anti-sigma 70 protein [Acinetobacter phage vB_AbaM_Konradin]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| AsiA super family | cl07572 | Anti-Sigma Factor A; Anti-sigma factor A is a transcriptional inhibitor that inhibits sigma ... |
4-77 | 3.55e-13 | ||
Anti-Sigma Factor A; Anti-sigma factor A is a transcriptional inhibitor that inhibits sigma 70-directed transcription by weakening its interaction with the core of the host's RNA polymerase. It is an all-helical protein, composed of six helical segments and intervening loops and turns, as well as a helix-turn-helix DNA binding motif, although neither free anti-sigma factor nor anti-sigma factor bound to sigma-70 has been shown to interact directly with DNA. In solution, the protein forms a symmetric dimer of small (10.59 kDa) protomers, which are composed of helix and coil regions and are devoid of beta-strand/sheet secondary structural elements. The actual alignment was detected with superfamily member pfam09010: Pssm-ID: 401090 Cd Length: 85 Bit Score: 59.26 E-value: 3.55e-13
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| Name | Accession | Description | Interval | E-value | ||
| AsiA | pfam09010 | Anti-Sigma Factor A; Anti-sigma factor A is a transcriptional inhibitor that inhibits sigma ... |
4-77 | 3.55e-13 | ||
Anti-Sigma Factor A; Anti-sigma factor A is a transcriptional inhibitor that inhibits sigma 70-directed transcription by weakening its interaction with the core of the host's RNA polymerase. It is an all-helical protein, composed of six helical segments and intervening loops and turns, as well as a helix-turn-helix DNA binding motif, although neither free anti-sigma factor nor anti-sigma factor bound to sigma-70 has been shown to interact directly with DNA. In solution, the protein forms a symmetric dimer of small (10.59 kDa) protomers, which are composed of helix and coil regions and are devoid of beta-strand/sheet secondary structural elements. Pssm-ID: 401090 Cd Length: 85 Bit Score: 59.26 E-value: 3.55e-13
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| Name | Accession | Description | Interval | E-value | ||
| AsiA | pfam09010 | Anti-Sigma Factor A; Anti-sigma factor A is a transcriptional inhibitor that inhibits sigma ... |
4-77 | 3.55e-13 | ||
Anti-Sigma Factor A; Anti-sigma factor A is a transcriptional inhibitor that inhibits sigma 70-directed transcription by weakening its interaction with the core of the host's RNA polymerase. It is an all-helical protein, composed of six helical segments and intervening loops and turns, as well as a helix-turn-helix DNA binding motif, although neither free anti-sigma factor nor anti-sigma factor bound to sigma-70 has been shown to interact directly with DNA. In solution, the protein forms a symmetric dimer of small (10.59 kDa) protomers, which are composed of helix and coil regions and are devoid of beta-strand/sheet secondary structural elements. Pssm-ID: 401090 Cd Length: 85 Bit Score: 59.26 E-value: 3.55e-13
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