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Conserved domains on  [gi|1751537100|ref|YP_009700633|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Xenopus muelleri]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Oxidored_q2 super family cl00492
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
1-98 1.38e-38

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


The actual alignment was detected with superfamily member MTH00126:

Pssm-ID: 444937  Cd Length: 98  Bit Score: 123.92  E-value: 1.38e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 1751537100 81 TTRTHGSDKLFNLNLLQC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.38e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 123.92  E-value: 1.38e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 1751537100 81 TTRTHGSDKLFNLNLLQC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.50e-11

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 55.26  E-value: 1.50e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100 11 AFILGLTGLaLNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVATTRTHGSDKL 90
Cdd:pfam00420  9 LFLIGLYGL-LLRRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 1751537100 91 FNLNLLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
 
Name Accession Description Interval E-value
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.38e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 123.92  E-value: 1.38e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 1751537100 81 TTRTHGSDKLFNLNLLQC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.71e-36

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 118.17  E-value: 2.71e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVA 80
Cdd:MTH00067   1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                         90
                 ....*....|....*...
gi 1751537100 81 TTRTHGSDKLFNLNLLQC 98
Cdd:MTH00067  81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.18e-32

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 107.24  E-value: 5.18e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1751537100 81 TTRTHGSDKLFNLNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.16e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 78.82  E-value: 1.16e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVA 80
Cdd:MTH00107   1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                         90
                 ....*....|....*...
gi 1751537100 81 TTRTHGSDKLFNLNLLQC 98
Cdd:MTH00107  81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 3.49e-19

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 74.95  E-value: 3.49e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVA 80
Cdd:MTH00043   1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                         90
                 ....*....|....*..
gi 1751537100 81 TTRTHGSDKLFNLNLLQ 97
Cdd:MTH00043  81 LSRNHNSDLVASLNLLQ 97
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 3.03e-18

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 72.28  E-value: 3.03e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  4 IHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVATTR 83
Cdd:MTH00181   1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                         90
                 ....*....|...
gi 1751537100 84 THGSDKLFNLNLL 96
Cdd:MTH00181  81 THGSDHLLKFNLL 93
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 12-98 4.98e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 59.22  E-value: 4.98e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100 12 FILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIpmLMLTFSACEAATGLALMVATTRTHGSDKLF 91
Cdd:MTH00188  13 VVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSL--VLLTFAACEASVGLALLVSLIRSHGSDYVS 90


                 ....*..
gi 1751537100 92 NLNLLQC 98
Cdd:MTH00188  91 SLNLIKC 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.50e-11

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 55.26  E-value: 1.50e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100 11 AFILGLTGLaLNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVATTRTHGSDKL 90
Cdd:pfam00420  9 LFLIGLYGL-LLRRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 1751537100 91 FNLNLLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.45e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 47.92  E-value: 1.45e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLipMLMLTFSACEAATGLALMVA 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLF--LIILTFGACEASLGLSLLVS 79

                         90
                 ....*....|....*...
gi 1751537100 81 TTRTHGSDKLFNLNLLQC 98
Cdd:MTH00149  80 LIRLHGNDYVSSLSSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-98 2.66e-07

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 44.36  E-value: 2.66e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100  1 MTLIHFSFCSAFILGLTGLALNRSHLLSALLCLEGTMLSMyVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVA 80
Cdd:MTH00013   1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSL-ALFIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVL 79

                         90
                 ....*....|....*...
gi 1751537100 81 TTRTHGSDKLFNLNLLQC 98
Cdd:MTH00013  80 MTRSYGNDMLKSLTSNKC 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-92 5.03e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 43.60  E-value: 5.03e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100 12 FILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWptMTMTHSFSLIPMLMLTFSACEAATGLALMVATTRTHGSDKLF 91
Cdd:MTH00162  11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLY--LSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFS 88


                 .
gi 1751537100 92 N 92
Cdd:MTH00162  89 S 89
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 2.68e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 41.94  E-value: 2.68e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100 12 FILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVATTRTHGSDKLF 91
Cdd:MTH00180  13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                 ....*.
gi 1751537100 92 NLNLLQ 97
Cdd:MTH00180  93 SLNLLR 98
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 2.70e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 39.28  E-value: 2.70e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100 12 FILGLTGLALNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALMVATTRTHGSDKLF 91
Cdd:MTH00001  13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                 ....*.
gi 1751537100 92 NLNLLQ 97
Cdd:MTH00001  93 SLNSLR 98
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-96 6.03e-03

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 33.23  E-value: 6.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751537100   1 MTLIHFSFCSA--FILGLTGLaLNRSHLLSALLCLEGTMLSMYVGLCIWPTMTMTHSFSLIPMLMLTFSACEAATGLALM 78
Cdd:PRK05715    2 IPLQHYLILAAilFCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAIL 80

                          90
                  ....*....|....*...
gi 1751537100  79 VATTRTHGSDKLFNLNLL 96
Cdd:PRK05715   81 LQLYRNRGTIDVDDLNEL 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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