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Conserved domains on  [gi|1776515602|ref|XP_031410598|]
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LON peptidase N-terminal domain and RING finger protein 3, partial [Meleagris gallopavo]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Spy super family cl27809
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 1-134 6.20e-07

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG3914:

Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 50.38  E-value: 6.20e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1776515602   1 APNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREFLFCLALDMGNktakSEAQ 80
Cdd:COG3914   108 NPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDN----AEAL 183

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1776515602  81 KLL-LSLFSLipGN---AQEHLPDILQLLSHHSRLKGNLLSSVGSGGTSHALQRLLKV 134
Cdd:COG3914   184 NNLgNALQDL--GRleeAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYDRFEEL 239
 
Name Accession Description Interval E-value
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 1-134 6.20e-07

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 50.38  E-value: 6.20e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1776515602   1 APNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREFLFCLALDMGNktakSEAQ 80
Cdd:COG3914   108 NPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDN----AEAL 183

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1776515602  81 KLL-LSLFSLipGN---AQEHLPDILQLLSHHSRLKGNLLSSVGSGGTSHALQRLLKV 134
Cdd:COG3914   184 NNLgNALQDL--GRleeAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYDRFEEL 239
PLN03088 PLN03088
SGT1, suppressor of G2 allele of SKP1; Provisional
 2-58 1.82e-04

SGT1, suppressor of G2 allele of SKP1; Provisional


Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 42.47  E-value: 1.82e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1776515602   2 PNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEA 58
Cdd:PLN03088   33 PNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKLEEYQTA 89
3a0801s09 TIGR00990
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
 4-83 1.87e-03

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 39.58  E-value: 1.87e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1776515602   4 DHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREF-LFCLALDMGNKTAKSEAQKL 82
Cdd:TIGR00990 159 DPVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRANAYDGLGKYADALLDLtASCIIDGFRNEQSAQAVERL 238


                  .
gi 1776515602  83 L 83
Cdd:TIGR00990 239 L 239
 
Name Accession Description Interval E-value
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 1-134 6.20e-07

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 50.38  E-value: 6.20e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1776515602   1 APNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREFLFCLALDMGNktakSEAQ 80
Cdd:COG3914   108 NPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDN----AEAL 183

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1776515602  81 KLL-LSLFSLipGN---AQEHLPDILQLLSHHSRLKGNLLSSVGSGGTSHALQRLLKV 134
Cdd:COG3914   184 NNLgNALQDL--GRleeAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYDRFEEL 239
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
2-75 4.90e-05

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 43.84  E-value: 4.90e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1776515602   2 PNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREFLFCLALDMGNKTA 75
Cdd:COG0457     5 PDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEA 78
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
2-116 5.58e-05

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 43.46  E-value: 5.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1776515602   2 PNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREFLFCLALDMGNKTAKSEAQK 81
Cdd:COG0457    73 PDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGI 152

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1776515602  82 LLLSLfslipGNAQEHLPDILQLLSHHSRLKGNLL 116
Cdd:COG0457   153 ALEKL-----GRYEEALELLEKLEAAALAALLAAA 182
PLN03088 PLN03088
SGT1, suppressor of G2 allele of SKP1; Provisional
 2-58 1.82e-04

SGT1, suppressor of G2 allele of SKP1; Provisional


Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 42.47  E-value: 1.82e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1776515602   2 PNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEA 58
Cdd:PLN03088   33 PNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKLEEYQTA 89
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
2-75 2.03e-04

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 41.92  E-value: 2.03e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1776515602   2 PNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREFLFCLALDMGNKTA 75
Cdd:COG0457    39 PDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEA 112
3a0801s09 TIGR00990
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
 4-83 1.87e-03

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 39.58  E-value: 1.87e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1776515602   4 DHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREF-LFCLALDMGNKTAKSEAQKL 82
Cdd:TIGR00990 159 DPVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRANAYDGLGKYADALLDLtASCIIDGFRNEQSAQAVERL 238


                  .
gi 1776515602  83 L 83
Cdd:TIGR00990 239 L 239
TadD COG5010
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ...
 1-69 1.90e-03

Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444034 [Multi-domain]  Cd Length: 155  Bit Score: 38.02  E-value: 1.90e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1776515602   1 APNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREFLFCLALD 69
Cdd:COG5010    84 DPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTS 152
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
 1-72 2.30e-03

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 37.48  E-value: 2.30e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1776515602   1 APNDHLLYSNRSQINSTLKACEDALHDAETACRLQPYWLKGHLRKGQALANLGKTEEALREFLFCLALDMGN 72
Cdd:COG4783    68 DPDEPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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