|
Name |
Accession |
Description |
Interval |
E-value |
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
1-1031 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 1148.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 1 MFSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMD 80
Cdd:COG0841 2 NLSRFFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYIT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 81 STSSSSGTMSLtVYFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSSDgsMSAVDVYNYIT 160
Cdd:COG0841 82 STSSEGSSSIT-VEFELGTDIDEALVDVQNAVDRARSDLPEDVEPPGVTKVNPSDFPVMVLALSSDD--LDELELSDYAE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 161 LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIGEEPVTqkspyvYSITMQG 240
Cdd:COG0841 159 RNIKDRLERVPGVGQVQIFGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDRE------YTVRTNG 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 241 RLQNPSEFENIILRTNnDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFP 320
Cdd:COG0841 233 RLKTPEEFENIVIRTN-DGSVVRLGDVARVEDGAEDYRSIARLNGKPAVGLAIQKQPGANALEVADAVRAKLEELQASLP 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 321 EGLEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFAL 400
Cdd:COG0841 312 EGVELTIVYDQSEFIRASIEEVVKTLLEAILLVVLVVFLFLRSWRATLIPAVAIPVSLIGTFAVMYLLGFSLNILTLFAL 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 401 ILAIGIVVDDAIIVVENIDRILHENEqiSVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAIS 480
Cdd:COG0841 392 VLAIGIVVDDAIVVVENIERHMEEGL--SPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQLFRQFALTVAIA 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 481 VTISGFVALTLTPSLCALFLRRN-ESKPFYIVQKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKAVPN 559
Cdd:COG0841 470 LLISLFVALTLTPALCARLLKPHpKGKKGRFFRAFNRGFDRLTRGYGRLLRWALRHRKLTLLVALALLALSVLLFGRLPT 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 560 SLVPEEDQGLMIGIINLPSASALHRTISEVDHINQEVLKTNGVKDAMAMIGFDLFTSSlkENAAAMFIGLKDWKDRNVSA 639
Cdd:COG0841 550 EFFPEEDQGQIIVSVQLPPGTSLERTEAVVRQVEEILLEVPEVESVFSVVGFSGGGSG--SNSGTIFVTLKPWDERDRSA 627
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 640 DEIAMELNKKFAFDRNAsSIFIGLPPIPGLSITGGFEMYVQnksGKSYDQIQEDVNKLVAAANQREELYGVRTTLDTSFP 719
Cdd:COG0841 628 DEIIARLREKLAKIPGA-RVFVFQPPAGGLGSGAPIEVQLQ---GDDLEELAAAAEKLLAALRQIPGLVDVRSDLQLGKP 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 720 QYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNIFVRSNDGKMIPLDSFL 799
Cdd:COG0841 704 ELQLDIDREKAAALGVTVADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENLYVRTPDGEMVPLSSVA 783
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 800 TLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAI-AQVAKETLGDDYSIAWSGSAYQEVSSKGTASYAFALGMIF 878
Cdd:COG0841 784 TIEEGTGPSSINRYNGQRSVTVSANLAPGVSLGEALAAIeELAAELKLPPGVSIEFTGQAEEEQESFSSLGLAFLLALLL 863
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 879 VFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERfKKGKGVFEA 958
Cdd:COG0841 864 VYLVLAAQFESFIQPLIILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFANQLR-EEGMSLREA 942
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1757279886 959 AVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEWL 1031
Cdd:COG0841 943 ILEAARLRLRPILMTSLATILGLLPLALGTGAGAEFRQPLGIAVIGGLLFSTLLTLFVVPVLYVLLDRLRRRL 1015
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
2-1027 |
0e+00 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 1062.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 2 FSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMDS 81
Cdd:TIGR00915 1 MAKFFIDRPIFAWVIAIIIMLAGTLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 82 TSSSSGTMSLTVYFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSSDGSMSAVDVYNYITL 161
Cdd:TIGR00915 81 SSDSDGSMTITLTFEQGTDPDIAQVQVQNKLQLATPLLPQEVQRQGVRVEKASSNFLMVIGLVSDDGSMTKEDLSDYAAS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 162 NVLDELKRVPGVGDANAIGNRnYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIGEEPVTQKSPYVYSITMQGR 241
Cdd:TIGR00915 161 NMVDPLSRLEGVGDVQLFGSQ-YAMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGQLGGLPAVPGQQLNATIIAQTR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 242 LQNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFPE 321
Cdd:TIGR00915 240 LQTPEQFENILLKVNTDGSQVRLKDVARVELGGENYSISARFNGKPASGLAIKLATGANALDTAKAVKAELAVLEPFFPQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 322 GLEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALI 401
Cdd:TIGR00915 320 GMKYVYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFAMV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 402 LAIGIVVDDAIIVVENIDRILHEnEQISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISV 481
Cdd:TIGR00915 400 LAIGLLVDDAIVVVENVERVMAE-EGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAM 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 482 TISGFVALTLTPSLCALFLRRNE--SKPFYIVQKFNDF---FDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKA 556
Cdd:TIGR00915 479 ALSVLVALILTPALCATMLKPIEkgEHHEKKGGFFGWFnrmFDSSTHGYENGVGKILRRRGRYLLVYVLLVGGMVFLFVR 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 557 VPNSLVPEEDQGLMIGIINLPSASALHRTISEVDHINQEVLKTNG--VKDAMAMIGFDLFTSSlkENAAAMFIGLKDWKD 634
Cdd:TIGR00915 559 LPTSFLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLAKEKanVESVFTVNGFSFAGRG--QNMGMAFIRLKDWEE 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 635 R---NVSADEIAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNKSGKSYDQIQEDVNKLVAAANQREELYGVR 711
Cdd:TIGR00915 637 RtgkENSVFAIAGRATGHFMQIKDAMVIAFVPPAILELGNATGFDFFLQDRAGLGHEALLQARNQLLGLAAQNPALTRVR 716
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 712 TTLDTSFPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNIFVRSNDGK 791
Cdd:TIGR00915 717 PNGLEDEPQLKIDIDREKAQALGVSIADINTTLSTAWGSSYVNDFIDRGRVKRVYVQAEEDARMSPEDINKWYVRNASGE 796
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 792 MIPLDSFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKEtLGDDYSIAWSGSAYQEVSSKGTASYA 871
Cdd:TIGR00915 797 MVPFSAFATVRWEYGSPQLERYNGLPSMEILGSAAPGVSTGQAMAAMEAIAQK-LPPGFGFSWTGMSYEERLSGSQAPAL 875
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 872 FALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAmEERFKK 951
Cdd:TIGR00915 876 YALSLLVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFA-KELMAQ 954
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1757279886 952 GKGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENF 1027
Cdd:TIGR00915 955 GKSIVEAALEAARLRLRPILMTSLAFILGVVPLAISTGAGSGSQHAIGTGVFGGMVTATVLAIFFVPLFYVVVRRL 1030
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
2-1025 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 994.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 2 FSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMdS 81
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYM-S 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 82 TSSSSGTMSLTVYFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSSDGSMSAVDVYNYITL 161
Cdd:pfam00873 80 SQSSYGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGVQRPGISVIKTSLGPIMVLAVTSPDGSYTQTDLRDYADT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 162 NVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIgeepvtQKSPYVYSITMQGR 241
Cdd:pfam00873 160 NIKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQL------EGQGLQALIRAQGQ 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 242 LQNPSEFENIILRtNNDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFPE 321
Cdd:pfam00873 234 LQSAEDFEKIIVK-NQDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQ 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 322 GLEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALI 401
Cdd:pfam00873 313 GVEIVVVYDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLV 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 402 LAIGIVVDDAIIVVENIDRILHENeQISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISV 481
Cdd:pfam00873 393 LAIGLVVDDAIVVVENIERVLEEN-GLKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAI 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 482 TISGFVALTLTPSLCALFLR-RNESKPFYIVQKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKAVPNS 560
Cdd:pfam00873 472 LLSVLVALTLTPALCATLLKpRREPKHGGFFRWFNRMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWLFVRIPTE 551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 561 LVPEEDQGLMIGIINLPSASALHRTISEVDHINQEVLKTNGVKDAMAMIGFDLFTSSLKENAAAMFIGLKDWKDRNV--- 637
Cdd:pfam00873 552 FLPEEDEGVFVTSAQLPPGVSLDQTQRVMKQVEKILKEKPEVESVFAVTGFAFSGDNNGPNSGDAFISLKPWKERPGpek 631
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 638 SADEIAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNK-SGKSYDQIQEDVNKLVAAANQREELYGVRTTLDT 716
Cdd:pfam00873 632 SVQALIERLRKALKQIPGANVFLFQPIQLRGLGTISGFRSDLQVKiFGDDLDALDEARNQILAALAQLPGLSDVRSDGQE 711
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 717 SFPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNIFVRSNDGKMIPLD 796
Cdd:pfam00873 712 DQPQLQVNIDREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYVRNPYGKMIPLS 791
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 797 SFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKE-TLGDDYSIAWSGSAYQEVSSKGTASYAFALG 875
Cdd:pfam00873 792 AFAKIEWGYGPPSINRYNGFRSIVISGNVAAGDSLGDAMEAMAQIAKQvKLPPGYGYTWTGQFEQEQLAGNSLPILIALA 871
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 876 MIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGV 955
Cdd:pfam00873 872 LLVVFLVLAALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELREQEGKSL 951
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 956 FEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLE 1025
Cdd:pfam00873 952 EEAILEACRLRLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVFYVLFH 1021
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
3-1024 |
0e+00 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 903.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 3 SKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMDST 82
Cdd:PRK10555 2 ANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 83 SSSSGTMSLTVYFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSSDGSMSAVDVYNYITLN 162
Cdd:PRK10555 82 SSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 163 VLDELKRVPGVGDANAIGNRnYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIGEEPVTQKSPYVYSITMQGRL 242
Cdd:PRK10555 162 IQDPLSRVNGVGDIDAYGSQ-YSMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 243 QNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFPEG 322
Cdd:PRK10555 241 QTPEQFRDITLRVNQDGSEVTLGDVATVELGAEKYDYLSRFNGKPASGLGVKLASGANEMATAKLVLNRLDELAQYFPHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 323 LEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALIL 402
Cdd:PRK10555 321 LEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINTLTMFAMVL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 403 AIGIVVDDAIIVVENIDRILHEnEQISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISVT 482
Cdd:PRK10555 401 AIGLLVDDAIVVVENVERIMSE-EGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVSAMV 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 483 ISGFVALTLTPSLCALFLR------RNESKPFYivQKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKA 556
Cdd:PRK10555 480 LSVLVAMILTPALCATLLKplkkgeHHGQKGFF--GWFNRMFNRNAERYEKGVAKILHRSLRWILIYVLLLGGMVFLFLR 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 557 VPNSLVPEEDQGLMIGIINLPSASALHRTISEVDHINQEVL--KTNGVKDAMAMIGFDlfTSSLKENAAAMFIGLKDWKD 634
Cdd:PRK10555 558 LPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFthEKDNVMSVFATVGSG--PGGNGQNVARMFIRLKDWDE 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 635 RNV---SADEIAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNKSGKSYDQIQEDVNKLVAAANQREELYGVR 711
Cdd:PRK10555 636 RDSktgTSFAIIERATKAFNKIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAKNPELTRVR 715
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 712 -TTLDTSfPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNIFVRSNDG 790
Cdd:PRK10555 716 hNGLDDS-PQLQIDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDG 794
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 791 KMIPLDSFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKEtLGDDYSIAWSGSAYQEVSSKGTASY 870
Cdd:PRK10555 795 GMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQ-LPNGFGLEWTAMSYQERLSGAQAPA 873
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 871 AFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERfK 950
Cdd:PRK10555 874 LYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMN-Q 952
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1757279886 951 KGKGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLL 1024
Cdd:PRK10555 953 KGHDLFEATLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATILAIFFVPLFFVLV 1026
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
3-1024 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 866.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 3 SKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMdST 82
Cdd:PRK09577 2 ARFFIDRPVFAWVISLFIMLGGIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYT-SA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 83 SSSSGTMSLTVYFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSSDGSMSAVDVYNYITLN 162
Cdd:PRK09577 81 TSSAGQASLSLTFKQGVNADLAAVEVQNRLKTVEARLPEPVRRDGIQVEKAADNIQLIVSLTSDDGRLTGVELGEYASAN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 163 VLDELKRVPGVGDANAIGNRnYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIGEEPVTQKSPYVYSITMQGRL 242
Cdd:PRK09577 161 VLQALRRVEGVGKVQFWGAE-YAMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIGRSAVPDSAPIAATVFADAPL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 243 QNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFPEG 322
Cdd:PRK09577 240 KTPEDFGAIALRARADGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDELSRYFPPG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 323 LEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALIL 402
Cdd:PRK09577 320 VKYQIPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINVLTMFGMVL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 403 AIGIVVDDAIIVVENIDRILHEnEQISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISVT 482
Cdd:PRK09577 400 AIGILVDDAIVVVENVERLMVE-EGLSPYDATVKAMKQISGAIVGITVVLTSVFVPMAFFGGAVGNIYRQFALSLAVSIG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 483 ISGFVALTLTPSLCALFLR-----RNESKPFYivQKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKAV 557
Cdd:PRK09577 479 FSAFLALSLTPALCATLLKpvdgdHHEKRGFF--GWFNRFVARSTQRYATRVGAILKRPLRWLVVYGALTAAAALLFTRL 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 558 PNSLVPEEDQGLMIGIINLPSASALHRTISEVDHINQEVLKTNGVKDAMAMIGFDLFTSSlkENAAAMFIGLKDWKDRNV 637
Cdd:PRK09577 557 PTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEPVAYTFALGGFNLYGEG--PNGGMIFVTLKDWKERKA 634
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 638 SADE---IAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNKSGKSYDQIQEDVNKLVAAANQREELYGVRTTL 714
Cdd:PRK09577 635 ARDHvqaIVARINERFAGTPNTTVFAMNSPALPDLGSTSGFDFRLQDRGGLGYAAFVAAREQLLAEGAKDPALTDLMFAG 714
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 715 DTSFPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFsMLGKNF-QVNIRAKGDFRNTQDTLKNIFVRSNDGKMI 793
Cdd:PRK09577 715 TQDAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDF-MHGSQVrRVIVQADGRHRLDPDDVKKLRVRNAQGEMV 793
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 794 PLDSFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKeTLGDDYSIAWSGSAYQEVSSKGTASYAFA 873
Cdd:PRK09577 794 PLAAFATLHWTLGPPQLTRYNGYPSFTINGSAAPGHSSGEAMAAIERIAA-TLPAGIGYAWSGQSFEERLSGAQAPMLFA 872
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 874 LGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAmEERFKKGK 953
Cdd:PRK09577 873 LSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLSAKNAILIVEVA-KDLVAQRM 951
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1757279886 954 GVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLL 1024
Cdd:PRK09577 952 SLADAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVITATVLAVFLVPLFFVVV 1022
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
3-1021 |
0e+00 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 860.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 3 SKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMDST 82
Cdd:PRK15127 2 PNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 83 SSSSGTMSLTVYFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSSDGSMSAVDVYNYITLN 162
Cdd:PRK15127 82 SDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAAN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 163 VLDELKRVPGVGDANAIGNRnYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIGEEPVTQKSPYVYSITMQGRL 242
Cdd:PRK15127 162 MKDPISRTSGVGDVQLFGSQ-YAMRIWMNPNELNKFQLTPVDVINAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 243 QNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFPEG 322
Cdd:PRK15127 241 TSTEEFGKILLKVNQDGSRVRLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 323 LEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALIL 402
Cdd:PRK15127 321 LKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 403 AIGIVVDDAIIVVENIDRILHEnEQISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISVT 482
Cdd:PRK15127 401 AIGLLVDDAIVVVENVERVMAE-EGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMA 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 483 ISGFVALTLTPSLCALFLRR-------NESKPFYivQKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNK 555
Cdd:PRK15127 480 LSVLVALILTPALCATMLKPiakgdhgEGKKGFF--GWFNRMFEKSTHHYTDSVGNILRSTGRYLVLYLIIVVGMAYLFV 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 556 AVPNSLVPEEDQGLMIGIINLPSASALHRTISEVDHINQEVL--KTNGVKDAMAMIGFDLftSSLKENAAAMFIGLKDWK 633
Cdd:PRK15127 558 RLPSSFLPDEDQGVFLTMVQLPAGATQERTQKVLNEVTDYYLtkEKNNVESVFAVNGFGF--AGRGQNTGIAFVSLKDWA 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 634 DRNVSADE---IAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNKSGKSYDQIQEDVNKLVAAANQREE-LYG 709
Cdd:PRK15127 636 DRPGEENKveaITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLGEAAKHPDmLVG 715
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 710 VRTTLDTSFPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNIFVRSND 789
Cdd:PRK15127 716 VRPNGLEDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAAD 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 790 GKMIPLDSFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKEtLGDDYSIAWSGSAYQEVSSKGTAS 869
Cdd:PRK15127 796 GQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEELASK-LPTGVGYDWTGMSYQERLSGNQAP 874
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 870 YAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERF 949
Cdd:PRK15127 875 ALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMD 954
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1757279886 950 KKGKGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFF 1021
Cdd:PRK15127 955 KEGKGLIEATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFF 1026
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
3-1025 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 776.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 3 SKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMdST 82
Cdd:NF033617 1 SDVFIKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEM-TS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 83 SSSSGTMSLTVYFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVTvRKTSSATLAAISMYSSDGSMSAVDVYNYITLN 162
Cdd:NF033617 80 QSSLGYSTITLQFRLGTDLDVALSEVQAAINAAQSLLPSEAPDPPVY-RKANSADTPIMYIGLTSEEMPRGQLTDYAERV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 163 VLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIGEEPVtqkspyVYSITMQGRL 242
Cdd:NF033617 159 LAPKLSQINGVGSVDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSV------VSTVRANDQL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 243 QNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFPEG 322
Cdd:NF033617 233 KTAEDYEDLVIKYADNGAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPKN 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 323 LEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALIL 402
Cdd:NF033617 313 IKVNVLYDRTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMALVL 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 403 AIGIVVDDAIIVVENIDRILHENEqiSVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISVT 482
Cdd:NF033617 393 AIGLVVDDAIVVVENIHRHIEEGE--SPLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVI 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 483 ISGFVALTLTPSLCALFLRRNEsKPFYIVQKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKAVPNSLV 562
Cdd:NF033617 471 ISGIVALTLTPMMCSRLLKANE-KPGRFARAVDRFFDGLTARYGRGLKWVLKHRPLTLVVALATLALLPLLYVFIPKELA 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 563 PEEDQGLMIGIINLPSASALHRTISEVDHINQEVLKTNGVKDAMAMIGFDLFTSSlkeNAAAMFIGLKDWKDRNVSADEI 642
Cdd:NF033617 550 PSEDRGVIFGMIQAPQSISLDYMSAKMRDVEKILSSDPEVQSLTSFNGVGGNPGD---NTGFGIINLKPWDERDVSAQEI 626
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 643 AMELNKKFAfDRNASSIFI-GLPPIPGLSiTGGFEMYVQNKSGKSYDQIQEDVNKLVAAANQREELYGVRTTLDTSFPQY 721
Cdd:NF033617 627 IDRLRPKLA-KVPGMDLFLfPLQDLPGGA-GSSLPQYQVTLTPSDYDSLFTWAEKLKEKLRKSPQFADVDSDLQDKGPEL 704
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 722 KLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNIFVRSNDGKMIPLDSFLTL 801
Cdd:NF033617 705 NVDIDRDKAARLGISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIYVRSNDGKLVPLSTLAKI 784
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 802 QRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKETLGDDYSIAWSGSAYQEVSSKGTASYAFALGMIFVFL 881
Cdd:NF033617 785 EERAAPLSLNHFNQFNSATLSFNLAPGVSLGEAIEALDQAAKELLPSGISGSFQGAARAFQEEGSSLLFLFLLALAAIYL 864
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 882 ILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGVFEAAVA 961
Cdd:NF033617 865 VLAIQYESFVDPLTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANELQRHQGLSRREAIYQ 944
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1757279886 962 AAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLE 1025
Cdd:NF033617 945 AAALRLRPILMTTLAMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGTLFTLFVLPVVYLLLA 1008
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
2-1024 |
6.63e-176 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 540.96 E-value: 6.63e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 2 FSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMdS 81
Cdd:PRK09579 3 FTDPFIRRPVLASVVSLLIVLLGFQAWSKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYM-T 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 82 TSSSSGTMSLTVYFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSsdGSMSAVDVYNYITL 161
Cdd:PRK09579 82 SVSRQNFSIISIYARIGADSDRLFTELLAKANEVKNQLPQDAEDPVLSKEAADASALMYISFYS--EEMSNPQITDYLSR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 162 NVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIGEEPVtqkspyVYSITMQGR 241
Cdd:PRK09579 160 VIQPKLATLPGMAEAEILGNQVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKGEYV------VTSINASTE 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 242 LQNPSEFENIILRTNNDgSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFPE 321
Cdd:PRK09579 234 LKSAEAFAAIPVKTSGD-SRVLLGDVARVEMGAENYDSISSFDGIPSVYIGIKATPSANPLDVIKEVRAIMPELESQLPP 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 322 GLEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALI 401
Cdd:PRK09579 313 NLKVSIAYDATLFIQASIDEVVKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAMV 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 402 LAIGIVVDDAIIVVENIDRilHENEQISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISV 481
Cdd:PRK09579 393 LAIGLVVDDAIVVVENIHR--HIEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAV 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 482 TISGFVALTLTPSLCALFLRRNESkPFYIVQKFNDFFDWSTSIFSAGVAYMLKrTIRFVLIFC-IMLGAIFYLNKAVPNS 560
Cdd:PRK09579 471 IISGIVALTLSPMMCALLLRHEEN-PSGLAHRLDRLFERLKQRYQRALHGTLN-TRPVVLVFAvIVLALIPVLLKFTQSE 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 561 LVPEEDQGLMIGIINLPSASALHRTISEVDHInQEVLKTngvkdamamigFDLFTSSLKEN---AAAMFIG---LKDWKD 634
Cdd:PRK09579 549 LAPEEDQGIIFMMSSSPQPANLDYLNAYTDEF-TPIFKS-----------FPEYYSSFQINgfnGVQSGIGgflLKPWNE 616
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 635 RNVSADEIAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEmYVQNKSGkSYDQIQEDVNKLVAAANQREELYGVRTTL 714
Cdd:PRK09579 617 RERTQMELLPLVQAKLEEIPGLQIFGFNLPSLPGTGEGLPFQ-FVINTAN-DYESLLQVAQRVKQRAQESGKFAFLDIDL 694
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 715 DTSFPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNIFVRSNDGKMIP 794
Cdd:PRK09579 695 AFDKPEVVVDIDRAKAAQMGVSMQDLGGTLATLLGEGEINRFTIDGRSYKVIAQVERPYRDNPGWLNNYYVKNEQGQLLP 774
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 795 LDSFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYtsGQAIEAIAQVAKETLGDDYSIAWSGSAYQEVSSKGTASYAFAL 874
Cdd:PRK09579 775 LSTLITLSDRARPRQLNQFQQLNSAIISGFPIVSM--GEAIETVQQIAREEAPEGFAFDYAGASRQYVQEGSALWVTFGL 852
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 875 GMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKG 954
Cdd:PRK09579 853 ALAIIFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRHEQGLS 932
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 955 VFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLL 1024
Cdd:PRK09579 933 RREAIEEAAAIRLRPVLMTTAAMVFGMVPLILATGAGAVSRFDIGLVIATGMSIGTLFTLFVLPCIYTLL 1002
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
1-1027 |
4.20e-137 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 439.08 E-value: 4.20e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 1 MFSK---FFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNM- 76
Cdd:COG3696 1 MLNRiirFSLRNRLLVLLLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 77 ------------IYmdstssssgtmsltVYFDIGTDPDQATIDVNNRISAATAKMPDavkklGVTvrktssATLAAIS-- 142
Cdd:COG3696 81 evrsisrfglsvVT--------------VIFEDGTDIYWARQLVLERLQQVREQLPA-----GVT------PELGPIStg 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 143 -----MY---SSDGSMSAVDVYnyiTLnvLD-----ELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAV 209
Cdd:COG3696 136 lgeiyQYtleSDPGKYSLMELR---TL--QDwvirpQLRSVPGVAEVNSFGGFVKQYQVLVDPAKLRAYGLTLDDVIEAL 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 210 NDQNAQyATGKigeepVTQKSPYVYSITMQGRLQNPSEFENIILRTNNdGSFLRLKDVADVEIGSQQYSSQGRLNGN-DA 288
Cdd:COG3696 211 ERNNAN-VGGG-----YIERGGQEYLVRGIGLIRSLEDIENIVVKTRN-GTPVLLRDVAEVRIGPAPRRGAATLNGEgEV 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 289 VPIMINLQSGANALNTAKLVEAKMQELSKSFPEGLEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATL 368
Cdd:COG3696 284 VGGIVLMLKGENALEVIEAVKAKLAELKPSLPEGVKIVPFYDRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGNLRAAL 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 369 IPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENIDRILHENE----QISVKDAAIQAMQEVSSP 444
Cdd:COG3696 364 IVALAIPLSLLFAFIVMRLFGISANLMSLGGLAIDFGIIVDGAVVMVENILRRLEENRaagtPRERLEVVLEAAREVRRP 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 445 VISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNeskpfyIVQKFNDFFDWSTSI 524
Cdd:COG3696 444 IFFATLIIILVFLPIFTLEGVEGKLFRPMALTVIFALLGALLLSLTLVPVLASLLLRGK------VPEKENPLVRWLKRL 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 525 FSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKAVPNSLVPEEDQG-LMIGIINLPSASalhrtISEVDHINQEV---LKTN 600
Cdd:COG3696 518 YRPLLRWALRHPKLVLAVALVLLVLALALFPRLGSEFLPELDEGdLLVMATLPPGIS-----LEESVELGQQVeriLKSF 592
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 601 -GVKDAMAMIGfdlfTSSLKE-----NAAAMFIGLK---DWKDRnVSADEIAMELNKKFAfdrnassifiglpPIPGLSI 671
Cdd:COG3696 593 pEVESVVSRTG----RAEDATdpmgvNMSETFVILKprsEWRSG-RTKEELIAEMREALE-------------QIPGVNF 654
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 672 tgGFEMYVQNK----------------SGKSYDQIQEDVNKLVAAANQREELYGVRTTLDTSFPQYKLIIDRDKLKHFNL 735
Cdd:COG3696 655 --NFSQPIQMRvdellsgvradvavkiFGDDLDVLRRLAEQIEAVLKTVPGAADVQVERVTGLPQLDIRIDRDAAARYGL 732
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 736 NMQDVFSTMNA-----TIGTYYVNDfsmlgKNFQVNIRAKGDFRNTQDTLKNIFVRSNDGKMIPLDSFLTLQRSSGP--- 807
Cdd:COG3696 733 NVADVQDVVETaiggkAVGQVYEGE-----RRFDIVVRLPEELRDDPEAIRNLPIPTPSGAQVPLSQVADIEVVEGPnqi 807
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 808 --DDVKRFnLFPAAQVQGQPAPGYTSgqaiEAIAQVAKE-TLGDDYSIAWSGSAYQEVSSKGTASYAFALGMIFVFLILA 884
Cdd:COG3696 808 srENGRRR-IVVQANVRGRDLGSFVA----EAQAKVAEQvKLPPGYYIEWGGQFENLQRATARLAIVVPLALLLIFLLLY 882
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 885 AQYERWLIPLAVVTAVPFAVFGSFLLVYLRGftndIYFQT----GLLLLIGLSAKNAILIVEFaMEERFKKGKGVFEAAV 960
Cdd:COG3696 883 LAFGSVRDALLILLNVPFALIGGVLALWLRG----MPLSVsagvGFIALFGVAVLNGVVLVSY-INQLRAEGLDLREAII 957
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1757279886 961 AAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENF 1027
Cdd:COG3696 958 EGALERLRPVLMTALVAALGLLPMALSTGPGSEVQRPLATVVIGGLITSTLLTLLVLPALYLLFGRR 1024
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
2-1021 |
6.82e-136 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 435.70 E-value: 6.82e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 2 FSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDA---INGADNMIY 78
Cdd:PRK10614 3 FFALFIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSlgrIAGVNEMTS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 79 MDSTSSSSGTMSltvyFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGvTVRKT--SSATLAAISMYSSDGSMSavDVY 156
Cdd:PRK10614 83 SSSLGSTRIILQ----FDFDRDINGAARDVQAAINAAQSLLPSGMPSRP-TYRKAnpSDAPIMILTLTSDTYSQG--QLY 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 157 NYITLNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIgeEPVTQKspyvYSI 236
Cdd:PRK10614 156 DFASTQLAQTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAV--EDGTHR----WQI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 237 TMQGRLQNPSEFENIILRTNNdGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELS 316
Cdd:PRK10614 230 QTNDELKTAAEYQPLIIHYNN-GAAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDRIRAKLPELR 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 317 KSFPEGLEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLT 396
Cdd:PRK10614 309 ETIPAAIDLQIAQDRSPTIRASLEEVEQTLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLS 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 397 LFALILAIGIVVDDAIIVVENIDRilHENEQISVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALT 476
Cdd:PRK10614 389 LMALTIATGFVVDDAIVVLENISR--HLEAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVT 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 477 LAISVTISGFVALTLTPSLCALFLRRNESKPFYIVQKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKA 556
Cdd:PRK10614 467 LSVAIGISLLVSLTLTPMMCAWLLKSSKPREQKRLRGFGRMLVALQQGYGRSLKWVLNHTRWVGVVLLGTIALNVWLYIS 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 557 VPNSLVPEEDQGLMIGIINLPSASALHRTISEVDHINQEVLKTNGVKDAMAmigfdlFTSSLKENAAAMFIGLKDWKDRN 636
Cdd:PRK10614 547 IPKTFFPEQDTGRLMGFIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTG------FTGGSRVNSGMMFITLKPLSERS 620
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 637 VSADEIAMELNKKFAFDRNASsifIGLPPIPGLSITGGfemyvQNKSGKSYDQIQEDVN-------KLVAAANQREELYG 709
Cdd:PRK10614 621 ETAQQVIDRLRVKLAKEPGAN---LFLMAVQDIRVGGR-----QSNASYQYTLLSDDLAalrewepKIRKALAALPELAD 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 710 VRTTLDTSFPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAkgDFRNTQD--TLKNIFVRS 787
Cdd:PRK10614 693 VNSDQQDKGAEMALTYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPLNQYKVVMEV--DPRYTQDisALEKMFVIN 770
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 788 NDGKMIPLDSFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKEtLGDDYSI--AWSGSAYQEVSSK 865
Cdd:PRK10614 771 NEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIERAMTQ-LGVPSTVrgSFAGTAQVFQETM 849
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 866 GTASYAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAM 945
Cdd:PRK10614 850 NSQLILILAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFAL 929
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1757279886 946 EERFKKGKGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVP---LFF 1021
Cdd:PRK10614 930 EAQRNGNLTAQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGAELRQPLGITIVGGLVMSQLLTLYTTPvvyLFF 1008
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
3-1040 |
1.26e-123 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 403.34 E-value: 1.26e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 3 SKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAINGADNMIYMDST 82
Cdd:PRK10503 13 SRLFILRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 83 SSSSGTMSLTVyFDIGTDPDQATIDVNNRISAATAKMPDAVKKLGVtVRKTSSATLAAISMYSSDGSMSAVDVYNYITLN 162
Cdd:PRK10503 93 SSGGASVITLQ-FQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPV-YSKVNPADPPIMTLAVTSTAMPMTQVEDMVETR 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 163 VLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIG--EEPVTqkspyvysITMQG 240
Cdd:PRK10503 171 VAQKISQVSGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDgpTRAVT--------LSAND 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 241 RLQNPSEFENIILRTNNdGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSFP 320
Cdd:PRK10503 243 QMQSAEEYRQLIIAYQN-GAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESLP 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 321 EGLEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFAL 400
Cdd:PRK10503 322 KSVKVTVLSDRTTNIRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMAL 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 401 ILAIGIVVDDAIIVVENIDRILHENEQisVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQRQFALTLAIS 480
Cdd:PRK10503 402 TIATGFVVDDAIVVIENISRYIEKGEK--PLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVA 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 481 VTISGFVALTLTPSLCALFLrRNESkpfyiVQKFNDFFDWSTSIFS---AGVAYMLKRTIRF------VLIFCIMLGAIF 551
Cdd:PRK10503 480 ILISAVVSLTLTPMMCARML-SQES-----LRKQNRFSRASERMFDrviAAYGRGLAKVLNHpwltlsVALSTLLLTVLL 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 552 YLnkAVPNSLVPEEDQGLMIGIINLPSASALHRTISEVDHINQEVLKTNGVKDAMAMIGFDLFTSSLkeNAAAMFIGLKD 631
Cdd:PRK10503 554 WI--FIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSL--NSARLQINLKP 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 632 WKDRNVSADEIAMELNKKFAfdrNASSIFIGLPPIPGLSI--TGGFEMYVQNKSGKSYDQIQEDVNKLVAAANQREELYG 709
Cdd:PRK10503 630 LDERDDRVQKVIARLQTAVA---KVPGVDLYLQPTQDLTIdtQVSRTQYQFTLQATSLDALSTWVPKLMEKLQQLPQLSD 706
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 710 VRTTLDTSFPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNIFVRSND 789
Cdd:PRK10503 707 VSSDWQDKGLVAYVNVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSD 786
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 790 GKMIPLDSFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKE-TLGDDYSIAWSGSAYQEVSSKGTA 868
Cdd:PRK10503 787 GGVVPLSSIATIEQRFGPLSINHLDQFPSTTISFNVPDGYSLGDAVQAIMDTEKTlNLPADITTQFQGSTLAFQSALGST 866
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 869 SYAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEER 948
Cdd:PRK10503 867 VWLIVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAE 946
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 949 FKKGKGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFN 1028
Cdd:PRK10503 947 REQGMSPRDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGICMVGGLIVSQVLTLFTTPVIYLLFDRLA 1026
|
1050
....*....|..
gi 1757279886 1029 EWLDKKRGKVHE 1040
Cdd:PRK10503 1027 LYTKSRFPRHEE 1038
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
17-1038 |
2.02e-102 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 345.98 E-value: 2.02e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 17 AIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIASTVASPIEDAI---NGADNMIYMDSTSSSSGTmsltV 93
Cdd:TIGR00914 20 TLVMAILGIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMaglPGLETTRSLSRYGLSQVT----V 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 94 YFDIGTDPDQATIDVNNRISAATAKMPDAVK-KLGvtvrkTSSATLAAISMYS----SDGSMSAVDVYNYITLNVLD--- 165
Cdd:TIGR00914 96 IFKDGTDLYFARQLVNERLQQARDNLPEGVSpEMG-----PISTGLGEIFLYTveaeEGARKKDGGAYTLTDLRTIQdwi 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 166 ---ELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKI---GEEpvtqkspyvYSITMQ 239
Cdd:TIGR00914 171 irpQLRTVPGVAEVNSIGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIerrGEQ---------YLVRAP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 240 GRLQNPSEFENIILRTNnDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKSF 319
Cdd:TIGR00914 242 GQVQSMDDIRNIVIATG-EGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVAQAVGDKLETINKTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 320 PEGLEYKIPYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFA 399
Cdd:TIGR00914 321 PEGVEIVTTYDRSQLVDAAIATVKKNLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLGA 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 400 liLAIGIVVDDAIIVVENIDRIL-----HENEQISVKD---AAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFVGEIQR 471
Cdd:TIGR00914 401 --LDFGLIVDGAVVIVENAHRRLaeaqhHHGRQLTLKErlhEVFAASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFH 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 472 QFALTLAISVTISGFVALTLTPSLCALFLRRNeskpfyIVQKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIF 551
Cdd:TIGR00914 479 PMAFTVVLALAGAMILSLTFVPAAVALFIRGK------VAEKENRLMRVLKRRYEPLLERVLAWPAVVLGAAAVSIVLVV 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 552 YLNKAVPNSLVPEEDQG-LMIGIINLPSASaLHRTISEVDHINQEVLKTNGVKDAMAMIG-FDLFTSSLKENAAAMFIGL 629
Cdd:TIGR00914 553 WIASRVGGEFIPSLNEGdLAYQALRIPGTS-LAQSVAMQQTLEKLIKSFPEVARVFAKTGtAEIATDPMPPNASDTYIIL 631
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 630 K---DWKDRNVSADEIAMELNKKFAfdRNASSIFIGLPPIPGL--SITGGFEMYVQNK-SGKSYDQIQEDVNKLVAAANQ 703
Cdd:TIGR00914 632 KpesQWPEGKKTKEDLIEEIQEATV--RIPGNNYEFTQPIQMRfnELISGVRSDVAVKvFGDDLDDLDATAEKISAVLKG 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 704 REELYGVRTTLDTSFPQYKLIIDRDKLKHFNLNMQDVFSTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDTLKNI 783
Cdd:TIGR00914 710 VPGAADVKVEQTTGLPYLTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQL 789
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 784 FV---RSNDGK--MIPLDSFLTLQRSSGPDDVKRFNLFPA----AQVQGQPAPGYTSgQAIEAIAQVAKETLGddYSIAW 854
Cdd:TIGR00914 790 PIplpLSEDARkqFIPLSDVADLRVSPGPNQISRENGKRRvvvsANVRGRDLGSFVD-DAKKAIAEQVKLPPG--YWITW 866
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 855 SGSAYQEVSSKGTASYAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSA 934
Cdd:TIGR00914 867 GGQFEQLQSATKRLQIVVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAV 946
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 935 KNAILIVEFaMEERFKKGKGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAI 1014
Cdd:TIGR00914 947 LNGLVMISF-IRKLLEEGPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATLLTL 1025
|
1050 1060
....*....|....*....|....
gi 1757279886 1015 FFVPLFFYLLenfneWLDKKRGKV 1038
Cdd:TIGR00914 1026 FVLPALYRLV-----HRRRHKGRK 1044
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
291-1027 |
2.13e-24 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 109.95 E-value: 2.13e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 291 IMINLQSGANALNTAKLVEAKMQELSKSFPEGLEYKI---PYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRAT 367
Cdd:COG1033 166 VTLDPDPLSSDLDRKEVVAEIRAIIAKYEDPGVEVYLtgfPVLRGDIAEAIQSDLAIFFPLALLLILLLLFLFFRSLRGV 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 368 LIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENIDRILHENEqiSVKDAAIQAMQEVSSPVis 447
Cdd:COG1033 246 LLPLLVVLLAVIWTLGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREERRKGL--DKREALREALRKLGPPV-- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 448 ivlVLCAVFVPVSFISGFVGEIQ--RQFALTLAISVTISGFVALTLTPSLCALFLRRNESKPFYIVQKFNDffdwstSIF 525
Cdd:COG1033 322 ---LLTSLTTAIGFLSLLFSDIPpiRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPKPKTRRLKKPPELG------RLL 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 526 SAGVAYMLKRTIRFVLIFCIMLGAIFYlnkavpnslvpeedqglmiGIINLPsasalhrtisevdhinqevlktngvkda 605
Cdd:COG1033 393 AKLARFVLRRPKVILVVALVLAVVSLY-------------------GISRLK---------------------------- 425
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 606 mamIGFDlFTSSLKENAAAmfiglkdwkdrNVSADEIamelNKKFAfdrNASSIFIGLPPIPGLSItggfemyvqnksgK 685
Cdd:COG1033 426 ---VEYD-FEDYLPEDSPI-----------RQDLDFI----EENFG---GSDPLEVVVDTGEPDGL-------------K 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 686 SYDQIQEdVNKLVAAANQREELYGVRTTLDTsfpqykliidrdklkhfnlnMQDVFSTMNATIGTYYVndfsmLGKNFQV 765
Cdd:COG1033 471 DPEVLKE-IDRLQDYLESLPEVGKVLSLADL--------------------VKELNQALNEGDPKYYA-----LPESREL 524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 766 NIRAKGDFRNTQDTLKNIFVrSNDGKMIPLDSFLTLQRSsgpDDVKRFnlfpaaqvqgqpapgytsgqaIEAIAQVAKET 845
Cdd:COG1033 525 LAQLLLLLSSPPGDDLSRFV-DEDYSAARVTVRLKDLDS---EEIKAL---------------------VEEVRAFLAEN 579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 846 LG-DDYSIAWSGSAY------QEVSSKGTASYAFALGMIFVFLILAaqYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTN 918
Cdd:COG1033 580 FPpDGVEVTLTGSAVlfaainESVIESQIRSLLLALLLIFLLLLLA--FRSLRLGLISLIPNLLPILLTFGLMGLLGIPL 657
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 919 DIYFQTGLLLLIGLSAKNAILIVEfAMEERFKKGKGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSAsrhSL 998
Cdd:COG1033 658 NIATAVVASIALGIGVDYTIHFLS-RYREERRKGGDLEEAIRRALRTTGKAILFTSLTLAAGFGVLLFSSFPPLA---DF 733
|
730 740
....*....|....*....|....*....
gi 1757279886 999 GTGLIGGMIAASTLAIFFVPLFFYLLENF 1027
Cdd:COG1033 734 GLLLALGLLVALLAALLLLPALLLLLDPR 762
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
285-506 |
1.24e-18 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 91.46 E-value: 1.24e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 285 GNDAVPIMINLQSgANALNTAKLVEAKMQELSKSFP-EGLEYKIP------YDTTKFVIESIkevIKTFVEALILVIIVM 357
Cdd:COG1033 547 DYSAARVTVRLKD-LDSEEIKALVEEVRAFLAENFPpDGVEVTLTgsavlfAAINESVIESQ---IRSLLLALLLIFLLL 622
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 358 YMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVEnidRILHE-NEQISVKDAAIQ 436
Cdd:COG1033 623 LLAFRSLRLGLISLIPNLLPILLTFGLMGLLGIPLNIATAVVASIALGIGVDYTIHFLS---RYREErRKGGDLEEAIRR 699
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 437 AMQEVSSPVISIVLVLCAVFVPVSFiSGFVgeIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNESK 506
Cdd:COG1033 700 ALRTTGKAILFTSLTLAAGFGVLLF-SSFP--PLADFGLLLALGLLVALLAALLLLPALLLLLDPRIAKK 766
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
349-507 |
2.37e-11 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 66.16 E-value: 2.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 349 ALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVL----GFSINLLTL-FALILAIGIVVDDAIIVVENIDRILH 423
Cdd:pfam03176 151 TLVVIFIILLIVYRSVVAALLPLLTVGLSLGAAQGLVAILahilGIGLSTFALnLLVVLLIAVGTDYALFLVSRYREELR 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 424 ENEQisVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFIS-GFVGeiqrQFALTLAISVTISGFVALTLTPSLCALFLRR 502
Cdd:pfam03176 231 AGED--REEAVIRAVRGTGKVVTAAGLTVAIAMLALSFARlPVFA----QVGPTIAIGVLVDVLAALTLLPALLALLGRW 304
|
....*
gi 1757279886 503 NESKP 507
Cdd:pfam03176 305 GLWPP 309
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
337-551 |
2.33e-10 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 64.87 E-value: 2.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 337 ESIKEVIKTFVEALILVIIvmYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVE 416
Cdd:PRK13024 263 DAIDAGIIAGIIGFALIFL--FMLVYYGLPGLIANIALLLYIFLTLGALSSLGAVLTLPGIAGLVLGIGMAVDANVLIFE 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 417 NIdrilheNEQISVKDAAIQAMQEVSSPVIS------IVLVLCAVfvpVSFISGfVGEIqRQFALTLAISVTISGFVALT 490
Cdd:PRK13024 341 RI------KEELRKGKSLKKAFKKGFKNAFStildsnITTLIAAA---ILFFFG-TGPV-KGFATTLIIGILASLFTAVF 409
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1757279886 491 LTPSLCALFLRRNESKPFYIVQKFNDFFD-WSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIF 551
Cdd:PRK13024 410 LTRLLLELLVKRGDKKPFLFGVKKKKIHNiNEGVTIFDRIDFVKKRKWFLIFSIVLVIAGII 471
|
|
| actII |
TIGR00833 |
Transport protein; The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family ... |
282-507 |
6.31e-10 |
|
Transport protein; The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family (TC 2.A.6.5)Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. This sub-family includes the S. coelicolor ActII3 protein, which may play a role in drug resistance, and the M. tuberculosis MmpL7 protein, which catalyzes export of an outer membrane lipid, phthiocerol dimycocerosate. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 129913 [Multi-domain] Cd Length: 910 Bit Score: 63.45 E-value: 6.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 282 RLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSK-SFPEGLEYKI--PYDTTKFVIESI-KEVIKTFVEALILVIIVM 357
Cdd:TIGR00833 111 RSDDGKATIIIVNLAGEKGQKEAQEAINAVRRIVEQtNAPDGLTVHVtgPLATIADILESGdKDMNRITATTGIIVLIIL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 358 YMFLKNFRATLIPMIAVP---------VSLLGTFAGLYVLGFSINLLTlfALILAIGIvvDDAIIVVENI--DRILHENE 426
Cdd:TIGR00833 191 LLVYRSPITMLVPLVSVGfsvvvaqgiVSLLGIPGLIGVNAQTTVLLT--ALVIGAGT--DYAVFLTGRYheERRKGESL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 427 QISVKDAAIQAMQE-VSSPVISIVLVLCAVFVPVSFISGFvgeiqrqfALTLAISVTISGFVALTLTPSLCALFLRRNES 505
Cdd:TIGR00833 267 EEAAAEALRGTGKAiLGSALTVAVAFLALSLARLPSFKTL--------GVSCAVGVLVALLNAVTLTPALLTLEGREGLM 338
|
..
gi 1757279886 506 KP 507
Cdd:TIGR00833 339 KP 340
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
349-502 |
6.34e-10 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 63.25 E-value: 6.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 349 ALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLG-------FSINLLTLfaLILAIGIvvDDAIIVV----EN 417
Cdd:COG2409 178 TLPVALVVLLLVFRSLVAALLPLLTAGLAVGVALGLLALLAaftdvssFAPNLLTM--LGLGVGI--DYALFLVsryrEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 418 idriLHENEqiSVKDAAIQAMQEVSSPVIS-----IVLVLCAVFVPVSFIsgfvgeiqRQFALTLAISVTISGFVALTLT 492
Cdd:COG2409 254 ----LRAGE--DREEAVARAVATAGRAVLFsgltvAIALLGLLLAGLPFL--------RSMGPAAAIGVAVAVLAALTLL 319
|
170
....*....|
gi 1757279886 493 PSLCALFLRR 502
Cdd:COG2409 320 PALLALLGRR 329
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
873-1035 |
5.02e-09 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 60.24 E-value: 5.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 873 ALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILiVEFAMEERFKKG 952
Cdd:TIGR00921 200 AISGILVVLVLLLDFKRWWRPLLPLVIILFGVAWVLGIMGWLGIPLYATTLLAVPMLIGVGIDYGIQ-TLNRYEEERDIG 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 953 KGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMiFATGAGSASRhsLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEWLD 1032
Cdd:TIGR00921 279 RAKGEAIVTAVRRTGRAVLIALLTTSAGFAAL-ALSEFPMVSE--FGLGLVAGLITAYLLTLLVLPALLQSIDIGREKVK 355
|
...
gi 1757279886 1033 KKR 1035
Cdd:TIGR00921 356 KEI 358
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
291-627 |
2.05e-07 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 55.23 E-value: 2.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 291 IMINLQSGANALNTAKLVEAKMQELSKS-FPEGLEYKI---PYDTTKFVIESIKEVIKTFVEALILVIIVMYMFLKNFRA 366
Cdd:TIGR00921 140 IIVQLKSDADYKQVVPIYNDVERSLERTnPPSGKFLDVtgsPAINYDIEREFGKDMGTTMAISGILVVLVLLLDFKRWWR 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 367 TLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENIDRILHENEqiSVKDAAIQAMQEVSSPVI 446
Cdd:TIGR00921 220 PLLPLVIILFGVAWVLGIMGWLGIPLYATTLLAVPMLIGVGIDYGIQTLNRYEEERDIGR--AKGEAIVTAVRRTGRAVL 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 447 SIVLVLCAVFVPVsFISGFvgEIQRQFALTLAISVTISGFVALTLTPSLCAL---FLRRNESKPFYIVQKFNDFfdwsTS 523
Cdd:TIGR00921 298 IALLTTSAGFAAL-ALSEF--PMVSEFGLGLVAGLITAYLLTLLVLPALLQSidiGREKVKKEIIAIGGKSSEI----EE 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 524 IFSAGVAYMLKRTIRFVLIFCIMLGAIFYLNKAVPnslvPEEDQGLMIGiINLPSASALHRTISEVD---HINQEVLKTN 600
Cdd:TIGR00921 371 ELSKVLSITVRHPVPALVAALIITGLGLYGAAGIK----PEVNIEKFIP-QDLPSLQARKVIESHMGgshDFATILVKAD 445
|
330 340
....*....|....*....|....*..
gi 1757279886 601 GVKDAMAMIGFDLFTSSLKENAAAMFI 627
Cdd:TIGR00921 446 DVRDPELVRFMDELSRDIKATGVAARV 472
|
|
| SecD |
COG0342 |
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular ... |
337-506 |
2.06e-07 |
|
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440111 [Multi-domain] Cd Length: 434 Bit Score: 54.74 E-value: 2.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 337 ESIKEVIKTFVEALILVIIVMYMFLKNFRatLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVE 416
Cdd:COG0342 268 DSIEKGLIAGLIGLLLVALFMLLYYRLPG--LVANIALALNVVLLLGVLSLLGATLTLPGIAGIILTIGMAVDANVLIFE 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 417 nidRILHE-NEQISVKdAAIQAMQEVSSPVI---SIVLVLCAVfvpVSFISGfVGEIqRQFALTLAISVTISGFVALTLT 492
Cdd:COG0342 346 ---RIREElRAGRSLR-AAIEAGFKRAFSTIldaNVTTLIAAV---VLFVLG-TGPV-KGFAVTLILGILISMFTAVPVT 416
|
170
....*....|....
gi 1757279886 493 PSLCALFLRRNESK 506
Cdd:COG0342 417 RPLLNLLLGRRRLK 430
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
337-492 |
7.21e-07 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 52.67 E-value: 7.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 337 ESIKEVIKTFVEALILVIIVMYMFLKNFraTLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVE 416
Cdd:TIGR01129 245 DSIEAGIKAGLIGLVLVLVFMILYYRLF--GLIAAIALVINIVLILAILSAFGATLTLPGIAGLILTIGMAVDANVLIYE 322
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1757279886 417 NIDRILHENEQISvkdAAIQAMQEVSSPVI--SIVLVLCAVFVPVSFISGFVgeiqRQFALTLAISVTISGFVALTLT 492
Cdd:TIGR01129 323 RIKEELRLGKSVR---QAIEAGFERAFSTIfdANITTLIAALILYVFGTGPV----KGFAVTLAIGIIASLFTALVFT 393
|
|
| PRK14726 |
PRK14726 |
protein translocase subunit SecDF; |
349-550 |
1.28e-06 |
|
protein translocase subunit SecDF;
Pssm-ID: 237805 [Multi-domain] Cd Length: 855 Bit Score: 52.80 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 349 ALILVIIVMYMFLKNFraTLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENIdrilheNEQI 428
Cdd:PRK14726 381 AAILVAALMIGFYGFL--GVIAVIALIVNVVLIIAVLSLLGATLTLPGIAGIVLTIGMAVDSNVLIYERI------REEE 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 429 SVKDAAIQAM-----QEVSSPVISIVLVLCAVFVPVSFISGFVgeiqRQFALTLAISVTISGFVALTLTPSLCALFLRRN 503
Cdd:PRK14726 453 KTGHSLIQALdrgfsRALATIVDANVTILIAAVILFFLGSGAV----RGFAVTLAVGILTTVFTAFTLTRSLVAVWLRRR 528
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1757279886 504 ESK--PFYIVqkfndffdwsTSIFS-AGVAYMLKRTIRFVLIFCIMLGAI 550
Cdd:PRK14726 529 RPKhlPKGVR----------TGLFEgANIRFMGIRRYVFTLSAALSLASL 568
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
349-498 |
2.22e-06 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 51.76 E-value: 2.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 349 ALILVIIVMYMFLKNFRATLIPMIAVPVSLL--GTFAGLYVLGFSINLLTLFALILAIGIvvDDAIIVVEnidRILHENE 426
Cdd:TIGR00921 576 GAILVLMILLAVFRNPIKAVFPLIAIGSGILwaIGLMGLRGIPSFLAMATTISIILGLGM--DYSIHLAE---RYFEERK 650
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1757279886 427 QISVKDAAIQAMQEVSSPVISIVLVLCAVFvpVSFISGFVGeIQRQFALTLAISVTISGFVALTLTPSLCAL 498
Cdd:TIGR00921 651 EHGPKEAITHTMERTGPGILFSGLTTAGGF--LSLLLSHFP-IMRNFGLVQGIGVLSSLTAALVVFPALLVL 719
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
349-494 |
3.60e-06 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 51.01 E-value: 3.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 349 ALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVEnidRILHENEQI 428
Cdd:COG4258 648 ALLLILLLLLLRLRSLRRALRVLLPPLLAVLLTLAILGLLGIPLNLFHLIALLLVLGIGIDYALFFTE---GLLDKGELA 724
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1757279886 429 SVKDAAIQAmqeVSSPVISI-VLVLCAvfVPVsfISGfvgeiqrqFALTLAISVTISGFVALTLTPS 494
Cdd:COG4258 725 RTLLSILLA---ALTTLLGFgLLAFSS--TPA--LRS--------FGLTVLLGILLALLLAPLLAPR 776
|
|
| 2A0604s01 |
TIGR00916 |
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY ... |
337-489 |
4.91e-06 |
|
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY proteins form the protein translocation appartus in prokaryotes. This family is specific for the SecD and SecF proteins. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273336 [Multi-domain] Cd Length: 192 Bit Score: 48.41 E-value: 4.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 337 ESIKEVIKTFVEALILVIIVM------YMFLKNFrATLIPMIAVPVSLLGtfaglyVLGFSINLLTLFALILAIGIVVDD 410
Cdd:TIGR00916 44 ELIKAGIIALLIGLVLVLLYMllryewRGAIAAI-AALVHDVILILGVLS------LFGATLTLPGIAGLLTIIGYSVDD 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1757279886 411 AIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVLVlcaVFVPVSFISGFVGEIQRQFALTLAISVTISGFVAL 489
Cdd:TIGR00916 117 TVVIFDRIREELRKYKGRTFREAINLGINQTLSRIIDTNVT---TLLAVLALYVFGGGAIKGFALTLGIGVIAGTYSSI 192
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
335-417 |
8.94e-05 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 46.53 E-value: 8.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 335 VIESIKEVIKTFVEA----LILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDD 410
Cdd:TIGR03480 703 ILESGDTVVGAFLQAfiyaLVAITVLLLLTLRRVRDVLLVLAPLLLAGLLTVAAMVLLGIPFNFANIIALPLLLGLGVDF 782
|
....*..
gi 1757279886 411 AIIVVEN 417
Cdd:TIGR03480 783 GIYMVHR 789
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
349-539 |
1.18e-04 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 46.14 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 349 ALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFA-GLYVLGfSINLLTLFALILAIGIVVDDAIIVV----ENIDRILH 423
Cdd:TIGR03480 278 SFVLVLVLLWLALRSPRLVFAVLVTLIVGLILTAAfATLAVG-HLNLISVAFAVLFIGLGVDFAIQFSlryrEERFRGGN 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 424 ENEQISVkdaaiqAMQEVSSPvisivLVLCAV--------FVPVSFIsGFVgeiqrQFALTLAISVTISGFVALTLTPSL 495
Cdd:TIGR03480 357 HREALSV------AARRMGAA-----LLLAALataagffaFLPTDYK-GVS-----ELGIIAGTGMFIALFVTLTVLPAL 419
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1757279886 496 CALF--LRRNESKPFYIVQKFNDF-FDW------STSIFSAGVAYMLKRTiRF 539
Cdd:TIGR03480 420 LRLLrpPRRRKPPGYATLAPLDAFlRRHrrpvlgVTLILGIAALALLPQL-RF 471
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
263-503 |
1.80e-04 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 45.53 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 263 RLKDVADVEIGSQQYSSQGrlngnDAVPIMINLQSGANALNTAKLVEAkMQELSKSFPEGLEYKIPYDTTKFV--IESIK 340
Cdd:COG2409 443 AVPGVASVQPPTRPEGTDG-----DAARLQVVPDGDPDSPEAIDLVDR-LRDAAAPALEGAEVLVGGTTAVNIdiSDALA 516
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 341 EVIKTFVEALILVIIVMYMFLknFRATLIPMIAVPVSLLGTFA-----------GLYVLGFSINLLTLFALILAIGIVV- 408
Cdd:COG2409 517 DDLPLVIPVVLGLIFLLLLLL--FRSVVAPLKAVLTNLLSLGAalgvlvlvfqhGWLLLGFTPGPLDSFVPLLLFVILFg 594
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 409 ---DDAIIVVeniDRILHENEQI-SVKDAAIQAMQeVSSPVI-SIVLVLCAVFvpVSFISGFVGEIQrQFALTLAISVTI 483
Cdd:COG2409 595 lgmDYEVFLV---SRIREEYDRGgGTREAVIRGLA-RTGRVItSAALIMAAVF--AAFATSPLVFLK-QIGFGLAVGVLL 667
|
250 260
....*....|....*....|.
gi 1757279886 484 SGF-VALTLTPSLCALFLRRN 503
Cdd:COG2409 668 DAFvVRMLLVPALMALLGRWN 688
|
|
| PRK13023 |
PRK13023 |
protein translocase subunit SecDF; |
350-506 |
2.14e-04 |
|
protein translocase subunit SecDF;
Pssm-ID: 171842 [Multi-domain] Cd Length: 758 Bit Score: 45.38 E-value: 2.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 350 LILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENIdrilheNEQIS 429
Cdd:PRK13023 286 LAALVVGLFMVLSYGILGVIALVALVVNIIILTAVLSLIGASISLASIAGLVLTIGLAVDAHILIYERV------REDRR 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 430 VKDAAIQAMQE-----VSSPVISIVLVLCAVFVPVSFISGFVgeiqRQFALTLAISVTISGFVALTLTPSLCALFLRRNE 504
Cdd:PRK13023 360 KGYSVVQAMESgfyraLSTIVDANLTTLIAALVLFLLGSGTV----HGFALTVAIGIGTTLFTTLTFTRLLIAQWVRTAK 435
|
..
gi 1757279886 505 SK 506
Cdd:PRK13023 436 PK 437
|
|
| PRK12911 |
PRK12911 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
350-514 |
5.12e-04 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 171815 [Multi-domain] Cd Length: 1403 Bit Score: 44.08 E-value: 5.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 350 LILVIIVMYMFLKnFrATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENI--DRILHENEQ 427
Cdd:PRK12911 919 LAVLIVLMSVYYR-F-GGVIASGAVLLNLLLIWAALQYLDAPLTLSGLAGIVLAMGMAVDANVLVFERIreEYLLSRSLS 996
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 428 ISVKDAAIQAMQEV-SSPVISIVLVLCAVFVPVSFISGfvgeiqrqFALTLAISVTISGFVALTLTPSLCALFLRRNESK 506
Cdd:PRK12911 997 ESVEAGYKKAFSAIfDSNLTTILASALLLMLDTGPIKG--------FALTLIIGIFSSMFTALFMTKFFFMIWMNKTQET 1068
|
....*...
gi 1757279886 507 PFYIVQKF 514
Cdd:PRK12911 1069 QLHMMNKF 1076
|
|
| Patched |
pfam02460 |
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic ... |
343-501 |
1.40e-03 |
|
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic Hedgehog. This protein associates with the smoothened protein to transduce hedgehog signals.
Pssm-ID: 308203 [Multi-domain] Cd Length: 793 Bit Score: 42.73 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 343 IKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENIDRil 422
Cdd:pfam02460 642 IQNIVITLICMFIVCFLFIPNPPCVFVITLAIASIDIGVFGFLSLWGVDLDPISMITIIMSIGFSVDFSAHIAYHFVR-- 719
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 423 heNEQISVKDAAIQAMQEVSSPVI-----SIVLVLCAVFVPVSFIsgfvgeiqRQFALTLAISVTISGFVALTLTPSLCA 497
Cdd:pfam02460 720 --SRGDTPAERVVDALEALGWPVFqgglsTILGVLVLLFVPSYMV--------VVFFKTVFLVVAIGLLHGLFILPIILS 789
|
....
gi 1757279886 498 LFLR 501
Cdd:pfam02460 790 LFVT 793
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
819-1024 |
3.62e-03 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 41.29 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 819 AQVQGQPAPGYTSGQAIEAIAQVAKETLGDDYSIAWSGSAYQEVSSKGTASYAF----ALGMIFVFLILAAQYeR----W 890
Cdd:COG2409 118 VTVTLDGDAGDEAAEAVDALRDAVAAAPAPGLTVYVTGPAALAADLNEAFEEDLgraeLITLPVALVVLLLVF-RslvaA 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757279886 891 LIPLavVTAVpFAVFGSFLLVYLRGFTNDIYFQT-GLLLLIGLSAKN--AILIVEFAMEERfKKGKGVFEAAVAAAKLRF 967
Cdd:COG2409 197 LLPL--LTAG-LAVGVALGLLALLAAFTDVSSFApNLLTMLGLGVGIdyALFLVSRYREEL-RAGEDREEAVARAVATAG 272
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1757279886 968 RPIIMTSLAFTFGVLPMIFatgAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLL 1024
Cdd:COG2409 273 RAVLFSGLTVAIALLGLLL---AGLPFLRSMGPAAAIGVAVAVLAALTLLPALLALL 326
|
|
| |
