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Conserved domains on  [gi|1751536847|ref|YP_009700398|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Xenopus petersii]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.76e-59

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 178.19  E-value: 1.76e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQL 80
Cdd:MTH00136    3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1751536847  81 NTPNIVIFWAALILTLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00136   83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.76e-59

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 178.19  E-value: 1.76e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQL 80
Cdd:MTH00136    3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1751536847  81 NTPNIVIFWAALILTLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00136   83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-111 2.94e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.26  E-value: 2.94e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847  18 ILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQLNTPNIVIFWAALI-LTL 96
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 1751536847  97 LTLGLIYEWLQGGLE 111
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 6-112 6.62e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.86  E-value: 6.62e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   6 LMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQLNTPNI 85
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFRELGW 89

                          90       100
                  ....*....|....*....|....*...
gi 1751536847  86 VIFWAALI-LTLLTLGLIYEWLQGGLEW 112
Cdd:COG0838    90 FGLIEMLVfIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.76e-59

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 178.19  E-value: 1.76e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQL 80
Cdd:MTH00136    3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1751536847  81 NTPNIVIFWAALILTLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00136   83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-114 1.34e-57

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 173.26  E-value: 1.34e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQL 80
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1751536847  81 NTPNIVIFWAALILTLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 7.37e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 156.19  E-value: 7.37e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQL 80
Cdd:MTH00113    2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1751536847  81 NTPNIVIFWAALILTLLTLGLIYEWLQGGLEWA 113
Cdd:MTH00113   82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 5-114 2.00e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 140.07  E-value: 2.00e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   5 ILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQLNTPN 84
Cdd:MTH00106    6 TLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLN 85

                          90       100       110
                  ....*....|....*....|....*....|
gi 1751536847  85 IVIFWAALILTLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00106   86 TMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-114 7.19e-39

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 126.25  E-value: 7.19e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQL 80
Cdd:MTH00042    3 NLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLI 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1751536847  81 NTPNIVIFWAALILTLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00042   83 TNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 8-112 1.64e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 117.31  E-value: 1.64e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   8 IALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQLNTPNivI 87
Cdd:MTH00203   10 IALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLS--L 87

                          90       100
                  ....*....|....*....|....*
gi 1751536847  88 FWAALILTLLTLGLIYEWLQGGLEW 112
Cdd:MTH00203   88 LLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-114 7.50e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 95.69  E-value: 7.50e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLPQMTP-DMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQ 79
Cdd:MTH00148    3 SILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLG 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1751536847  80 LNTPNIVIFWAALILTLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00148   83 SSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-111 2.94e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.26  E-value: 2.94e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847  18 ILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQLNTPNIVIFWAALI-LTL 96
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 1751536847  97 LTLGLIYEWLQGGLE 111
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-112 1.20e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 92.53  E-value: 1.20e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLPQMTP-DMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQ 79
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1751536847  80 LNTPNIVIFWAALILTLLTLGLIYEWLQGGLEW 112
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 5-112 2.36e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 91.69  E-value: 2.36e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   5 ILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQLNTPN 84
Cdd:MTH00055   11 LLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLF--PWCVVYNQIG 88

                          90       100
                  ....*....|....*....|....*....
gi 1751536847  85 IVIFWAALILTLLTLG-LIYEWLQGGLEW 112
Cdd:MTH00055   89 LFGFWVMYLFLIILTIgLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 5-112 1.09e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 87.42  E-value: 1.09e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   5 ILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQLNTPN 84
Cdd:MTH00018    6 LLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLF--PWCVLYNQIA 83

                          90       100
                  ....*....|....*....|....*....
gi 1751536847  85 IVIFWAALILTLLTLG-LIYEWLQGGLEW 112
Cdd:MTH00018   84 PFGFWTMVGFLFILTLgLIYEWIKGGLEW 112
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-114 3.00e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 86.58  E-value: 3.00e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLP-QMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQ 79
Cdd:MTH00202    3 LILFMSILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLK 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1751536847  80 LNTPNIVIFWAALILTLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00202   83 SSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 6-113 3.79e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 83.76  E-value: 3.79e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   6 LMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQLNTPNI 85
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLF--PWAVSFREIGW 92

                          90       100
                  ....*....|....*....|....*....
gi 1751536847  86 VIFWAALILTLLTLG-LIYEWLQGGLEWA 113
Cdd:PRK06602   93 LGFVEAMIFILVLLVgLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 6-112 6.62e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.86  E-value: 6.62e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   6 LMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQLNTPNI 85
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFRELGW 89

                          90       100
                  ....*....|....*....|....*...
gi 1751536847  86 VIFWAALI-LTLLTLGLIYEWLQGGLEW 112
Cdd:COG0838    90 FGLIEMLVfIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-113 1.81e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 81.83  E-value: 1.81e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   1 MTATILMIALALSTILAILSFWLP-QMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPSPWAAQ 79
Cdd:MTH00012    3 LMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILM 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1751536847  80 LNTPNIVIFWAALILTLLTLGLIYEWLQGGLEWA 113
Cdd:MTH00012   83 TSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 7-112 2.64e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 74.20  E-value: 2.64e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   7 MIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQLNTPNIV 86
Cdd:MTH00030   18 IILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLF--PWSIVFNQLNLF 95

                          90       100
                  ....*....|....*....|....*..
gi 1751536847  87 IFWAALILTLLTLG-LIYEWLQGGLEW 112
Cdd:MTH00030   96 SFWIVYTFLIVLAIgLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-112 2.38e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 50.83  E-value: 2.38e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847  32 KLSPYECGFDPLGSARLP--FSMRFFLIAILFLLFDLEIALLLPspWAAQLNTPNIVIFWA-ALILTLLTLGLIYEWLQG 108
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEmALFMLTVFVAYAYVWRRG 114


                  ....
gi 1751536847 109 GLEW 112
Cdd:PRK07928  115 GLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 5-112 1.14e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.22  E-value: 1.14e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   5 ILMIALALSTILAILSFWLPQM----TPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLpsPWAAQL 80
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLY--PWAMSF 86

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1751536847  81 NTPNIVIFWAALILTLLTLG-LIYEWLQGGLEW 112
Cdd:CHL00022   87 DVLGVSAFIEALIFVLILIVgLVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 5-72 1.02e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 46.43  E-value: 1.02e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1751536847   5 ILMIALALSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLL 72
Cdd:MTH00092    7 VFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
5-112 1.81e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 40.88  E-value: 1.81e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1751536847   5 ILMIALALSTILAILSF----WLPQMTPDMEKLSPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLLPspWAAQL 80
Cdd:PRK07756   11 IVLIFLLLGILLPVVALtlgrMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAY 88

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1751536847  81 NTPNI-VIFWAALILTLLTLGLIYEWLQGGLEW 112
Cdd:PRK07756   89 DKLGLfALIEMLIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-72 4.96e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.50  E-value: 4.96e-05
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1751536847  34 SPYECGFDPLGSARLPFSMRFFLIAILFLLFDLEIALLL 72
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLL 77
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
32-77 5.49e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 39.65  E-value: 5.49e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1751536847  32 KLSPYECGFDPLGSARlPFSMRFFLIAILFLLFDLEIALLLpsPWA 77
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMF--PWA 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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