bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR [Gordonia pseudamarae]
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase( domain architecture ID 10788351)
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
PyrR | COG2065 | Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide ... |
11-185 | 6.21e-93 | ||||
Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine salvage : Pssm-ID: 441668 Cd Length: 178 Bit Score: 268.46 E-value: 6.21e-93
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Name | Accession | Description | Interval | E-value | ||||
PyrR | COG2065 | Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide ... |
11-185 | 6.21e-93 | ||||
Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine salvage Pssm-ID: 441668 Cd Length: 178 Bit Score: 268.46 E-value: 6.21e-93
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PRK05205 | PRK05205 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR; |
11-185 | 8.57e-88 | ||||
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR; Pssm-ID: 235365 Cd Length: 176 Bit Score: 255.44 E-value: 8.57e-88
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Pribosyltran | pfam00156 | Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl ... |
44-158 | 1.15e-13 | ||||
Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase. Hypoxanthine phosphoribosyl-transferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyl-transferase EC:2.4.2.10. Uracil phosphoribosyl-transferase EC:2.4.2.9. Xanthine-guanine phosphoribosyl-transferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain. Pssm-ID: 425489 [Multi-domain] Cd Length: 150 Bit Score: 65.08 E-value: 1.15e-13
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PRTases_typeI | cd06223 | Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The ... |
44-149 | 1.50e-11 | ||||
Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrophosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22. Pssm-ID: 206754 [Multi-domain] Cd Length: 130 Bit Score: 58.95 E-value: 1.50e-11
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Name | Accession | Description | Interval | E-value | ||||
PyrR | COG2065 | Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide ... |
11-185 | 6.21e-93 | ||||
Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine salvage Pssm-ID: 441668 Cd Length: 178 Bit Score: 268.46 E-value: 6.21e-93
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PRK05205 | PRK05205 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR; |
11-185 | 8.57e-88 | ||||
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR; Pssm-ID: 235365 Cd Length: 176 Bit Score: 255.44 E-value: 8.57e-88
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Pribosyltran | pfam00156 | Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl ... |
44-158 | 1.15e-13 | ||||
Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase. Hypoxanthine phosphoribosyl-transferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyl-transferase EC:2.4.2.10. Uracil phosphoribosyl-transferase EC:2.4.2.9. Xanthine-guanine phosphoribosyl-transferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain. Pssm-ID: 425489 [Multi-domain] Cd Length: 150 Bit Score: 65.08 E-value: 1.15e-13
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PRTases_typeI | cd06223 | Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The ... |
44-149 | 1.50e-11 | ||||
Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrophosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22. Pssm-ID: 206754 [Multi-domain] Cd Length: 130 Bit Score: 58.95 E-value: 1.50e-11
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HptA | COG0634 | Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]; ... |
11-163 | 1.19e-09 | ||||
Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]; Hypoxanthine-guanine phosphoribosyltransferase is part of the Pathway/BioSystem: Purine salvage Pssm-ID: 440399 Cd Length: 176 Bit Score: 55.03 E-value: 1.19e-09
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PRK09162 | PRK09162 | hypoxanthine-guanine phosphoribosyltransferase; Provisional |
13-163 | 3.03e-09 | ||||
hypoxanthine-guanine phosphoribosyltransferase; Provisional Pssm-ID: 181675 Cd Length: 181 Bit Score: 53.71 E-value: 3.03e-09
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Hpt1 | COG2236 | Hypoxanthine phosphoribosyltransferase [Coenzyme transport and metabolism]; Hypoxanthine ... |
8-164 | 1.33e-06 | ||||
Hypoxanthine phosphoribosyltransferase [Coenzyme transport and metabolism]; Hypoxanthine phosphoribosyltransferase is part of the Pathway/BioSystem: Purine salvage Pssm-ID: 441837 [Multi-domain] Cd Length: 153 Bit Score: 45.99 E-value: 1.33e-06
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COG1926 | COG1926 | Predicted phosphoribosyltransferase [General function prediction only]; |
100-142 | 2.83e-04 | ||||
Predicted phosphoribosyltransferase [General function prediction only]; Pssm-ID: 441529 Cd Length: 209 Bit Score: 40.06 E-value: 2.83e-04
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PRK02277 | PRK02277 | orotate phosphoribosyltransferase-like protein; Provisional |
102-155 | 1.05e-03 | ||||
orotate phosphoribosyltransferase-like protein; Provisional Pssm-ID: 235023 [Multi-domain] Cd Length: 200 Bit Score: 38.31 E-value: 1.05e-03
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PyrE | COG0461 | Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]; Orotate ... |
104-147 | 1.27e-03 | ||||
Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]; Orotate phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine biosynthesis Pssm-ID: 440229 Cd Length: 201 Bit Score: 38.21 E-value: 1.27e-03
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PRK06031 | PRK06031 | phosphoribosyltransferase; Provisional |
11-156 | 1.47e-03 | ||||
phosphoribosyltransferase; Provisional Pssm-ID: 235678 Cd Length: 233 Bit Score: 38.20 E-value: 1.47e-03
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pyrE | PRK00455 | orotate phosphoribosyltransferase; Validated |
104-147 | 3.80e-03 | ||||
orotate phosphoribosyltransferase; Validated Pssm-ID: 234771 Cd Length: 202 Bit Score: 36.67 E-value: 3.80e-03
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ComFC | COG1040 | DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain [General ... |
18-143 | 5.14e-03 | ||||
DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain [General function prediction only]; Pssm-ID: 440662 [Multi-domain] Cd Length: 196 Bit Score: 36.34 E-value: 5.14e-03
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Blast search parameters | ||||
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