|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-746 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1235.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 1 MEFLYKNIWIVPVCPFVASMSVGLGLFFFSKATKSLRRICAIVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWIFNKD 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 81 ISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 161 LIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELIDSNRVNSFLANMCALLLFLGPVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMIFMGGLRKYMPITGTTFLL 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 401 GTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEGDFRGNSDKYTDKTI---FYKSIWG 477
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNssfYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 478 NlqtlyKRDKVFSNNSYASFSDQTGDSSeipedFFSSpkierrNKYLNSEKLLNVLSYYEGSNNPNKISedafvsikrev 557
Cdd:CHL00025 481 K-----EESKKINKLLLLLTMNNNERVS-----FFSK------KTYKIDGNVRNMIRSFITIFGNKKTF----------- 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 558 kndniLYPKESDNLMLFSLICLAIPTVFIGFIGVSFSHEGIDSDLLSDFLAPLIGSSYKD--NSENLVDFLVKSIPSVSI 635
Cdd:CHL00025 534 -----SYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHQNsnNSVDWYEFLTNAIFSVSI 608
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 636 ALGGIFISSSIYGPISS-------REMREEIDLQKGFGGYLFNYLSNWSYYRGYIDNLYNVIFIEGTRILSKSICFFDQW 708
Cdd:CHL00025 609 AFFGIFIASFLYGPVYSslqnldlINSFVKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRR 688
|
730 740 750
....*....|....*....|....*....|....*...
gi 1732113667 709 IIDGIVNGIGILSFFGGEGMRYGGAGRISSYLFGLIVG 746
Cdd:CHL00025 689 VIDGITNGVGITSFFVGEGIKYVGGGRISSYLFLYLFY 726
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-746 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 806.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 1 MEFLYKNIWIVPVCPFVASMSVGLGLFFFSKATKSLRRICAIVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWIFNKD 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 81 ISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 161 LIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELIDSNRVNSFLANMCALLLFLGPVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMIFMGGLRKYMPITGTTFLL 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 401 GTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEGDFRGNsdkytDKTIfyksiwgnlq 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFRGN-----DKEL---------- 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 481 tlykRDKVFSNNSYASFSDQTGDSSEIPEDFFSSpkierrnkylnsekllnvlsyyegsnnpnkisedafvsikrevknd 560
Cdd:PRK07376 466 ----QKELLAAADAPGHHEGHHEEHGEHHHHSGS---------------------------------------------- 495
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 561 nilyPKESDNLMLFSLICLAIPTVFIGFIGVSFshegidSDLLSDFLAPLIGSSYKDNSENLVDFLVKSIPSVSIALGGI 640
Cdd:PRK07376 496 ----PHESPWTMTLPLVVLAVPSVLIGLLGTPW------NNRFEAFLHAPGEALEAAAHFEWGEFLILAGASVGIALIGI 565
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 641 FISSSIYgpissreMREEIDLQKGFGGY--LFNYLSN-WsyyrgYIDNLYNVIFIEGTRILSKSICFFDQWIIDGIVNGI 717
Cdd:PRK07376 566 TLASLMY-------LLKKIDPAAIAERFppLYQFSLNkW-----YLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLT 633
|
730 740 750
....*....|....*....|....*....|..
gi 1732113667 718 GILSFFGGEGMRYGGAGRISSY---LFGLIVG 746
Cdd:PRK07376 634 GLVTLGSGEGLKYFENGRAQFYaliVFGAVLG 665
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
8-746 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 619.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 8 IWIVPVCPFVASmsvgLGLFFFSKATKslRRICAIVSIISLSIAmFISFSILWQQIRGNPTYQLLWSWIFNKDISLQIGF 87
Cdd:COG1009 4 LWLIPLLPLLGA----LLAGLLGRRLG--RRAAGWLAALAPLAA-FVLSLLLFPAVLGGEVVVELYTWIPVGSLGLDFGF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 88 LIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFS 167
Cdd:COG1009 77 RLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 168 RPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELIDSNrvnsfLANMCALLLFLGPVAKSAQFPLH 247
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSP-----LLTLILLLLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 248 VWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQL 327
Cdd:COG1009 232 FWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 328 GYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEpivgyspdkSQNMIFMGGLRKYMPITGTTFLLGTLSLCG 407
Cdd:COG1009 312 GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 408 IPPLACFWSKDEILVDSWISSA---FLGWIAWITAGLTGFYMFRMYFVTFEGDFRGNSDKytdktifyksiwgnlqtlyk 484
Cdd:COG1009 383 IPPFAGFFSKEAILEAALEAGGlgpLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPK-------------------- 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 485 rdkvfsnnsyasfsdqtgdsseipedffsspkierrnkylnsekllnvlsyyegsnnpnkisedafvsikrevkndnilY 564
Cdd:COG1009 443 -------------------------------------------------------------------------------H 443
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 565 PKESDNLMLFSLICLAIPTVFIGFIGVSFshegidsdlLSDFLAPligSSYKDNSENLVDFLVKSIPSVSIALGGIFISS 644
Cdd:COG1009 444 PHESPWLMTLPLVVLAVLSLVLGLLLPGL---------LEGLLAP---AAVLGGELHLAHGLLLNALPLLLSLLGIALGY 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 645 SIYGpissreMREEIDLQKGFGGylfnyLSNWSYYRGYIDNLYNVIFIEGTRILSKSIcFFDQWIIDGIVNGIGILSFFG 724
Cdd:COG1009 512 LLYL------KRPLPALAERLKP-----LYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFS 579
|
730 740
....*....|....*....|..
gi 1732113667 725 GEGMRYGGAGRISSYLFGLIVG 746
Cdd:COG1009 580 GRLLRRLQTGYLQFYALTILLG 601
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
8-746 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 590.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 8 IWIVPVCPFVASMSVGLGLFFFSKatkslrRICAIVSIISLSIAMFISFSILWQ--QIRGNPTYQLLWSWIFNKDISLQI 85
Cdd:PRK06590 5 LWLIVLLPLIGALILGLFGRRIGE------KWAHLVGTGLVGLSALLSLVVFFDflLGGGRAFSQTLWTWISVGDFDVDF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 86 GFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFW 165
Cdd:PRK06590 79 GLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 166 FSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELIDsnrVNSFLANMCALLLFLGPVAKSAQFP 245
Cdd:PRK06590 159 YKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFG---LGWSALTLICLLLFIGAMGKSAQFP 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 246 LHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMS 325
Cdd:PRK06590 236 LHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 326 QLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSL 405
Cdd:PRK06590 316 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLAL 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 406 CGIPPLACFWSKDEILVDSWIS-SAFLGWIAWITAGLTGFYMFRMYFVTFEGDFRGNSDKytdktifyksiwgnlqtlyk 484
Cdd:PRK06590 388 IGIPPFAGFFSKDEILEAAFANgHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIHH-------------------- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 485 rdkvfsnnsyasfsdqtgdsseipedffsspkierrnkylnsekllnvlsyyegsnnpnkisedafvsikrevkndnily 564
Cdd:PRK06590 --------------------------------------------------------------------------------
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 565 PKESDNLMLFSLICLAIPTVFIGFIGVSFshegidsdlLSDFLaPLIGSSYKDNSENLVDFLVKSIPSVsIALGGIFISS 644
Cdd:PRK06590 448 PHESPAVMTLPLIVLAVLSVFAGALIVPP---------FLGVL-PLTTELAHGEAEHHLPVWVALLPLV-VALAGIALAW 516
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 645 SIYgpISSREMREEIdlqkgfgGYLFNYLSNWSYYRGYIDNLYNVIFIEGTRILSKSIC-FFDQWIIDGIVNGIGILSFF 723
Cdd:PRK06590 517 LLY--LKKPTLPTSI-------AAPGRFLYTLLRNKYYFDELYEKVFVKPGLALARLLWkDGDDGIIDGLVPNSARLVGG 587
|
730 740
....*....|....*....|...
gi 1732113667 724 GGEGMRYGGAGRISSYLFGLIVG 746
Cdd:PRK06590 588 GSRVLRRLQTGYLRHYAASMLIG 610
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
8-746 |
2.62e-171 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 506.43 E-value: 2.62e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 8 IWIVPVCPFVASMSVGLGLFFFSKatkslrRICAIVSIISLSIAMFISFSILWQQIRGN---PTYQLLWSWIFNKDISLQ 84
Cdd:TIGR01974 3 IFLIVFLPLIGFLIAGLFGRRIGE------RVSGIIGIGSVGLSAALSAFVFVDFFLNGegeAFTQSLFPWISVGGFQVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 85 IGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGF 164
Cdd:TIGR01974 77 FGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 165 WFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELIDSnrvnsfLANMCALLLFLGPVAKSAQF 244
Cdd:TIGR01974 157 WYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTM 324
Cdd:TIGR01974 231 PLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTM 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 325 SQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEpivgyspdKSQNMIFMGGLRKYMPITGTTFLLGTLS 404
Cdd:TIGR01974 311 SQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLA 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 405 LCGIPPLACFWSKDEILVDSWISS--AFLGWIAWITAGLTGFYMFRMYFVTFEGdfrgnsdkytdktifyksiwgnlqtl 482
Cdd:TIGR01974 383 LIGFPGFAGFFSKDLILEAAFASGthSFLFVAGLIGAFLTAFYSFRLIFMVFHG-------------------------- 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 483 ykrdkvfsnnsyasfsdqtgdsseipedffsspkierrnkylnsekllnvlsyyegsnnPNKISEDAfvsikrevkndni 562
Cdd:TIGR01974 437 -----------------------------------------------------------KERHEADA------------- 444
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 563 lYPKESDNLMLFSLICLAIPTVFIGFIGVSFSHegidsdllsdFLAPLIGSSYKDNSENLVDFLVKSIPSVSIALGGIFI 642
Cdd:TIGR01974 445 -HPHESPLVMLLPLIVLAVGSVFAGFFIVPLFE----------FLKGVLPTSAEPALEHHHVPALEIWSPTAVAILGILL 513
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 643 SSSIYgpISSREMREEIDLQKGFggyLFNYLSN-WsyyrgYIDNLYNVIFIEGTRILSKSICFF-DQWIIDGIVNGIGIL 720
Cdd:TIGR01974 514 AYLLY--LGNPTLPAKIAQRHSG---LYRLLLNkW-----YFDELYDKVFVKPYLFLGKLLWKDpDDKIIDGFGPGIARL 583
|
730 740
....*....|....*....|....*.
gi 1732113667 721 SFFGGEGMRYGGAGRISSYLFGLIVG 746
Cdd:TIGR01974 584 VGAISKRLRKSQTGYLRWYAASMVVG 609
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
25-465 |
2.16e-115 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 362.02 E-value: 2.16e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 25 GLFFFSKATKSLRRICAIVSIISLSIAMFISFSILwqqIRGNPTYQLLWSWIFNKDISLQIGFLIDPLTSIMLVSVTSVG 104
Cdd:MTH00210 17 GLFGRKIGTKGAGILTSSCIVISAIVSCCIFYETT---LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVS 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 105 ILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRV 184
Cdd:MTH00210 94 ALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRV 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 185 GDFGLLLGILGIYWITGSFDIHNLSERFIELIDSNRVNsflanMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
Cdd:MTH00210 174 GDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLT-----IICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 265 HAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
Cdd:MTH00210 249 HAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLF 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL--- 421
Cdd:MTH00210 329 HLMNHAFFKALLFLSAGSVIHAV--------SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILelt 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1732113667 422 VDSWIsSAFLGWIAWITAGLTGFYMFRMYFVTFEGDFRGNSDKY 465
Cdd:MTH00210 401 YDKYY-IAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVF 443
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
15-454 |
3.70e-113 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 355.92 E-value: 3.70e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 15 PFVASMSVGL-GLFFFSKATKSLRRICAIvsiISLSIAMFISFSILwqqIRGNPTYQLLWSWIFNKDISLQIGFLIDPLT 93
Cdd:MTH00020 9 PLLGALLSGLfGRKIGEKGAGILTSSCLI---ISLSWSFLIFYEIL---FNSSTTYIKLWRWLDSDLLTVYFGLQFDGLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 94 SIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAAN 173
Cdd:MTH00020 83 AIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 174 ACQKAFITNRVGDFGLLLGILGIYWITGSFDihnLSERFIELIDSNRVNSFLanMCaLLLFLGPVAKSAQFPLHVWLPDA 253
Cdd:MTH00020 163 AAIKAMLVNRVGDIGLLLAMFLLWDRFGSLD---FSSVFNMVVSAPSSDITL--IC-LFLFIGAVGKSAQLGLHTWLPDA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 254 MEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLA 333
Cdd:MTH00020 237 MEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 334 LGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLAC 413
Cdd:MTH00020 317 CGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTG 388
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1732113667 414 FWSKDEILVDSWISS--AFLGWIAWITAGLTGFYMFRMYFVTF 454
Cdd:MTH00020 389 FYSKDLILELAFGQYylIFAYWLGCFSALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
10-454 |
4.48e-94 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 307.66 E-value: 4.48e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 10 IVPVCPFVASMSVGL-GLFFFSKATKSLRRICAIVSIIslsIAMFISFSILwqqIRGNPTYQLLWSWIFNKDISLQIGFL 88
Cdd:MTH00032 4 LVLLLPFINAFLLGFfGRLIGTIGSGILSTICMGSSTL---IALFLAYEVL---INDAVVHIELYKWIESEIFITHIGLL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 89 IDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSR 168
Cdd:MTH00032 78 YDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 169 PSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIE--LIDSNRVNSFLAN-------MCALLLFLGPVA 239
Cdd:MTH00032 158 IQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGsgIMDRGYYGGGAYEsplapfaIIGILLLIGCIG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGL 319
Cdd:MTH00032 238 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 320 AYSTMSQLGYMMLALGI-GSYRAALFHLITHAYSKALLFLGSGSVIHSMEPivgyspdKSQNMIFMGGLRKYMPITGTTF 398
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMM 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 399 LLGTLSLCGIPPLACFWSKDEIL------------------------------VDSWIS--------SAFLGWIAWITAG 440
Cdd:MTH00032 391 LIGSFSIMGLPYLTGFYSKDLILeltysgrnmgipfgssllkiqgdigikkddRGSIGGpegypsrgSAFAFWLGTVAAL 470
|
490
....*....|....
gi 1732113667 441 LTGFYMFRMYFVTF 454
Cdd:MTH00032 471 LTAFYSIRLVYITF 484
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
16-462 |
8.04e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 296.86 E-value: 8.04e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 16 FVASMSVGLGLFFFSKATKSLRRICAIVSIISLSIAMFISFSILWQQiRGNPTYQLLWSWIFNKDISLQIGFLIDPLTSI 95
Cdd:MTH00211 5 FNSGFLLILILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLLIFLD-QGLETILTNWSWINLGLFSLNLSFKFDFYSIF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 96 MLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANAC 175
Cdd:MTH00211 84 FTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 176 QKAFITNRVGDFGLLLGILGIYWITGSFDIHNLserfieLIDSNRVNSFLanmcaLLLFLGPVAKSAQFPLHVWLPDAME 255
Cdd:MTH00211 164 LQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQL------FILNLDLTLFL-----LGLLLAAMGKSAQFGFHPWLPSAME 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 256 GPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALG 335
Cdd:MTH00211 233 GPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 336 IGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFW 415
Cdd:MTH00211 313 LNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFF 384
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1732113667 416 SKDEILVDSWIS--SAFLGWIAWITAGLTGFYMFRMYFVTFEGDFRGNS 462
Cdd:MTH00211 385 SKDLILESMNGSylNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS 433
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
12-453 |
2.32e-86 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 279.72 E-value: 2.32e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 12 PVCPFVASMSVGLGLFFFSKAtkslRRICAIVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWIFnkdiSLQIGFLIDP 91
Cdd:COG0651 5 LILPVLLPLLAAALLLLLGRR----RRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPA----PFGIVLVADR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 92 LTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWfSRPSA 171
Cdd:COG0651 77 LSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG-GTKEA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 172 ANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELidsnrvNSFLANMCALLLFLGPVAKSAQFPLHVWLP 251
Cdd:COG0651 156 LRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL------DPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 252 DAM-EGPTPISALIHAAtMVAAGIFFVARMFHLF---EVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQL 327
Cdd:COG0651 230 DAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 328 GYMMLALGIGSYR---AALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTTFLLGTLS 404
Cdd:COG0651 309 GYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALA 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1732113667 405 LCGIPPLACFWSKDEILVDSWISSAFLGWIAW-ITAGLTGFYMFRMYFVT 453
Cdd:COG0651 380 LAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLlLSSLLTLAYFVRIFGRA 429
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-746 |
3.32e-85 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 282.18 E-value: 3.32e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 1 MEFLYKNIWIVPVCPFVA---SMSVGLGLFffskaTKSLRRICAIVSIIsLSIAMFISFSILWQQIRGNPTYQLLWSWIF 77
Cdd:PRK07390 2 LQFLLQTSWLIPLYGLIGallSLPWSPGII-----RRTGPRPAAYLNLL-MTLLAFVHSLLALRAIWNQPPQQLSFPWLQ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 78 NKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMC 157
Cdd:PRK07390 76 VADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLS 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 158 SYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSerfiELIDSNRVNSFLANMCALLLFLGP 237
Cdd:PRK07390 156 TYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLA----AWAATANLDPLTATLLGLALIAGP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKR 317
Cdd:PRK07390 232 TGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKR 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 318 GLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSmepivgyspDKSQNMIFMGGLRKYMPITGTT 397
Cdd:PRK07390 311 ALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLA 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 398 FLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFegdfrgnsdkytdktifyksiWG 477
Cdd:PRK07390 382 FLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF---------------------LG 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 478 NLQTLYKRdkvfsnnsyasfsdqtgdSSEIPEdffsspkierrnkylnsekllnvlsyyegsnnpnkisedafvsikrev 557
Cdd:PRK07390 441 KPQQKTRR------------------SPEVLW------------------------------------------------ 454
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 558 kndnilypkesdnLMLFSLICLAIPTVFIGFIGVSFSHEGIDSDLLSDFLAPLIGSSykdnsenlvdflvksipsvsiaL 637
Cdd:PRK07390 455 -------------PMALPMVILAGFTLHLPLLLQQWGLLPSWEALNLWAAPLLVASG----------------------L 499
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 638 GGIFISSSIY-GPISSREMREEIDLQKGFGGYLFnylsnwsyyrgYIDNLYNVIFIEGTRILSKSICFFDQWIIDGIVNG 716
Cdd:PRK07390 500 LGVLLGAWIYlNKAWSRPIQLPLRFLQDLLAYDF-----------YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNL 568
|
730 740 750
....*....|....*....|....*....|
gi 1732113667 717 IGILSFFGGEGMRYGGAGRISSYLFGLIVG 746
Cdd:PRK07390 569 VGLATLFSGQGLKYSVSGQSQFYVLTILLG 598
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
1.78e-83 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 267.26 E-value: 1.78e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 141 SPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSerfieLIDSNR 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELS-----KALTGG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 221 VNSFLANMCALLLFLGPVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFFVARMFHLFE-VLPFTMNIISWVG 298
Cdd:pfam00361 76 LNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 299 GITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIG---SYRAALFHLITHAYSKALLFLGSGSVIHSMEpivgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1732113667 376 dKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
41-454 |
2.94e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 277.62 E-value: 2.94e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 41 AIVSIISLSIAMFISFsILWQQIRGNPTYQLLWSWIFNKDISLQIGFLIDPLTSIMLvsvtSVGILV----MIYSDSYMS 116
Cdd:MTH00208 58 SISLLKTLAFLSLINL-LIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFF----SVALFVtwsiIEFSHYYMS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 117 HDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGI 196
Cdd:MTH00208 133 NDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 197 YWITGSFdihNLSErfieLIDSNRVNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFF 276
Cdd:MTH00208 213 LINFNSW---NLNE----ILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 277 VARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALL 356
Cdd:MTH00208 286 LIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAML 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 357 FLGSGSVIHSMepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWIS-SAFLGWI- 434
Cdd:MTH00208 366 FLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASiSNLLSIIl 437
|
410 420
....*....|....*....|
gi 1732113667 435 AWITAGLTGFYMFRMYFVTF 454
Cdd:MTH00208 438 ALIATLLTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
73-453 |
4.27e-83 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 276.27 E-value: 4.27e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 73 WSWIFNKDISLQIGFLIDPLtSIMLVSVTsvgILV----MIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIY 148
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY-SLMFLPIA---LFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 149 IFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLllgILGIYWI---TGSFDIHNLserfielidsnrvnsFL 225
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGL---ILSMAWLamtLNTWEIQQL---------------FS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 226 ANMCALLLFLGPVA----KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGIT 301
Cdd:MTH00004 204 PTQTPTLPLLGLILaatgKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALT 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 302 ALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNM 381
Cdd:MTH00004 284 TLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDI 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1732113667 382 IFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKD---EILVDSWISSaflgWIAWIT---AGLTGFYMFRM-YFVT 453
Cdd:MTH00004 356 RKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNA----WALLLTllaTSFTAAYSLRMiLLVQ 430
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-441 |
7.20e-80 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 271.79 E-value: 7.20e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 51 AMFISFSILWQQIRGNPTYQLLWSWIFNKDISLqiGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSL 130
Cdd:PRK12647 26 ALFLYFLSFIPEIAAGETVRGGYAWVPSLGVNL--SFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 131 FTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHnlse 210
Cdd:PRK12647 104 FMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLS---- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 211 rfiELIDSNRV--NSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLP 288
Cdd:PRK12647 180 ---ELLASGDVirEHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTP 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 289 FTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGS---YRAALFHLITHAYSKALLFLGSGSVIH 365
Cdd:PRK12647 257 LWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDH 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 366 SmepiVGySPDKSQnmifMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL-----VDSWisSAFLGWIAWITAG 440
Cdd:PRK12647 337 E----TG-TRDITK----LGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYealleAPLW--SLILTVAAVLGNA 405
|
.
gi 1732113667 441 L 441
Cdd:PRK12647 406 L 406
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-437 |
2.60e-75 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 262.82 E-value: 2.60e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 10 IVPVCPFVASMSVGLglfffskATKSLRRICAIVSIISLSIAMFISFSiLWQQIRGNPTYQLLWSWIfnKDISLQIGFLI 89
Cdd:PRK12648 5 LLVLLPFLGALLAAL-------LPRNARNAEAWLAGLVALAALVLLAL-LYPAVAAGEVIRAEIEWL--PALGLNLSLRL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 90 DPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRP 169
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 170 SAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHN-LSERfiELIDSNRVnsFLAnmcALLLFL-GPVAKSAQFPLH 247
Cdd:PRK12648 155 DARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVvLAAG--DLIRAHPL--YPP---ALVLILlGAFTKSAQFPFH 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 248 VWLPDAMEGPTPISALIHAATMVAAGIFFVARmfhLFEVLPFT---MNIISWVGGITALLGATIALAQKDLKRGLAYSTM 324
Cdd:PRK12648 228 FWLPHAMAAPTPVSAYLHSATMVKAGVFLLAR---LWPVLAGTeewFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 325 SQLGYMMLALGIGS---YRAALFHLITHAYSKALLFLGSGSVIHSmepiVGyspdkSQNMIFMGGLRKYMPITGTTFLLG 401
Cdd:PRK12648 305 SHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDHE----TG-----TRDMRRLSGLRRLMPITATLAMVA 375
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1732113667 402 TLSLCGIPPLACFWSK----DEILVDSWissafLGWIAWI 437
Cdd:PRK12648 376 AAAMAGVPLLNGFLSKemffAETLDTHL-----LGSLDWL 410
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
73-420 |
6.80e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 251.75 E-value: 6.80e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 73 WSW--IFNKDISLQIGFliDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIF 150
Cdd:MTH00066 64 FHWmnIFNFNINSSFKF--DQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIG 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 151 WELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHnlserFIELIDSNrvnsflaNMCA 230
Cdd:MTH00066 142 WEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQ-----QIFLLNDN-------STLP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 231 LL-LFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIA 309
Cdd:MTH00066 210 LLgLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 310 LAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMIFMGGLRK 389
Cdd:MTH00066 290 LTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQK 361
|
330 340 350
....*....|....*....|....*....|.
gi 1732113667 390 YMPITGTTFLLGTLSLCGIPPLACFWSKDEI 420
Cdd:MTH00066 362 ALPITTSCLTIGSLALTGTPFLAGFFSKDAI 392
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
114-453 |
1.28e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 248.59 E-value: 1.28e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 114 YMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLllgI 193
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 194 LGIYWI---TGSFDIHNLserFIELIDSNrvnsflANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQI---FALSKDFD------LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 271 AAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHA 350
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 351 YSKALLFLGSGSVIHSMepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEI---LVDSWIS 427
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLN 410
|
330 340 350
....*....|....*....|....*....|...
gi 1732113667 428 saflgwiAW------ITAGLTGFYMFRM-YFVT 453
Cdd:MTH00137 411 -------AWaltltlIATSFTAVYSLRVvFFVS 436
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
73-456 |
3.17e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 247.07 E-value: 3.17e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 73 WSWIFNKDISLQIGFLIDpLTSIMLVSVT-SVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFW 151
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLD-YFSMIFIPVAlFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGW 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 152 ELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLllgILGIYWitgsFDIHNLSERF--IELIDSNrvNSFLANMC 229
Cdd:MTH00108 145 EGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGF---ILAMAW----FLLNLNSWDLqqIFMLNPN--NSNLPLMG 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 230 ALLLFLGpvaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIA 309
Cdd:MTH00108 216 LLLAATG---KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 310 LAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMIFMGGLRK 389
Cdd:MTH00108 293 LTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFK 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1732113667 390 YMPITGTTFLLGTLSLCGIPPLACFWSKDEIL-------VDSWissAFLgwIAWITAGLTGFYMFRMYFVTFEG 456
Cdd:MTH00108 365 TLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAW---ALL--ITLIATSLTAAYSTRIIFFALLG 433
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
86-435 |
1.93e-71 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 241.80 E-value: 1.93e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 86 GFLIDPLTSIMLVSVTSVGILVMIYSDSYMS-------HDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCS 158
Cdd:PRK06525 70 GLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 159 YLLIGFWFSrPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSErfieLIDSNRVNSFLANMCALLlflgpv 238
Cdd:PRK06525 150 WALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSG----LHGSLKYLVFLGILFAAW------ 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPftmNIISWVGGITALLGATIA----LAQKD 314
Cdd:PRK06525 219 GKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIP---HVIGYVGAVMAIVTLLYGflmyLPQQD 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 315 LKRGLAYSTMSQLGYMMLALGIGSY------RAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLR 388
Cdd:PRK06525 296 MKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVL 366
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1732113667 389 KYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSW-ISSAFLGWIA 435
Cdd:PRK06525 367 KKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFeLSVEYWILLP 414
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
34-459 |
1.99e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 249.38 E-value: 1.99e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 34 KSLRRICAIVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWIfnKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDS 113
Cdd:TIGR00940 20 PSDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIY 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 114 YMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGI 193
Cdd:TIGR00940 98 YLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 194 LGIYWITGSFDIHNLserfIELIDSNRvNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:TIGR00940 178 ILLGKITGSFSIDAV----IASADAIR-NSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAG 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 274 IFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGS--------------- 338
Cdd:TIGR00940 253 LYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqgddskiyal 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 339 -YRAALFHLITHAYSKALLFLGSGSVIHSmepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:TIGR00940 333 aAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSK 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1732113667 418 DEIL-------------VDSWisSAFLGWIAWITAGLTGFYMFRMYFVTFEGDFR 459
Cdd:TIGR00940 404 EMFFaeaitahlvnpfdTVTL--GYLFPYVATVASVFTFVYSLRFIHGVFFGRPK 456
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
34-461 |
4.01e-71 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 248.69 E-value: 4.01e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 34 KSLRRICAIVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWIFNKDISLQIgfLIDPLTSIMLVSVTSVGILVMIYSDS 113
Cdd:PRK12645 23 KYFKRIHTGWFVLPVPVVLFIYFLSLIPTTMSGNTVMKTLPWIPSLGINFTL--YVDGLSLLFALLITGIGSLVVLYSIY 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 114 YMSHDQGYV-RFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLG 192
Cdd:PRK12645 101 YLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 193 ILGIYWITGSFDIHNLSERFIELIDSNrvnSFLANMcaLLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 272
Cdd:PRK12645 181 FILLYIMTGSFSIREMIANADEIQNSP---LFIPAM--ILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKA 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 273 GIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGS-------------- 338
Cdd:PRK12645 256 GIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhyqgddskiya 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 339 --YRAALFHLITHAYSKALLFLGSGSVIHSmepiVGyspdkSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWS 416
Cdd:PRK12645 336 aaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLS 406
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1732113667 417 KdEILVDSWISSAFLGW------------IAWITAGLTGFYMFRMYFVTFEGDFRGN 461
Cdd:PRK12645 407 K-EMFFESMLNATEANLfsldtwgvlfpvIAWVASVFTFVYSIIFIFKTFFGKYKPE 462
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
60-441 |
1.59e-67 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 240.98 E-value: 1.59e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 60 WQQIRGNPTYQLLWSWIfnKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHD-QGYVRFFAYLSLFTASMLGL 138
Cdd:PRK12644 45 WPAVLAGGAPTEVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 139 VLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFdihNLSErfielIDS 218
Cdd:PRK12644 123 VTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTY---RLSE-----LLA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 219 NRVNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVG 298
Cdd:PRK12644 195 DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLG 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 299 GITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHL---ITHAYSKALLFLGSGSVIHSmepiVGysp 375
Cdd:PRK12644 275 LATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG--- 347
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1732113667 376 dkSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKdEILVDSWISSAFLGWIA-WITAGL 441
Cdd:PRK12644 348 --TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK-EAALEAVLHDGALGPAGpVVLAGI 411
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
74-418 |
1.13e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 233.18 E-value: 1.13e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 74 SWIfnKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWEL 153
Cdd:PRK12649 65 SWL--PSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWEL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 154 VGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNL--SERFIELIDSNRVnsFLANMcaL 231
Cdd:PRK12649 143 TSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqDSELIENIKGHPL--FLITL--I 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 232 LLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALA 311
Cdd:PRK12649 219 LIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFR 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 312 QKDLKRGLAYSTMSQLGYMMLALGIGSYR-------AALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFM 384
Cdd:PRK12649 299 QTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEA---------ATRDIRKL 369
|
330 340 350
....*....|....*....|....*....|....
gi 1732113667 385 GGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKD 418
Cdd:PRK12649 370 GGLRKEMPITFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
42-462 |
1.49e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 222.71 E-value: 1.49e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 42 IVSIISLSIAMFISFSilwqqirgNPTYQLLWSWIFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGY 121
Cdd:MTH00165 13 FLSLILFFLGLYFLLN--------DYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 122 VRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIgFWFSRPSAANACQKAFITNRVGDFGLLLGIlGIYWITG 201
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 202 SFDihnlserFIELIDSNRvNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARmF 281
Cdd:MTH00165 163 SWN-------FIFYLDFMK-NSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-F 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 282 HLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSG 361
Cdd:MTH00165 234 NNLLFSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 362 SVIHSMepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKD---EILVDSWISSaFLGWIAWIT 438
Cdd:MTH00165 314 SIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNF-FIFFLFFFS 384
|
410 420
....*....|....*....|....
gi 1732113667 439 AGLTGFYMFRMYFVTFEGDFRGNS 462
Cdd:MTH00165 385 TGLTVSYSFRLIYYSMSGDFNLKS 408
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
81-470 |
7.52e-63 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 225.40 E-value: 7.52e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 81 ISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYV-RFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSY 159
Cdd:PRK12646 68 LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 160 LLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLserfIELIDSNRVNSFLANMCALLLfLGPVA 239
Cdd:PRK12646 148 LLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEI----LGQADHIKNHGLFIPMIFMFL-LGAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGL 319
Cdd:PRK12646 223 KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 320 AYSTMSQLGYMMLALGIG-----------------SYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMI 382
Cdd:PRK12646 303 AYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIR 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 383 FMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKD----------EILVDSWISSAFLGWIAWITAGLTGFYMFRMYFV 452
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKE 453
|
410
....*....|....*...
gi 1732113667 453 TFEGDFrgNSDKYTDKTI 470
Cdd:PRK12646 454 VFWGKY--DSKVFTKKNI 469
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-706 |
5.83e-59 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 200.15 E-value: 5.83e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 448 RMYFVTFEGDFRGNSDKY--TDKTIFY-KSIWGNlqtlyKRDKVFSNNSYASFSDQTGDSSEIPedFFSspkierRNKYL 524
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYsgKKNSSFYsISLWGK-----EGSKLINKNFRTLLLLTMNNNEKVS--FFS------KKTYR 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 525 NSEKLLNVLSYyegsnnpnkisedaFVSIKREVKNDNILYPKESDNLMLFSLICLAIPTVFIGFIGVSFSHEGIDSDLLS 604
Cdd:pfam01010 68 IDGNVRNMTRP--------------FITITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILS 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 605 DFLAPLIGSSYKD--NSENLVDFLVKSIPSVSIALGGIFISSSIYGPISS-------REMREEIDLQKGFGGYLFNYLSN 675
Cdd:pfam01010 134 KWLTPSINLLHKNsnNSVDWYEFVTNAIFSVSIAYFGIFIASFLYKPVYSsfqnldlINSFVKKGPKRIFLDKIINVIYN 213
|
250 260 270
....*....|....*....|....*....|.
gi 1732113667 676 WSYYRGYIDNLYNVIFIEGTRILSKSICFFD 706
Cdd:pfam01010 214 WSYNRGYIDVFYTTSFTRGIRGLAELTHFFD 244
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
107-463 |
2.08e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 208.16 E-value: 2.08e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 107 VMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFiTNRVGD 186
Cdd:MTH00151 70 VFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGD 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 187 fGLLLGILGIYWITGSFdihnlserfieLIDSNRVNSFLANMCaLLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHA 266
Cdd:MTH00151 149 -VLILLSIALLVLLGHW-----------SILSMWDFKLSGWLG-LLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 267 ATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHL 346
Cdd:MTH00151 216 STLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 347 ITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKD---EILVD 423
Cdd:MTH00151 296 YTHALFKALLFLCAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDlilESSLM 367
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1732113667 424 SWIS--SAFLGWIAwitAGLTGFYMFRMYFVTFEGDFRGNSD 463
Cdd:MTH00151 368 SPTSllMVLLMFVG---VGLTALYSARLSFCLVWGSMKSSSL 406
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-454 |
5.31e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 207.19 E-value: 5.31e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 45 IISLSIAMFISFSILWQQIRGNPTYQLLWSWIFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 125 FAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAAnACQKAFITNRVGDFGLLLGILGIYWItGSFD 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLS-AGMLTALTNRVGDALLILSIAWMLMH-GNWN 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 205 IHNLSERFielidsnrvnSFLANMCALLLfLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLF 284
Cdd:MTH00209 164 IFYLNFNS----------NLGSVISVLIV-LAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 285 EVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVI 364
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 365 HSMEpivgyspdKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL----VDSWISSAFLgwIAWITAG 440
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILesmlESNMPIMTLI--LMFLSTS 382
|
410
....*....|....
gi 1732113667 441 LTGFYMFRMYFVTF 454
Cdd:MTH00209 383 LTAAYSMRLSYFSL 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
28-456 |
3.08e-57 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 204.18 E-value: 3.08e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 28 FFSKATKSLRRICA-IVSIISLSIAMFISFSILWQQIR----GNPTYQLLWSwIFNKDISLQIGFLIDPLTSIMLVSVTS 102
Cdd:PRK08376 23 IVSLLGGKAREIWAvLISFLTLIVALLVFYEVWNNGTIvyvlGAESPTLTLP-FGSGGFPIRIIWEVDLFGAFMALIATI 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 103 VGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITN 182
Cdd:PRK08376 102 VSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 183 RVGDFGLLLGILGIYWITGSFDIHNLSERFIElidsnrvNSFLANMCALLLFLGPVA-KSAQFPLHVWLPDAM-EGPTPI 260
Cdd:PRK08376 182 SLASSMVLLGIALLYGQYGTLNMAYLAVKMSE-------NPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAYpAAPSSI 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 261 SALIHAATmvAAGIFFVARM-FHLFEVlPFTMNIISWV----GGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALG 335
Cdd:PRK08376 255 SAMLLVIK--QAGLYALARVlFSIYGP-AINLATVGWViiilGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLG 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 336 IG---------------SYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTTFLL 400
Cdd:PRK08376 332 VGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGLARTMPKTTIAFLI 402
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1732113667 401 GTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEG 456
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
29-449 |
6.78e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 204.23 E-value: 6.78e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 29 FSKATKSLRRICAIVSIISLSIaMFISFSILWQqirgnptyqllWS--WIFNKDISLQIgfLIDPLTSIMLVSVTSVGIL 106
Cdd:MTH00207 7 SSIASYLLWFMSILMFPLSLYL-MMCNKTILIE-----------WEifTISSSPINFTI--ILDPTGTLFSSTVLFISAN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 107 VMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIgFWFSRPSAANACQKAFITNRVGD 186
Cdd:MTH00207 73 VLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 187 FGLLLGIlGIYWITGSFDIHNLSErfielidsnrvnSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHA 266
Cdd:MTH00207 152 VMLLLSI-GWTLNQGHWSITNMWQ------------TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHS 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 267 ATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHL 346
Cdd:MTH00207 219 STLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHL 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 347 ITHAYSKALLFLGSGSVIHSMEpivgyspdKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWI 426
Cdd:MTH00207 299 ITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLF 370
|
410 420
....*....|....*....|....*
gi 1732113667 427 S--SAFLGWIAWITAGLTGFYMFRM 449
Cdd:MTH00207 371 YphNSLMILMIFLATALTAAYSTRF 395
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
15-467 |
2.23e-56 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 200.69 E-value: 2.23e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 15 PFVAsmsvGLGLFFF-SKATKSLRRICAIVSIISL--SIAMFISFSilwqqiRGNPTYQLL--WSWIFNKDISLQIGflI 89
Cdd:COG1008 13 PLLG----ALLLLLLpRRNARLARWVALAVSLLTLllSLYLLAGFD------PGTGGFQFVesYPWIPSLGISYHLG--V 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 90 DPLTSIMLVSVTSVGILVMIYSDSYMSHDQGyvRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFS-- 167
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGer 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 168 RPSAANacqKAFITNRVGDFGLLLGILGIYWITG--SFDIHNLSERFIELidsnrvnsFLANMCALLLFLGPVAKSAQFP 245
Cdd:COG1008 159 RIYAAI---KFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAAAPLPL--------TAQLLLFLAFFIAFAVKVPMFP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 246 LHVWLPDA-MEGPTPISAlIHAATMVAAGIFFVARMfhLFEVLP----FTMNIISWVGGITALLGATIALAQKDLKRGLA 320
Cdd:COG1008 228 FHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRF--ALPLFPeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 321 YSTMSQLGYMMLALGIG---SYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTT 397
Cdd:COG1008 305 YSSVSHMGFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAAL 375
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 398 FLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEGDFRGNSDKYTD 467
Cdd:COG1008 376 FLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPD 445
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
28-456 |
3.39e-56 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 200.97 E-value: 3.39e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 28 FFSKATKSLRRICAIVSIISLSIAMFISFSILWQQIR-GNPTYQLLWSWIFNKDISLQIgfliDPLTSIMLVSVTSVGIL 106
Cdd:PRK12667 22 LLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSsNKPIVYLFGGWPAPIGIVYEV----DLLGALLGLLTALVMFL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 107 VMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGD 186
Cdd:PRK12667 98 ILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGT 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 187 FGLLLGILGIYWITGSFDIHNLSERFIELIDSNRVNS----FLANMCALLLFLGPVA-KSAQFPLHVWLPDAM-EGPTPI 260
Cdd:PRK12667 178 TLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLagnpPLALGVALALALWAFTiKAAIFPNHFWLPDAHpAAPSPV 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 261 SALIhAATMVAAGIFFVARMFHL-FEVLPFTMNIISWV-------GGITALLGATIALAQKDLKRGLAYSTMSQLGYMML 332
Cdd:PRK12667 258 SAML-SGLVVNVGAYAIIRFLYTiFGISPSLIDFRAALspiliilGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFM 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 333 ALGIGS---YRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIP 409
Cdd:PRK12667 337 GIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLIGALSLVGIP 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1732113667 410 PLACFWSKdEILVDSWISSAF--LGWIAWITAGLTGFYMFRMYFVTFEG 456
Cdd:PRK12667 408 PLNGFFSK-LLLFNALLESGFylPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
81-447 |
7.05e-55 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 204.12 E-value: 7.05e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 81 ISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYL 160
Cdd:PRK12650 69 VDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 161 LIGFwfSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSfdiHNLSErfIELIDSNRVNSFLANMCALLLFLGPVAK 240
Cdd:PRK12650 149 LIAR--SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSG--ILHSDVWAEKPGLTTVVAVLIAVAAFTK 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLA 320
Cdd:PRK12650 222 SAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 321 YSTMSQLGYMMLALGIGS---YRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTT 397
Cdd:PRK12650 302 YSTVSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQA---------GTRDIRRLGSLWRRMPFTFVS 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1732113667 398 FLLGTLSLCGIPPLACFWSKDEILVDSWIS--SAFLGWIAWITAGLTGFYMF 447
Cdd:PRK12650 373 VTIAALSMAAVPPLFGFVSKEGMLTAFLEApgGNAGVVLLLVGAALGAVFTF 424
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
37-417 |
2.07e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 189.71 E-value: 2.07e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 37 RRICAIVSIISLSIAMFISFSILWQQIRGNP-TYQLlwswiFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYM 115
Cdd:PRK08375 27 RRLRWALALLVAALTFALAISLLPQVLDGGViAYVV-----GGWPPGIGIELRADSLSALFLLVTSILAIAALLYAIGYG 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 116 SHDQgyVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFwFSRPSAANACQKAFITNRVGDFGLLLGILG 195
Cdd:PRK08375 102 EHRQ--TRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 196 IYWITGSFDIHNLSERFIElidSNRVNSFLAnmcalLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 275
Cdd:PRK08375 179 LYGVTGTLNMADLAGALAE---NPTVVTAFG-----FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVY 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 276 FVAR-MFHLFEVLPFT----MNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYR---AALFHLI 347
Cdd:PRK08375 251 ALIRiYFTVFGGDFRFalglGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLalaAGLLHLL 330
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 348 THAYSKALLFLGSGSVihsmepivgYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK08375 331 HHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSK 391
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
87-460 |
7.43e-49 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 183.17 E-value: 7.43e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 87 FLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGY--VRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGF 164
Cdd:PRK06521 76 LRLDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 165 WFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERfielidsnRVNSFLANMCALLLFLGPVAKSAQF 244
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAA--------HLSPFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 245 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFFVARMfhLFEVLPftmNIISW-------VGGITALLGATIALAQKDLK 316
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRV--VFDLLG---APGWWwgvlvlaLGAISAVLGVLYALAEHDLK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 317 RGLAYSTMSQLGYMMLALGIG--------------SYRAALFHLITHAYSKALLFLGSGSVIHSMEpivgyspdkSQNMI 382
Cdd:PRK06521 302 RLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDME 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 383 FMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKdEILVDSWISSAFLG-W------------IAwITAGLTGFYMFRM 449
Cdd:PRK06521 373 KLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE-WLLLQSLLSSPGLPqWglklavpiaaamLA-LTAALAAMCFVKF 450
|
410
....*....|.
gi 1732113667 450 YFVTFEGDFRG 460
Cdd:PRK06521 451 YGITFLGRPRS 461
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
1.80e-41 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 159.09 E-value: 1.80e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 10 IVPVCPFVASMSVGLGLFFFSKATKSLRRICAIVSIISLSIAMFisfsilwqqirGNPTYQLLWSWIFNKDISLqigfli 89
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALL-----------GLVLFATGAAWPAAAWLEV------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 90 DPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 170 SAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFielidSNRVNSFLANMCALLLFLGPVAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHL-----AAQGASPSLQAAALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 250 LPDAMEGPTPISALIHAAtMVAAGIFFVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|....*
gi 1732113667 330 MMLALGIGSYRAALFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
34-451 |
2.39e-40 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 154.89 E-value: 2.39e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 34 KSLRRICAIVSIISLSIAMFISFSilwqQIRGNPTYqllwswIFNKdislqiGFLIDPLTSIMLVSVTSVGILVMIYSDS 113
Cdd:COG1007 29 RRSRRLLAGLALLGLLLALALLLL----ALGGGTGT------AFGG------MFVVDGFALFFKLLILLAALLVLLLSRD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 114 YMSHDQGYVRFFAYLSLF-TASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITnrvGDFG---L 189
Cdd:COG1007 93 YLERRGLLRGEFYALLLFaTLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLL---GALSsgfL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 190 LLGILGIYWITGSFDIHNLSERfielIDSNRVNSFLAnMCALLLFLGPVA-KSAQFPLHVWLPDAMEG-PTPISALIHAA 267
Cdd:COG1007 170 LYGISLLYGATGSLNLAGIAAA----LAAGGANSPLL-LLGLVLVLAGLAfKLSAVPFHMWTPDVYEGaPTPVTAFLATA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 268 TMVAAgIFFVARMFH-LFEVLPFTM-NIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGS---YRAA 342
Cdd:COG1007 245 PKIAA-FAALLRLLVeAFPGLAADWqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTplgVSAA 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 343 LFHLITHAYSKALLFLgsgsVIHSMEpivgYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILV 422
Cdd:COG1007 324 LFYLLAYLFMNLGAFA----VILLLS----RKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFS 395
|
410 420 430
....*....|....*....|....*....|....*.
gi 1732113667 423 DSWisSAFLGW---IAWITAGLTGFYMFR----MYF 451
Cdd:COG1007 396 AAV--EAGLYWlavIAVLNSVISAYYYLRvvkaMYF 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
26-456 |
2.07e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 152.40 E-value: 2.07e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 26 LFFFSKATKSLRRICAIVSIISLSIAMFIsfsiLWQQIRGNPTYQLL--WSWIFNKDISLQIGflIDPLtSIMLVSVTSV 103
Cdd:TIGR01972 16 LLLPSNKDGKARWIALVVALATLLLSLLL----LFQFDPTGSGFQFTedIPWIPALGISYHLG--VDGI-SLLLVLLTAL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 104 GILVMIYSdSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWfSRPSAANACQKAFITNR 183
Cdd:TIGR01972 89 LTLLAILA-SWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFLYTL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 184 VGDFGLLLGILGIYWITG-SFDIHNLserfIELIDSNRVNSFLanmcALLLFLGPVAKSAQFPLHVWLPDAM-EGPTPIS 261
Cdd:TIGR01972 167 AGSLLMLLAILGLYFLGGgTFDLLEL----LNLPLPFGVQTWL----FLAFFIAFAVKVPLFPLHTWLPDAHvEAPTAGS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 262 ALIHAATMVAAGIFFVARMFHLF-EVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYR 340
Cdd:TIGR01972 239 VILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNEL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 341 A---ALFHLITHAYSKALLFLGSGSVihsmepivgYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:TIGR01972 319 GisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
410 420 430
....*....|....*....|....*....|....*....
gi 1732113667 418 DEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEG 456
Cdd:TIGR01972 390 FLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
23-417 |
5.46e-39 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 153.23 E-value: 5.46e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 23 GLGLFFFSKATKSlrrICAIVSIISLSIAMFISFSILwqqirgNPTYQLLWSWIFNKDISLQIGFLIDPLTSIMLVsvts 102
Cdd:PRK08668 14 SVLAYLLKKINEK---IGVIGNALPLLFLIKLYFTLK------VGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLL---- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 103 VGILVMIYSDSYMSHDQGYVRFFAYLSLftASMLGLVLSPNLVQIYIFWELVGMCSYLLI--GFWFSRpsaaNACQKAFI 180
Cdd:PRK08668 81 VIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMVpmGKKESR----KASLKYFV 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 181 TNRVGDFGLLLGILGIYWITGSFDIHNLSERFIelidsNRVNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAM-EGPTP 259
Cdd:PRK08668 155 LSAIGAYAMLYAIFLIYAKTGTFDFADISQGLI-----NDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 260 ISA-----LIHAATMVAAGIFFVARMFHLFEVLPFTMN------IISWVGGITALLGATIALAQKDLKRGLAYSTMSQLG 328
Cdd:PRK08668 230 FSAvlsgqLSKLGAYGFLLVLYVLPGTKLFSEFGTYRGvplfnyILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 329 YMMLALGIG---SYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTTFLLGTLSL 405
Cdd:PRK08668 310 YILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISL 380
|
410
....*....|..
gi 1732113667 406 CGIPPLACFWSK 417
Cdd:PRK08668 381 AGIPPMSGFASK 392
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-437 |
1.07e-37 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 147.77 E-value: 1.07e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 10 IVPVCPFVASMsvglgLFFFSKATKSLRRICAIVSIISLSIAMFisfsiLWQQIRGNPTYQLLWSWifnkdislqigFLI 89
Cdd:PRK06458 9 LLLLIPLLASL-----LLFALRKRRLVATLNVLGITLTLILALW-----LVFTVPDAGEIFAAGLW-----------FFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 90 DPLTSIMLVSVTSVGILVMIYSDSYMSHDQ-------GYVRF-FAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLL 161
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLyYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 162 IGFWFSRpSAANACQKAFITNRVGDFGLLLGILGIYW----ITGSFDIHNLserFIELIDSN-RVNSFLANMCALLLFLG 236
Cdd:PRK06458 148 VGIYRTR-ASLEAAWKYIIICSVGVAFALFGTILVYAnaatVMGDGEMAIL---WTELLKHAsLLDPTLMKLAFVFLLIG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 237 PVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAgIFFVARMFHLFEVLP---FTMNIISWVGGITALLGATIALAQ 312
Cdd:PRK06458 224 FGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIgsdFPGRLLLIFGLLSVLVAAFFLLRQ 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 313 KDLKRGLAYSTMSQLGYMMLALGIGS---YRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRK 389
Cdd:PRK06458 303 RDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTRDINVIRGLLK 373
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1732113667 390 YMPITGTTFLLGTLSLCGIPPLACFWSkdEILVDSWISSAFLGWIAWI 437
Cdd:PRK06458 374 VSPLTGWGLMLGALAIAGMPPFGVFIS--EFLILTAGLARGPLLIAIL 419
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-436 |
7.62e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 144.71 E-value: 7.62e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 22 VGLGLFFFSKATKSLRRICAIVSIISlsiamfiSFSILWQQIRGnpTYQLLwswifnkdISLQIGFLIDPLTSIMLVSVT 101
Cdd:PRK07234 15 LGFAIYLLPKLDRNLALGMAIVSAVY-------ALGLVASMVPL--ELTLL--------DNFGVTLRADALSGYFILTNA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 102 SVGILVMIYSdsyMSHDQgyVRFFAYLSLFTASMLGLV-LSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFI 180
Cdd:PRK07234 78 LVTLAVIFYC---WESAK--TRFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 181 TNRVGDFgLLLGILGIYWITGSFDIHNLSErfielidsnrvnsflANMCAL-LLFLGPVAKSAQFPLHVWLPDAMEGPTP 259
Cdd:PRK07234 153 SNVAMLF-YLIGAVLVYQANGTFAFSGLAT---------------ADPEAFaLIALGLLVKGGIFVSGLWLPLTHSEAEP 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 260 ISALIHAATMVAAGIFFVARMFHLFEVLpftMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGsy 339
Cdd:PRK07234 217 PVSALLSGVVVKAGVFPLVRCALDVPGL---DLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG-- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 340 raALFHLiTHAYSKALLFLGSGsVIHSMEpivgYSPDKSQnmifMGGLRKYMPITgttflLGTLSLCGIPPLACFWSKDE 419
Cdd:PRK07234 292 --GLYAL-AHGLVKSTLFLCAG-ALPSRN----FTELISQ----MLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVL 354
|
410
....*....|....*..
gi 1732113667 420 ILvdswisSAFLGWIAW 436
Cdd:PRK07234 355 TL------KNLLPWQAI 365
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-421 |
1.21e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 144.57 E-value: 1.21e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 75 WIFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHD--QGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWE 152
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 153 LVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHnlserfielidSNRVNSFLANMCALL 232
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFV-----------SGGLFSKNQSIILLL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 233 LFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARM-FHLFEVLPFTM-----NIISWVGGITALLGA 306
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIlLYIFGLSYLQRifaefNWLIFIPIVSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 307 TIALAQKDLKRGLAYSTMSQLGYMMLALGI---GSYRAALFHLITHAYSKALLFLGSGSVihsmepivgYSPDKSQNMIF 383
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDK 366
|
330 340 350
....*....|....*....|....*....|....*...
gi 1732113667 384 MGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLIL 404
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
87-451 |
2.24e-36 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 143.42 E-value: 2.24e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 87 FLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVrfFAYLSLF-TASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFW 165
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLEDRGRGE--FYLLVLFaLLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 166 FSRPSAANACQKAFItnrVGDFG---LLLGILGIYWITGSFDIHNLSERFIELIDSNRVNSF-LANMCALLLFlgpvaKS 241
Cdd:PRK05777 147 RDRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFgLVFLLVGLAF-----KL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 242 AQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFFVARMFHL-FEVLPFTMNIISWVGGI-TALLGATIALAQKDLKRG 318
Cdd:PRK05777 219 SAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVaFGGLSEDWQQVLAIIAIaSMLVGNLAALSQTNIKRL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 319 LAYSTMSQLGYMMLALGIGS---YRAALFHLITHAYSKallfLGSGSVIHSMEpivgySPDKSQNMIF-MGGLRKYMPIT 394
Cdd:PRK05777 298 LAYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLR-----RKGGEAESISdFAGLSKRSPLL 368
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1732113667 395 GTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAF-LGWIAWITAGLTGFYMFR----MYF 451
Cdd:PRK05777 369 AAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWwLAVIGVLNSAIGAFYYLRviklMYF 430
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
52-454 |
5.34e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 143.13 E-value: 5.34e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 52 MFISFSILWQQIRGNPTYQLLWSWIFNKDISLQIGFLIDPLtsIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLF 131
Cdd:MTH00095 8 ILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 132 TASMLGLVLSPNLVQIYIFWELVGMCSYLLIGF---WFSRPSAANAcqkaFITNRVGDFGLLLGILGIYWITGSFdihnL 208
Cdd:MTH00095 86 VGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFynnWDSNSGAMNT----ALTNRIGDFFIFLFFSGFIFSSYYF----F 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 209 SErfielidsnrvnSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLP 288
Cdd:MTH00095 158 SF------------SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMN 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 289 FtMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMe 368
Cdd:MTH00095 226 V-MKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN- 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 369 pivgYSPDKSQNMIFMGGLRKYMPItgtTFLLGTLSLCGIPPLACFWSKDEILVDSWISSA--FLGWIAWITAGLTGFYM 446
Cdd:MTH00095 304 ----FGQQDGRNYSNNGNLPMFIQL---QLLVTLFCLCGLMFTSGMVSKELILELFFFNNYmiFFSLMFFFSVFLTFGYS 376
|
....*...
gi 1732113667 447 FRMYFVTF 454
Cdd:MTH00095 377 YRLWKSFF 384
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
15-467 |
2.08e-35 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 141.11 E-value: 2.08e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 15 PFVASMsvgLGLFFFSKATKSLRRICAIVSIISL--SIAMFISFSilwqqiRGNPTYQLLW--SWIFNKDISLQIGflID 90
Cdd:PRK05846 13 PLIGGL---LVLLTERFGARLARWIALIGTLLTLllSLVLWIGFD------SSNAGFQFVEkhPWIPRFGISYHLG--VD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 91 PLTSIMLVSVTSVGILVMIYSdsyMSHDQGYVRFFAYLSLFTAS-MLGLVLSPNLVQIYIFWE--LVGMcsYLLIGFW-- 165
Cdd:PRK05846 82 GISLLLVVLTALLTPLAVLAS---WEEIKKRVKFYMAALLWLEGgVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWgg 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 166 FSRPSAANacqKAFITNRVGDFGLLLGILGIYWI----TGSFDIHNLSErfielidsNRVNSFLANMCALLLFLGPVAKS 241
Cdd:PRK05846 157 KNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLN--------LPLPPGVQYWLFLAFFIAFAVKM 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-FVARMFHLF-----EVLPftmnIISWVGGITALLGATIALAQKDL 315
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFpdashEFAP----IIITLGVIAIIYGALVALAQTDI 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 316 KRGLAYSTMSQLGYMMLALGIGSYRA---ALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMP 392
Cdd:PRK05846 302 KKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMP 372
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1732113667 393 ITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEGDFRGNSDKYTD 467
Cdd:PRK05846 373 VLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKD 447
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
17-432 |
3.07e-35 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 140.29 E-value: 3.07e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 17 VASMSVGLGLF--FFSKATKSLRR-----ICAIVSIISLSIAMFISFSILwqqIRGNPTYQLLWSWIFNKDISLQIGfli 89
Cdd:PRK08377 4 YASLLIALPLIsaFFVPVIKGIGKsavryYLILITLLQTGIAGWVFMEVY---TTGKPIIIMAGGWKPPVGINLYIG--- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 90 dPLTSIMLVSVTSVGILVMIYSDSYMSHDQgyvrFFAYLSLFTASMLG---LVLSPNLVQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK08377 78 -PFAALFVLIIAIVSFIMSIFSLKAVEVEP----IDKYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 167 SRpSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERfielidSNRVNSFLANMCALLLFLGPVAKSAQFPL 246
Cdd:PRK08377 153 TG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQL------AGTIDPTVAQVGLALLIFGLAVEAELFPL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 247 HVWLPDAMEG-PTPISALIhAATMVAAGIFFVARMFHLFEVLPFTMNIISWV---GGITALLGATIALAQKDLKRGLAYS 322
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 323 TMSQLGYMMLALGIGS---YRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTTFL 399
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
410 420 430
....*....|....*....|....*....|....*....
gi 1732113667 400 LGTLSLCGIPPLACFWSKDEILVD------SWISSAFLG 432
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILAglsagyTWPVALVLG 414
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
24-417 |
7.65e-35 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 141.41 E-value: 7.65e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 24 LGLFFFSKATKSLRRICAIVSIISLSIamfisFSILWQQIRGNPTYQLLWSWIfnkdISLQIGFLIDPLTSIMLVSVTSV 103
Cdd:PRK08667 19 IPLVFRHKRKRVWQSVLWLVIAIALLL-----FAGSLQLFTGNPLDIPLWGIA----PGLDITFHIDRLAAFFIILIGLV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 104 GILVMIYSDSYMSHDQGYVR---FFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFI 180
Cdd:PRK08667 90 SLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 181 TNRVGDFGLLLGILGIYWITGSFDIHNLSerfielidsnrVNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEG-PTP 259
Cdd:PRK08667 170 MTQLSTVFLMLGIIVLFIQTGSFELSPLG-----------ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSN 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 260 ISALIhAATMVAAGIFFVARMfhlfeVLPFTMNIISW------VGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLa 333
Cdd:PRK08667 239 VSALM-SGVMLKVAVYGLVRF-----LMDVLSPELWWgvlillAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILM- 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 334 lGIGSY----------------RAALFHLITHAYSKALLFLGSGSVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTT 397
Cdd:PRK08667 312 -GIGLYvifgvygldtlallalGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSAL 381
|
410 420
....*....|....*....|
gi 1732113667 398 FLLGTLSLCGIPPLACFWSK 417
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASE 401
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-460 |
4.01e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 137.00 E-value: 4.01e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 13 VCPFVASMSVGLGLFFFSKATKSLRRICAIVSIISLSIAMfisfsILWQQIRGNPTYQL-LWSWifnkDISLQIGFLIDP 91
Cdd:PRK07691 7 ILPILIPVITAILLIFLGKRPIIQRYVALIGSLLTLVAAI-----ILVANVYKHGIQTLeLGNW----KAPFGIVFVADM 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 92 LTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSA 171
Cdd:PRK07691 78 FAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 172 ANACqKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELIDSNrvnSFLANMCALLLFLGPVAKSAQFPLHVWLP 251
Cdd:PRK07691 158 RESI-KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQ---TGLITVVAILFLFVFATKAGLFPLYFWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 252 DAMEGP-TPISALIhAATMVAAGIFFVARMFHLF--EVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLG 328
Cdd:PRK07691 234 GSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFfsHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 329 YMMLALGIG---SYRAALFHLITHAYSKALLFLGSGSVIHsmepIVGYSPDKSqnmifMGGLRKYMPITGTTFLLGTLSL 405
Cdd:PRK07691 313 VILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1732113667 406 CGIPPLACFWSKDEILVDSWISSAFL-GWIAWITAGLTGFYMFRMYFVTFEGDFRG 460
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEGTFEAGFYVsGIIVLLSSLLVLYSVIKIFLKGFWGEPKG 439
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
6-457 |
1.34e-33 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 135.46 E-value: 1.34e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 6 KNIWIVPVC-PFVasmsVGLGLFFFskatKSLRRICAIVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWI--FNkdis 82
Cdd:PRK12663 3 SNLLILPMLlPLL----CGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGWLppFG---- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 83 lqIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLI 162
Cdd:PRK12663 71 --IQFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLI 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 163 GFWFSRPSAANACQKAFItNRVGDFGLLLGILGIYWITGSFDIHNLSERfielIDSNRVNSFLAnMCALLLFLGPVAKSA 242
Cdd:PRK12663 149 TLGQEREQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMR----LNDMGDTATLT-TIALLFLLAFGMKAA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 243 QFPLHvWLPDAMEGP-TPISALIhAATMVAAGIFFVARMF-HLFEVLP-FTMNIISWVGGITALLGATIALAQKDLKRGL 319
Cdd:PRK12663 223 LFPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFtLLFPQEReLLHPLLATMAAITMVIGALGALAYKDIRRIA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 320 AYSTMSQLGYMMLALGIGSYRA---ALFHLITHAYSKALLFLGSGSVIHsmepIVGYSPDKSqnmifMGGLRKYMPITGT 396
Cdd:PRK12663 301 GYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGA 371
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1732113667 397 TFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAG-LTGFYMFRMYFVTFEGD 457
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSlITMYSLFRIFFLAYWGD 433
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
67-442 |
4.80e-33 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 135.02 E-value: 4.80e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 67 PTYQLLWSWIFNKDISLQIGFL--------IDPLTSIMLVSVTSVGILVMIYSdsymSHDQGYVRFFAYLsLFTASMLGL 138
Cdd:PRK12668 35 PVLAVLAVLTVPEGTYLTVTFLgfdlvlgrVDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAAL-LYVGSALGA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 139 VLSPNLVQIYIFWELVGMCSYLLIgfWFSR-PSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSErfielid 217
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAG------- 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 218 snrvnsfLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLpftmniiSWV 297
Cdd:PRK12668 181 -------LGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL-------IYI 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 298 GGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRA---ALFHLITHAYSKALLFLGSGSVIHSmepiVGYS 374
Cdd:PRK12668 247 GAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE 322
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1732113667 375 pdksqNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIlvdswISSAFLGWIAWITAGLT 442
Cdd:PRK12668 323 -----KLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMI-----ISAAGEDHYVWVWLLLL 380
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
37-449 |
5.44e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 124.46 E-value: 5.44e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 37 RRICAIVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWIFNKDISLQIgfliDPLTSIMLVSVTSVGILVMIYSdSYMS 116
Cdd:PRK12662 26 RKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELRV----DILSATMLVLVNFIAVMSVLYG-IYPN 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 117 HDQGYV----RFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQkAFITNRVGDFGLLLG 192
Cdd:PRK12662 101 RKEISVnkipSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFE-YLIIGTIGATFYLIG 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 193 ILGIYWITGSFDIHNLSERFIELIDSNRVNsflanMCALLLFLGPVAKSAQFPLHVWLPDAM-EGPTPISALIhAATMVA 271
Cdd:PRK12662 180 IGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 272 AGIFFVARMFH-------LFEVLPFTmNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYR---A 341
Cdd:PRK12662 254 VMIYLIIRIVYdvfkanfVFTTLPFN-NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaA 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 342 ALFHLITHAYSKALLFLGSGSVIHsmepivGYSPDKSQNMIfmgGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK12662 333 AVAYIVNHSIVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
410 420
....*....|....*....|....*....
gi 1732113667 422 VDSWISSAFLGWIAW-ITAGLTGFYMFRM 449
Cdd:PRK12662 404 DAFIKSNAWIGLVVLlVGSGLSVIYVWKI 432
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-451 |
6.16e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 115.05 E-value: 6.16e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 10 IVPVCPFVASMSVGL-GLFFFSKATKSLrricaIVSIISLSIAMFISFSILWqqirgnptyqlLWSWIFNKDISLQIGFL 88
Cdd:TIGR01770 4 ILPEIILLLGAFILLlYGLFYSRKKRNP-----LLLKNLSYIVLLSALVSLF-----------LTLQYAAYLFTGFSFFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 89 IDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLF-TASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFS 167
Cdd:TIGR01770 68 VDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFaLLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRK 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 168 RPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFdihNLSERFIELIDSNRVNSFLaNMCALLLFLGPVAKSAQFPLH 247
Cdd:TIGR01770 148 SRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL---NFEDLLLFLSNGMLNISLL-LLGIVLILVGLLFKLSAVPFH 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 248 VWLPDAMEG-PTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWVGGI-TALLGATIALAQKDLKRGLAYSTMS 325
Cdd:TIGR01770 224 MWVPDVYEGaPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFlSMLIGNFGALAQKKVKRLLAYSSIS 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 326 QLGYMMLALGIGS---YRAALFHLITHAYSKALLFlgsgSVIHSMEPIVGYSPDksqNMIFMGGLRKYMPITGTTFLLGT 402
Cdd:TIGR01770 304 HVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRSYKDEWIE---YISDFAGLFKTNPILAILILIFM 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1732113667 403 LSLCGIPPLACFWSKDEILVDSWISSAF-LGWIAWITAGLTGFYMFR----MYF 451
Cdd:TIGR01770 377 FSLAGIPPLAGFFGKFYVFFALLKSGLYwLAVIAVLTSVIGAFYYLRvvkvMYF 430
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
87-387 |
4.60e-26 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 112.82 E-value: 4.60e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 87 FLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIG--- 163
Cdd:PRK08601 68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 164 FWFSRPSAANACQKAFItnrVGDFGLLLGILGIYWITGSFDIhnlserfieliDSNRVNSFLANMCA-------LLLFLG 236
Cdd:PRK08601 148 GWKVAREAAKISGMLFL---ISWLALALAIVWLFIATGEWQL-----------TSVLSNENLAQLGTwektginLLLILA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 237 PVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFFVARMFHLF--EVLPFTMNIISWvggITALLGATIALAQKD 314
Cdd:PRK08601 214 VMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFhdDIAQILLLIFAS---ISVLIGTGISLVQVD 289
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1732113667 315 LKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMIFMGGL 387
Cdd:PRK08601 290 YKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
42-417 |
5.25e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 106.89 E-value: 5.25e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 42 IVSIISLSIAMFISFSILwqqirGNPTYQLLWSWIFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGY 121
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFL-----VGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYAS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 122 VRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAanacQKAFIT---NRVGDFGLLLgILGIYW 198
Cdd:MTH00063 76 FLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSL----RASVVTlvsSRFGDVCLFL-LIGLSC 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 199 ITGSFDIhnlserfielidsnrvnsflanMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVA 278
Cdd:MTH00063 151 WGGSGSF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVM 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 279 RmFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFL 358
Cdd:MTH00063 209 R-YDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFM 287
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1732113667 359 GSGSVihsmepIVGYSPDKSQNMIFMGGLRKYMPITGTTFLLgtLSLCGIPPLACFWSK 417
Cdd:MTH00063 288 LVGDV------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSK 338
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-449 |
5.29e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 106.32 E-value: 5.29e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 38 RICAIVSIISLSIAMFISFSILWQQIRGNPTYQLLWS--WIFNKDISLQIGflIDPLtSIMLVSVTSVGILVMIYSDSYM 115
Cdd:PRK06473 26 KLARSVALVIASVLLLLSLVLAFQFDPGNPNQQFTEFipWIDSLGLSYHLG--VDGL-SLPLLVLNSLLTLIAIYSSDES 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 116 SHDQGYvrFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWfSRPSAANACQKAFITNRVGDFGLLLGILG 195
Cdd:PRK06473 103 IQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLG 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 196 IYWITG--SFDIHNLserfieLIDSNRVNSFLANMCALLLFLGpvAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAA 272
Cdd:PRK06473 180 LVWLSGasSFDYEPL------RSHTLPLSTQLLLLAPILVGFG--IKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 273 GIFFVAR--MFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIG---SYRAALFHLI 347
Cdd:PRK06473 251 GTYGLLRfgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMI 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 348 THAYSKALLFLGSGSVihsmepivgYSPDKSQNMIFMGGL---RKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDS 424
Cdd:PRK06473 331 SHGLISALLFLLVGVV---------YKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGS 401
|
410 420
....*....|....*....|....*
gi 1732113667 425 WISSAFLGWIAWITAGLTGFYMFRM 449
Cdd:PRK06473 402 FPIFPVQTLLCMIGTGLTAVYFLLL 426
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
42-437 |
1.66e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 105.05 E-value: 1.66e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 42 IVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWIFNKDISLqigfLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGY 121
Cdd:PRK12665 31 AISLLALSAVLVLSAVLLYLVDRDGTQAVQLGGWDAPIGITL----VVDRLSALMLVVSSVVLLAVLVYAIGQGIRDGDE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 122 VrffAYLSLFTASMLGLV-------LSPNLVQIYIFWELVGMCSYLLIGFWFSrPSAANACQKAFITNRVGDFGLLLGIL 194
Cdd:PRK12665 107 E---QPVSIFLPTYLILVagvsnafLAGDLFNLYVGFEILLVASYVLLTLGAT-AARVRAGVTYVMVSMVSSLLFLIGIA 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 195 GIYWITGSFDIHNLSERFIELIDSNRVNSFlanmcALLLflgpVA---KSAQFPLHVWLPDAM-EGPTPISAlIHAATMV 270
Cdd:PRK12665 183 LVYAATGTLNMADLAVRLDELPSGTRTALF-----AVLL----VAfgiKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLT 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 271 AAGIFFVARMfhlfEVLPFTM----NIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGS---YRAAL 343
Cdd:PRK12665 253 KVGVYAIIRT----HTLLFPGggldTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAI 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 344 FHLITHAYSKALLFLGSGSVihsmEPIVGyspdkSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKdEILVD 423
Cdd:PRK12665 329 YYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK-VALLE 398
|
410
....*....|....
gi 1732113667 424 SWISSAflGWIAWI 437
Cdd:PRK12665 399 AGAEDG--TWLAWA 410
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
24-445 |
4.54e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 103.64 E-value: 4.54e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 24 LGLFFFSKATKSLRRICAIVSIISLSIAMFIsfsiLWQQIRGNPTYQLLWSWIFNKDISLQIGFLIDPLtSIMLVSVTSV 103
Cdd:PRK07363 16 IGFFPGNLPSARLRQITLVFAVLVLAWSLFL----LTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL-SLPLLVLNSL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 104 GILVMIYSDSYMSHDQGYvrFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAAnACQKAFITNR 183
Cdd:PRK07363 91 LTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGY-ASIKFLIYTA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 184 VGDFGLLLGILGIYWITGS--FDIHNLSERFIELidsnrvNSFLANMCALLLFLGpvAKSAQFPLHVWLPDAMEGPTPIS 261
Cdd:PRK07363 168 VSGLLVLAAFLGIVWLSGStsFDYDAISTQNLSL------NTQLILLTGLLLGFG--IKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 262 ALIHAATMVAAGIFFVARmFHLfEVLPFTMNIIS----WVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIG 337
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLR-FGL-QLFPQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 338 ---SYRAALFHLITHAYSKALLFLGSGSVihsmEPIVGyspdkSQNMIFMGGLR---KYMPITGTTFLLGTLSLCGIPPL 411
Cdd:PRK07363 318 tqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPGL 388
|
410 420 430
....*....|....*....|....*....|....
gi 1732113667 412 ACFWSKDEILVDSWISSAFLGWIAWITAGLTGFY 445
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
16-446 |
7.39e-23 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 102.91 E-value: 7.39e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 16 FVASMSVGLGLFFFSKATKSLRRICAIVSIISLSIAMFISFSILWQQIRGNPTYqllwswifnkdislqigFLIDPLtSI 95
Cdd:PRK08676 5 YLLVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRY-----------------LFIDHL-GI 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 96 MLVSVTSVG-ILVMIYSDSYMSH-------DQGYVR-FFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK08676 67 FVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILS 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 167 SRPSAANACQKAFITNRVGDFGLLlGILGIYWIT------GSFDIHNLSERFIELidsnrvNSFLANMCALLLFLGPVAK 240
Cdd:PRK08676 147 ARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTELAAHASLL------SPSVLGASFLFIFIGFLAK 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 241 SAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFFVARMFHLF---EVLPFTMNIISWVGGITALLGATIALAQKDLK 316
Cdd:PRK08676 220 SGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLrqsGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLK 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 317 RGLAYSTMSQLGYMMLALGIGSYRA---ALFHLITHAYSKALLFLGSGsVIHSMepivgYSPDKSQNmifMGGLRKYMPI 393
Cdd:PRK08676 299 KLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---IFDVFRLQPV 369
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1732113667 394 TGTTFLLGTLSLCGIPPLACFWSKDEILVDS-----WISSAFLGWIAWITAGLTGFYM 446
Cdd:PRK08676 370 AAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
85-417 |
4.68e-21 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 97.02 E-value: 4.68e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 85 IGFLIDPLTSIMLVSVTSVGILVMIysdSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIgF 164
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLV-I 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 165 WFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIhnlserfielidSNRVNSFLAN-------MCALLLFLGP 237
Cdd:PRK06277 142 ASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNI------------TDIHNALLVNptspviyGGLLLLIFGL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 238 VAKSAQFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFFVaRMFHLFEVLPFTMNIISWVGGITALLGATIALAQK 313
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQT 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 314 DLKRGLAYSTMSQLGYMMLALGIG---SYRAALFHLITHAYSKALLFLGSGSVihsmepivgYSPDKSQNMIFMGGLRKY 390
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPV 359
|
330 340
....*....|....*....|....*..
gi 1732113667 391 MPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 360 MPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-456 |
3.17e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 89.12 E-value: 3.17e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 89 IDPLTSIMLVSVTSVGILVMIYSDSYMSHDQgyVRFFAYL-SLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGfwfs 167
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQ--VKANGLLiNLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG---- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 168 rpsaanaCQKA----FITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELIDSNRVnsFLANMCALLLFLGPVaksaq 243
Cdd:PRK08042 132 -------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDI--WLLGVIGFGLLAGII----- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 244 fPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMNIISWV-GGITALLGATIALAQKDLKRGLAYS 322
Cdd:PRK08042 198 -PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQRLLAYH 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 323 TMSQLGYMMLALGIG--------------SYRAALFHLITHAYSKALLFLGSGSVIHSmepiVGYspdksQNMIFMGGLR 388
Cdd:PRK08042 277 TLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIG 347
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1732113667 389 KYMPITGTTFLLGTLSLCGIPPLACF---WSKDEILVDSWISSAFLGWIAW--------ITAGLTGFYMFRMYFVTFEG 456
Cdd:PRK08042 348 KKMPVISIAMLVGLMAMAALPPLNGFageWVIYQSFFKLSNSGAFVARLLGpllavglaITGALAVMCMAKVYGVTFLG 426
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
123-432 |
1.27e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 83.54 E-value: 1.27e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 123 RFFAYLSLFTASMLGLV-LSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGI-LGIYWIT 200
Cdd:PRK12561 87 RLFYFLMLVLYSAQIGVfLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLaLALSGDT 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 201 GSFDIHNLSERFIELIdsnrvnsfLANMCALLLFLGPVAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFFVAR 279
Cdd:PRK12561 167 FTFDLAELGAKSYPLA--------LELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKMG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 280 MFHLF----EVLP----FTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMlaLGIGSYRA-----ALFHL 346
Cdd:PRK12561 232 GYALIrfnvQMLPdahvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQM 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 347 ITHAYSKALLFLGSGsvihsmepiVGYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSkdEILVdswi 426
Cdd:PRK12561 310 ISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS--ELTV---- 374
|
....*.
gi 1732113667 427 ssaFLG 432
Cdd:PRK12561 375 ---FLG 377
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
37-444 |
3.13e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 82.59 E-value: 3.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 37 RRICAIVSIISLSIAMFISFSILWQQIRGNPTYQLL--WSWIFNkdislqIGFLIDPLTSIMLVSVTSVGILVMIYSdsy 114
Cdd:PRK12666 30 RRLKRAISLASTLLLLAVAVALLASAAAGGIGVYLLgnWPAPFG------IVLVLDRLSALMLLLTALLALAALLYA--- 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 115 MSHDQGYVRFFayLSLFTASMLGL---VLSPNLVQIYIFWELVGMCSY--LLIGfwfSRPSAANACQKAFITNRVGDFGL 189
Cdd:PRK12666 101 LAGWDRAGPHF--HALFQFQLMGLngaFLTGDLFNLFVFFEVLLAASYglLLHG---SGRARVRAGLHYVAINLVASSLF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 190 LLGILGIYWITGSFDIHNLSERFIELIDSNRVnsfLANMCALLLFLGPVAKSAQFPLHVWLPDA-MEGPTPISALIhaAT 268
Cdd:PRK12666 176 LIGVGLIYGVTGTLNMADLAQRIAQLPAADRA---LLEAGAALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AI 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 269 MVAAGIFFVARMFHLF------EVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYR-- 340
Cdd:PRK12666 251 MTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAat 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 341 -AALFHLITHAYSKALLFL----------GSGSVIHSMEPIvgYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIP 409
Cdd:PRK12666 331 aAALYYLVHSTLAAAALFLladlverqrgAAADRLAVTPEL--YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLP 408
|
410 420 430
....*....|....*....|....*....|....*.
gi 1732113667 410 PLACFWSKDEILVDSWISS-AFLGWIAWITAGLTGF 444
Cdd:PRK12666 409 PLSGFLGKFALLQALLNPPgAGAAWWLWALVLLSGL 444
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
71-431 |
7.60e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 81.25 E-value: 7.60e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 71 LLWSWIFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLsLFTASMLGLVLS--PNLVQIY 148
Cdd:PRK02504 58 LALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAI-LLTATLGGMFLSgaTELVMIF 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 149 IFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDihNLSERFIELIDSnrvnSFLANM 228
Cdd:PRK02504 137 ISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITS----PSLGLA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 229 CALLLFLGPVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFFVARmfhlFEVLPFTMNIISWVGGITAL--- 303
Cdd:PRK02504 211 LALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIR----LLVTAFPSFDEQWKLLFTALail 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 304 ---LGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGS---YRAALFHLITH------AYSKALLF-LGSGSvihsmEPI 370
Cdd:PRK02504 286 smvLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT-----DQI 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1732113667 371 VGYSpdksqnmifmgGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFL 431
Cdd:PRK02504 361 SDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYL 410
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
43-448 |
8.05e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 80.82 E-value: 8.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 43 VSIISLSIAMFIsfsilwqqirgnptyqLLWSWIFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYV 122
Cdd:CHL00049 47 ISSTSLVMSITA----------------LLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAI 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 123 RFFaYLSLFTASMLGLVL--SPNLVQIYIFWELVGMCSYLLIGFwfsrpsaanaCQKAFITNRVGDFGLLLG-----IL- 194
Cdd:CHL00049 111 TEF-LLFVLTATLGGMFLcgANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYLLMGgasssILv 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 195 -GIYWITGSFDIH-NLSERFIELIDSNRVNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVA 271
Cdd:CHL00049 180 yGFSWLYGLSGGEiELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 272 AGIFFVaRMFHLfeVLPFTMNIISWVGGITALL----GATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLI 347
Cdd:CHL00049 260 ASALAT-RIFDI--PFYFSSNEWHLLLEILAILsmilGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMI 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 348 THAYSKALLFLGSGSVIHSMEPIVGyspdkSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWIS 427
Cdd:CHL00049 337 TYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQA 411
|
410 420
....*....|....*....|..
gi 1732113667 428 -SAFLGWIAWITAGLTGFYMFR 448
Cdd:CHL00049 412 gLYFLVSIGLLTSVISIYYYLK 433
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-417 |
2.28e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 78.53 E-value: 2.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 134 SMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHnlserFI 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 214 ELIDSNRVN--SFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFFVARMFHLFEvlpft 290
Cdd:MTH00196 80 NLVLNSGQSfsSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGLNV----- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 291 mNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSY---RAALFHLITHAYSKALLFLgsgsvihsm 367
Cdd:MTH00196 153 -NILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1732113667 368 ePIVGYSPDKSQnMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
92-430 |
3.41e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 75.82 E-value: 3.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 92 LTSIMLVsVTSVGILVMIYSDSYMSHDQGYvrfFAYLSLFTA-SMLGLVLSPNLVQIYIFWELVGMCSYLLIGFwfSRPS 170
Cdd:MTH00199 70 ISKIIII-IGSISILLMGSGETILSEGGQS---SPILILIVAlGSLLLVSSINWLSIYLAIELQTLTLFILVAL--KRDS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 171 A--ANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSerFIELIDSNRVNSFLAnmcalLLFlgpvaKSAQFPLHV 248
Cdd:MTH00199 144 AysTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGIN--SILTGDVGKILITIS-----LLF-----KLSAAPFHM 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 249 WLPDAMEG-PTPISALIhaATMVAAGIFFVarmfhLFEVLPFTmNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQL 327
Cdd:MTH00199 212 WAPDVYEGaPTITTALL--ATVPKIGVFSI-----LVQIGPVT-NVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHM 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 328 GYMMLALGIGSY---RAALFHLITHayskALLFLGSGSVIHSMEPIVGYspdksqnMIFMGGLRKYMPITGTTFLLGTLS 404
Cdd:MTH00199 284 GFILFGVAIGSFesiQASLIYMIIY----VIMSICSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLS 352
|
330 340
....*....|....*....|....*.
gi 1732113667 405 LCGIPPLACFWSKDEILVdSWISSAF 430
Cdd:MTH00199 353 IAGIPPLAGFLSKWLILL-SGVSSGY 377
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
4.75e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 66.68 E-value: 4.75e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1732113667 75 WIFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
81-456 |
3.06e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 69.58 E-value: 3.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 81 ISLQIGFLIDPLtSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVL---SPNLVQIYIFWELVGMC 157
Cdd:MTH00206 49 SFSNLYLSYDPL-SSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILffsSSNLLLFYILFEASLIP 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 158 SYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFdihnlserFIELIDSNRVNSFLANMCALLLFLGP 237
Cdd:MTH00206 128 TLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSL--------SLYILYFSKLTTWNNNLWWLACILAF 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 238 VAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFFVA---RMFHLFEVLPFTMNIISWVGGITALLG----ATIA 309
Cdd:MTH00206 200 LVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGsimtSSIC 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 310 LAQKDLKRGLAYSTMSQLGYMMLALGIG---SYRAALFHLITHAY-SKALLFLGSgsvihsmepiVGYSPDKSQNMIFMG 385
Cdd:MTH00206 273 LRQTDLKSLIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNR 342
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1732113667 386 GLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEG 456
Cdd:MTH00206 343 GLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHG 413
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
49-413 |
7.80e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 68.17 E-value: 7.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 49 SIAMFISFSILWQQIRGNPTYQ--LLWSWIFNKDISLQIGFLIDPLTSIMLVSVTSVGILVMI-YSDSYMSHDQGYVRFF 125
Cdd:MTH00204 36 SLAILFSTLVLWGAFDGEGQFQfiNLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPIcILISWKSIKFLFKEFL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 126 AYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDI 205
Cdd:MTH00204 116 LCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDY 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 206 HNLSErfIELIDSNRVNSFLAnmcallLFLGPVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFFVARMFHLF 284
Cdd:MTH00204 196 QILLN--IKLPLSIQKWLLVG------FFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLF 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 285 EVLPFTMN-IISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLAL---GIGSYRAALFHLITHAYSKALLFLGS 360
Cdd:MTH00204 268 PAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAV 347
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1732113667 361 GSVihsmepivgYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIpPLAC 413
Cdd:MTH00204 348 TFL---------YERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGF-PLSC 390
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
32-414 |
2.45e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 66.87 E-value: 2.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 32 ATKSLRRICAIVSIISLsiamfISFSILWQQI--RGNPTYQLLWSWIFNKDISLQIG------FLIDPLTSIMLV---SV 100
Cdd:MTH00226 40 GTSSLKRIALFWSFISL-----ISTIILWLSLdqEGGFTPLMDIDWIEGPEKIIPIImggplvFAVDGISIYFIIltgFI 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 101 TSVGILVMIYSDSYMshdqgyVRFFAYLSLFTASMLGLVLSP-NLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAF 179
Cdd:MTH00226 115 VPCSILISWHSVKYL------TKSFLICMLILEFLLYAVFSVlDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFF 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 180 ITNRVGDFGLLLGILGIYWITGSFDihnlserFIELIDSNRVNS-FLANMCALLLFLGPVAKSAQFPLHVWLPDA-MEGP 257
Cdd:MTH00226 189 FYTLIGSVLMLLCLFSLYNIHGTTD-------YLTLASCSHVVSeQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAP 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 258 TPISALIhAATMVAAGIFFVARMFhlFEVLPFTMN----IISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLA 333
Cdd:MTH00226 262 VAGSVLL-AGILLKLGGYGLVRLS--WPILPLGAQnlapAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSIT 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 334 L---GIGSYRAALFHLITHAYSKALLFLgsgsvihsmEPIVGYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPP 410
Cdd:MTH00226 339 LvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
....
gi 1732113667 411 LACF 414
Cdd:MTH00226 410 SGNF 413
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
89-449 |
1.15e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 64.59 E-value: 1.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 89 IDPLTSIMLVSVTSVGILVMIYSDSYMSHdQGYVRFFAYLSLFTASMLGLVLSPNLVQI---YIFWELVGMCSYLLIGFW 165
Cdd:MTH00127 59 TDPLSTPLLVLTCWLLPLMILASQNHTAP-EPINRQRMYITLLTSLQIFLILAFGATEIimfYVMFEATLIPTLIIITRW 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 166 FSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIhnLSERFIELIDSNRVNSFLANMCALLLFLgpvAKSAQFP 245
Cdd:MTH00127 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSM--LTLQYSQPLQLSSWADKLWWAGCLLAFL---VKMPLYG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 246 LHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTMN---IISWVGGItaLLGATIALAQKDLKRGLAYS 322
Cdd:MTH00127 213 VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSypfIILALWGI--IMTGSICLRQTDLKSLIAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 323 TMSQLGYMMLALGIG---SYRAALFHLITHAYSKALLFLGSGSvihsmepivGYSPDKSQNMIFMGGLRKYMPITGTTFL 399
Cdd:MTH00127 291 SVSHMGLVAGGILIQtpwGFTGALILMIAHGLTSSALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWF 361
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1732113667 400 LGTLSLCGIPPLACFWSKDEILVD----SWISSAFLGWIAWITAGlTGFYMFRM 449
Cdd:MTH00127 362 IASLANLALPPLPNLMGELMIITSlfnwSPWTLALTGLGTLITAG-YSLYMFLM 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
71-458 |
1.67e-10 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 63.99 E-value: 1.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 71 LLWSWIFNKDISLQIGFL-IDPLTSIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNLVQIYI 149
Cdd:MTH00014 38 LLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYI 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 150 FWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIELidsnrvnsFLANMC 229
Cdd:MTH00014 118 FFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSI--------YLMNLW 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 230 ALLLFLGPVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFFVARMFHLF-----EVLPFTMNIISWVGGITAL 303
Cdd:MTH00014 190 WLITILAFMVKMPLYTVHLWLPKAhVEAPVAGS-MILAGILLKLGGYGLLRMSSLFmhinkSLSAPFSSISLVGAVITSL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 304 lgatIALAQKDLKRGLAYSTMSQLGYM---MLALGIGSYRAALFHLITHAYSKALLFlgsgsVIHSMEpivgYSPDKSQN 380
Cdd:MTH00014 269 ----ICIRQPDLKSLIAYSSVGHMGLMtagIMSNTSWGWQGALAMMIAHGLCSSALF-----ALANMT----YETTHTRS 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1732113667 381 MIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEGDF 458
Cdd:MTH00014 336 LFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSP 413
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
123-398 |
5.54e-09 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 59.19 E-value: 5.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 123 RFFAYLSLFTAS-MLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANAcQKAFITNRVGDFGLLLGILGI--YWI 199
Cdd:CHL00011 112 RLFYFLMLAMYSgQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSA-TKFILYTAGGSIFLLIGVLGMglYGS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 200 TG-SFDIHNLSERfielidsnrvnSFLANMCALLLFLGPVA---KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGI 274
Cdd:CHL00011 191 NEpTLNFETLANQ-----------SYPVALEILFYIGFLIAyavKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGI 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 275 FFVARMFHL----FEVLPFTMNIIS-W---VGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMlaLGIGSY-----RA 341
Cdd:CHL00011 253 LLKMGAYGLirinMELLPHAHSIFSpWlviVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNG 330
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1732113667 342 ALFHLITHAYSKALLFlgsgsvihsmePIVGYSPDKSQNMIF--MGGLRKYMPITGTTF 398
Cdd:CHL00011 331 AILQIISHGFIGAALF-----------FLAGTSYDRIRLVYLdeMGGIAIPMPKIFTMF 378
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
6.33e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 59.49 E-value: 6.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgiffvarmFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRG 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTV--------YILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 319 LAYSTMSQLGYMMLALGIGSYRaALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMIFMGG------------ 386
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1732113667 387 LRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSwISSAF---------LGWIAWITAGLTGFYMFRM 449
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGS-IKIAFssslsiyylVALFAIICTCISAFYYIRI 533
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
148-408 |
1.40e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 58.18 E-value: 1.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 148 YIFWELVGMCSYLLIGFW--FSRPSAANAcqkaFITNRVGD--FGLLLGI-LGIYWITGSFDIHNLSERFIELIdsnrvn 222
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAATK----FILYTAGSslFILLAALaMAFYGDTPTFDMTALAAKDFGLG------ 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 223 sfLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFFVARMFHLF----EVLP----FTMNII 294
Cdd:PRK02546 211 --FQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKMGGYALLrmnaGMLPdahaQFAPLL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 295 SWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMlaLGIGSYRA-----ALFHLITHAYSKALLFLgsgsvihsmep 369
Cdd:PRK02546 283 IVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF----------- 349
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1732113667 370 IVGYSPDKSQNMIF--MGGLRKYMPIT---GTTFLLGTLSLCGI 408
Cdd:PRK02546 350 LVGATYDRTHTLMLdeMGGVGQKMRKMfamWTACSLASLALPGM 393
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
143-413 |
3.77e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 56.60 E-value: 3.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 143 NLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSerfielidSNRVN 222
Cdd:MTH00217 130 DLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC--------CLKIE 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 223 SFLANMCALLLFLGPVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFFVARMFHLF-EVLPFTMNIISWVGGI 300
Cdd:MTH00217 202 KELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 301 TALLGATIALAQKDLKRGLAYSTMSQLGymMLALGIGSyraalfHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQN 380
Cdd:MTH00217 282 AIIYGSLTTCRQVDLKRIIAYSSVAHMG--LVTLGIFS------HTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHT 353
|
250 260 270
....*....|....*....|....*....|....*
gi 1732113667 381 MI--FMGGLRKYMPITGTTFLLGTLSLCGIpPLAC 413
Cdd:MTH00217 354 RLikYYRGMVITMPLFGILMLLLVLANASI-PLSC 387
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
128-447 |
9.31e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 54.97 E-value: 9.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 128 LSLFTASM-LGLVL---SPNLVQIYIFWELVGMCSYLLIGFWFSrPSAANACQKAFITNRVGDFGLLLGILGIYWITGSF 203
Cdd:MTH00200 6 LPLFILSLgLGTLLtfsSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 204 DIhnlserfielidsnrvNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGiffvarmFHL 283
Cdd:MTH00200 85 GI----------------SEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAP-------FAL 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 284 FEVLPFTMN--IISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKAL-LFLGS 360
Cdd:MTH00200 142 LIQLAPALNsnILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVfLLLNL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 361 GSVIHSmepivgyspdKSQNMIFMGGlrkymPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAG 440
Cdd:MTH00200 222 LNSTKI----------NSLSSSKTKN-----PILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGS 286
|
....*..
gi 1732113667 441 LTGFYMF 447
Cdd:MTH00200 287 LLSLFFY 293
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
87-449 |
1.52e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 54.54 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 87 FLIDPLTSIMLVSVTSVGILVMIYSDSYMS-----HDQGYVRFFAYLSL-----FTASmlglvlspNLVQIYIFWELVGM 156
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYISMLIILQLtlilaFSAT--------ELILFYIFFEATLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 157 CSYLLIGFWFSRPSAANACQK-AFITnRVGDFGLLLGILGIYWITGSFDIhNLSERFIELIDSNRVNSFLANMCaLLLFL 235
Cdd:MTH00068 128 PTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC-LLAFM 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 236 gpvAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMV---AAGIFFVARMFH-LFEVLPFTMNIISWVGgitALLGATIAL 310
Cdd:MTH00068 205 ---VKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLklgGYGILRISILLTpLSKELSYPFIILALWG---VLMTSLICL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 311 AQKDLKRGLAYSTMSQLGYMMLALGIG---SYRAALFHLITHAY-SKALLFLGSGSvihsmepivgYSPDKSQNMIFMGG 386
Cdd:MTH00068 278 RQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRG 347
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1732113667 387 LRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVD--SWISSAFL--GWIAWITAGLTgFYMFRM 449
Cdd:MTH00068 348 AQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSlfNWSNWTILitGLGTLITAAYT-LYMFLM 413
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-411 |
4.07e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 53.64 E-value: 4.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 94 SIMLVSVTSVGILVMIYSDSYmshdQGYVRFFAYLSLFTASMLGLVL-SPNLVQIYIFWELVGMCSYLLIGFWFSRPSAA 172
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY----DHYGKWLSSLYILTILGMAIVLtSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPA 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 173 nacqkaFITNRVGDFGLLLGILGIYW---ITGSFDIhnlserfielidsnrvNSFLANMCALLLFLGPVAKSAQFPLHV- 248
Cdd:PRK06459 123 ------FVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVs 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 249 -WLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPFTM--NIISWVGGITALLGATIALAQKDLKRGLAYSTMS 325
Cdd:PRK06459 181 eWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYfgLTILAIGAFSILFGALYAYVSENVKGLLAFSTIE 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 326 QLGYMMLALG--------IGSYR-----AALFHLITHAYSKALLFLGSGSVIHSMepiVGYSPDKSQNMIFMGGlrkymp 392
Cdd:PRK06459 261 NNGAILVALGlymvtkqlITSIEhfsliTVILYSFAHSVAKTGLFLSSGLQEKQS---ITYSKKIRNRWIELGL------ 331
|
330
....*....|....*....
gi 1732113667 393 itgttfLLGTLSLCGIPPL 411
Cdd:PRK06459 332 ------TLLASSLSGLLPN 344
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
197-414 |
4.62e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 52.52 E-value: 4.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 197 YWITGSFDIHNLSErfielidsnrvnsflaNMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFF 276
Cdd:MTH00112 78 AWNTGQWDITQLTN----------------PTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 277 VARMFHLfevLPFTmnIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIgSYRAALFHLITHAYSKALL 356
Cdd:MTH00112 142 LLMTSNS---LNPT--LLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPM 215
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1732113667 357 FLgsgsVIHSMepivgyspdKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPLACF 414
Cdd:MTH00112 216 FL----TLNTT---------STKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGF 260
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
229-453 |
1.39e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 51.04 E-value: 1.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 229 CALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVArmfhLFEVLPFTMNIISWVGGITALLGATI 308
Cdd:MTH00144 86 SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLS----NFLDLYWLAYLLCVISVLSALVGSIG 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 309 ALAQKDLKRGLAYSTMSQLGYMMLALGIGSYrAALFHLITHAYSKALLFLGSGSvihsmepivgyspdKSQNMIFMGGLR 388
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSW-LMWMYFLIYIVSSGFLFFSLWS--------------GDSGSMKDLGSL 226
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1732113667 389 KYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLT--GFYMFRMYFVT 453
Cdd:MTH00144 227 KPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLIslFFYLSVFFSSF 293
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
94-456 |
5.08e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 49.45 E-value: 5.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 94 SIMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLV-LSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAA 172
Cdd:MTH00150 26 SSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLLILGWGYQPERL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 173 NACQKAFITNRVGDFGLLLGILGIYWITGSFdihnlserFIELIDSNRVNSFLANMCALLLFLGPVAKSAQFPLHVWLPD 252
Cdd:MTH00150 106 QAGMYMMLYTVGASLPLLLVILWMSSSYGSS--------FMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 253 A-MEGPTpisalihAATMVAAGI------FFVARMFHLFEVLPFTMNII----SWVGGitaLLGATIALAQKDLKRGLAY 321
Cdd:MTH00150 178 AhVEAPV-------AGSMILAGIllklggYGILRMMMVFSLSSSSFSIFlislSLWGG---VLTSLICLRQSDVKSLIAY 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 322 STMSQLGYMMLALGIGS---YRAALFHLITHAY-SKALLFLGSGSvihsmepivgYSPDKSQNMIFMGGLRKYMPITGTT 397
Cdd:MTH00150 248 SSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFcSSGLFCLANYT----------YEKVHSRSLFLSKGMLMLYPSLSLW 317
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1732113667 398 FLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTGFYMFRMYFVTFEG 456
Cdd:MTH00150 318 WFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHG 376
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
223-454 |
5.29e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 49.39 E-value: 5.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 223 SFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVaagiffVARMFHLFEVLPFT-MNIISWVGGIT 301
Cdd:MTH00011 84 SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQK------IAPLSILFFFTSHNiLPMMTSMAAMS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 302 ALLGATIALAQKDLKRGLAYSTMSQLGYMMLALgIGSYRAALFHLITHAYSKALLFLgsgsvihsmepIVGYSPDKSQNm 381
Cdd:MTH00011 158 ALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYIIITTPLML-----------LFAYLNAFSTK- 224
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1732113667 382 iFMGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSKDEILVDSWISSAFLGWIAWITAGLTG-FYMFRMYFVTF 454
Cdd:MTH00011 225 -FNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNlFYYLNLIFNFM 297
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
26-332 |
8.27e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 49.01 E-value: 8.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 26 LFFFSKATKSLRRICAIVSIIslsiamfisFSILWQQIRGNPTYQLLwswIFNKDISLQIGFLIDPLTSIMLVSVTSVGI 105
Cdd:PRK06591 24 SFRFIEFARIITRICILSSLL---------VSIYGYSIIQNTELSYT---MGGWTSKIGIEYRLNSLNQAIIVYLNLVLL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 106 LVMIYSD--------SYMSHDQGYVrFFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQk 177
Cdd:PRK06591 92 FFLVFCHkitnqtilKYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFD- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 178 AFITNRVGDFGLLLGILGIYWITGSFDIHNLSERFIElidsnRVNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGP 257
Cdd:PRK06591 170 YLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQE-----HTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNT 244
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1732113667 258 TPISALIHAATMVAAGIF----FVARMFHLFEVLPFTMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMML 332
Cdd:PRK06591 245 ASVILVYLAGISTIIGIYiiykFTYIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
130-421 |
5.51e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 46.65 E-value: 5.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 130 LFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIgfwfsrpsaANACQKafitnrvGDFGLLLGILGIYWITGSFDIHNLS 209
Cdd:PRK12664 71 LYYISSIAAISSSSLTLVVIGFEFMALSALMII---------AAGCPG-------GNIGAFIHYACVHFFSGVLLLVGAS 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 210 ERFielidsnrVNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLPF 289
Cdd:PRK12664 135 GQA--------QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFFSGEEILLF 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 290 tmniiswVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGS-----YRAALFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK12664 207 -------LGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVI 279
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1732113667 365 HSMEPIvgyspdksqNMIFMGGLRKyMPITGTTFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK12664 280 NRTRKF---------NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLIT 326
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
42-351 |
6.91e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 46.13 E-value: 6.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 42 IVSIISLSIAMFISFSILWQQIRGNPTYQLLWSWIFNKDISLQIGFLIDPLT----SIMLVSVTSVGILVMIYSDSYMSh 117
Cdd:MTH00205 3 IFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSfdslSLPLIMLSFWISLLMVLASYKVF- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 118 dqgYVRFFAYLSLFTASMLGLVL-----SPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLG 192
Cdd:MTH00205 82 ---KSNKNSKLFTVSVIMLLLILilsfsVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 193 ILGIYWITGSFDIHNLserfIELIDSNRVNSFLANMCALLLFLgpvaKSAQFPLHVWLPDA-MEGPTpisalihAATMVA 271
Cdd:MTH00205 159 LFFLNSLNFSLSMFFN----FPLNFSDFYLFLYWIFLMLAFLV----KLPMYFVHLWLPKAhVEAPV-------SGSMIL 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 272 AGI-----------FFVARMFHLFEVLPFTMNIISWVGGITALlgatIALAQKDLKRGLAYS-------------TMSQL 327
Cdd:MTH00205 224 AGVllklggyglirITSMLYKLNSNFSELFFSISLWGGVMTGM----ICLRQVDLKSLIAYSsvghmglmvvgvfSNTSW 299
|
330 340
....*....|....*....|....*....
gi 1732113667 328 GY-----MMLALGIGSyrAALFHLITHAY 351
Cdd:MTH00205 300 GMngaiiMMVAHGLCS--SGMFALANVNY 326
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
43-411 |
8.64e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 45.74 E-value: 8.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 43 VSIISLSIAMFISFSILwqqirgNPTYQLLWSwifnkdiSLQIGFLIDPLTSIMLVSVTSVGILVMIYSDSYMS-HDQGY 121
Cdd:MTH00044 26 ISISQSSLISLLSLFLL------NNHWSSSWH-------NLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSnNSPNN 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 122 VRFFAYLSLFTASMLGLVLSP-NLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWIT 200
Cdd:MTH00044 93 QRTFISLIIIILTALIITFSSlELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 201 gsfdiHNLSERFIELIDSNRVNSFLANMCALLLFLGPVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFFVAR 279
Cdd:MTH00044 173 -----SSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYGLIR 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 280 MFHLFeVLPFTMNIIS-------WVGGITALlgatIALAQKDLKRGLAYSTMSQLGYMMLALGIGSY---RAALFHLITH 349
Cdd:MTH00044 247 LINLF-SLPSANNISFilivfccWGALITSI----ICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNwgiNGALILMIAH 321
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1732113667 350 AY-SKALLFLGSgsvihsmepiVGYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPPL 411
Cdd:MTH00044 322 GLvSSALFCLAN----------ILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPL 374
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-417 |
2.84e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.89 E-value: 2.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 222 NSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHLFEVLpftmniiSWVGGIT 301
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGL-------LICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 302 ALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNM 381
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190
....*....|....*....|....*....|....*.
gi 1732113667 382 IFmgglrkympitgttFLLGTLSLCGIPPLACFWSK 417
Cdd:MTH00197 227 VF--------------LGLSFLSLGGLPPLSGFFLK 248
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
124-417 |
4.53e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 43.38 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 124 FFAYLSLFTASMLGLVLSPNLVQIYIFWELVGMCSYLLIGFWFSrPSAANACQKAFITNRVGDFGLLLGILGIYWITGSF 203
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 204 DIhnlserfielidsnrvNSFLANMCALLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFFVARMFHL 283
Cdd:MTH00041 85 SI----------------NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 284 FEVLPF-TMNIISWVGGITALLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGS 362
Cdd:MTH00041 143 ISISNLlNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNF 222
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1732113667 363 VIHSMEPIvgyspdksqnmifmGGLRKYMPITGTTFLLGTLSLCGIPPLACFWSK 417
Cdd:MTH00041 223 SLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNK 263
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
47-410 |
5.25e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 43.34 E-value: 5.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 47 SLSIAMfISFSILWQQIRGNPTYQLLwswifnkdislqigFLIDPLTSIMLVSVTSVGILVMIYSDSYMSHDQgYVRFFA 126
Cdd:MTH00110 31 SLLISL-ISLLLLNQPNDNSLNFSLL--------------FFSDSLSTPLLILTTWLLPLMLMASQHHLSKEP-LTRKKL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 127 YLSLFTASMLGLVL---SPNLVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGIYWITGSF 203
Cdd:MTH00110 95 YITMLILLQLFLIMtftATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 204 DIHNLSeRFIELIDSNRVNSF--LANMCALLLflgpvaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFF---- 276
Cdd:MTH00110 175 NFLLLQ-LWAQPLPNSWSNNLlwLACMMAFMV------KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklgg 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 277 --VARMFHLFEVLPFTMN----IISWVGGItalLGATIALAQKDLKRGLAYSTMSQLGYMMLALGIG---SYRAALFHLI 347
Cdd:MTH00110 241 ygMMRITIILNPLTEFMAypflMLSLWGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMI 317
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1732113667 348 THAYSKALLFLGSGSvihsmepivGYSPDKSQNMIFMGGLRKYMPITGTTFLLGTLSLCGIPP 410
Cdd:MTH00110 318 AHGLTSSMLFCLANS---------NYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
169-421 |
3.95e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 40.29 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 169 PSAANACQKAFITNRVGDFGLLLGILGIYWITGSFDIHNLSerfielidsnrvNSFLANM--CALLLFLGpVAksaqfPL 246
Cdd:MTH00070 50 PRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQ------------TPLPTIMltIALMMKLG-IA-----PF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 247 HVWLPDAMEGPTPISALIHA-----ATMvaagiffvARMFHLFEVLPFTMNIIswVGGITALLGATIALAQKDLKRGLAY 321
Cdd:MTH00070 112 HFWLPEVLQGLDLTTGLILStwqklAPM--------ALLIQISHLLNSNLLII--MGLLSTLIGGWGGLNQTQLRKIMAY 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1732113667 322 STMSQLGYMMLALGIgSYRAALFHLITHAYSKALLFLgsgSVIHSMepivgyspdkSQNMIFMGGLRKYMPITGTTFLLG 401
Cdd:MTH00070 182 SSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLN----------STNINKLSSSWSKNPTLTSMMMLT 247
|
250 260
....*....|....*....|
gi 1732113667 402 TLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00070 248 LLSLGGLPPTTGFIPKWLIL 267
|
|
| |
