQLQLLN-------KLLPQANLLADETLADRLEELREELDAA------------- 905
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 604 lgLAAQGFEQQKVVLEQKNSSLLASLQAAEENVHALGITNSELQNQLNVLefthkektafDSKTLTLTKQQLEQTQFDLS 683
Cdd:COG3096 906 --QEAQAFIQQHGKALAQLEPLVAVLQSDPEQFEQLQADYLQAKEQQRRL----------KQQIFALSEVVQRRPHFSYE 973
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 684 LTQEQLAtfkqQNQSLTDKLmasETQLNHLQQ----SDENLTQLQTQHEllqesynklqdeanhtqqQFHQAQNELDAAH 759
Cdd:COG3096 974 DAVGLLG----ENSDLNEKL---RARLEQAEEarreAREQLRQAQAQYS------------------QYNQVLASLKSSR 1028
|
330
....*....|....*..
gi 1802595060 760 ----QQLALFKQNNEEL 772
Cdd:COG3096 1029 dakqQTLQELEQELEEL 1045
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
657-954 |
7.83e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.32 E-value: 7.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 657 HKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQ------------QSD-ENLT-Q 722
Cdd:COG3096 283 LSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQtalrqqekieryQEDlEELTeR 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 723 LQTQHELLQEsynkLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKT-------NWEN 795
Cdd:COG3096 363 LEEQEEVVEE----AAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEKARAlcglpdlTPEN 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 796 LNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQitnLNEANAQYQDLLSAY---ELLQSNHN 872
Cdd:COG3096 439 AEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVE---RSQAWQTARELLRRYrsqQALAQRLQ 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 873 KLKQELQVLNQvNLEKQQLAQKLHNT-HQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALV 951
Cdd:COG3096 516 QLRAQLAELEQ-RLRQQQNAERLLEEfCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARI 594
|
...
gi 1802595060 952 HEL 954
Cdd:COG3096 595 KEL 597
|
|
| PRK10884 |
PRK10884 |
SH3 domain-containing protein; Provisional |
386-453 |
8.05e-03 |
|
SH3 domain-containing protein; Provisional
Pssm-ID: 182809 [Multi-domain] Cd Length: 206 Bit Score: 38.87 E-value: 8.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 386 QYDQSPVLQERIELLQNQNTNLTQELN-----------ELQQKLFKSQNnslLLARLEEENRTLKQHL---QNNLPEAN- 450
Cdd:PRK10884 84 QLSTTPSLRTRVPDLENQVKTLTDKLNnidntwnqrtaEMQQKVAQSDS---VINGLKEENQKLKNQLivaQKKVDAANl 160
|
...
gi 1802595060 451 QLN 453
Cdd:PRK10884 161 QLD 163
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
701-1019 |
8.94e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.05 E-value: 8.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 701 DKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQ 780
Cdd:PRK03918 148 EKVVRQILGLDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLE 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 781 NELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQEsynKVKaELNEIQitnlnEANAQYQDL 860
Cdd:PRK03918 228 KEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEE---KVK-ELKELK-----EKAEEYIKL 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 861 LSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQatppvsdelleqfnqvqlEK 940
Cdd:PRK03918 299 SEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELE------------------ER 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 941 QRLLQQNLALVHELQ-YFNELNSSQTHEIKTKQDETVKEVIIVEKEIPVLPEKKPRLKKRdivIENKEDALGKLSKKERI 1019
Cdd:PRK03918 361 HELYEEAKAKKEELErLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKE---IKELKKAIEELKKAKGK 437
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
379-846 |
9.42e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 39.88 E-value: 9.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 379 EQLAKPLQYDQS--PVLQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQNNLPEANQLN--- 453
Cdd:PRK01156 200 ENIKKQIADDEKshSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKele 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 454 ---------------------FVLEKQLEQLQQDKHSLTLQIEQYKFDSKKhqeqLALIPSLRSEINSLETEVISLKqtN 512
Cdd:PRK01156 280 erhmkiindpvyknrnyindyFKYKNDIENKKQILSNIDAEINKYHAIIKK----LSVLQKDYNDYIKKKSRYDDLN--N 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 513 QRLSLIERENNF--LKTEIKQLRETKLNDENTKYRNLLKQYELMR---ADSDAKLKELEhEQHLAHQHHQEQLAQLQRHN 587
Cdd:PRK01156 354 QILELEGYEMDYnsYLKSIESLKKKIEEYSKNIERMSAFISEILKiqeIDPDAIKKELN-EINVKLQDISSKVSSLNQRI 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 588 EALVKELDQVKaTNFELgLAAQG--------------------FEQQKVVLEQKNSSLLASLQAAEENVHAL-------- 639
Cdd:PRK01156 433 RALRENLDELS-RNMEM-LNGQSvcpvcgttlgeeksnhiinhYNEKKSRLEEKIREIEIEVKDIDEKIVDLkkrkeyle 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 640 GITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTdKLMASETQL---NHLQQS 716
Cdd:PRK01156 511 SEEINKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWL-NALAVISLIdieTNRSRS 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 717 DENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNN---EELTDKCSNIQNELHDLNRVKTNW 793
Cdd:PRK01156 590 NEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKiliEKLRGKIDNYKKQIAEIDSIIPDL 669
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1802595060 794 ENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQ 846
Cdd:PRK01156 670 KEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDIN 722
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
794-921 |
9.59e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 39.23 E-value: 9.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802595060 794 ENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYN---KVKAELNEIQITNLNEANAQYQDLLSAYELLQSN 870
Cdd:smart00787 147 EGLDENLEGLKEDYKLLMKELELLNSIKPKLRDRKDALEEELRqlkQLEDELEDCDPTELDRAKEKLKKLLQEIMIKVKK 226
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1802595060 871 HNKLKQELQ----VLNQVNLEKQQLAQKLHNTHQSLSQ----THAELTQLQAAYNNLQA 921
Cdd:smart00787 227 LEELEEELQelesKIEDLTNKKSELNTEIAEAEKKLEQcrgfTFKEIEKLKEQLKLLQS 285
|
|
| |
