|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
5-570 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 615.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 5 MKLSSLSSLFLFLYSISIFPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAG 84
Cdd:MTH00151 1 LKMSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 85 DKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVL 164
Cdd:MTH00151 81 DPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 165 QGHWVVVLMWNFAFNGCVVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFN 244
Cdd:MTH00151 161 LGHWSILSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 245 FYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQ 324
Cdd:MTH00151 241 SFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 325 DLRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSP 404
Cdd:MTH00151 321 DIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 405 YMGVSMHMKHESDVYVNVSTSVLAVLAIISGMFLQMFFVSFeISCVMIPESIKYFFMGLVVSGLVIGYMMCQENHLSKSV 484
Cdd:MTH00151 401 MKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGF-SEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKM 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 485 SKLQTFFGSMWFLFYLSAQPLTKFSMVMSSYLLKSVEFGWMEVFGGGGSLKLLSNLSQFNQSIQMKSFNLLVGMMFFTSL 564
Cdd:MTH00151 480 VKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVL 559
|
....*.
gi 1790939206 565 TLIVVS 570
Cdd:MTH00151 560 FLVVIS 565
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
20-569 |
5.96e-176 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 509.69 E-value: 5.96e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 20 ISIFPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFV 99
Cdd:MTH00207 19 ILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFV 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 100 LSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHWVVVLMWNFAFN 179
Cdd:MTH00207 99 LSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQTDMN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 180 GCVVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAG 259
Cdd:MTH00207 179 NYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 260 IGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFT 339
Cdd:MTH00207 259 LSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLT 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 340 ITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKHESDVY 419
Cdd:MTH00207 339 TSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKS 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 420 VNVSTSVLAVLAIISGMFLQmFFVSFEISCVMIPESIKYFFMGLVVSGLVIGYMMCQENHLSKSV---SKLQTFFG-SMW 495
Cdd:MTH00207 419 LTTPMLLLTLGAITSGSALN-WWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLlinNPLSHFAScLMW 497
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1790939206 496 FLFYLSAQPLTKFSMVMSSYLLKSVEFGWMEVFGGGGSLKLLSNLSQFNQSIQMKSFNLLVGMMFFTSLTLIVV 569
Cdd:MTH00207 498 FLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
5-571 |
2.14e-171 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 497.74 E-value: 2.14e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 5 MKLSSLSSLFLFLYSISIFPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAG 84
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 85 DKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVL 164
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 165 QGHW----VVVLMWNFAFNGCVVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEF 240
Cdd:MTH00165 161 FGSWnfifYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 241 kNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNS 320
Cdd:MTH00165 241 -FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNM 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 321 LNNQDLRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFS 400
Cdd:MTH00165 320 SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYS 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 401 LWSPYMGVSMHMKHESDVYVNVSTSVLAVLAIISGMFLqMFFVSFEISCVMIPESIKYFFMGLVVSGLVIGYMMCQ---- 476
Cdd:MTH00165 400 MSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSML-SWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLmsls 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 477 ENHLSKSVSKLQTFFGSMWFLFYLSAQPLTKFSMVMSSYLLKSVEFGWMEVFGGGGSLKLLSNLSQFNQSIQMKSFNLLV 556
Cdd:MTH00165 479 YNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYL 558
|
570
....*....|....*
gi 1790939206 557 GMMFFTSLTLIVVSL 571
Cdd:MTH00165 559 LSFLLWMIILLLLFL 573
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
23-569 |
9.92e-158 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 462.58 E-value: 9.92e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 23 FPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSM 102
Cdd:MTH00209 17 FLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 103 NLLIFIPSLPALLLGWDGLGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHW-VVVLMWNFAFNGC 181
Cdd:MTH00209 97 NFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWnIFYLNFNSNLGSV 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 182 VVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIG 261
Cdd:MTH00209 177 ISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMS 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 262 ATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFTIT 341
Cdd:MTH00209 257 ANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSI 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 342 CMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKHESDVYVN 421
Cdd:MTH00209 337 CLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNL 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 422 VSTSVLAVLAIISGMFLQMFFVSFEISCVMiPESIKYFFMGLVVSGLVIGYMMCQENHLSKSVSKLQTFFGSMWFLFYLS 501
Cdd:MTH00209 417 KPMLVLTLGSITGGSVMSWVMVPSVNSVVL-PWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNYFLSQMWFLPDLS 495
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1790939206 502 AQPLTKFSMVMSSYLLKSVEFGWMEVFGGGGSLKLLSNLSQFNQSIQMKSFNLLVGMMFFTSLTLIVV 569
Cdd:MTH00209 496 SQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILF 563
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
20-571 |
4.25e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 338.85 E-value: 4.25e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 20 ISIFPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFV 99
Cdd:MTH00211 41 ISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 100 LSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNSKSLGAGFLT-LLANRVGDVMILISIGLLVLQ-GHWVVVLMWNFA 177
Cdd:MTH00211 121 IFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQaVIYNRIGDIGLLLSMVWLLLNlNSWEISQLFILN 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 178 FNGCV-VMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLL 256
Cdd:MTH00211 201 LDLTLfLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTML 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 257 MAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQM 336
Cdd:MTH00211 281 FGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNL 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 337 PFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKHES 416
Cdd:MTH00211 361 PFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINEN 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 417 DVYVNVSTSVLAVLAIISGMFLQMFFVSFEISCVMIPESIKYFFMGLVVSGLVIGYMMCqeNHLSKSVSKLQTFFGSMWF 496
Cdd:MTH00211 441 YKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLELV--NLTHKQLKTSTLSFSNMLG 518
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1790939206 497 LF-YLSAQPLTKFSMVMSSYL-LKSVEFGWMEVFGGGGSLKLLSNLSQFNQSIQMKSFNLLVGMMFFTSLTLIVVSL 571
Cdd:MTH00211 519 YYpPIIHRLLPKLSLKWGQTLsTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFL 595
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
25-499 |
1.62e-93 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 298.60 E-value: 1.62e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 25 IVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNL 104
Cdd:COG1009 47 LLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLG 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 105 LIFIPSLPALLLGWDGLGIVSFALV-VYYQNSKSLGAGFLTLLANRVGDVMILISIGLL-----------------VLQG 166
Cdd:COG1009 127 LVLSDNLLLLFVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLgaiagtlnfsellaaapTILS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 167 HWVVVLMwnfafngcvVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFY 246
Cdd:COG1009 207 SPLLTLI---------LLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 247 LLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNsLNNQDL 326
Cdd:COG1009 278 VAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA-TGTRDI 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 327 RYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSP-LSFFMILLIFIATGFTLAYSWRLMFFSLWSPY 405
Cdd:COG1009 357 RKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGgLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKP 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 406 MGVSMHMKHESDVYVNVSTSVLAVLAIISGMFLQMFFVSFEISCVMIPESIK----YFFM----GLVVSGLVIGYMMcqe 477
Cdd:COG1009 437 RPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGLLAPAAVLGGELHlahgLLLNalplLLSLLGIALGYLL--- 513
|
490 500
....*....|....*....|..
gi 1790939206 478 nHLSKSVSKLQTFFGSMWFLFY 499
Cdd:COG1009 514 -YLKRPLPALAERLKPLYRLLA 534
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
20-571 |
1.02e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 276.08 E-value: 1.02e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 20 ISIFPIVIYFMMNEK---FILLDWhiVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVL 96
Cdd:MTH00208 68 LSLINLLIWILLGCPninISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 97 LFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQ-----NSKSLGAgfltLLANRVGDVMILISIGLLVLQ-GHWVV 170
Cdd:MTH00208 146 IFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTtrndaNSSALQA----VIYNRIGDIGIILFLSLSLINfNSWNL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 171 --VLMWNFAFNGCVVMMLV---VAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNF 245
Cdd:MTH00208 222 neILSLNNSNSFLINILLFgilLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 246 YLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQD 325
Cdd:MTH00208 302 LCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQD 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 326 LRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPY 405
Cdd:MTH00208 382 LRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNP 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 406 MGVSMHMKHESDVYVNVSTSVLAVLAIISGMFLQMFFvsFEISCVMIPESIKYFFMGLVVSGLVIGYMMCQENHLSKSVS 485
Cdd:MTH00208 462 SFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFV--FNLPPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINS 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 486 KLQTFFGSMWFLFYLSAQPLTKFSMVMSSYL-LKSVEFGWMEVFGGGGSLKLLSNLSQFNQSIQMKSFNLLVGMMFFTSL 564
Cdd:MTH00208 540 NFFSFLSNQWFFVNISHSIIISFSFFTSLFGsTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFL 619
|
....*..
gi 1790939206 565 TLIVVSL 571
Cdd:MTH00208 620 LILTLSL 626
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
20-457 |
1.04e-84 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 275.12 E-value: 1.04e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 20 ISIFPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFV 99
Cdd:MTH00004 46 ISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 100 LSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQ-----NSKSLGAgfltLLANRVGDVMILISIGLLVL-QGHWVVVLM 173
Cdd:MTH00004 126 IAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSgraeaNTAALQA----IIYNRIGDIGLILSMAWLAMtLNTWEIQQL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 174 WNFAFNGCVVMM-LVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISV 252
Cdd:MTH00004 202 FSPTQTPTLPLLgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 253 LTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMI 332
Cdd:MTH00004 282 LTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGL 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 333 SSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHM 412
Cdd:MTH00004 362 QKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTP 441
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1790939206 413 KHESDVYVNVSTSVLAVLAIISGMFLQMFFVSFEISCVMIPESIK 457
Cdd:MTH00004 442 INENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMPTTTK 486
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
33-474 |
9.19e-84 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 273.00 E-value: 9.19e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 33 EKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLP 112
Cdd:TIGR01974 58 EAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 113 ALLLGWDGLGIVSFALV-VYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHWV----VVLMWNFAFNGCVV---M 184
Cdd:TIGR01974 138 QLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLnfqeVFALAPGAFFSALTlicL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 185 MLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHP-FLSEFKNFNFYLLfISVLTLLMAGIGAT 263
Cdd:TIGR01974 218 LLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPlFELSPTALYLVTI-IGAITALFAATVAL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 264 FENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFTITCM 343
Cdd:TIGR01974 297 VQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITF 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 344 NVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKHESDVYVNVS 423
Cdd:TIGR01974 377 LIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLP 456
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1790939206 424 TSVLAVLAIISGMFLQMFFVSFEISCVMIPESIKYFF----------MGLVVSGLVIGYMM 474
Cdd:TIGR01974 457 LIVLAVGSVFAGFFIVPLFEFLKGVLPTSAEPALEHHhvpaleiwspTAVAILGILLAYLL 517
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
37-474 |
1.64e-83 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 272.80 E-value: 1.64e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 37 LLDWhiVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLL 116
Cdd:PRK06590 65 LWTW--ISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFF 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 117 GWDGLGIVSFALV-VYYQNSKSLGAGFLTLLANRVGDVMILISIGLLV-----LQGHWVVVLMWNFAFNGCVVM-----M 185
Cdd:PRK06590 143 GWEGVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaefgsLNYDEVFAAAPQFFGLGWSALtliclL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 186 LVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFlsefknFNF---YLLFISVL---TLLMAG 259
Cdd:PRK06590 223 LFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPL------FELspeALLFVAIVgavTALFAA 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 260 IGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFT 339
Cdd:PRK06590 297 FIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVT 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 340 ITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIfIATGFTLAYSWRLMFFSLWSPYMGVSMHMkHESDVY 419
Cdd:PRK06590 377 YATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAGL-VGAFLTAFYSFRLIFLVFHGKEKEKIHHP-HESPAV 454
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1790939206 420 VNVSTSVLAVLAIISGMFLQMFFVSF---------EISCVMIPESIKYFFMGLVVSGLVIGYMM 474
Cdd:PRK06590 455 MTLPLIVLAVLSVFAGALIVPPFLGVlplttelahGEAEHHLPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
20-496 |
3.49e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 263.31 E-value: 3.49e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 20 ISIFPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFV 99
Cdd:MTH00066 44 ISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 100 LSMNLLIFIPSLPALLLGWDGLGIVSFALV-VYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQ-GHWVVVLMWNFA 177
Cdd:MTH00066 124 IAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNtNSWELQQIFLLN 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 178 FNGCVVMM-LVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLL 256
Cdd:MTH00066 204 DNSTLPLLgLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 257 MAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQM 336
Cdd:MTH00066 284 FTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKAL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 337 PFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKHES 416
Cdd:MTH00066 364 PITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINEN 443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 417 DVYVNVSTSVLAVLAIISGMFL-QMFFVSFEISCVMiPESIKYFFMGLVVSGLVIGYMMCQENHLSKSVSKLQTFFGSMW 495
Cdd:MTH00066 444 NPLIINPIKRLAWGSIIAGLLIiFNILPMKPQILTM-PTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMHSFSNLLA 522
|
.
gi 1790939206 496 F 496
Cdd:MTH00066 523 F 523
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
20-401 |
5.70e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 252.08 E-value: 5.70e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 20 ISIFPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFV 99
Cdd:MTH00108 46 ISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 100 LSMNLLIFIPSLPALLLGWDGLGIVSFALV-VYYQNSKSLGAGFLTLLANRVGDV-MILISIGLLVLQGHWVV--VLMWN 175
Cdd:MTH00108 126 ITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIgFILAMAWFLLNLNSWDLqqIFMLN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 176 FAFNGCVVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTL 255
Cdd:MTH00108 206 PNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITT 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 256 LMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQ 335
Cdd:MTH00108 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKT 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1790939206 336 MPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSL 401
Cdd:MTH00108 366 LPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFAL 431
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
66-520 |
2.16e-68 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 232.27 E-value: 2.16e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 66 VVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALV-VYYQNSKSLGAGFLT 144
Cdd:MTH00020 88 VVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 145 LLANRVGDVMILISIGLL-----VLQGHWVVVLMWNFAFNGC--VVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALV 217
Cdd:MTH00020 168 MLVNRVGDIGLLLAMFLLwdrfgSLDFSSVFNMVVSAPSSDItlICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALI 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 218 HSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLF 297
Cdd:MTH00020 248 HAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLF 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 298 HLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFF 377
Cdd:MTH00020 328 HLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIF 407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 378 MILLIFIATGFTLAYSWRLMFFSLWS---PYMGVSMHMkHESDVYVNVSTSVLAVLAIISGMFLQMFFVSFEISCV-MIP 453
Cdd:MTH00020 408 AYWLGCFSALLTAFYSIRLIYLTFLSntnLKKAVFFHL-HEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQITLPpIVP 486
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1790939206 454 ESIKY--FFMGLVVSGLVIGYMMCqenhLSKSVSKLQTFFGSMWFLFYLSAQpltKFSMVMSSYLLKSV 520
Cdd:MTH00020 487 LSIKLlpVFLSLGGIGLVIILYFY----SSKTFRVPFSFIGRNSYTFLGSAW---QFNYILNYFLIKKI 548
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
20-410 |
1.13e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 230.49 E-value: 1.13e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 20 ISIFPIVIYFMMNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFV 99
Cdd:MTH00137 50 VSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 100 LSMNLLIFIPSLPALLLGWDGLGIVSFALVVYY-----QNSKSLGAgfltLLANRVGDvmilisIGLlVLQGHWVVVLM- 173
Cdd:MTH00137 130 IAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWygradANTAALQA----VIYNRVGD------IGL-ILAMAWMATNLn 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 174 -WN----FA----FNGCVVMM-LVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNF 243
Cdd:MTH00137 199 sWEiqqiFAlskdFDLTLPLLgLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTA 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 244 NFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHnSLNN 323
Cdd:MTH00137 279 LTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIH-SLND 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 324 -QDLRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFslw 402
Cdd:MTH00137 358 eQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFF--- 434
|
....*...
gi 1790939206 403 spymgVSM 410
Cdd:MTH00137 435 -----VSM 437
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
57-564 |
7.94e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 214.87 E-value: 7.94e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 57 DSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNS- 135
Cdd:MTH00210 79 DSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRi 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 136 KSLGAGFLTLLANRVGDV-------MILISIGLLVLQGHWVVVLMWNFAFNGCVV-MMLVVAGMTKSAQIPFSAWLPAAM 207
Cdd:MTH00210 159 KANKAAIKAMLINRVGDIglvlamiMILKEFGTLEFSTISSLLVTNINKESLTIIcLLLFIGAVGKSAQLGLHTWLPDAM 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 208 AAPTPVSALVHSSTLVTAGVYLVIRFHPFlseFKNFNFYLLFISVLTLLMAGIGAT---FENDLKKIIALSTLSQLGVMM 284
Cdd:MTH00210 239 EGPTPVSALIHAATMVTAGVFLIIRSGPL---FEGSPLALTIVTILGALTAFFAATvgvVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 285 LSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDL 364
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 365 ILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFF-------SLWSPYMGVsmhmkHESDVYVNVSTSVLAVLAIISGMF 437
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLtfitntnSKKEVFIGV-----HESSWNITFPLLLLAFGSIFVGYL 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 438 LQMFFVSFEISCVmIPESIKYFFMGLVVSGLVIGYMMCQENHLSKSVSKLQTF--FGSMWFLFYLSAQpltKFSMVMSSY 515
Cdd:MTH00210 471 GKEVVLSNVIPPI-VPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSirLYHVIYTFLNSAW---QFNYVINHF 546
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1790939206 516 LLKSV------------EFGWMEVFGGGGSLKLLSNLSQFNQSIQM-KSFNLLVGMMFFTSL 564
Cdd:MTH00210 547 IVKNIwkfghlityriiDRGLLEIIGPRGISKVLIKLTQKISNLQSgMVFNYALIMIIFTTL 608
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
20-399 |
1.85e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 203.61 E-value: 1.85e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 20 ISIFPIVIYFMMNEKFILL----DWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIV 95
Cdd:MTH00095 3 ILIFLILFFFFFLLLFILFlpfmKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 96 LLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHWVVVLMWn 175
Cdd:MTH00095 83 LIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSF- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 176 faFNGCVVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHpFLSEFKNFNFYLLFISVLTL 255
Cdd:MTH00095 162 --FSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFS-YLILNMNVMKIMLLIGLFTM 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 256 LMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQ 335
Cdd:MTH00095 239 FFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNL 318
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1790939206 336 MPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFF 399
Cdd:MTH00095 319 PMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKS 382
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
49-415 |
6.76e-54 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 194.09 E-value: 6.76e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 49 SMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFAL 128
Cdd:PRK07376 82 HLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 129 VVYYQNSKSLG-AGFLTLLANRVGDVMILISI-GLLVLQGhwvvvlmwNFAFNG-------------------CVVMMLV 187
Cdd:PRK07376 162 VGFWYDRKGAAdAAQKAFVVNRVGDFGLLLGIlGLFWATG--------SFDFDGiadrlselvssgavsgwlaLLLCILV 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 188 VAG-MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFEN 266
Cdd:PRK07376 234 FLGpMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQN 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 267 DLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIH--------NSLNNQDLRYMGMISSQMPF 338
Cdd:PRK07376 314 DIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHgmeevvghDPVLAQDMRLMGGLRKYMPI 393
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1790939206 339 TITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILliFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKHE 415
Cdd:PRK07376 394 TAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFVG--FLTAGMTAFYMFRMYFLTFEGEFRGNDKELQKE 468
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
54-369 |
9.17e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 190.94 E-value: 9.17e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 54 VILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQ 133
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 134 NS-KSLGAGFLTLLANRVGDV-----MILI-----SIGLLVLQGHWVVVLMWNFAFNGC------------VVMMLVVAG 190
Cdd:MTH00032 156 TRiQANKAAIKAIVVNRVGDVgvilgMVLIyktigSLDFLTFNGGSVGSGIMDRGYYGGgayesplapfaiIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 191 MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFlseFKNFNFYLLFISVLTLLMAGIGAT---FEND 267
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPL---FEKAPLTLLIITIFGALTAFFAATvglVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 268 LKKIIALSTLSQLGVMMLSLSLNMV-GLSLFHLYTHALFKALLFLCAGAVIHN-SLNNQDLRYMGMISSQMPFTITCMNV 345
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIEGShNVGLFHLVNHAFFKALLFLSAGSVIHStTVDEQDMRKMGGLIHSIPFTYTMMLI 392
|
330 340
....*....|....*....|....
gi 1790939206 346 ANFSLCGAPFLSGFYSKDLILQIS 369
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILELT 416
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
56-398 |
7.28e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 185.25 E-value: 7.28e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNS 135
Cdd:PRK12650 77 ADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 136 KSLGAgFLTLLANRVGDVMILISIGLLVLQG---HWVVVL---MW--NFAFNGCVVMMLVVAGMTKSAQIPFSAWLPAAM 207
Cdd:PRK12650 157 GEAGS-IRTLILTFFGGLTLLAAVAIAATQTgttSLSGILhsdVWaeKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAM 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 208 AAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSL 287
Cdd:PRK12650 236 AAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATI 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 288 SLNM---VGLSLFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDL 364
Cdd:PRK12650 316 GVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEG 394
|
330 340 350
....*....|....*....|....*....|....*...
gi 1790939206 365 ILQISLMSPLSFFMILLIFIATG----FTLAYSWRLMF 398
Cdd:PRK12650 395 MLTAFLEAPGGNAGVVLLLVGAAlgavFTFAYSARLVL 432
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
56-396 |
4.43e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 167.63 E-value: 4.43e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNS 135
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 136 KSLGAGFLTLLANRVGDVMILISIGLLvlqghWVVVLMWNFA------------FNGCVVMMLVVAGMTKSAQIPFSAWL 203
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLL-----YGATGTLNMAdlaarlaeldpgLLLAAFALLLVGFGIKAALFPLHFWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 204 PAAMA-APTPVSALVhSSTLVTAGVYLVIRFHPFLSEFKNFNFY---LLFISVLTLLMAGIGATFENDLKKIIALSTLSQ 279
Cdd:COG0651 229 PDAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALFLgtlLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 280 LGVMMLSLSL-NMVGLS--LFHLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQMPFTITCMNVANFSLCGAPFL 356
Cdd:COG0651 308 IGYILLGLGLgTPLGLAgaLFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1790939206 357 SGFYSKDLILQiSLMSPLSFFMILLIFIATGFTLAYSWRL 396
Cdd:COG0651 387 SGFVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
38-437 |
7.42e-43 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 163.86 E-value: 7.42e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 38 LDWhivnVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLG 117
Cdd:TIGR00940 59 IDW----VPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 118 WDGLGIVSFALVVYY-QNSKSLGAGFLTLLANRVGDVMILISIGLL-VLQGHWVVVLM-------WNFAFNGCVVMMLVV 188
Cdd:TIGR00940 135 WELTSIVSFLLISYWhHRAHSRYGAQKSLTITVFGGLAMLGGLILLgKITGSFSIDAViasadaiRNSPLFGTAMVLVLL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 189 AGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDL 268
Cdd:TIGR00940 215 GAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 269 KKIIALSTLSQLGVMMLSLSLNMVGL----------------SLFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMI 332
Cdd:TIGR00940 295 KGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHET-GTRDIRKLGGL 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 333 SSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISL---------MSPLSFFMILLIFIATGFTLAYSWRLMFFSLWS 403
Cdd:TIGR00940 374 FHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAItahlvnpfdTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
410 420 430
....*....|....*....|....*....|....*
gi 1790939206 404 PYMGVSMHMK-HESDVYVNVSTSVLAVLAIISGMF 437
Cdd:TIGR00940 454 RPKPEDLPRKpHEPPRWMLASPDILVLLVLVFGLF 488
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-437 |
1.47e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 162.78 E-value: 1.47e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVY-YQN 134
Cdd:PRK12647 62 LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHER 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 135 SKS----------LGAGFLTLLANrvgdvMILI-------SIGLLVLQGHWVVVLMWNFAfngcvVMMLVVAG-MTKSAQ 196
Cdd:PRK12647 142 EAArraalqallvTGGGGLALLAG-----LILLgnvtgtySLSELLASGDVIREHPLYLA-----ILLLVLGGaFTKSAQ 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 197 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALST 276
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 277 LSQLG--VMMLSL--SLNMVGLSLFhLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQMPFTITCMNVANFSLCG 352
Cdd:PRK12647 292 VSALGtlVMLLGLgsELAIKAAVLF-LVAHSLYKGALFMVAGIIDHET-GTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 353 APFLSGFYSKDLILQISL-MSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHmKHESDVYVNVSTSVLAVLA 431
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLeAPLWSLILTVAAVLGNALMVAVAFLVGIKPFLGKLVETPKH-PHEAPVLMWLGPAVLAVLG 448
|
....*.
gi 1790939206 432 IISGMF 437
Cdd:PRK12647 449 LLFGLF 454
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
109-383 |
9.17e-42 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 152.08 E-value: 9.17e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 109 PSLPALLLGWDGLGIVSFALVVYY-QNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHWVV----VLMWNFAFNGCVV 183
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSfdelSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 184 MM----LVVAGMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLVIRFHPFLSEFKNF-NFYLLFISVLTLLM 257
Cdd:pfam00361 82 LLlfllILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 258 AGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMVG---LSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISS 334
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1790939206 335 QMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIF 383
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVV 289
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-437 |
1.87e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 160.36 E-value: 1.87e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLF-------VLSMNLLIfipslpaLLLGWDGLGIVSFAL 128
Cdd:PRK12648 74 LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFmgamlgiVLSGNLIL-------LVVFWELTSLSSFLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 129 VVYYQNSKS-----------LGAGFLTLLAnrvgdvmilisiGLLVLqGHWV------VVLMwnfafNG---------CV 182
Cdd:PRK12648 147 IGYWHHRADarrgarmaltvTGAGGLALLA------------GVLLL-GHIVgsydldVVLA-----AGdlirahplyPP 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 183 VMMLVVAG-MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFnFYLL-FISVLTLLMAGI 260
Cdd:PRK12648 209 ALVLILLGaFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEW-FWIVgGAGLITLLLGAY 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 261 GATFENDLKKIIALSTLSQLGVMMLSLSLNM---VGLSLFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQMP 337
Cdd:PRK12648 288 FALFQHDLKGLLAYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDHET-GTRDMRRLSGLRRLMP 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 338 FTITCMNVANFSLCGAPFLSGFYSKDL----ILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMK 413
Cdd:PRK12648 367 ITATLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFGPPPDDLPKTP 446
|
410 420
....*....|....*....|....
gi 1790939206 414 HESDVYVNVSTSVLAVLAIISGMF 437
Cdd:PRK12648 447 HEPPRWMRAPVELLVLLCLLVGIF 470
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
54-366 |
1.94e-39 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 150.12 E-value: 1.94e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 54 VILDSVSLSFSNVVCLISACVMLFSSSYMA-------GDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSF 126
Cdd:PRK06525 71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 127 ALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHWVVVlmwnFAFNGC-------VVMMLVVAGMTKSAQIPF 199
Cdd:PRK06525 151 ALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFAL----SALSGLhgslkylVFLGILFAAWGKSAQLPF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 200 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYL-LFISVLTLLMAGIGATFENDLKKIIALSTLS 278
Cdd:PRK06525 227 YSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTIT 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 279 QLGVMMLSLSLNMVGL------SLFHLYTHALFKALLFLCAGAvIHNSLNNQDLRYMGMISSQMPFTITCMNVANFSLCG 352
Cdd:PRK06525 307 QLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGA-LSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
330
....*....|....
gi 1790939206 353 APFLSGFYSKDLIL 366
Cdd:PRK06525 386 VPPFNGFFSKFPIF 399
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
56-405 |
4.66e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 152.99 E-value: 4.66e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSYMAGDK-FISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQN 134
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 135 SKS--LGA---------GFLTLLAnrvGDVMILI-----SIGLLVLQGHWVVVLMWnFAFngcVVMMLVVAGMTKSAQIP 198
Cdd:PRK12646 156 NGDsqFGAiqsfmitvfGGLALLV---GFIMLYImtgtnNITEILGQADHIKNHGL-FIP---MIFMFLLGAFTKSAQFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 199 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLS 278
Cdd:PRK12646 229 FHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTIS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 279 QLGVMMlslslNMVGL----------------------SLFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQM 336
Cdd:PRK12646 309 QLGMIM-----AMVGIgggyaqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHEA-GTRDIRILSGMRQLF 382
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1790939206 337 PFTITCMNVANFSLCGAPFLSGFYSKDLIL-------QISLMSPLSFFMILLI-FIATGFTLAYSWRLMFFSLWSPY 405
Cdd:PRK12646 383 PKMNLVMTIAALSMAGVPFLNGFLSKEMFLdaltqtgQLSQFSLISMIIIVFIgVIASIFTFTYALYMVKEVFWGKY 459
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
22-399 |
1.65e-38 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 148.49 E-value: 1.65e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 22 IFPIVIYFM-MNEKFILLDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVL 100
Cdd:MTH00063 8 LLCLLIFFLfLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 101 SMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHWVVVLmwnfafng 180
Cdd:MTH00063 88 VMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLC-------- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 181 CVVMMLVVagMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHpFLSEFKNFNFYLLFISVLTLLMAGI 260
Cdd:MTH00063 160 CLFFFLIV--FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYD-YLLGFSWLSIFFSVLLLLTIFITGV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 261 GATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFTI 340
Cdd:MTH00063 237 SSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNL 316
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1790939206 341 TCMNVANFSLCGAPFLSGFYSKDLILqiSLMSPLSFFMILLIFIATGFTL--AYSWRLMFF 399
Cdd:MTH00063 317 FYLFLLVLGLSGVPFIGVFFSKHFLL--SSFSSVVFNVSLLLVVILCVFLsyLYSFRLCLI 375
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
40-437 |
8.48e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 149.30 E-value: 8.48e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 40 WHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMA-GDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGW 118
Cdd:PRK12644 56 EVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDdDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 119 DGLGIVSFALVVYYQNSK-SLGAGFLTLLANRVGDVMILISIGLL-VLQGHWVVVLMWNFAFNGCVV---MMLVVAG-MT 192
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAaSRRAALQALLVTTAGGLAMLVGIIILgQAAGTYRLSELLADPPTGPAVsvaVVLILVGaLS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 193 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKII 272
Cdd:PRK12644 216 KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLIL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 273 ALSTLSQLGVMMLSLSLN-----MVGLSLfhLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQMPFTITCMNVAN 347
Cdd:PRK12644 296 AYGTVSQLGFLTVLVGIGtrdaaLAGLAM--LLAHALFKAALFLVVGIIDH-STGTRDIRKLSGLGRRQPVLAVVAALAA 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 348 FSLCGAPFLSGFYSKDLILQI----SLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLW----SPYMGVSMHMKHESDVY 419
Cdd:PRK12644 373 ASMAGLPPLLGFVAKEAALEAvlhdGALGPAGPVVLAGIVLGSILTVAYSLRFLWGAFArkpgAFPSVAVTEMHRPSPLF 452
|
410
....*....|....*...
gi 1790939206 420 VnVSTSVLAVLAIISGMF 437
Cdd:PRK12644 453 L-APPAVLAVLGLVLGLL 469
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-397 |
5.33e-37 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 146.51 E-value: 5.33e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 47 SCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSF 126
Cdd:PRK12649 69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 127 ALVVYYQNS-KSLGAGFLTLLANRVGDVMILISIGLL-----------VLQGHWVVVLMWNFAFNGCVVMMLVVAGMTKS 194
Cdd:PRK12649 149 MLIGYWRHRpESVYGATKSLLITAGGGLFMFAGFLLLhvitgtydiatILQDSELIENIKGHPLFLITLILIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 195 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIAL 274
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAY 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 275 STLSQLGVMMLSLSLNM-------VGLSLFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQMPFTITCMNVAN 347
Cdd:PRK12649 309 STISQLAYLMTMYGYTTyhepglgVAAATFHLLNHATFKACLFLVAGIVAHEA-ATRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1790939206 348 FSLCGAPFLSGFYSKDLILQISLM------SPLSFFMILLIFIATGFTLAYSWRLM 397
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYETSVEmgaligGPFTIIIPAVAVLGGVFTFAYSIKLI 443
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
45-437 |
8.77e-37 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 145.84 E-value: 8.77e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 45 VSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDK-FISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGI 123
Cdd:PRK12645 65 IPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSI 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 124 VSFALVVY-YQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQG---------HWVVVLMWNFAFNgcVVMMLVVAG-MT 192
Cdd:PRK12645 145 SSFLLISYwYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTgsfsiremiANADEIQNSPLFI--PAMILILLGaFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 193 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKII 272
Cdd:PRK12645 223 KSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 273 ALSTLSQLGVMMLSLSLNMVGL----------------SLFHLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQM 336
Cdd:PRK12645 303 AFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDH-ETGTRDIRKLGGLMTIM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 337 PFTITCMNVANFSLCGAPFLSGFYSKDLILQISL---------MSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMG 407
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFNGFLSKEMFFESMLnateanlfsLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYKP 461
|
410 420 430
....*....|....*....|....*....|.
gi 1790939206 408 VSMHMK-HESDVYVNVSTSVLAVLAIISGMF 437
Cdd:PRK12645 462 EQLPKKaHEAPIGMLISPIILASLVVVFGLF 492
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
193-398 |
1.69e-35 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 141.95 E-value: 1.69e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 193 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFlseFKNFNFYLLFISVLTLLMAGIGATF---ENDLK 269
Cdd:CHL00025 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL---FIVIPYIMNLISLIGIITALLGATLalaQKDIK 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 270 KIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIH--------NSLNNQDLRYMGMISSQMPFTIT 341
Cdd:CHL00025 317 RGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHsmepivgySPDKSQNMVLMGGLRKYMPITKT 396
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1790939206 342 CMNVANFSLCGAPFLSGFYSKDLILQIS-LMSPlsFFMILLIFIAtGFTLAYSWRLMF 398
Cdd:CHL00025 397 TFLLGTLSLCGIPPLACFWSKDEILNDSwLYSP--IFAIIAWSTA-GLTAFYMFRIYL 451
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
121-442 |
2.95e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 138.47 E-value: 2.95e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 121 LGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHWV--VVLMWNFAFNGCVVM---MLVVAGMTKSA 195
Cdd:PRK08375 138 MSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLnmADLAGALAENPTVVTafgFVLLALALKAA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 196 QIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIR-----FHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKK 270
Cdd:PRK08375 218 VFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftvFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKR 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 271 IIALSTLSQLGVMMLSLSLN---MVGLSLFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQMPFTITCMNVAN 347
Cdd:PRK08375 298 VLAYSTVSQMGYILLGLALLtplALAAGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVAS 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 348 FSLCGAPFLSGFYSKdLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKHESDVYVNVSTSVL 427
Cdd:PRK08375 377 LSLIGVPPTSGFVSK-WYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLAL 455
|
330
....*....|....*
gi 1790939206 428 AVLAIISGMFLQMFF 442
Cdd:PRK08375 456 ALLSLLLGIYAGPLL 470
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
56-373 |
1.12e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 120.76 E-value: 1.12e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSYmaGDKFISRFTWIVL----LFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVY 131
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGY--FREYEGKGPGAMGffynLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 132 YQ-NSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHwvvvlMWNFA---------FNGCVVMMLVVAGM-TKSAQIPFS 200
Cdd:PRK06521 156 NHrEAEIRRAGFLYLLMAHAGALAILLAFGLLARESG-----SYDFAamraahlspFWASLVFLLALFGFgAKAGLVPLH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 201 AWLPAAM-AAPTPVSALVhSSTLVTAGVYLVIRFhpflsefkNFNFY---LLFISVLTLLMAGIGATF-------ENDLK 269
Cdd:PRK06521 231 VWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRV--------VFDLLgapGWWWGVLVLALGAISAVLgvlyalaEHDLK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 270 KIIALSTLSQLGVMMLSLSLNMVGLS--------------LFHLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQ 335
Cdd:PRK06521 302 RLLAYSTIENIGIIFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGAGAVLH-ATGTRDMEKLGGLIRR 380
|
330 340 350
....*....|....*....|....*....|....*...
gi 1790939206 336 MPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSP 373
Cdd:PRK06521 381 MPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSP 418
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-445 |
2.00e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 106.82 E-value: 2.00e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSYMAGD--KFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQ 133
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 134 NSKSLGAG--FLTLLANRvGDVMILISIGLLVLQGHWV-VVLMWNFAFNGCVVMMLV-VAGMTKSAQIPFSAWLPAAMAA 209
Cdd:PRK06589 161 NNISLSGGykYLKILMIS-ALLLFLPAVILIYTKTGNLdFVSGGLFSKNQSIILLLMfIYGIAKTAIFPVHSWLPAAMVA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 210 PTPVSALVHSSTLVTAGVYLVIRFH------PFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVM 283
Cdd:PRK06589 240 HYPVSALLHAVIVVKTGLFCIYKILlyifglSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLA 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 284 MLS---LSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGmISSQMPFTITCMNVANFSLCGAPFLSGFY 360
Cdd:PRK06589 320 LLSafiLTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHG-TSKSFPLISFIISISSLSLIGIPIFSGFI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 361 SKDLILQISLMS--PLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKhESDVYVNVSTSVLAVLAIISGMFL 438
Cdd:PRK06589 399 SKFLILLAASEQnqPWLSIIVMLVVIASSILSALYLLKILSSIYKPSLSENSFIT-KSLPYLMQISVITCCCALTLFYFI 477
|
....*..
gi 1790939206 439 QMFFVSF 445
Cdd:PRK06589 478 QILIREF 484
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
67-320 |
2.39e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 106.71 E-value: 2.39e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 67 VCLISACVMLFSSSYMAGDKFISRF-TWI------VLLFVLSMNLLIFIpslpallLGWDGLGIVSFALVVYYQNSK-SL 138
Cdd:PRK08168 78 VQLLGWVIGRFSHRYLQGEPGQRRYvRALagvlaaVHLLVLSDHLLVLI-------AAWAAISLALHRLLCFYPDRPfAR 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 139 GAGFLTLLANRVGDVMILISIGLLVLQ-GHWVVVLMW-NFAFNGCVV------MMLVVAGMTKSAQIPFSAWLPAAMAAP 210
Cdd:PRK08168 151 LAAHKKFIADRLAELLLLAAAALAYLEvGSLSLSALWaHLAAQGASPslqaaaLLLVLAVILKTAQLPVHGWLIQVMEAP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 211 TPVSALVHSStLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLN 290
Cdd:PRK08168 231 TPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLG 309
|
250 260 270
....*....|....*....|....*....|
gi 1790939206 291 MVGLSLFHLYTHALFKALLFLCAGAVIHNS 320
Cdd:PRK08168 310 LYELALLHLVAHSLYKAHAFLSASEAVRDT 339
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-438 |
3.54e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 106.21 E-value: 3.54e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 55 ILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQN 134
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 135 SK-SLGAGFLTLLANRVGDVMILISIGLL--------------VLQGHWVVVLMWN----FAFNGCVVMMLVVAGMTKSA 195
Cdd:PRK12667 159 RGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtlnmadlsaKIRGLSFPLTGGLagnpPLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 196 QIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLVIRF-------HPFLSEFKN-FNFYLLFISVLTLLMAGIGATFEN 266
Cdd:PRK12667 239 IFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgiSPSLIDFRAaLSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 267 DLKKIIALSTLSQLGVMMLSLSLNMV---GLSLFHLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQMPFTITCM 343
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIH-AAGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 344 NVANFSLCGAPFLSGFYSKDLILQiSLMSPLSFFMILLIFIATGFTLAYSWRLmFFSLWSPYMGVSMHMKHESDVYVNVS 423
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFN-ALLESGFYLPALVLLIASAISLVGYFRA-WYSLFFGKPKSGEEVEHKESPSMSVV 474
|
410
....*....|....*
gi 1790939206 424 TSVLAVLAIISGMFL 438
Cdd:PRK12667 475 ILVLALAVLILGILA 489
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
56-387 |
5.03e-23 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 103.27 E-value: 5.03e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSY---MAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVY- 131
Cdd:PRK08667 75 IDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNd 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 132 YQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQ-GHWVV-VLMWNFAFNGCVVMMLVVAGMTKSAQIPFSAWLPAAM-A 208
Cdd:PRK08667 155 YQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQtGSFELsPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHpA 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 209 APTPVSALVhSSTLVTAGVYLVIRF-HPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMML-- 285
Cdd:PRK08667 235 SPSNVSALM-SGVMLKVAVYGLVRFlMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMgi 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 286 ------------SLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQMPFTITCMNVANFSLCGA 353
Cdd:PRK08667 314 glyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVVH-ATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAAL 392
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1790939206 354 PFLSGFYSKDLILQ-----ISLMSPL---SFFMILLIFIATG 387
Cdd:PRK08667 393 PPFNGFASELLLYEsffqsFSVADPLikiLLFSVLAIFALTS 434
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
121-398 |
6.24e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 101.95 E-value: 6.24e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 121 LGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHwvvvlmwNFAFNGCVV-----MMLVVAGM-TKS 194
Cdd:PRK07234 126 LSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANG-------TFAFSGLATadpeaFALIALGLlVKG 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 195 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLSEFKNFnfyLLFISVLTLLMAGIGATFENDLKKIIAL 274
Cdd:PRK07234 199 GIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAF 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 275 STLSQLGVMMLSLSlnmVGlSLFHLyTHALFKALLFLCAGAvIHNSLNNQDLRYMGMISSQMPFTItcmnvANFSLCGAP 354
Cdd:PRK07234 276 STISQLGFILAAPL---VG-GLYAL-AHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTM-----ASFSIAGFP 344
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1790939206 355 FLSGFYSKDLilqisLMSPLSFFMILLIFIATGFTLAYSWRLMF 398
Cdd:PRK07234 345 LLAGFVSKVL-----TLKNLLPWQAIALNLAAVGTAASFWKFIF 383
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
38-398 |
3.14e-22 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 100.75 E-value: 3.14e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 38 LDWHIVNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLpalLLG 117
Cdd:PRK07390 69 LSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSL---FFS 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 118 WDGLGIVSFA--LVVYYQNSKSL---GA--GFLTllaNRVGDVMILIS-IGLLVLQGHWVVVLMWNFAFNGCV---VMML 186
Cdd:PRK07390 146 YVLLEILTLStyLLVGFWYAQPLvvtAArdAFLT---KRVGDLLLLMGvVALSPLAGTLNFSDLAAWAATANLdplTATL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 187 V----VAG-MTKSAQIPFSAWLPAAMAAPTPVSALvHSSTLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIG 261
Cdd:PRK07390 223 LglalIAGpTGKCAQFPLHLWLDEAMEGPNPASIL-RNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 262 ATFENDLKKIIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQMPFTIT 341
Cdd:PRK07390 302 AIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTT-ITQDLTELGGLWSRMPATTL 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1790939206 342 CMNVANFSLCGAPFLSGFYS-KDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMF 398
Cdd:PRK07390 381 AFLVGSAGLVALLPLGGFWAlLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF 438
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
66-437 |
1.92e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 97.86 E-value: 1.92e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 66 VVCLISACVMLFSSSYMAGDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNS-KSLGAGFLT 144
Cdd:PRK08376 98 IATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTwEAIEAGIKY 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 145 LLANRVGDVMILISIGLLVLQ------GHWVVVLMWNFAFNGCVVMMLVVAGMT-KSAQIPFSAWLPAAM-AAPTPVSAL 216
Cdd:PRK08376 178 MFVGSLASSMVLLGIALLYGQygtlnmAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAYpAAPSSISAM 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 217 VHSSTLvtAGVYLVIR--FHPFLSEF--KNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMV 292
Cdd:PRK08376 258 LLVIKQ--AGLYALARvlFSIYGPAInlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLA 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 293 GLS---------------LFHLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQMPFTITCMNVANFSLCGAPFLS 357
Cdd:PRK08376 336 ALGdpamasygeialaggIYHIVNHALYKALLFLTAGAVIY-ETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFN 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 358 GFYSKDLILQISLMspLSFFMILLIFIATGFTLAYSWRLMFfslwSPYMGVSMH---MKHESDVYVNVSTSVLAVLAIIS 434
Cdd:PRK08376 415 GFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFH----TAFFGPPSEkvmNVKEPPKPMLVPMLILAIAIIGM 488
|
...
gi 1790939206 435 GMF 437
Cdd:PRK08376 489 GLF 491
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
182-395 |
4.03e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 90.83 E-value: 4.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 182 VVMMLVVAGMTKSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYL------VIRFHPFLSEFKN------FNFYLL 248
Cdd:PRK08668 198 VFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGfllvlyVLPGTKLFSEFGTyrgvplFNYILA 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 249 FISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSL-NMVGLS--LFHLYTHALFKALLFLCAGAVIHNSlNNQD 325
Cdd:PRK08668 277 WLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLgTSLGFAggLFHVFNHALFKGLFFLIFAAVIYRT-GTTK 355
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 326 LRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQiSLMSPLSFFMILLIFIATGFTLAYSWR 395
Cdd:PRK08668 356 ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFE-ALISKGMPITAFMAFFGSIGSFLYVFR 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
114-442 |
1.42e-16 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 83.02 E-value: 1.42e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 114 LLLGWDGLGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQ-GHWVVVLMwnFAFNGCVVMMLVVAGMT 192
Cdd:PRK12668 118 LFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAEtGSFAFGAI--AGLGGTAAWLILIGFGV 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 193 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFlsefknfNFYLLFISVLTLLMAGIGATFENDLKKII 272
Cdd:PRK12668 196 NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPG-------TELLIYIGAAMAVYGVFFALLENDLRRLL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 273 ALSTLSQLGVMML------SLSLNMvglSLFHLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQMPFTITCMNVA 346
Cdd:PRK12668 269 SYHIVSQVGYMVAgigigtALAING---AVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALFCLVG 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 347 NFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSpymgvsmhmkHESDVYVN----- 421
Cdd:PRK12668 345 ALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFAFFG----------GDSGLRVKdaprn 414
|
330 340
....*....|....*....|...
gi 1790939206 422 --VSTSVLAVLAIISGMFLQMFF 442
Cdd:PRK12668 415 mlVAMGIAAFLCIAIGVYPQALY 437
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-569 |
4.71e-16 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 76.44 E-value: 4.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 392 YSWRLMFFSLWSPYMGVSMHMKHESDVYVNVSTSVLAVLAIISGMFLQMFFVSFEISCVMiPESIKYFFMGLVVSGLVIG 471
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTM-PLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 472 YMMCQENHLSKSVS---KLQTFFGSMWFLFYLSAQPLTKFSMVMSSYLLKSVEFGWMEVFGGGGSLKLLSNLSQFNQSIQ 548
Cdd:pfam06455 80 LELSNLSNKQLKKSlnfNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|.
gi 1790939206 549 MKSFNLLVGMMFFTSLTLIVV 569
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLL 180
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
198-397 |
8.19e-16 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 80.13 E-value: 8.19e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 198 PFSAWLP-AAMAAPTPVSALvHSSTLVTAGVYLVIRFH-PFLSE-FKNFNFYLLFISVLTLLMAGIGATFENDLKKIIAL 274
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 275 STLSQLGVMMLSL-SLNMVGLS--LFHLYTHALFKALLFLCAGaVIHNSLNNQDLRYMGMISSQMPFTITCMNVANFSLC 351
Cdd:COG1008 306 SSVSHMGFVLLGIfALNPLGLQgaVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1790939206 352 GAPFLSGFYSKDLILQISLMSplSFFMILLIFIATGFTLAYSWRLM 397
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQV--NPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
182-400 |
2.29e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 75.57 E-value: 2.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 182 VVMMLVVAGMTKSAQI-PFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLVIRFHPFLSE---FKNFNFYLLFISVLTLL 256
Cdd:PRK08377 207 VGLALLIFGLAVEAELfPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNangWSSVLKLVIIMATLTVF 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 257 MAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNM---VGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMiS 333
Cdd:PRK08377 286 FAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGL-G 364
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 334 SQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFiATGFTLAYSWRL---MFFS 400
Cdd:PRK08377 365 KRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLG-ASVVEAVYYFRLihtMWFK 433
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
56-317 |
2.86e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 75.46 E-value: 2.86e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 56 LDSVSLSFSNVVCLISACVMLFSSSYMAGD----KFISRFTWIVL---LFVLSMNLLIFIPSLPALLLGWDGL------- 121
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDrsyrKYFALFTFTTGfasLAWLSGDLRLMALCWGATLLGLTLLiglnkgw 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 122 GIVSFALVVyyqNSKSLGAGFLTLLanrvgdvmiLISIGLLVLQGHWVVVL-----------MWNFAfngCVVMMLVVAG 190
Cdd:PRK08601 150 KVAREAAKI---SGMLFLISWLALA---------LAIVWLFIATGEWQLTSvlsnenlaqlgTWEKT---GINLLLILAV 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 191 MTKSAQIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIgATFENDLKK 270
Cdd:PRK08601 215 MIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGI-SLVQVDYKR 292
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1790939206 271 IIALSTLSQLGVMMLSLSLNMVGLSLFHLYTHALFKALLFLCAGAVI 317
Cdd:PRK08601 293 QLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
182-442 |
9.55e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 73.83 E-value: 9.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 182 VVMMLVVAGMTKSAQIPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHP--FLSEFKNFNFYLLFISVLTLLMAG 259
Cdd:PRK12663 209 IALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTllFPQERELLHPLLATMAAITMVIGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 260 IGATFENDLKKIIALSTLSQLGVMMLSLSLNM---VGLSLFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQM 336
Cdd:PRK12663 288 LGALAYKDIRRIAGYQVISSIGFILLGLALGTpagINGAIFYLVHDMVVKTALFLIAGSLVRLT-GYRSLQYLGGLYRKE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 337 PFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSplSFFMILLIFIATGFTLAYSW-RLMFFSLWSPYMG--VSMHMK 413
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLfRIFFLAYWGDKDGeeVNFKPI 444
|
250 260
....*....|....*....|....*....
gi 1790939206 414 HesdVYVNVSTSVLAVLAIISGMFLQMFF 442
Cdd:PRK12663 445 P---LYRKLPLSILAVVVIAMGIAAEPLL 470
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
53-367 |
7.14e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 70.92 E-value: 7.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 53 MVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKfISRFTWIVLLF--VLSMNLLIFIPSLPALLLGWDGLGIVSFALVV 130
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERRG-LLRGEFYALLLfaTLGMMLMASANDLLTLFLGLELLSLSLYVLVA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 131 Y-YQNSKSLGAGFLTLLANRVGDVMILISIGLL--------------VLQGHWVVVLMWNFAfngcvvMMLVVAGMT-KS 194
Cdd:COG1007 144 FrRDDRRSSEAALKYFLLGALSSGFLLYGISLLygatgslnlagiaaALAAGGANSPLLLLG------LVLVLAGLAfKL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 195 AQIPFSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLVIRF--HPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKK 270
Cdd:COG1007 218 SAVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKR 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 271 IIALSTLSQLGVMMLSL-SLNMVGLS--LFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFTITCMNVAN 347
Cdd:COG1007 296 MLAYSSIAHAGYLLLGLaAGTPLGVSaaLFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFL 375
|
330 340
....*....|....*....|
gi 1790939206 348 FSLCGAPFLSGFYSKDLILQ 367
Cdd:COG1007 376 LSLAGIPPTAGFFGKFYVFS 395
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
123-434 |
9.01e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 67.45 E-value: 9.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 123 IVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLL-----VLQGHWVVVLMWNFAFNGCV---VMMLVVAGMTKS 194
Cdd:PRK12662 144 ISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLyaitgTLNMGDMFLIIQDLPTNRAIqigVLFIMVGLFIKA 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 195 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIR-----FHPFLSEFK-NFNFYLLFISVLTLLMAGIGATFENDL 268
Cdd:PRK12662 224 ALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFVFTTlPFNNVFMILAALAIVFGSVLAILSKDI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 269 KKIIALSTLSQLGVMMLSLSLNM---VGLSLFHLYTHALFKALLFLCAGAVIHNsLNNQDLRYMGMISSQMPFTITCMNV 345
Cdd:PRK12662 304 KRIFAYSSISHIGYIILAVSLNTyygLAAAVAYIVNHSIVKSALFMVSGSISYH-FGTTKLEDCLNLWKSMPKITLAFVL 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 346 ANFSLCGAPFLSGFYSKDLILQiSLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVSMHMKHESDVyVNVSTS 425
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAKWYILD-AFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESKANDKAFKT-PNAMVL 460
|
....*....
gi 1790939206 426 VLAVLAIIS 434
Cdd:PRK12662 461 CIWIMAILS 469
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-393 |
1.09e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 67.28 E-value: 1.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 183 VMMLVVAGMtKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLVIR-FHPFLSEFKNFNFYL-LFISVLTLLMAG 259
Cdd:PRK07691 213 ILFLFVFAT-KAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARtFTLFFSHDTSFTHYLiLILALLTIIFGV 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 260 IGATFENDLKKIIALSTLSQLGVMMLSLSLN----MVGlSLFHLYTHALFKALLFLCAGAVIHNSLNNqDLRYMGMISSQ 335
Cdd:PRK07691 291 IGAVAYFDIKKIIIYNIMIAVGVILVGVAMMtesgMIG-AIYYLIHDMIVKAALFLLIGIMIKITGTT-DLKKMGGLIKR 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1790939206 336 MPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSplSFFMILLIFIATGFTLAYS 393
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEA--GFYVSGIIVLLSSLLVLYS 424
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
197-367 |
3.70e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 65.62 E-value: 3.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 197 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLVIRFHPFLSEFKNF-NFYLLFISVLTLLMAGIGATFENDLKKIIAL 274
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWwGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 275 STLSQLGVMMLSLSLNMVGLS--------------LFHLYTHALFKALLFLCAGAVIHNSlNNQDLRYMGMISSQMPFTI 340
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRT-GHRDIEKLGGIGKKMPVIS 354
|
170 180
....*....|....*....|....*..
gi 1790939206 341 TCMNVANFSLCGAPFLSGFYSKDLILQ 367
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
94-367 |
5.22e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 64.96 E-value: 5.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 94 IVLLFVLSMNLLIFIPSLPALL--LGWDGLGIVSFALVVYYQNSKSLGAGFLTLLANRVGDVMILISIGLLVLQGHWVVV 171
Cdd:TIGR01972 109 YALLLLLEAGVIGVFLALDLFLfyVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFD 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 172 L--MWNFAFNGCVVMMLVVAGM----TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLVIRFH--PFLSEFKN 242
Cdd:TIGR01972 189 LleLLNLPLPFGVQTWLFLAFFiafaVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNlpLFPDASLY 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 243 FNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSL-SLNMVGLS--LFHLYTHALFKALLFLCAGaVIHN 319
Cdd:TIGR01972 268 FAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIfSFNELGISgaVFQMISHGLITAALFLLVG-VLYE 346
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1790939206 320 SLNNQDLRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQ 367
Cdd:TIGR01972 347 RAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILL 394
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
193-392 |
5.36e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.69 E-value: 5.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 193 KSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLVIRFHPFLSE---FKNFNFYLLFISVLTLLMAGIGATFENDL 268
Cdd:PRK08676 219 KSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQsgaAEQFSNVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 269 KKIIALSTLSQLGVMMLSLSLNM---VGLSLFHLYTHALFKALLFLCAGaVIHNSLNNQDLRYMGMISSQMPFTITCMNV 345
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTplaLFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1790939206 346 ANFSLCGAPFLSGFYSKDLIL-QISLMSPLSFFMILLIFIATGFTLAY 392
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFILlQLGGISVWLVLAVLLLLLLAASSFAI 424
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
192-388 |
1.76e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.86 E-value: 1.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 192 TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLVIRFHPFLSEFKNFNF---YLLFISVLTLLMAGIGATFEND 267
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFpgrLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 268 LKKIIALSTLSQLGVMMLSLSLN---MVGLSLFHLYTHALFKALLFLCAGAVIHnSLNNQDLRYMGMISSQMPFTITCMN 344
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGgplGIFAALLHMLNHSLTKSAIFFASGNVLQ-KYGTRDINVIRGLLKVSPLTGWGLM 383
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1790939206 345 VANFSLCGAPFLSGFYSKDLILQISLMS-PLSFFMILLIFIATGF 388
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLILTAGLARgPLLIAILLLLLLTLAF 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
197-366 |
2.29e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 56.75 E-value: 2.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 197 IPFSAWLPAAMA-APTPVSALvHSSTLVTAGVYLVIRFH-PFLSE-FKNFNFYLLFISVLTLLMAGIGATFENDLKKIIA 273
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSlPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 274 LSTLSQLGVMMLSL-SLNMVGLS--LFHLYTHALFKALLFLCAGaVIHNSLNNQDLRYMGMISSQMPFTITCMNVANFSL 350
Cdd:PRK05846 307 YSSISHMGFVTLGIfAGNQLGIQgaIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170
....*....|....*.
gi 1790939206 351 CGAPFLSGFYSKDLIL 366
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
213-433 |
3.17e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 56.19 E-value: 3.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 213 VSALVHS-STLVTAGVYLVI-RFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLN 290
Cdd:PRK06277 233 GSALLQTfSKFVLVALMLVIfKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 291 M---VGLSLFHLYTHALFKALLFLCAGaVIHNSLNNQDLRYMGMISSQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQ 367
Cdd:PRK06277 313 TplgIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1790939206 368 ISLMSPLSFFMILLIFIATGftlayswrlMFFSLWSPYMGVSMHMKHESDVYVNVSTSVLAVLAII 433
Cdd:PRK06277 392 AAMQANMPELAIIMIIVSIG---------TFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSLA 448
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
197-392 |
7.05e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 55.09 E-value: 7.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 197 IPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLVIRF--HPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIA 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 274 LSTLSQLGVMML----SLSLNMVGlSLFHLYTHALFKALLFLCAGaVIHNSLNNQDLRYM-GMISSQ--MPFTITCMNVA 346
Cdd:PRK06473 301 YSSIGHMGYILLaaaaATPLSILA-AVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLrGLLNPErgLPITGSLMILG 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1790939206 347 NFSLCGAPFLSGFYSKDLILQISLmsPLSFFMILLIFIATGFTLAY 392
Cdd:PRK06473 379 VMASAGIPGMVGFIAEFLVFRGSF--PIFPVQTLLCMIGTGLTAVY 422
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
53-362 |
1.76e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 50.59 E-value: 1.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 53 MVILDSVSLSFSNVVCLISACVMLFSSSYMAgDKFISRFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYY 132
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 133 QNSK-------------SLGAGFL----TLLANRVGDVMILISIGLLVLQGHWVVVLMWNFAFngcvvmmLVVAGMTKSA 195
Cdd:PRK05777 147 RDRRrsleaaikyfvlgALASGFLlygmSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVF-------LLVGLAFKLS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 196 QIPFSAWLPAAM-AAPTPVSALVHSSTLVTA-GVYLVIRFHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIA 273
Cdd:PRK05777 220 AVPFHMWTPDVYeGAPTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 274 LSTLSQLGVMMLSL-SLNMVGLS--LFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYMGMISSQMPFTITCMNVANFSL 350
Cdd:PRK05777 300 YSSIAHAGYLLVGLaAGTAEGYSavLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSL 379
|
330
....*....|..
gi 1790939206 351 CGAPFLSGFYSK 362
Cdd:PRK05777 380 AGIPPTAGFWGK 391
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
53-390 |
3.97e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 49.56 E-value: 3.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 53 MVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFIS-RFTWIVLLFVLSMNLLIFIPSLPALLLGWDGLGIVSFALVVY 131
Cdd:TIGR01770 65 FFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKfEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 132 YQNSK-SLGAGFLTLLANRVGDVMILISIGLLVLQG---------HWVVVLMWNFAFNGCVVMMLVVAGMTKSAQIPFSA 201
Cdd:TIGR01770 145 KRKSRfSTEAGLKYFILGAFSSGLLLFGISLIYGFTgslnfedllLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 202 WLPAAM-AAPTPVSALVHSSTLVtAGVYLVIR--FHPFLSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLS 278
Cdd:TIGR01770 225 WVPDVYeGAPTPVTAFFSIVPKI-AIFAVFLRlfLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 279 QLGVMMLSLSLNMVGL---SLFHLYTHALFKALLFLCAGAVihNSLNNQDLRY---MGMISSQMPFTITCMNVANFSLCG 352
Cdd:TIGR01770 304 HVGYILIGLLAGTLEGikaVLFYIFIYALMSLGAFGVLSLL--RSYKDEWIEYisdFAGLFKTNPILAILILIFMFSLAG 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1790939206 353 APFLSGFYSKDLILQISLMSP---LSFFMILLIFIATGFTL 390
Cdd:TIGR01770 382 IPPLAGFFGKFYVFFALLKSGlywLAVIAVLTSVIGAFYYL 422
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-386 |
4.10e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 49.05 E-value: 4.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 184 MMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLsefkNFNFyLLFISVLTLLMAGIGAT 263
Cdd:MTH00112 96 TLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSL----NPTL-LLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 264 FENDLKKIIALSTLSQLGVMMLSLSLNmVGLSLFHLYTHALFKALLFLcagavIHNSLNNQDLRYMGMISSQMPFTITCM 343
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1790939206 344 NVANFSLCGAPFLSGFYSKDLILQ-------------ISLMSPLS-FFMILLIFIAT 386
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQeltkqnmtptatiMAMLSLLSlFFYLRLTYIST 301
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
69-316 |
6.48e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.94 E-value: 6.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 69 LISACVMLFSSSYMAGDKFISRFTWIVLLF-VLSMNLLIFIPSLPALLLGWDGLGIVSFALVVYYQNSKSLGAGFLTLla 147
Cdd:PRK06459 51 IISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAFVFMAF-- 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 148 NRVGDVMILISIGLLVLQGHwvvVLMWNFAFNGCVVMMLVVAGMTKSAQIPF--SAWLPAAMA-APTPVSAlVHSSTLVT 224
Cdd:PRK06459 129 GELSTVLILAGFAWAFIISG---TTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFSA-ILSATMTL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 225 AGVYLVIRFHPF--LSEFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSLNMV---------G 293
Cdd:PRK06459 205 MGVYGILKMTILtqTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVtkqlitsieH 284
|
250 260
....*....|....*....|....*..
gi 1790939206 294 LSLFHLYT----HALFKALLFLCAGAV 316
Cdd:PRK06459 285 FSLITVILysfaHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
198-398 |
1.26e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.91 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 198 PFSAWLPAA-MAAPTPVSALVHSSTLVTAGVYLVIRFHPFLS-EFKNFNFYLLFISVLTLLMAGIGATFENDLKKIIALS 275
Cdd:MTH00226 248 PFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 276 TLSQLGVMMLSL-SLNMVGL--SLFHLYTHALFKALLFLCAgAVIHNSLNNQDLRYMGMISSQMPFTITCMNVANFSLCG 352
Cdd:MTH00226 328 SVAHMGLVSITLvTHDIIGLtgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVA 406
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1790939206 353 APFLSGFYSKDLilqiSLMSPLSFFMILLIFIATGFTLAYSWRLMF 398
Cdd:MTH00226 407 VPPSGNFIGEYL----SILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
43-91 |
1.88e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 39.33 E-value: 1.88e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1790939206 43 VNVSSCSMSMMVILDSVSLSFSNVVCLISACVMLFSSSYMAGDKFISRF 91
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
175-392 |
2.90e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.55 E-value: 2.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 175 NFAFNGCVVM--MLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRF--HPFLSEFKNFNFYLLFI 250
Cdd:PRK07363 198 NLSLNTQLILltGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFglQLFPQTWSLVAPGLAII 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 251 SVLTLLMAGIGATFENDLKKIIALSTLSQLGVMML----SLSLNMVGlSLFHLYTHALFKALLFLCAGaVIHNSLNNQDL 326
Cdd:PRK07363 278 GTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVaaaaGTQLSLLG-AVAQMISHGLILALLFHLVG-IVERKVGTRDL 355
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 327 RYMGMISSQ---MPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMS-PLSffmILLIFIATGFTLAY 392
Cdd:PRK07363 356 DVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTfPIP---TLLCIVASGLTAVY 422
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
184-367 |
9.98e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 41.45 E-value: 9.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 184 MMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFHPFLsefkNFNFyLLFISVLTLLMAGIGAT 263
Cdd:MTH00070 96 IMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL----NSNL-LIIMGLLSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 264 FENDLKKIIALSTLSQLGVMMLSLS----LNMVGLSLFHLYTHALFKALLFLcagavihNSLNNQDlryMGMISSQMPFT 339
Cdd:MTH00070 171 NQTQLRKIMAYSSIAHLGWMIIILTfsphLTLLNLLIYLIMTSSMFLMLMNL-------NSTNINK---LSSSWSKNPTL 240
|
170 180
....*....|....*....|....*...
gi 1790939206 340 ITCMNVANFSLCGAPFLSGFYSKDLILQ 367
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
171-383 |
2.01e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 40.64 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 171 VLMWNFAFNGCVVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVirfhPFLSEFKNFNFYLLFI 250
Cdd:MTH00144 75 LIMYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 251 SVLTLLMAGIGATFENDLKKIIALSTLSQLGVMMLSLslnMVGLSLFHLYTHALFKALLFLcagaviHNSLNNQDLRYMG 330
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAI---LHGSWLMWMYFLIYIVSSGFL------FFSLWSGDSGSMK 221
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1790939206 331 MISSQMPFTITCMNVANF--SLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIF 383
Cdd:MTH00144 222 DLGSLKPSYKTGLSIISLllSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLL 276
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
175-437 |
5.56e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 39.33 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 175 NFAFNGCVVMMLVVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSstLVTAGVYLVIrfhpfLSEFKNFNFYLLFISVLT 254
Cdd:PRK12664 139 NGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV-----LLLFFSGEEILLFLGIIT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 255 LLMAGIGATFENDLKKIIALSTLSQLGVMMLSLSL-----NMVGLSLFHLYTHALFKALLFLCAGAVIHNSLNNQDLRYM 329
Cdd:PRK12664 212 AIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFsgssgVAIGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 330 GMIssQMPFTITCMNVANFSLCGAPFLSGFYSKDLILQISLMSPLSFFMILLIFIATGFTLAYSWRLMFFSLWSPYMGVS 409
Cdd:PRK12664 292 GLF--KMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFASVGLKFFWYAFISKSKS 369
|
250 260
....*....|....*....|....*...
gi 1790939206 410 MHMKHESDVYVNVSTSVLAVLAIISGMF 437
Cdd:PRK12664 370 KPEAEKVYIGSKLSMIILVLICVVLGMF 397
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
193-311 |
6.22e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 39.26 E-value: 6.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790939206 193 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLVIRFH----PFLSEFknFNFYLLFISVLTLLMAGIGATFENDL 268
Cdd:MTH00217 219 KIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSwpllPEASEY--FSPLIQTLSLLAIIYGSLTTCRQVDL 296
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1790939206 269 KKIIALSTLSQLGVMMLSL-SLNMVGL--SLFHLYTHALFKALLFL 311
Cdd:MTH00217 297 KRIIAYSSVAHMGLVTLGIfSHTIQGLvaAIFLMLAHGLVSSALFI 342
|
|
| |
