|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 716.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 12 FKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 92 FICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 172 DNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFLSLLEPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 252 GDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQFLFWSMVT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 1778128417 332 IIILLTWIGARPVEDPYILTGQILTVVYFLYYLINP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-365 |
1.21e-124 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 364.50 E-value: 1.21e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 17 NALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFFICLY 96
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 97 LHVGRGMYYGSYNYLH--TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVDNA 174
Cdd:COG1290 105 LHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 175 TLTRFFTFH-FLLPFIVAAAVMIHLLFLHQTGSNNPLG----LNSDMDKVPFHPYFSFKDLFGFILMIASLLFLSLLEPy 249
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 250 lLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQFLFW 327
Cdd:COG1290 264 -INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342
|
330 340 350
....*....|....*....|....*....|....*...
gi 1778128417 328 SMVTIIILLTWIGARPveDPYILTGQILTVVYFLYYLI 365
Cdd:COG1290 343 AFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
3.14e-90 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 270.01 E-value: 3.14e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 10 PLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 90 FFFICLYLHVGRGMYYGSYNYLH--TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1778128417 168 GFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
4.71e-82 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 248.45 E-value: 4.71e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 19 LVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFFICLYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 99 VGRGMYYGSYNYLH--TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1778128417 177 TRFFTFHFLLPFIVAAAVMIHLLFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
237-341 |
8.17e-13 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 65.59 E-value: 8.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 237 IASLLFLSLLEPYLLGDPdnftpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFY-NSNKFRG 315
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQN 122
|
90 100
....*....|....*....|....*...
gi 1778128417 316 MQFYPLNQ--FLFWSMVTIiilltWIGA 341
Cdd:TIGR01156 123 PFRRPVATtvFLFGTVVAL-----WLGI 145
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 716.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 12 FKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 92 FICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 172 DNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFLSLLEPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 252 GDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQFLFWSMVT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 1778128417 332 IIILLTWIGARPVEDPYILTGQILTVVYFLYYLINP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 649.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 1 MNKPIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFL 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 81 RTLHANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTD 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 161 LVQWVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 241 LFLSLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1778128417 321 LNQFLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLINPLILMLWDKLM 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 643.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 5 IRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 85 ANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 165 VWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFLS 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 245 LLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQF 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1778128417 325 LFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLI-NPLILMLWDKLMN 378
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVlMPLAGWLENKALE 378
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 638.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 1 MNKPIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFL 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 81 RTLHANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTD 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 161 LVQWVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 241 LFLSLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1778128417 321 LNQFLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLI-NPLILMLWDKLMN 378
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLIlFPLLGALENKMLN 379
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 634.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 1 MNKPIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFL 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 81 RTLHANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTD 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 161 LVQWVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 241 LFLSLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1778128417 321 LNQFLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYF-LYYLINPLILMLWDKLMN 378
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFlLFIIIIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-376 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 629.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 1 MNKPIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFL 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 81 RTLHANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTD 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 161 LVQWVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 241 LFLSLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1778128417 321 LNQFLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLINPLILMLWDKL 376
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKL 376
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 623.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 5 IRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 85 ANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 165 VWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFLS 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 245 LLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQF 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1778128417 325 LFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLI 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 620.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 4 PIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTL 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 84 HANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 164 WVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFL 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 244 SLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1778128417 324 FLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLI-NPLILMLWDKLM 377
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILIlMPIASLIENNLL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 585.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 4 PIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTL 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 84 HANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 164 WVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFL 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 244 SLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1778128417 324 FLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLI-NPLILMLWDKLMN 378
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFfFPLISYLENKLIF 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 531.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 1 MNKPIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFL 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 81 RTLHANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTD 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 161 LVQWVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 241 LFLSLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1778128417 321 LNQFLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLINPLILMLWDKLMN 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 513.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 4 PIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 84 HANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 164 WVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFL 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 244 SLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1778128417 324 FLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLI-NPLILMLWDKLMN 378
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVlIPLLGELENQLLF 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 510.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 1 MNKPIRTSHPLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFL 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 81 RTLHANGASFFFICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTD 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 161 LVQWVWGGFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 241 LFLSLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1778128417 321 LNQFLFWSMVTIIILLTWIGARPVEDPYILTGQILTVVYFLYYLI-NPLILMLWDKLMN 378
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLIlMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-365 |
4.72e-137 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 395.85 E-value: 4.72e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 17 NALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFFICLY 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 97 LHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVDNATL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 177 TRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFLSlLEPY---LLGD 253
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG-IEPRietLLQD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 254 PDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQFLFWSMVTII 333
Cdd:MTH00033 252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331
|
330 340 350
....*....|....*....|....*....|...
gi 1778128417 334 ILLTWIGARPV-EDPYILTGQILTVVYFLYYLI 365
Cdd:MTH00033 332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
16-365 |
2.59e-129 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 375.05 E-value: 2.59e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 16 NNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFFICL 95
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 96 YLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVDNAT 175
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 176 LTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFlSLLEPYLLGDPD 255
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFIIF-SLFYPFNLGDPE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 256 NFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSnkfRGMQFYPLNQFLFWSMVTIIIL 335
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNN---YTSCLNKLNKFLVFSFIVVNVI 319
|
330 340 350
....*....|....*....|....*....|
gi 1778128417 336 LTWIGARPVEDPYILTGQILTVVYFLYYLI 365
Cdd:MTH00086 320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-365 |
1.21e-124 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 364.50 E-value: 1.21e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 17 NALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFFICLY 96
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 97 LHVGRGMYYGSYNYLH--TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVDNA 174
Cdd:COG1290 105 LHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 175 TLTRFFTFH-FLLPFIVAAAVMIHLLFLHQTGSNNPLG----LNSDMDKVPFHPYFSFKDLFGFILMIASLLFLSLLEPy 249
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 250 lLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQFLFW 327
Cdd:COG1290 264 -INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342
|
330 340 350
....*....|....*....|....*....|....*...
gi 1778128417 328 SMVTIIILLTWIGARPveDPYILTGQILTVVYFLYYLI 365
Cdd:COG1290 343 AFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
3.14e-90 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 270.01 E-value: 3.14e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 10 PLFKIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 90 FFFICLYLHVGRGMYYGSYNYLH--TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1778128417 168 GFSVDNATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
13-365 |
1.39e-86 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 266.08 E-value: 1.39e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 13 KIANNALVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFF 92
Cdd:MTH00046 3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 93 ICLYLHVGRGMYYGSYNYLHTWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVD 172
Cdd:MTH00046 83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 173 NATLTRFFTFHFLLPFIVAAAVMIHLLFLHQTGSNNPLGL-NSDMDKVPFHPYFSFKDLFGFILMIASLLFLSLLEPYLL 251
Cdd:MTH00046 163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 252 GDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIaLVMSIAILMILPFYNSNKFrgmqFYPLNQFLFWSMVT 331
Cdd:MTH00046 243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSV----YSVWRQVNFWLIVS 317
|
330 340 350
....*....|....*....|....*....|....
gi 1778128417 332 IIILLTWIGARPVEDPYILTGQILTVVYFLYYLI 365
Cdd:MTH00046 318 LFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
4.71e-82 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 248.45 E-value: 4.71e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 19 LVDLPAPSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFFICLYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 99 VGRGMYYGSYNYLH--TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1778128417 177 TRFFTFHFLLPFIVAAAVMIHLLFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
3.21e-49 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 162.82 E-value: 3.21e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 208 NPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFLSLLEPYLLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1778128417 288 KLGGVIALVMSIAILMILPFYNSNKFRGmQFYPLNQFLFWSMVTIIILLTWIGARPVEDPYILTGQI 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
4.91e-47 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 157.79 E-value: 4.91e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 89 SFFFICLYLHVGRGMYYGSYNYLH--TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 167 GGFSVDNATLTRFFTFHF-LLPFIVAAAVMIHLLFLHQTGSNNPLGLNSDMDKVPFHPYFSFKDLFGFILMIASLLFLSL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1778128417 246 LEPYLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
2.45e-42 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 143.39 E-value: 2.45e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFYNSNKFRGMQFYPLNQFLFWSMVTIIILLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1778128417 339 IGARPVEDPYILTGQILTVVY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-210 |
5.36e-38 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 135.99 E-value: 5.36e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 34 FGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFFICLYLHVGRGMYYGSYNYLH- 112
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 113 -TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVDNATLTRFFTFH-FLLPFIV 190
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 1778128417 191 AAAVMIHLLFLHQTGSNNPL 210
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
1.00e-34 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 127.14 E-value: 1.00e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 25 PSNISAWWNFGSLLGLCLIIQIATGLFLAMHYTANVDLAFSSVAHICRDVNYGWFLRTLHANGASFFFICLYLHVGRGMY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 105 YGSYNYLH--TWMTGVIILFLVMGTAFMGYVLPWGQMSFWGATVITNLLSAVPYLGTDLVQWVWGGFSVDNATLTRFFTF 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 1778128417 183 H-FLLPFIVAAAVMIHLLFLHQTGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
237-340 |
1.82e-14 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 70.42 E-value: 1.82e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 237 IASLLFLSLLEPYLLGDPdnftpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFY-NSNKFRG 315
Cdd:CHL00058 48 IACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQN 122
|
90 100
....*....|....*....|....*..
gi 1778128417 316 MQFYP--LNQFLFWSMVTIiilltWIG 340
Cdd:CHL00058 123 PFRRPvaTTVFLIGTAVAL-----WLG 144
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
230-350 |
6.34e-14 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 69.05 E-value: 6.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 230 LFGFILM--IASLLFLSLLEPYLLGDPdnftpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPF 307
Cdd:COG5679 40 IFPVVILgtIALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPF 114
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1778128417 308 Y-NSNKFRGMQFYPLNQFLFwSMVTIIILLTWIGAR-PVEDPYIL 350
Cdd:COG5679 115 IeNVNKFQNPFRRPVATAVF-LFGTLVTLWLGIGAAlPIDKSLTL 158
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
237-341 |
8.17e-13 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 65.59 E-value: 8.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1778128417 237 IASLLFLSLLEPYLLGDPdnftpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAILMILPFY-NSNKFRG 315
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQN 122
|
90 100
....*....|....*....|....*...
gi 1778128417 316 MQFYPLNQ--FLFWSMVTIiilltWIGA 341
Cdd:TIGR01156 123 PFRRPVATtvFLFGTVVAL-----WLGI 145
|
|
|