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Conserved domains on  [gi|1732945831|gb|TYS22603|]
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assimilatory sulfite reductase (NADPH) hemoprotein subunit [Bacillus subtilis]

Protein Classification

assimilatory sulfite reductase (NADPH) hemoprotein subunit( domain architecture ID 11486660)

assimilatory sulfite reductase (NADPH) hemoprotein subunit is a component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide

EC:  1.8.1.2
Gene Ontology:  GO:0016491|GO:0051539|GO:0050661|GO:0004783|GO:0009337
PubMed:  23153334|7569952|29852252

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK13504 PRK13504
NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;
3-569 0e+00

NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;


:

Pssm-ID: 237402 [Multi-domain]  Cd Length: 569  Bit Score: 1127.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831   3 TKILKAPDGSPSDVERIKEESDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRV 82
Cdd:PRK13504    1 HPGPLAVEGKLSDVERIKLESNYLRGTIAEELNDGLTGGFSEDDFQLLKFHGSYQQDDRDIRAERAEQKLEPAYQFMLRC 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  83 RMPGGVSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQSE 162
Cdd:PRK13504   81 RLPGGVITPQQWLALDKLADEYGNGTLRLTTRQTFQFHGILKKNLKPVIQTINSVLLDTLAACGDVNRNVMCTPNPYESR 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 163 IHSEVYEWSKKLSDDLLPRTRAYHEIWLDEERVAGTP-EEVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVE 241
Cdd:PRK13504  161 LHAEAYEWAKKISDHLLPRTRAYAEIWLDGEKVATFSgTEEEPIYGKTYLPRKFKIAVAVPPDNDVDVYANDLGFVAIAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 242 DGKLIGFNVAIGGGMGMTHGDTATYPQLAKVIGFCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEE 321
Cdd:PRK13504  241 NGKLVGFNVLVGGGMGMTHGDKETYPRLADELGYVPPEDVLDVAEAVVTTQRDYGNRTDRKNARLKYTLERVGLDWFKAE 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 322 LENRLGWSLEEAKPYHFDHNGDRYGWVEGIKDKWHFTLFVEGGRVTDYDDYKLMTGLREIAKVHTGEFRLTANQNLIIAN 401
Cdd:PRK13504  321 VERRAGKKLEPARPYEFTGRGDRLGWVEGIDGKWHLTLFIENGRIKDYPGRPLKTGLREIAKIHKGDFRLTANQNLIIAN 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 402 VSSDKKDEISALIEQYGLTDGKHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEIIDENGLRDQEITIRMTGCP 481
Cdd:PRK13504  401 VPPSDKAKIEALLREYGLIDGVEESPLRRNSMACVALPTCGLAMAEAERYLPSFIDRIEALLAKHGLSDEHIVIRMTGCP 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 482 NGCARHALGEIGFIGKAPGKYNMYLGAAFDGSRLSKMYRENIGEEDILSELRVLLSRYAKERDEGEHFGDFVIRAGIIKA 561
Cdd:PRK13504  481 NGCARPYLAEIGLVGKAPGRYNLYLGGSFNGTRLPKMYRENITEEEILATLDPLLGRWAKEREPGEGFGDFVIRAGIIRE 560


                  ....*....
gi 1732945831 562 TTDGT-NFH 569
Cdd:PRK13504  561 VLDGArDFH 569
 
Name Accession Description Interval E-value
PRK13504 PRK13504
NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;
3-569 0e+00

NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;


Pssm-ID: 237402 [Multi-domain]  Cd Length: 569  Bit Score: 1127.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831   3 TKILKAPDGSPSDVERIKEESDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRV 82
Cdd:PRK13504    1 HPGPLAVEGKLSDVERIKLESNYLRGTIAEELNDGLTGGFSEDDFQLLKFHGSYQQDDRDIRAERAEQKLEPAYQFMLRC 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  83 RMPGGVSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQSE 162
Cdd:PRK13504   81 RLPGGVITPQQWLALDKLADEYGNGTLRLTTRQTFQFHGILKKNLKPVIQTINSVLLDTLAACGDVNRNVMCTPNPYESR 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 163 IHSEVYEWSKKLSDDLLPRTRAYHEIWLDEERVAGTP-EEVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVE 241
Cdd:PRK13504  161 LHAEAYEWAKKISDHLLPRTRAYAEIWLDGEKVATFSgTEEEPIYGKTYLPRKFKIAVAVPPDNDVDVYANDLGFVAIAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 242 DGKLIGFNVAIGGGMGMTHGDTATYPQLAKVIGFCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEE 321
Cdd:PRK13504  241 NGKLVGFNVLVGGGMGMTHGDKETYPRLADELGYVPPEDVLDVAEAVVTTQRDYGNRTDRKNARLKYTLERVGLDWFKAE 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 322 LENRLGWSLEEAKPYHFDHNGDRYGWVEGIKDKWHFTLFVEGGRVTDYDDYKLMTGLREIAKVHTGEFRLTANQNLIIAN 401
Cdd:PRK13504  321 VERRAGKKLEPARPYEFTGRGDRLGWVEGIDGKWHLTLFIENGRIKDYPGRPLKTGLREIAKIHKGDFRLTANQNLIIAN 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 402 VSSDKKDEISALIEQYGLTDGKHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEIIDENGLRDQEITIRMTGCP 481
Cdd:PRK13504  401 VPPSDKAKIEALLREYGLIDGVEESPLRRNSMACVALPTCGLAMAEAERYLPSFIDRIEALLAKHGLSDEHIVIRMTGCP 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 482 NGCARHALGEIGFIGKAPGKYNMYLGAAFDGSRLSKMYRENIGEEDILSELRVLLSRYAKERDEGEHFGDFVIRAGIIKA 561
Cdd:PRK13504  481 NGCARPYLAEIGLVGKAPGRYNLYLGGSFNGTRLPKMYRENITEEEILATLDPLLGRWAKEREPGEGFGDFVIRAGIIRE 560


                  ....*....
gi 1732945831 562 TTDGT-NFH 569
Cdd:PRK13504  561 VLDGArDFH 569
CysI TIGR02041
sulfite reductase (NADPH) hemoprotein, beta-component; Sulfite reductase (NADPH) catalyzes a ...
 17-559 0e+00

sulfite reductase (NADPH) hemoprotein, beta-component; Sulfite reductase (NADPH) catalyzes a six electron reduction of sulfite to sulfide in prokaryotic organisms. It is a complex oligomeric enzyme composed of two different peptides with a subunit composition of alpha(8)-beta(4). The alpha component, encoded by cysJ, is a flavoprotein containing both FMN and FAD, while the beta component, encoded by cysI, is a siroheme, iron-sulfur protein. In Salmonella typhimurium and Escherichia coli, both the alpha and beta subunits of sulfite reductase are located in a unidirectional gene cluster along with phosphoadenosine phosphosulfate reductase, which catalyzes a two step reduction of PAPS to give free sulfite. In cyanobacteria and plant species, sulfite reductase ferredoxin (EC 1.8.7.1) catalyzes the reduction of sulfite to sulfide. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 273941 [Multi-domain]  Cd Length: 541  Bit Score: 960.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  17 ERIKEESDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRVRMPGGVSTPEQWLV 96
Cdd:TIGR02041   1 ERIKEESNYLRGTILEDLADPLTGGFKGDNFQLIRFHGMYQQDDRDLRAERAEQKLEPRYAMMLRCRLPGGVITPKQWLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  97 MDDLSQKYGN-GTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQSEIHSEVYEWSKKLS 175
Cdd:TIGR02041  81 IDKFAREYTNyGSIRLTNRQTFQFHGILKKNLKPVHQMLHSVGLDSLATAGDVNRNVLCTSNPYESELHAEAYEWAKKIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 176 DDLLPRTRAYHEIWLDEERVAGTpEEVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVEDGKLIGFNVAIGGG 255
Cdd:TIGR02041 161 EHLLPRTRAYAEIWLDQEKVAGT-EEVEPILGPTYLPRKFKTTVVIPPQNDVDVYANDLGFVAIAENGKLVGFNVLIGGG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 256 MGMTHGDTATYPQLAKVIGFCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEELENRLGWSLEEAKP 335
Cdd:TIGR02041 240 LSMEHGNKKTYPRLASEIGFIPPEHTLAVAEAVVTTQRDFGNRTDRKNARTKYTIERMGLDTFKAEVERRAGIKFEPARP 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 336 YHFDHNGDRYGWVEGIKDKWHFTLFVEGGRVTDYDDYKLMTGLREIAKVHTGEFRLTANQNLIIANVSSDKKDEISALIE 415
Cdd:TIGR02041 320 YEFTGRGDRIGWVKGIDGNWHLTLFIENGRILDYPDKPLKTGLLEIAKIHKGDFRITANQNLIIAGVPEGGKAKIEKLAR 399

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 416 QYGLTDgkHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEIIDENGLRDQEITIRMTGCPNGCARHALGEIGFI 495
Cdd:TIGR02041 400 QYGLIN--AVTALRENSMACVSFPTCPLAMAEAERYLPDFIDKLDNIMAKHGLSDEEIVLRVTGCPNGCGRAMLAEIGLV 477

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1732945831 496 GKAPGKYNMYLGAAFDGSRLSKMYRENIGEEDILSELRVLLSRYAKERDEGEHFGDFVIRAGII 559
Cdd:TIGR02041 478 GKAPGRYNLHLGGNRIGTRIPRLYKENITEPEILAELDELIGRWAKERKPGEGFGDFLIRAGII 541
CysI COG0155
Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]; ...
 13-560 0e+00

Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]; Sulfite reductase, beta subunit (hemoprotein) is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439925 [Multi-domain]  Cd Length: 519  Bit Score: 620.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  13 PSDVERIKEESDYLR-GTLKEVMLDRISAGIPDDDNRL-MKHHGSYLQDDrdlrnerqkqklePAYQFMLRVRMPGGVST 90
Cdd:COG0155     1 LYKYERIKREDVRSRlGTFAEQLGRFLTGEISEDDFRLrLKFHGLYQQRD-------------PDGAFMLRVRIPGGVLT 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  91 PEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQS--EIHsEVY 168
Cdd:COG0155    68 PEQLRALADIAREYGRGYLHLTTRQNIQLHWILLEDLPEILRELAEVGLTTIGACGDVVRNVTASPLAGVDpdELF-DVR 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 169 EWSKKLSDDLLprtrayheiwldeervagtpeeVEPMYgpLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVEDGKLIGF 248
Cdd:COG0155   147 PYAEAISQHLL----------------------GHPEY--TYLPRKFKIAFSGPPEDDADVEINDLGFIAVVKEDGLVGF 202

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 249 NVAIGGGMGMThgdtatyPQLAKVIG-FCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEELENR-L 326
Cdd:COG0155   203 NVLVGGGLGRT-------PRLADVLGeFVPPEDLLDVAEAVVRVFRDYGDRDNRKKARLKYLVDDLGVEKFREEVEEEyL 275

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 327 GWSLEEA-KPYHFDHNGDRYGWVEGIKD-KWHFTLFVEGGRVTDYDdyklMTGLREIAKVH-TGEFRLTANQNLIIANVS 403
Cdd:COG0155   276 GFPLEPApRPLPAFARWDHLGVHEQKQDgLYYVGLSVENGRITDEQ----LRALADLAERYgSGEIRLTPNQNLILADVP 351

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 404 SDKKDEISALIEQYGLTDgkHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEiiDENGLR-DQEITIRMTGCPN 482
Cdd:COG0155   352 EEDLPALEAALRALGLAT--PPSGLRRDSIACPGLPTCKLAIAESKRLAPALADRLEE--DLDGLHdDEPIRIRISGCPN 427

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 483 GCARHALGEIGFIGKAPGK----YNMYLGAAFDG-SRLSKMYRENIGEEDILSELRVLLSRYAKERDEGEHFGDFVIRAG 557
Cdd:COG0155   428 SCGRHYIADIGLVGKAKKGvveaYQLYLGGGLGGdARLGRKYGPKVPADEIPDALERLLEAYLAEREEGESFGDFVRRVG 507


                  ...
gi 1732945831 558 IIK 560
Cdd:COG0155   508 IEP 510
NIR_SIR pfam01077
Nitrite and sulphite reductase 4Fe-4S domain; Sulphite and nitrite reductases are vital in the ...
 170-325 1.82e-47

Nitrite and sulphite reductase 4Fe-4S domain; Sulphite and nitrite reductases are vital in the biosynthetic assimilation of sulphur and nitrogen, respectfully. They are also both important for the dissimilation of oxidized anions for energy transduction.


Pssm-ID: 426031 [Multi-domain]  Cd Length: 153  Bit Score: 162.82  E-value: 1.82e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 170 WSKKLSDDLLPRTRAYHEIWLDEERVAGTPE-EVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVEDGKLIGF 248
Cdd:pfam01077   1 GDNVRNVTLCPGAGLCPEELLDTRPLAKAIEdEFEPDYGFPYLPRKFKIAVSGCPNNCVAAHANDIGFVGVWKDGGEIGF 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1732945831 249 NVAIGGGMGMTHGDTATYPQLakviGFCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEELENR 325
Cdd:pfam01077  81 NILVGGGLGRTPGAAATLKVV----PFVPEEDVLEVIEAILEVYRDHGDRENRKKERLKYLIERLGLEKFREEVEER 153
 
Name Accession Description Interval E-value
PRK13504 PRK13504
NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;
3-569 0e+00

NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;


Pssm-ID: 237402 [Multi-domain]  Cd Length: 569  Bit Score: 1127.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831   3 TKILKAPDGSPSDVERIKEESDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRV 82
Cdd:PRK13504    1 HPGPLAVEGKLSDVERIKLESNYLRGTIAEELNDGLTGGFSEDDFQLLKFHGSYQQDDRDIRAERAEQKLEPAYQFMLRC 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  83 RMPGGVSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQSE 162
Cdd:PRK13504   81 RLPGGVITPQQWLALDKLADEYGNGTLRLTTRQTFQFHGILKKNLKPVIQTINSVLLDTLAACGDVNRNVMCTPNPYESR 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 163 IHSEVYEWSKKLSDDLLPRTRAYHEIWLDEERVAGTP-EEVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVE 241
Cdd:PRK13504  161 LHAEAYEWAKKISDHLLPRTRAYAEIWLDGEKVATFSgTEEEPIYGKTYLPRKFKIAVAVPPDNDVDVYANDLGFVAIAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 242 DGKLIGFNVAIGGGMGMTHGDTATYPQLAKVIGFCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEE 321
Cdd:PRK13504  241 NGKLVGFNVLVGGGMGMTHGDKETYPRLADELGYVPPEDVLDVAEAVVTTQRDYGNRTDRKNARLKYTLERVGLDWFKAE 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 322 LENRLGWSLEEAKPYHFDHNGDRYGWVEGIKDKWHFTLFVEGGRVTDYDDYKLMTGLREIAKVHTGEFRLTANQNLIIAN 401
Cdd:PRK13504  321 VERRAGKKLEPARPYEFTGRGDRLGWVEGIDGKWHLTLFIENGRIKDYPGRPLKTGLREIAKIHKGDFRLTANQNLIIAN 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 402 VSSDKKDEISALIEQYGLTDGKHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEIIDENGLRDQEITIRMTGCP 481
Cdd:PRK13504  401 VPPSDKAKIEALLREYGLIDGVEESPLRRNSMACVALPTCGLAMAEAERYLPSFIDRIEALLAKHGLSDEHIVIRMTGCP 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 482 NGCARHALGEIGFIGKAPGKYNMYLGAAFDGSRLSKMYRENIGEEDILSELRVLLSRYAKERDEGEHFGDFVIRAGIIKA 561
Cdd:PRK13504  481 NGCARPYLAEIGLVGKAPGRYNLYLGGSFNGTRLPKMYRENITEEEILATLDPLLGRWAKEREPGEGFGDFVIRAGIIRE 560


                  ....*....
gi 1732945831 562 TTDGT-NFH 569
Cdd:PRK13504  561 VLDGArDFH 569
CysI TIGR02041
sulfite reductase (NADPH) hemoprotein, beta-component; Sulfite reductase (NADPH) catalyzes a ...
 17-559 0e+00

sulfite reductase (NADPH) hemoprotein, beta-component; Sulfite reductase (NADPH) catalyzes a six electron reduction of sulfite to sulfide in prokaryotic organisms. It is a complex oligomeric enzyme composed of two different peptides with a subunit composition of alpha(8)-beta(4). The alpha component, encoded by cysJ, is a flavoprotein containing both FMN and FAD, while the beta component, encoded by cysI, is a siroheme, iron-sulfur protein. In Salmonella typhimurium and Escherichia coli, both the alpha and beta subunits of sulfite reductase are located in a unidirectional gene cluster along with phosphoadenosine phosphosulfate reductase, which catalyzes a two step reduction of PAPS to give free sulfite. In cyanobacteria and plant species, sulfite reductase ferredoxin (EC 1.8.7.1) catalyzes the reduction of sulfite to sulfide. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 273941 [Multi-domain]  Cd Length: 541  Bit Score: 960.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  17 ERIKEESDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRVRMPGGVSTPEQWLV 96
Cdd:TIGR02041   1 ERIKEESNYLRGTILEDLADPLTGGFKGDNFQLIRFHGMYQQDDRDLRAERAEQKLEPRYAMMLRCRLPGGVITPKQWLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  97 MDDLSQKYGN-GTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQSEIHSEVYEWSKKLS 175
Cdd:TIGR02041  81 IDKFAREYTNyGSIRLTNRQTFQFHGILKKNLKPVHQMLHSVGLDSLATAGDVNRNVLCTSNPYESELHAEAYEWAKKIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 176 DDLLPRTRAYHEIWLDEERVAGTpEEVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVEDGKLIGFNVAIGGG 255
Cdd:TIGR02041 161 EHLLPRTRAYAEIWLDQEKVAGT-EEVEPILGPTYLPRKFKTTVVIPPQNDVDVYANDLGFVAIAENGKLVGFNVLIGGG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 256 MGMTHGDTATYPQLAKVIGFCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEELENRLGWSLEEAKP 335
Cdd:TIGR02041 240 LSMEHGNKKTYPRLASEIGFIPPEHTLAVAEAVVTTQRDFGNRTDRKNARTKYTIERMGLDTFKAEVERRAGIKFEPARP 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 336 YHFDHNGDRYGWVEGIKDKWHFTLFVEGGRVTDYDDYKLMTGLREIAKVHTGEFRLTANQNLIIANVSSDKKDEISALIE 415
Cdd:TIGR02041 320 YEFTGRGDRIGWVKGIDGNWHLTLFIENGRILDYPDKPLKTGLLEIAKIHKGDFRITANQNLIIAGVPEGGKAKIEKLAR 399

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 416 QYGLTDgkHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEIIDENGLRDQEITIRMTGCPNGCARHALGEIGFI 495
Cdd:TIGR02041 400 QYGLIN--AVTALRENSMACVSFPTCPLAMAEAERYLPDFIDKLDNIMAKHGLSDEEIVLRVTGCPNGCGRAMLAEIGLV 477

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1732945831 496 GKAPGKYNMYLGAAFDGSRLSKMYRENIGEEDILSELRVLLSRYAKERDEGEHFGDFVIRAGII 559
Cdd:TIGR02041 478 GKAPGRYNLHLGGNRIGTRIPRLYKENITEPEILAELDELIGRWAKERKPGEGFGDFLIRAGII 541
CysI COG0155
Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]; ...
 13-560 0e+00

Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]; Sulfite reductase, beta subunit (hemoprotein) is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439925 [Multi-domain]  Cd Length: 519  Bit Score: 620.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  13 PSDVERIKEESDYLR-GTLKEVMLDRISAGIPDDDNRL-MKHHGSYLQDDrdlrnerqkqklePAYQFMLRVRMPGGVST 90
Cdd:COG0155     1 LYKYERIKREDVRSRlGTFAEQLGRFLTGEISEDDFRLrLKFHGLYQQRD-------------PDGAFMLRVRIPGGVLT 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  91 PEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQS--EIHsEVY 168
Cdd:COG0155    68 PEQLRALADIAREYGRGYLHLTTRQNIQLHWILLEDLPEILRELAEVGLTTIGACGDVVRNVTASPLAGVDpdELF-DVR 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 169 EWSKKLSDDLLprtrayheiwldeervagtpeeVEPMYgpLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVEDGKLIGF 248
Cdd:COG0155   147 PYAEAISQHLL----------------------GHPEY--TYLPRKFKIAFSGPPEDDADVEINDLGFIAVVKEDGLVGF 202

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 249 NVAIGGGMGMThgdtatyPQLAKVIG-FCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEELENR-L 326
Cdd:COG0155   203 NVLVGGGLGRT-------PRLADVLGeFVPPEDLLDVAEAVVRVFRDYGDRDNRKKARLKYLVDDLGVEKFREEVEEEyL 275

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 327 GWSLEEA-KPYHFDHNGDRYGWVEGIKD-KWHFTLFVEGGRVTDYDdyklMTGLREIAKVH-TGEFRLTANQNLIIANVS 403
Cdd:COG0155   276 GFPLEPApRPLPAFARWDHLGVHEQKQDgLYYVGLSVENGRITDEQ----LRALADLAERYgSGEIRLTPNQNLILADVP 351

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 404 SDKKDEISALIEQYGLTDgkHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEiiDENGLR-DQEITIRMTGCPN 482
Cdd:COG0155   352 EEDLPALEAALRALGLAT--PPSGLRRDSIACPGLPTCKLAIAESKRLAPALADRLEE--DLDGLHdDEPIRIRISGCPN 427

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 483 GCARHALGEIGFIGKAPGK----YNMYLGAAFDG-SRLSKMYRENIGEEDILSELRVLLSRYAKERDEGEHFGDFVIRAG 557
Cdd:COG0155   428 SCGRHYIADIGLVGKAKKGvveaYQLYLGGGLGGdARLGRKYGPKVPADEIPDALERLLEAYLAEREEGESFGDFVRRVG 507


                  ...
gi 1732945831 558 IIK 560
Cdd:COG0155   508 IEP 510
PLN00178 PLN00178
sulfite reductase
 14-557 7.39e-178

sulfite reductase


Pssm-ID: 177773 [Multi-domain]  Cd Length: 623  Bit Score: 516.23  E-value: 7.39e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  14 SDVERIKEESDYLRGTLKEVMLDRiSAGIPDDDNRLMKHHGSYLQDDRDLRNERqkqklepAYQFMLRVRMPGGVSTPEQ 93
Cdd:PLN00178   54 SKVEIIKENSNFLRHPLNEELATE-APNINEDAVQLIKFHGSYQQDNREKRGGK-------AYQFMLRTKQPAGKVPNRL 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  94 WLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQSEIHSEVYEWSKK 173
Cdd:PLN00178  126 YLVMDDLADEFGIGTLRLTTRQTFQLHGVLKKDLKTVMSSIIKNMGSTLGACGDVNRNVLAPAAPFARKDYLFAQELAKN 205

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 174 LSDDLLPRTRAYHEIWLDEERVAGT-PEEV-----------------EPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLG 235
Cdd:PLN00178  206 IAALLAPQSGAYYDIWVDGEKIMSAePPEVtkarndnshgtnfedspEPIYGTQFLPRKFKIAVTVPGDNSVDILTNDIG 285

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 236 FIAIV-EDGKLIGFNVAIGGGMGMTHGDTATYPQLAKVIGFCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLG 314
Cdd:PLN00178  286 VVVVSdEAGEPQGYNIYVGGGMGRTHRNETTFPRLADPLGYVPKEDILYAVKAIVATQRDYGRRDDRKQSRMKYLVHSWG 365

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 315 LETVKEELENRLGWSLEEAKP---YHFDhngDRYGWVEGIKDKWHFTLFVEGGRVTDyddyKLMTGLREIAKVHTGEFRL 391
Cdd:PLN00178  366 IEKFRSVVEQYYGKKFEPFRElpeWEFK---SYLGWHEQGDGKLFYGVHVDNGRIKG----EAKKALREVIEKYNLPVRL 438

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 392 TANQNLIIANVSSDKKDEISALIEQYGLTDGKHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEIIDENGLR-D 470
Cdd:PLN00178  439 TPNQNLILCDIRPAWKEPITAALAAAGLLEPEEVDPLNRTAMACPALPLCPLAITEAERGIPDILKRVRAMFNKVGLKyD 518

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 471 QEITIRMTGCPNGCARHALGEIGFIGKAPGKYNMYLGAAFDGSRLSKMYRENIGEEDILSELRVLLSRYAKERDEGEHFG 550
Cdd:PLN00178  519 ESVVVRMTGCPNGCARPYMAELGFVGDGPNSYQIWLGGTPNQTRLAEPFMDKVKVDDLEKVLEPLFYMWKQQRQEKESFG 598


                  ....*..
gi 1732945831 551 DFVIRAG 557
Cdd:PLN00178  599 DFTNRVG 605
sir TIGR02042
ferredoxin-sulfite reductase; Distantly related to the iron-sulfur hemoprotein of sulfite ...
 8-557 1.83e-160

ferredoxin-sulfite reductase; Distantly related to the iron-sulfur hemoprotein of sulfite reductase (NADPH) found in Proteobacteria and Eubacteria, sulfite reductase (ferredoxin) is a cyanobacterial and plant monomeric enzyme that also catalyzes the reduction of sulfite to sulfide. [Central intermediary metabolism, Sulfur metabolism]


Pssm-ID: 131097 [Multi-domain]  Cd Length: 577  Bit Score: 470.10  E-value: 1.83e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831   8 APDGSPSDVERIKEESDYLRGTLKEVMLDRiSAGIPDDDNRLMKHHGSYLQDDRDLRNERQkqklEPAYQFMLRVRMPGG 87
Cdd:TIGR02042   1 AKPQKRSKVEILKERSNFLREPLNEQLLEE-ATHFNEDAVQILKFHGSYQQDNRDNRGKGQ----EKDYQFMLRTKNPGG 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  88 VSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMCASNPYQSEIHsev 167
Cdd:TIGR02042  76 YVPPQLYLTLDDLADEYGNGTLRATTRQTFQLHGILKKNLKTVISTIVKNLGSTLGACGDLNRNVMAPPAPFRKRPE--- 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 168 YEWSKKLSD---DLL-PRTRAYHEIWLDEERVA-----------------GT--PEEVEPMYGPLYLPRKFKIGIAVPPS 224
Cdd:TIGR02042 153 YEFAREYADniaDLLtPQSGAYYELWLDGEKVMsaepdpevvaarndnshGTnfADSPEPLYGTQYLPRKFKIAVTVPGD 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 225 NDIDVFSQDLGFIAIV-EDGKLIGFNVAIGGGMGMTHGDTATYPQLAKVIGFCRPEQLYDIAEKTITIQRDYGNRSVRKN 303
Cdd:TIGR02042 233 NSIDLFTQDIGLVVVSnERGELEGFNIYVGGGMGRTHNKEETFARLADPLGYVPKEDIYYAVKAIVATQRDYGDRDDRRH 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 304 ARFKYTVDRLGLETVKEELENRLGWSLE---EAKPYHFDhngDRYGWVEGIKDKWHFTLFVEGGRVTDYDDYKLMTGLRE 380
Cdd:TIGR02042 313 ARMKYLISDWGIEKFREVVEQYFGKKIApvrELPEFEYK---DYLGWHEQGDGKWFLGLHIDSGRVKDDGNWQLKKALRE 389

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 381 IAKVHTGEFRLTANQNLIIANVSSDKKDEISALIEQYGLTDGKHHSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVE 460
Cdd:TIGR02042 390 IVEKYNLPVRLTPNQNIILYDIQPEWKRAITTVLAQRGVLQPEAIDPLNRYAMACPALPTCGLAITESERAIPGILKRIR 469

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 461 EIIDENGLRDQEITIRMTGCPNGCARHALGEIGFIGKAPGKYNMYLGAAFDGSRLSKMYRENIGEEDILSELRVLLSRYA 540
Cdd:TIGR02042 470 ALLEKVGLPDEHFVVRMTGCPNGCARPYMAELGFVGSAPNSYQVWLGGSPNQTRLARPFIDKLKDGDLEKVLEPLFVHFK 549

                         570
                  ....*....|....*..
gi 1732945831 541 KERDEGEHFGDFVIRAG 557
Cdd:TIGR02042 550 QSRQSGESFGDFCDRVG 566
NIR_SIR pfam01077
Nitrite and sulphite reductase 4Fe-4S domain; Sulphite and nitrite reductases are vital in the ...
 170-325 1.82e-47

Nitrite and sulphite reductase 4Fe-4S domain; Sulphite and nitrite reductases are vital in the biosynthetic assimilation of sulphur and nitrogen, respectfully. They are also both important for the dissimilation of oxidized anions for energy transduction.


Pssm-ID: 426031 [Multi-domain]  Cd Length: 153  Bit Score: 162.82  E-value: 1.82e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 170 WSKKLSDDLLPRTRAYHEIWLDEERVAGTPE-EVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVEDGKLIGF 248
Cdd:pfam01077   1 GDNVRNVTLCPGAGLCPEELLDTRPLAKAIEdEFEPDYGFPYLPRKFKIAVSGCPNNCVAAHANDIGFVGVWKDGGEIGF 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1732945831 249 NVAIGGGMGMTHGDTATYPQLakviGFCRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDRLGLETVKEELENR 325
Cdd:pfam01077  81 NILVGGGLGRTPGAAATLKVV----PFVPEEDVLEVIEAILEVYRDHGDRENRKKERLKYLIERLGLEKFREEVEER 153
nirA PRK09566
ferredoxin-nitrite reductase; Reviewed
 77-550 1.26e-46

ferredoxin-nitrite reductase; Reviewed


Pssm-ID: 236572 [Multi-domain]  Cd Length: 513  Bit Score: 170.96  E-value: 1.26e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  77 QFMLRVRMPGGVSTPEQWLVMDDLSQKYG-NGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVmcA 155
Cdd:PRK09566   65 KFMLRLRVPNGILTSEQLRVLASIVQRYGdDGSADITTRQNLQLRGILLEDLPEILNRLKAVGLTSVQSGMDNVRNI--T 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 156 SNPYQSEIHSEVY---EWSKKLSDDLlprtrayheiwldEERVAGTPEEVEpmygplyLPRKFKIGIAVPPSNDIDVFSQ 232
Cdd:PRK09566  143 GSPVAGIDPDELIdtrPLTQKLQDML-------------TNNGEGNPEFSN-------LPRKFNIAIAGGRDNSVHAEIN 202

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 233 DLGFIAIVEDGKLiGFNVAIGGGMGMTHGDTATyPQLAKVigfcRPEQLYDIAEKTITIQRDYGNRSVRKNARFKYTVDR 312
Cdd:PRK09566  203 DIAFVPAYKDGVL-GFNVLVGGFFSSQRCAYAI-PLNAWV----KPDEVVRLCRAILEVYRDNGLRANRQKGRLMWLIDE 276

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 313 LGLETVKEELENRLGWSLEEAKPYHF--DHNGDRYGWVEGIKDKWHFT-LFVEGGRVTDYDDYKLMTglreIAKVH-TGE 388
Cdd:PRK09566  277 WGIEKFRAAVEAQFGPPLLTAAPGDEidWEKRDHIGVHPQKQAGLNYVgLHVPVGRLYAEDMFELAR----LAEVYgSGE 352

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 389 FRLTANQNLIIANVSSDKKDEISA--LIEQYGLtdgkHHSALRRSSMACVALPTCGLAMAEA-ERYLptlldKVEEIIDE 465
Cdd:PRK09566  353 IRLTVEQNVIIPNIPDENLETFLAepLLQKFSL----EPGPLARGLVSCTGNQYCNFALIETkNRAL-----ALAKELDA 423

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 466 NGLRDQEITIRMTGCPNGCARHALGEIGFIG---KAPGK----YNMYLGaafdGS-----RLSKMYRENIGEEDILSELR 533
Cdd:PRK09566  424 ELDLPQPVRIHWTGCPNSCGQPQVADIGLMGtkaRKNGKtvegVDIYMG----GKvgkdaKLGECVQKGIPCEDLKPVLK 499

                         490
                  ....*....|....*..
gi 1732945831 534 VLLSryakerdegEHFG 550
Cdd:PRK09566  500 DLLI---------EQFG 507
nirA PRK09567
NirA family protein;
78-555 1.75e-43

NirA family protein;


Pssm-ID: 236573 [Multi-domain]  Cd Length: 593  Bit Score: 163.65  E-value: 1.75e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  78 FMLRVRMPGGVSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGIlkwnMKKTIQTIHSGLLD----TIAACGDVNRNVm 153
Cdd:PRK09567  117 YMCRLRIPNGILTHWQFAGLADLADRHGGGYSHVTTRANLQLREI----PPEHAVPVLEGLVDlgltARGSGADNIRNV- 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 154 cASNPYQSEIHSEVYewskklsdDLLPRTRAYHEiWLDEERVagtpeevepMYGplyLPRKFKI----GIAVPPSNDidv 229
Cdd:PRK09567  192 -TGSPTAGIDPQELL--------DTRPYAREWHH-HILNDRS---------LYG---LPRKFNVafdgGGRIATLED--- 246

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 230 fSQDLGFIAI-VEDGKL----IGFNVAIGGGMGmtHGDTATYpqlAKVIgfCRPEQLYDIAEKTITIQRDYGNRSVRKNA 304
Cdd:PRK09567  247 -TNDIGFQAVrVLEGAGvapgVYFRLVLGGITG--HKDFARD---TGVL--LRPEEATAVADAIVRVFIENGDRTNRKKA 318

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 305 RFKYTVDRLGLETVKEELENRLGWSLEEAKPYHFDHNG--DRYGWVeGIKDKWHFTLFVEG-----GRVTDyddyKLMTG 377
Cdd:PRK09567  319 RLKYVLDAWGFDKFLEAVEEKLGRPLTRVPAEAVAPRPaaDRFAHV-GVHPQKQPGLNWIGvvlpvGRLTT----DQMRG 393

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 378 LREIAKVH-TGEFRLTANQNLIIANVSSDKKDEISALIEQYGLTDGKHHsaLRRSSMACVALPTCGLAMAEAERYLPTLL 456
Cdd:PRK09567  394 LAKIAARYgDGEIRLTVWQNLLISGVPDADVAAVEAAIEALGLTTEASS--IRAGLVACTGNAGCKFAAADTKGHALAIA 471

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 457 DKVEEIIDenglRDQEITIRMTGCPNGCARHALGEIGFIG-KAPGK-------YNMYLGAAF-DGSRLSKMYRENIGEED 527
Cdd:PRK09567  472 DYCEPRVA----LDQPVNIHLTGCHHSCAQHYIGDIGLIGaKVAVSegdtvegYHIVVGGGFgEDAAIGREVFRDVKAED 547

                         490       500
                  ....*....|....*....|....*....
gi 1732945831 528 ILSELRVLLSRYAKERDE-GEHFGDFVIR 555
Cdd:PRK09567  548 APRLVERLLRAYLAHRQGpDETFQAFTRR 576
PLN02431 PLN02431
ferredoxin--nitrite reductase
 77-543 4.89e-30

ferredoxin--nitrite reductase


Pssm-ID: 178050 [Multi-domain]  Cd Length: 587  Bit Score: 124.51  E-value: 4.89e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  77 QFMLRVRMPGGVSTPEQWLVMDDLSQKYG-NGTLKLTTRETFQMHGILKWNMKKTIQTIHSGLLDTIAACGDVNRNVMca 155
Cdd:PLN02431  136 RFMMRLKLPNGVTTSAQTRYLASVIEKYGeDGCADVTTRQNWQIRGVVLPDVPAILKGLEEVGLTSLQSGMDNVRNPV-- 213

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 156 SNPYQS----EIhSEVYEWSKKLSDDLLPRTRayheiwldeervaGTPEEVEpmygplyLPRKFKIGIavppSNDIDVFS 231
Cdd:PLN02431  214 GNPLAGidphEI-VDTRPYTNLLSDYITNNGR-------------GNPEITN-------LPRKWNVCV----VGSHDLFE 268

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 232 Q----DLGFIAIVEDGKLiGFNVAIGGGMGMTHGDTATyPQLAKVIGfcrpEQLYDIAEKTITIQRDYGNRSVRKNARFK 307
Cdd:PLN02431  269 HphinDLAYMPATKDGRF-GFNLLVGGFFSPKRCAEAI-PLDAWVPA----DDVVPLCKAILEAFRDLGTRGNRQKTRMM 342

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 308 YTVDRLGLETVKEELENRL-GWSLEEAKPYHF-DHNGDRYGWV-------EGIKdkwHFTLFVEGGRVTDYDdyklmtgL 378
Cdd:PLN02431  343 WLIDELGVEGFRSEVEKRMpNGELERAASEDLvDKKWERRDYLgvhpqkqEGLS---YVGLHVPVGRLQAAD-------M 412

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 379 REIAKVH----TGEFRLTANQNLIIANVSSDKKDEISA--LIEQYGLTDGKhhsaLRRSSMACVALPTCGLAMAEAERYL 452
Cdd:PLN02431  413 DELARLAdeygSGELRLTVEQNIIIPNVPNSKVEALLAepLLQRFSPNPGL----LLKGLVACTGNQFCGQAIIETKARA 488

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 453 PTLLDKVEEIIDenglRDQEITIRMTGCPNGCARHALGEIGFIG----KAPGK----YNMYLGAAF-DGSRLSKMYRENI 523
Cdd:PLN02431  489 LKVTEELERLVE----VPRPVRMHWTGCPNSCGQVQVADIGFMGcmarDENGKavegADIFVGGRVgSDSHLAEEYKKGV 564

                         490       500
                  ....*....|....*....|..
gi 1732945831 524 GEEDILSELR-VLLSRY-AKER 543
Cdd:PLN02431  565 PCDELVPVVAdILIEEFgAKER 586
CobG TIGR02435
precorrin-3B synthase; An iron-sulfur protein. An oxygen atom from dioxygen is incorporated ...
 79-500 5.45e-17

precorrin-3B synthase; An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 274131 [Multi-domain]  Cd Length: 390  Bit Score: 82.92  E-value: 5.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831  79 MLRVRMPGGVSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKwNMKKTIQTIHS-GLLDTIAACGDVnRNVMCASn 157
Cdd:TIGR02435  19 LVRVRLPGGRLTPAQAIGLADLAERLGNGIIEVTARGNLQLRGLTA-DHDALSQALLAaGLGAAGAAADDI-RNIEVSP- 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 158 pyqseihsevyewSKKLSDDLLPRTRAYHEIWLDEERVAGTPEEvepmygplyLPRKFKIGIAVPPSNDIDVFSQDLGFI 237
Cdd:TIGR02435  96 -------------LAGIDPGEIADTRPLAAELRAALENERALLE---------LPPKFSVAIDGGGRLVLLGDTADVRLQ 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 238 AiVEDGKLIGFNVAIGGgmgmthgDTATYPQLAKVIGFCRPEQLYDIAEKTITiqrdygnrsVRKNARFKYTVDRLG--- 314
Cdd:TIGR02435 154 A-LTTGAGVAWVVSLAG-------ISTSARSLVTVAPDAAVPVAVALLRVFVE---------LGGAARGRDLDDAFLfal 216

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 315 -LETVKEELENRLGWSLEEAKPYHFDHNGdRYGWVEGIKDKWHFTLFVEGGRVTdyddYKLMTGLREIAKVH-TGEFRLT 392
Cdd:TIGR02435 217 aLELVEDSRPLIPDAAEGEAPRPAVDAAA-PLGLHPQGDAGVTLGAGLALGQLT----AAQLRGLAQLAQALgDGDLRLT 291

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 393 ANQNLIIANVSSDKKDEISALIEQYGL-TDGkhhSALRRSSMACVALPTCGLAMAEAERYLPTLLDKVEEIIDenglrdq 471
Cdd:TIGR02435 292 PWRALLVLGLPPERADAAQRALAALGLvTSA---SDPRARIIACTGAPGCASALADTRADAEALAAYCEPTAP------- 361

                         410       420
                  ....*....|....*....|....*....
gi 1732945831 472 eITIRMTGCPNGCARHALGEIGFIGKAPG 500
Cdd:TIGR02435 362 -ITVHLSGCAKGCAHPGPAAITLVAAGAG 389
NIR_SIR_ferr pfam03460
Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key ...
 78-122 1.19e-12

Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to both biosynthetic assimilation of sulfur and nitrogen and dissimilation of oxidized anions for energy transduction. Two copies of this repeat are found in Nitrite and Sulfite reductases and form a single structural domain.


Pssm-ID: 377044 [Multi-domain]  Cd Length: 67  Bit Score: 62.93  E-value: 1.19e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1732945831  78 FMLRVRMPGGVSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGI 122
Cdd:pfam03460   8 YMVRVRVPGGRLTAEQLRALADIAEKYGDGEIRLTTRQNLELHGV 52
NIR_SIR_ferr pfam03460
Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key ...
 354-417 2.88e-10

Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to both biosynthetic assimilation of sulfur and nitrogen and dissimilation of oxidized anions for energy transduction. Two copies of this repeat are found in Nitrite and Sulfite reductases and form a single structural domain.


Pssm-ID: 377044 [Multi-domain]  Cd Length: 67  Bit Score: 56.38  E-value: 2.88e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1732945831 354 KWHFTLFVEGGRVTdyddYKLMTGLREIAKVH-TGEFRLTANQNLIIANVSSDKKDEISALIEQY 417
Cdd:pfam03460   7 DYMVRVRVPGGRLT----AEQLRALADIAEKYgDGEIRLTTRQNLELHGVPEEDLPELLEELAEA 67
NIR_SIR pfam01077
Nitrite and sulphite reductase 4Fe-4S domain; Sulphite and nitrite reductases are vital in the ...
 430-558 1.17e-03

Nitrite and sulphite reductase 4Fe-4S domain; Sulphite and nitrite reductases are vital in the biosynthetic assimilation of sulphur and nitrogen, respectfully. They are also both important for the dissimilation of oxidized anions for energy transduction.


Pssm-ID: 426031 [Multi-domain]  Cd Length: 153  Bit Score: 39.56  E-value: 1.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732945831 430 RSSMACVALPTCGLAMAEAERYLPTLLDKVEEIIDENGL-RDQEITIrmTGCPNGCARHALGEIGFIG--KAPGK--YNM 504
Cdd:pfam01077   5 RNVTLCPGAGLCPEELLDTRPLAKAIEDEFEPDYGFPYLpRKFKIAV--SGCPNNCVAAHANDIGFVGvwKDGGEigFNI 82

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1732945831 505 YLGAAFdGSRLSK----MYRENIGEEDILSELRVLLSRYAKERDEG----EHFGDFVIRAGI 558
Cdd:pfam01077  83 LVGGGL-GRTPGAaatlKVVPFVPEEDVLEVIEAILEVYRDHGDREnrkkERLKYLIERLGL 143
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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