|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
1.46e-175 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 490.86 E-value: 1.46e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 1 MNPYILALLLFGLLLGTGVTATSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWL 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 81 TGQWDIQLMTHPLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIPTPHPEVLIVLGLLS 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLITLGLTS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLIT 240
Cdd:MTH00135 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 241 SIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTLTLSPNSVSGTPIWRLASGK 320
Cdd:MTH00135 241 ALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQ 320
|
....*
gi 1799624465 321 ITMPM 325
Cdd:MTH00135 321 LTLPL 325
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-316 |
3.09e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 368.09 E-value: 3.09e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 1 MNPYILALLLFGLLLGTGVTATSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWL 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 81 TGQWDIQLMTHPLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI-PTPHPEVLIVLGLL 159
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQIsHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLI 239
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1799624465 240 TSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTLTLSPNSVSGTPIWRL 316
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRF 317
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
1.23e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 333.71 E-value: 1.23e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 1 MNPYILALLLFGLLLGTGVTATSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWL 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 81 TGQWDIQLMTHPLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI-PTPHPEVLIVLGLL 159
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTsNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLI 239
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 240 TSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTLTLSPNSVSGTPIWRLASG 319
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
....*
gi 1799624465 320 KITMP 324
Cdd:MTH00112 321 KNTLT 325
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-307 |
7.84e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 329.11 E-value: 7.84e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 1 MNPYILALLLFGLLLGTGVTATSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWL 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 81 TGQWDIQLMTHPLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI-PTPHPEVLIVLGLL 159
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQIsPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLI 239
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1799624465 240 TSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTLTLSPNS 307
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPST 308
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-321 |
3.39e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 289.18 E-value: 3.39e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 1 MNPYILALLLFGLLLGTGVTATSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWL 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 81 TGQWDIQLMTHPLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIPT-PHPEVLIVLGLL 159
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPaLNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLI 239
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 240 TSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTLTLSPNSVSGTPIWRLASG 319
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
..
gi 1799624465 320 KI 321
Cdd:MTH00200 321 SN 322
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
22-306 |
1.47e-71 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 226.35 E-value: 1.47e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 22 TSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWLTGQWDIQLMTHPLPTTLIILA 101
Cdd:MTH00041 22 SSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLSSIIITLA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 102 LALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI-PTPHPEVLIVLGLLSTLVGGWGGLNQTQLRKILAY 180
Cdd:MTH00041 102 LALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIsNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAF 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 181 SSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLITSIAPLLLLSLGGLPPMTGFL 260
Cdd:MTH00041 182 SSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFL 261
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1799624465 261 PKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTLTLSPN 306
Cdd:MTH00041 262 NKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
23-306 |
3.45e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 173.09 E-value: 3.45e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 23 SSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWLTGqwdiqlMTHPLPTTLIILAL 102
Cdd:MTH00160 24 SNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM------LFNNISSMLINSSL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 103 ALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIPTPhpEVLIVLGLLSTLVGGWGGLNQTQLRKILAYSS 182
Cdd:MTH00160 98 LLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINN--NFIIIIIILSAIIGAIGGLNQTSLRKILAYSS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 183 IAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLITSIAPLLLLSLGGLPPMTGFLPK 262
Cdd:MTH00160 176 INHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPK 255
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1799624465 263 WLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTLTLSPN 306
Cdd:MTH00160 256 WIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNK 299
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
19-304 |
2.11e-48 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 165.83 E-value: 2.11e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 19 VTATSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWLTGQWDIQLMthplpttlI 98
Cdd:MTH00144 19 LSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSMSL--------L 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 99 ILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIPTPHPEV--LIVLGLLSTLVGGWGGLNQTQLRK 176
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAylLCVISVLSALVGSIGGLNQTQVRA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 177 ILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALaTSWAKAPLITSIAPLLLLSLGGLPPM 256
Cdd:MTH00144 171 LLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL-GSLKPSYKTGLSIISLLLSLGGLPPF 249
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1799624465 257 TGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTLTLS 304
Cdd:MTH00144 250 LGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSS 297
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
19-325 |
2.71e-41 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 147.23 E-value: 2.71e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 19 VTATSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASvtnawlTGQWDIQLMTHPLPTTLI 98
Cdd:MTH00011 21 MALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLKNITALML 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 99 ILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIPTPHPEVLIV-LGLLSTLVGGWGGLNQTQLRKI 177
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTsMAAMSALAGGLGGMNQTQLRPL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 178 LAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLITSIAPLLLLSLGGLPPMT 257
Cdd:MTH00011 175 LAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFT 254
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1799624465 258 GFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMTlTLSPNSVSGTPIWRLASGKITMPM 325
Cdd:MTH00011 255 GFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFM-YLSPTFSSLKSAPYEPKTKILISM 321
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
23-297 |
2.23e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 144.43 E-value: 2.23e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 23 SSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLlfasvtnawLTGQWDIQ--LMTHPLPTTLIIL 100
Cdd:MTH00197 17 SSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALL---------LMGGSLSFsnLYLSLLSVVLVIL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 101 ALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIpTPHPEVLIVLGLLSTLVGGWGGLNQTQLRKILAY 180
Cdd:MTH00197 88 GLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFN-SSSFMGLLICSVLSSLIGGIGGMNQSNIRQLLAY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 181 SSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLSTFMIFSFNKATTVNALATSWAKAPLITSIAPLLLLSLGGLPPMTGFL 260
Cdd:MTH00197 167 SSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFF 246
|
250 260 270
....*....|....*....|....*....|....*..
gi 1799624465 261 PKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSY 297
Cdd:MTH00197 247 LKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
23-295 |
1.48e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 108.19 E-value: 1.48e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 23 SSHWLLAWMGLEINTLAIIPLMTRHHHP-RAIEAATKYF-------------LTQATAAATLLFASVTNAWLTGQWDIQL 88
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFvlgalssglflfgCALLCGTTGGLHLSYINLVLNSGQSFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 89 MTHPLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIpTPHPEVLIVLGLLSTLVGGWGG 168
Cdd:MTH00196 92 VSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSI-GLNVNILLIGGLFSLFVGAIGA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 169 LNQTQLRKILAYSSIAHLGWMLLVVQF----SPSLTLLALGTYLVMTLSTFMI---FSFNKATTVNALATSwAKAPLITS 241
Cdd:MTH00196 171 LNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFSIilaLNVYKNLIIEFSGLS-RRLPILAI 249
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1799624465 242 IAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRL 295
Cdd:MTH00196 250 TLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
19-299 |
1.54e-22 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 97.88 E-value: 1.54e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 19 VTATSSHWLLAWMGLEINTLAIIPL-MTRHHHPRAIEAATKYFLTqataaatllfASVTNAWL----------TGQWDIQ 87
Cdd:COG1007 117 LMASANDLLTLFLGLELLSLSLYVLvAFRRDDRRSSEAALKYFLL----------GALSSGFLlygisllygaTGSLNLA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 88 LMTHPLPTT------------LIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI-----PTPHP 150
Cdd:COG1007 187 GIAAALAAGganspllllglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLlveafPGLAA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 151 E---VLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVV----QFSPSLTLLALGTYLVMTLSTFMIFSF--- 220
Cdd:COG1007 267 DwqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagtPLGVSAALFYLLAYLFMNLGAFAVILLlsr 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 221 --NKATTVNALATSWAKAPLITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYA 298
Cdd:COG1007 347 kgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
.
gi 1799624465 299 M 299
Cdd:COG1007 427 M 427
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-285 |
1.23e-20 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 90.45 E-value: 1.23e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 23 SSHWLLAWMGLEINTLAIIPLMT-RHHHPRAIEAATKYFLTQATAAATLLFASVTNAWLTGQWDIQLMTHPLPTT----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 97 ------LIILALALKIGLAPLHTWLPEVLQGLDLT-TGLVLSTWQKLAPFALLVQIPTPHPE------VLIVLGLLSTLV 163
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 164 GGWGGLNQTQLRKILAYSSIAHLGWMLLVV----QFSPSLTLLALGTYLVMTLSTF-----MIFSFNKATTVNALATSWA 234
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1799624465 235 KAPLITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTA 285
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
22-295 |
3.57e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 88.15 E-value: 3.57e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 22 TSSHWLLAWMGLEINTLAIIPLMTRHHHP-RAIEAATKYFLTQATAAATLLFASVTNAWLTGQWDIQ----LMTHPLPTT 96
Cdd:MTH00199 115 SSINWLSIYLAIELQTLTLFILVALKRDSaYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQginsILTGDVGKI 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 97 LIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIpTPHPEVLIVLGLLSTLVGGWGGLNQTQLRK 176
Cdd:MTH00199 195 LITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQI-GPVTNVVLICAVLSIIYGAIGALNQTKIKR 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 177 ILAYSSIAHLGWMLLVVQF----SPSLTLLALGTYLVMTLSTFMI---FSFNKATTVNALATSwAKAPLITSIAPLLLLS 249
Cdd:MTH00199 274 LLAYSGIGHMGFILFGVAIgsfeSIQASLIYMIIYVIMSICSFSIilsLKLTKGLIVEVSGLS-RKNPVIALTLALTFLS 352
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1799624465 250 LGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRL 295
Cdd:MTH00199 353 IAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
19-299 |
1.01e-18 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 86.80 E-value: 1.01e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 19 VTATSSHWLLAWMGLEINTLAIIPL-MTRHHHPRAIEAATKYFLTQAT--------------AAATLLFASVTNAWLTGQ 83
Cdd:PRK05777 118 VMVSANDLLTLFLGLELLSLPLYALaALRRDRRRSLEAAIKYFVLGALasgfllygmsllygATGSLSFAGIAKALADGS 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 84 WDIQLMThpLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI-----PTPHPE---VLIV 155
Cdd:PRK05777 198 GNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLlvvafGGLSEDwqqVLAI 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 156 LGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVV----QFSPSLTLLALGTYLVMTLSTFMIFSFNK-----ATTV 226
Cdd:PRK05777 276 IAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLaagtAEGYSAVLFYLLAYLFMTLGAFGVISLLRrkggeAESI 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1799624465 227 NALATSWAKAPLITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAM 299
Cdd:PRK05777 356 SDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLM 428
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
97-299 |
1.13e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 80.76 E-value: 1.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 97 LIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI--------PTPHPEVLIVLGLLSTLVGGWGG 168
Cdd:TIGR01770 208 LILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLflyilfgfSEAWQIFLAIIAFLSMLIGNFGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 169 LNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALG----TYLVMTLSTFMIFS------FNKATTVNALATSWAKAPL 238
Cdd:TIGR01770 288 LAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLfyifIYALMSLGAFGVLSllrsykDEWIEYISDFAGLFKTNPI 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1799624465 239 ITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAM 299
Cdd:TIGR01770 368 LAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVM 428
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-299 |
3.06e-14 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 73.26 E-value: 3.06e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 30 WMGLEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWLTGQWDIQLMTHPLPT----------TLII 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEldpglllaafALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 100 LALALKIGLAPLHTWLPE-----------VLQGLDLTTGLVLstwqkLAPFALLVQIPTPHP---EVLIVLGLLSTLVGG 165
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVYA-----ILRVLTLLFGADPALflgTLLLVLGLLTMLVGA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 166 WGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMT--------LSTFMIFSFNKATTVNALATSWAKAP 237
Cdd:COG0651 288 LGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHalakallfLAAGAIERATGTRDLDKLGGLGKRMP 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1799624465 238 LITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAM 299
Cdd:COG0651 368 LTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
23-214 |
1.44e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 65.65 E-value: 1.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 23 SSHWLLAWMGLEINTLAIIPLMTRHHHPRAI---------EAATKYFLTQATAAATLLFASVTNAWLTGQ---------- 83
Cdd:MTH00198 207 SANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNegmlgtilsa 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 84 ----WDIQLMTHPLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIPTPhPEVLIVLGLL 159
Cdd:MTH00198 287 tletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVIT-SKLLLSVAII 365
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1799624465 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLST 214
Cdd:MTH00198 366 SLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVS 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
92-299 |
2.22e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 58.44 E-value: 2.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 92 PLPTTLIILALAL-----KIGLAPLHTWLPEV-----------LQGLDLTTG---------LVLSTWQKLAPFALLVQIp 146
Cdd:PRK12667 218 PPLALGVALALALwaftiKAAIFPNHFWLPDAhpaapspvsamLSGLVVNVGayaiirflyTIFGISPSLIDFRAALSP- 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 147 tphpeVLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLV--------MTLSTFMIF 218
Cdd:PRK12667 297 -----ILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiakslLFLASGVFI 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 219 SFNKATTVNALATSWAKAPLITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYA 298
Cdd:PRK12667 372 HAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
.
gi 1799624465 299 M 299
Cdd:PRK12667 452 L 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-191 |
4.33e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 57.64 E-value: 4.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 50 PRAIEAATKYFLTQATAAATLLFASVTNAWLTGQ-WDI-QLMTHPLPTTL-------IILALALKIGLAPLHTWLPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLlELLNLPLPFGVqtwlflaFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1799624465 120 QGLDLTTGLVLSTWQKLAPFALLVQIPTPHPE-------VLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLL 191
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDaslyfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
97-299 |
5.67e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 57.37 E-value: 5.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 97 LIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI-----PTPHPE---VLIVLGLLSTLVGGWGG 168
Cdd:PRK02504 215 FVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLlvtafPSFDEQwklLFTALAILSMVLGNVVA 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 169 LNQTQLRKILAYSSIAHLGWML--LVV--QFSPSLTLLALGTYLVMTLSTFM---IFSFNKAT-TVNALATSWAKAPLIT 240
Cdd:PRK02504 295 LAQTSMKRMLAYSSIGQAGFVMigLVAgtEAGYASMVFYLLAYLFMNLGAFAcviLFSLRTGTdQISDYAGLYQKDPLLT 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1799624465 241 SIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAM 299
Cdd:PRK02504 375 LGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVIKMM 433
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-191 |
5.42e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 54.32 E-value: 5.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 49 HPRAIEAATKYFLTQATAAATLLFASVTNAWLTGQW--DI-QLMTHPLPTT-------LIILALALKIGLAPLHTWLPE- 117
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIaELAAAPLPLTaqlllflAFFIAFAVKVPMFPFHTWLPDa 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 118 ----------VLQGLDLTTG----------LVLSTWQKLAPFallvqiptphpevLIVLGLLSTLVGGWGGLNQTQLRKI 177
Cdd:COG1008 236 hveaptagsvLLAGVLLKMGgygllrfalpLFPEASAYFAPL-------------LAALGVIGIIYGALVALAQTDLKRL 302
|
170
....*....|....
gi 1799624465 178 LAYSSIAHLGWMLL 191
Cdd:COG1008 303 IAYSSVSHMGFVLL 316
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-203 |
7.58e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 53.73 E-value: 7.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 97 LIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLS-TWQKLAPFAL---LVQIPTPHP-------EVLIVLGLLSTLVGG 165
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALiriYFTVFGGDFrfalglgWLLAVLALLSMLVGS 286
|
90 100 110
....*....|....*....|....*....|....*...
gi 1799624465 166 WGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLA 203
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAA 324
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
97-295 |
8.16e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 53.47 E-value: 8.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 97 LIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQI-----PTPHPE---VLIVLGLLSTLVGGWGG 168
Cdd:CHL00049 219 FITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIfdipfYFSSNEwhlLLEILAILSMILGNLIA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 169 LNQTQLRKILAYSSIAHLGWMLL-VVQFSPSLTLLALGTYLV----MTLSTF---MIFSFNKAT-TVNALATSWAKAPLI 239
Cdd:CHL00049 299 ITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNDGYASMITYMLfyifMNLGTFaciVLFGLRTGTdNIRDYAGLYTKDPFL 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1799624465 240 TSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRL 295
Cdd:CHL00049 379 ALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
97-301 |
2.84e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 51.92 E-value: 2.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 97 LIILALALKIGLAPLHTWLPE-----------VLQGLDLTTGL--------VLSTWQKLAPFALLVQIPTPHpEVLIVLG 157
Cdd:PRK08668 201 FLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGAygfllvlyVLPGTKLFSEFGTYRGVPLFN-YILAWLG 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 158 LLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVvqfspsltlLALGTYLVMTLSTFMIFSFNKATTVNALATSWA--- 234
Cdd:PRK08668 280 NISIIVGTLMAILQEDIKKLIAYSSVANGGYILVG---------LGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAViyr 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 235 --------------KAPLITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRLSYAMT 300
Cdd:PRK08668 351 tgttkisemgglieKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLAGVF 430
|
.
gi 1799624465 301 L 301
Cdd:PRK08668 431 L 431
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-191 |
3.22e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 48.77 E-value: 3.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 20 TATSSHWLLAWMGLEINTLAIIPLMTRHHHPRAIEAATKYF----------LTQATAAATLLFASVTNAWLTGQW-DIQL 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafaLFGTILVYANAATVMGDGEMAILWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 89 MTHPLPTTLIILALAL-------KIGLAPLHTWLPE-----------VLQGLDLTTGL-VLSTWQKLAPFALLVQIPTPh 149
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyAVLRYYILIDAAIGSDFPGR- 282
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1799624465 150 peVLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLL 191
Cdd:PRK06458 283 --LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-202 |
8.85e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 47.40 E-value: 8.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 96 TLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLS-TWQKLAPFALLVQIPTPHPEV-------LIVLGLLSTLVGGWG 167
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGgVLAKLGTYGLLRFGLQLFPQTwslvapgLAIIGTISVIYGALS 288
|
90 100 110
....*....|....*....|....*....|....*
gi 1799624465 168 GLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLL 202
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLL 323
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
96-191 |
1.40e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 46.67 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 96 TLIILALALKIGLAPLHTWLPE-----------VLQGLDLTTGLVlstwQKLAPFALLVQ--IPTPHPEVLIVLGLLSTL 162
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAayakapsvvsaLLSGTVLNIGIY----GILRLSALLRQsgAAEQFSNVLIGLGIFSIA 285
|
90 100
....*....|....*....|....*....
gi 1799624465 163 VGGWGGLNQTQLRKILAYSSIAHLGWMLL 191
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-191 |
1.41e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.73 E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 50 PRAIEAATKYFL-TQA---TAAATLLFASVTNAWLTGQWDI-QLMTHPLPT---TLIILAL----ALKIGLAPLHTWLPE 117
Cdd:PRK05846 157 KNRIYAATKFFLyTLLgslLMLVAIIYLVVVYYNATGTFDIaDLLNLPLPPgvqYWLFLAFfiafAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 118 VLQ-----GLDLTTGLVLstwqKLAPFALL----------VQIPTPhpeVLIVLGLLSTLVGGWGGLNQTQLRKILAYSS 182
Cdd:PRK05846 237 AHVqaptaGSVLLAGILL----KMGAYGLLrfslplfpdaSHEFAP---IIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
....*....
gi 1799624465 183 IAHLGWMLL 191
Cdd:PRK05846 310 ISHMGFVTL 318
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
290-324 |
3.11e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 41.09 E-value: 3.11e-05
10 20 30
....*....|....*....|....*....|....*
gi 1799624465 290 YFYLRLSYAMTLTLSPNSVSGTPIWRLASGKITMP 324
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLL 35
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-206 |
3.41e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 45.47 E-value: 3.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 33 LEINTLAIIPLMT-RHHHPRAIEAATKYFLTQATAAATLLfasVTNAWLTGQWD------IQLMTHPLPTTLIILALAL- 104
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVL---LGIALLYGQYGtlnmayLAVKMSENPTVVAKIALALf 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 105 ------KIGLAPLHTWLPEVLQGL--DLTTGLVLSTWQKL-APFALLVQIPTPH------PEVLIVLGLLSTLVGGWGGL 169
Cdd:PRK08376 227 iaglamKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLyALARVLFSIYGPAinlatvGWVIIILGCLTMFVGVAMAV 306
|
170 180 190
....*....|....*....|....*....|....*..
gi 1799624465 170 NQTQLRKILAYSSIAHLGWMLLVVqfspSLTLLALGT 206
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLGL----GVGLAALGD 339
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-203 |
5.99e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.91 E-value: 5.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 81 TGQWDI-QLMTHPLPTTLIILALAL-------KIGLAPLHTWLPE-----------------VLQGLDLTTglvlstwqK 135
Cdd:PRK12644 184 AGTYRLsELLADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGamaaptpvsaylhaaamVKAGIYLVA--------R 255
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1799624465 136 LAP-FAllvQIPTPHPeVLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLA 203
Cdd:PRK12644 256 LAPgFA---DVPVWRP-TVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALA 320
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-307 |
8.18e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 44.30 E-value: 8.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 111 LHTWLPEVLQGLD-----------LTTGLVL----STWQKLAPFALLVqiptphpevLIVLGLLSTLVGGWGGLNQTQLR 175
Cdd:MTH00020 229 LHTWLPDAMEGPTpvsalihaatmVTAGVFLlirsSPLFEQAPLALII---------VTIVGSLTVFFAATVGLVQNDLK 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 176 KILAYSSIAHLGWMLLVVQFSpsltLLALGTYLVMTLSTFMIFSFNKATTV-NALATSW---------AKAPLITSIAPL 245
Cdd:MTH00020 300 KVIAYSTCSQLGYMVVACGLS----HYSISLFHLMNHAFFKALLFLSAGSViHALSDEQdmrkmggliSFLPLTYIFFLI 375
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1799624465 246 LLLSLGGLPPMTGFLPKWLILqELTKQQLPLTAV--LAAFTALLSLYFYLRLSYaMTLTLSPNS 307
Cdd:MTH00020 376 GSLSLMGFPYLTGFYSKDLIL-ELAFGQYYLIFAywLGCFSALLTAFYSIRLIY-LTFLSNTNL 437
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
99-191 |
8.96e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 44.25 E-value: 8.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 99 ILALALKIGLAPLHTWLPE-----------VLQGLDLttglvlstwqKLAPFALL---VQI-PTPH---PEVLIVLGLLS 160
Cdd:PRK12561 192 LIAFGVKLPIFPLHTWLPDahgeasapvsmILAGVLL----------KMGGYALIrfnVQMlPDAHvyfAPALAILGVVN 261
|
90 100 110
....*....|....*....|....*....|.
gi 1799624465 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMLL 191
Cdd:PRK12561 262 IIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-302 |
1.31e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.57 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 85 DIQLMTHPLPTTLII--------LALALKIGLAPLHTWLPEVLQGLDLTTGLVLS-TWQKLAPF-----------ALLVQ 144
Cdd:PRK12662 194 DMFLIIQDLPTNRAIqigvlfimVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYliirivydvfkANFVF 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 145 IPTPHPEVLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLV----MTLSTFMI--- 217
Cdd:PRK12662 274 TTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFMVsgs 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 218 --FSFNKaTTVNALATSWAKAPLITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLPLTAVLAAFTALLSLYFYLRL 295
Cdd:PRK12662 354 isYHFGT-TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
....*..
gi 1799624465 296 SYAMTLT 302
Cdd:PRK12662 433 VEALYFE 439
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-190 |
2.91e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 42.57 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 50 PRAIEAATKYFLTQATAAATLLFASVTNAWLTGQWDIQLM--THPLPTTLIILALALKIGLAPLHTWLPEVLQGLDLTTG 127
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIagLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGS 218
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1799624465 128 LVLSTW-QKLAPFALLVQIPTphPEVLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWML 190
Cdd:PRK12668 219 VFLSAFtTKTAVYALARAFPG--TELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMV 280
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
80-213 |
3.59e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 42.41 E-value: 3.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 80 LTGQWDIQLMTHP-----LPTTLIILALALKIGLAPLHTWLPEVLQGLD-----LTTGLVLstwqKLAPFAL---LVQIP 146
Cdd:PRK08667 188 QTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPsnvsaLMSGVML----KVAVYGLvrfLMDVL 263
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1799624465 147 TPHPE---VLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLG--------WMLLVVQFSPSLTLLALGTYLVMTLS 213
Cdd:PRK08667 264 SPELWwgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLDTLALLALGGALFHSLN 341
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
152-193 |
4.19e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 42.06 E-value: 4.19e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1799624465 152 VLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVV 193
Cdd:COG1009 277 VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL 318
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-191 |
4.60e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 41.86 E-value: 4.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 33 LEINTLAIIPLMTRHHHPRAIEAATKYFLTQATAAATLLFASVTNAWLTGQWDIQ--LMTHPLPTTLIILALALKIGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSglATADPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 111 LHTWLPEVLQGLDLTTGLVLS-TWQKLAPFALL-VQIPTPHPEVLI-VLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLG 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSgVVVKAGVFPLVrCALDVPGLDLIVrIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
....
gi 1799624465 188 WMLL 191
Cdd:PRK07234 283 FILA 286
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-265 |
8.93e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.84 E-value: 8.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 55 AATKYFLTQATAAATLLFASVTNAWLTGQWDI---QLMTHPLPTT-------LIILALALKIGLAPLHTWLPE------- 117
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHTLPLStqllllaPILVGFGIKIPLVPFHTWLPDahveast 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 118 ----VLQG--LDLTT--------GLVLSTWQKLAPFallvqiptphpevLIVLGLLSTLVGGWGGLNQTQLRKILAYSSI 183
Cdd:PRK06473 238 pvsvLLAGvlLKLGTygllrfgvGLFPEAWVYLAPW-------------LATWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 184 AHLGWMLLVVQFSPSLTLLALGTYLVM-TLSTFMIF-----SFNKATTVN-----ALATSWAKAPLITSIAPLLLLSLGG 252
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMIShGLISALLFllvgvVYKKTGSRDvdvlrGLLNPERGLPITGSLMILGVMASAG 384
|
250
....*....|...
gi 1799624465 253 LPPMTGFLPKWLI 265
Cdd:PRK06473 385 IPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-187 |
1.95e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.90 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 98 IILALALKIGLAPLHTWLPE-----------VLQGLDLTTG---LVLSTW-------QKLAPfallvqiptphpeVLIVL 156
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKahveapvagsvLLAGILLKLGgygLVRLSWpilplgaQNLAP-------------AVIAM 302
|
90 100 110
....*....|....*....|....*....|.
gi 1799624465 157 GLLSTLVGGWGGLNQTQLRKILAYSSIAHLG 187
Cdd:MTH00226 303 GIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-193 |
2.30e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 39.94 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 111 LHTWLPEVLQGLDLTTGLV-LSTWQKLAPFALLVQIP----TPHPEVLI-VLGLLSTLVGGWGGLNQTQLRKILAYSSIA 184
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIhAATMVTAGVFLMIRSFPlfekAPLTLLIItIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
....*....
gi 1799624465 185 HLGWMLLVV 193
Cdd:MTH00032 324 QLGYMVLII 332
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
97-227 |
2.50e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 39.08 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 97 LIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTWQKLAPFALLVQIPTPHPEVLIVLGLLSTLVGGWgglNQTQLRK 176
Cdd:MTH00091 62 FQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQMF---LLKSYKN 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1799624465 177 ILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLVMTLstFMIFSFNKATTVN 227
Cdd:MTH00091 139 LLILSSTESFNWLILSFFFSFFNVFFLFFYYFLLML--FLIPKFNNVNKLN 187
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
153-316 |
2.56e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.41 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 153 LIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSPSLTLLALGTYLV--------MTLSTFMIFSFNKAT 224
Cdd:PRK06589 283 LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVshsfakicLFYSMGSIYSLKKED 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 225 TVNALATSWAKAPLITSIAPLLLLSLGGLPPMTGFLPKWLILQELTKQQLP-----LTAVLAAFTALLSLYFYLRLSYAM 299
Cdd:PRK06589 363 QVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPwlsiiVMLVVIASSILSALYLLKILSSIY 442
|
170
....*....|....*...
gi 1799624465 300 TLTLSPNS-VSGTPIWRL 316
Cdd:PRK06589 443 KPSLSENSfITKSLPYLM 460
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-210 |
2.97e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 39.26 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 100 LALALKIGLAPLHTWLPE-----------VLQGLDLTTG---LVLSTWQKLAP----FALLVQIptphpevlivLGLLST 161
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQahveapvagsvILAGVLLKLGgygFIRFSWPLLPEaseyFSPLIQT----------LSLLAI 283
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1799624465 162 LVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVqFSPSLTLLALGTYLVM 210
Cdd:MTH00217 284 IYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGI-FSHTIQGLVAAIFLML 331
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
99-191 |
3.09e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 39.30 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 99 ILALALKIGLAPLHTWLPEVLQGLD-----LTTGLVLstwqKLAPFALLV----QIPTPHPE---VLIVLGLLSTLVGGW 166
Cdd:PRK02546 220 LIAYGVKLPIVPLHTWLPDAHGEATapvhmLLAGILL----KMGGYALLRmnagMLPDAHAQfapLLIVLGVVNIIYAAL 295
|
90 100
....*....|....*....|....*
gi 1799624465 167 GGLNQTQLRKILAYSSIAHLGWMLL 191
Cdd:PRK02546 296 TSFAQRNLKRKIAYSSISHMGFVLI 320
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
96-219 |
5.60e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.59 E-value: 5.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 96 TLIILALALKIGLAPLHTWLPEVLQGLDLTTGLVLSTW-QKLAPFAL-----LVQIPTPHPEVL---IVLGLLSTLVGGW 166
Cdd:PRK08377 210 ALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFvVKAGLYAMarilyLMQNANGWSSVLklvIIMATLTVFFAEL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1799624465 167 GGLNQTQLRKILAYSSIAHLGWMLLVvqfspsltlLALGTYLVMTLSTFMIFS 219
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALA---------LALGTQAGVDAGVFHMIN 333
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
152-213 |
8.13e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 38.10 E-value: 8.13e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1799624465 152 VLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLLVVQFSpslTLLALGTYLVMTLS 213
Cdd:PRK12650 274 LLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVG---TPFALTAAVVHTLA 332
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
93-191 |
9.16e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 38.03 E-value: 9.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799624465 93 LPTTLIILALALKIGLA------PLHTWLPEVLQGLD-----------LTTGLVL----STWQKLAPFALLvqiptphpe 151
Cdd:TIGR01974 208 FFSALTLICLLLFIGAMgksaqlPLHTWLPDAMEGPTpvsalihaatmVTAGVYLvartSPLFELSPTALY--------- 278
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1799624465 152 VLIVLGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMLL 191
Cdd:TIGR01974 279 LVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFL 318
|
|
|