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Conserved domains on  [gi|1799624468|gb|QHN51560|]
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ATP synthase F0 subunit 8 [Pomatoschistus microps]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009578)

ATP synthase F0 subunit 8 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 6.07e-27

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 177191  Cd Length: 55  Bit Score: 91.47  E-value: 6.07e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTPKTESWTWPW 54
Cdd:MTH00133   1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 6.07e-27

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 91.47  E-value: 6.07e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTPKTESWTWPW 54
Cdd:MTH00133   1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 1.71e-09

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 47.34  E-value: 1.71e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTPKTESWTWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 6.07e-27

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 91.47  E-value: 6.07e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTPKTESWTWPW 54
Cdd:MTH00133   1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-54 6.28e-17

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 66.15  E-value: 6.28e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTpKTESWTWPW 54
Cdd:MTH00072   1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQNKKN-KPESWNWPW 53
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-54 2.18e-15

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 62.38  E-value: 2.18e-15
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTPKTESWTWPW 54
Cdd:MTH00171   1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPNQTEKPKPNEWNWPW 54
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-54 3.51e-11

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 51.42  E-value: 3.51e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTPKTeSWTWPW 54
Cdd:MTH00123   1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKTNTTTNTT-PWTWPW 53
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 1.71e-09

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 47.34  E-value: 1.71e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTPKTESWTWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-47 6.67e-04

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 33.28  E-value: 6.67e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 1799624468  1 MPQLNPSPWFAIFMFSWLVFLIIVVPKVLNHTFPNEPALQSAQTPKT 47
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQ 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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