NCBI Conserved Domain Search

Conserved domains on [gi|1730667823|gb|QEI20706|]

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TonB-dependent receptor [Cellvibrio japonicus]

Protein Classification

TonB-dependent receptor( domain architecture ID 11446927)

TonB dependent receptor having a carboxypeptidase regulatory-like domain, may act as a channel to allow import of extracellular nutrients, such as iron-siderophore complexes or non-Fe compounds

Gene Ontology: GO:0009279|GO:0055085

PubMed: 36944260|35464957

TCDB: 1.B.14

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

CirA

COG1629

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

45-712

2.79e-76

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 258.60 E-value: 2.79e-76

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVlDAGSRNPSSLTIRGLrfdevgdndfGGDGGSVATYVDN 120
Cdd:COG1629    10 RTDESLQDVPGSVSVISREQledqPATDLGDLLRRVPGVSV-TSAGGGAGQISIRGF----------GGGGNRVLVLVDG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 121 IPL----QGFFVPPQFTLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPDLSQsyvrlGAGISQTAESDDLnYDTDLV 196
Cdd:COG1629    79 VPLndpsGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGK-----GGEVSASYGSYGT-YRASLS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 197 VNSPlTDTVGLRLLLSQTENQGFIDNpyaltgptkdiNDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVD-DRQAANEA 275
Cdd:COG1629   153 LSGG-NGKLAYRLSASYRDSDGYRDN-----------SDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDsPGYLTLAA 220

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 276 FTGDEYQASHRFPQFM---EGKWHLYGIDAEYQF--DTATLTASVnRYDYETVtasdQTDLFLSYYDAGSGYFSSYDDfi 350
Cdd:COG1629   221 LRPRGAMDDGTNPYSNdtdDNTRDRYSLSLEYEHlgDGLKLSASA-YYRYDDT----DLDSDFTPTPADGGTLEQTDF-- 293

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 351 gvgagnvEVKKDSAEIRLASDND--QPLRWLIGGFYSQDDLDVLIADFLPGFADFWEENRPLDLDYIATQsetlkeFSTF 428
Cdd:COG1629   294 -------DNRTYGLELRLTYDLGfgGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADDDGTTTS------LALY 360

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 429 GELSYDLTAQWEVTLGARHFRYDDKLDSCYALFPLEEGETEipldcsasddvQTGTLGKFSTRYRFTEQHQAYFLVSEGY 508
Cdd:COG1629   361 AQDTYKLTDKLTLTAGLRYDYVSYDVDDTVTGTDSASGSRS-----------YSAFSPSLGLTYQLSPNLSLYASYSRGF 429

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 509 RRGGAN-LVPAGAEDYAAYDPD----TALNYELGTKTAWFNQRLLVNAAVFYMDWKDIQVQSYIEDFRA----TVNAGDA 579
Cdd:COG1629   430 RAPTFGeLYANGTDPYSVGNPDlkpeTSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGfstyYTNAGKA 509

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 580 RSQGVELETKAILSDRWSVNLGYSFTEAELTETVesitgSYENAYSGDRLPGSPKQQWNLGVSYAQPigeAALDASLQLS 659
Cdd:COG1629   510 RSYGVELELSYQLTPGLSLNASYSYTDAKFDDDT-----DGSADLDGNRLPGVPPLTANLGLTYEFP---GGWSLGLGVR 581

                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1730667823 660 HIGDVYTALNDEFYNYSrldAYTTANARINVSL-RNWHFGAFVTNIANERGVTG 712
Cdd:COG1629   582 YVGDRYLDDANTQGAPG---GYTLVDLGAGYRFgDNLTLSLGVDNLFDKKYATS 632

Name

Accession

Description

Interval

E-value

CirA

COG1629

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

45-712

2.79e-76

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 258.60 E-value: 2.79e-76

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVlDAGSRNPSSLTIRGLrfdevgdndfGGDGGSVATYVDN 120
Cdd:COG1629    10 RTDESLQDVPGSVSVISREQledqPATDLGDLLRRVPGVSV-TSAGGGAGQISIRGF----------GGGGNRVLVLVDG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 121 IPL----QGFFVPPQFTLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPDLSQsyvrlGAGISQTAESDDLnYDTDLV 196
Cdd:COG1629    79 VPLndpsGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGK-----GGEVSASYGSYGT-YRASLS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 197 VNSPlTDTVGLRLLLSQTENQGFIDNpyaltgptkdiNDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVD-DRQAANEA 275
Cdd:COG1629   153 LSGG-NGKLAYRLSASYRDSDGYRDN-----------SDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDsPGYLTLAA 220

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 276 FTGDEYQASHRFPQFM---EGKWHLYGIDAEYQF--DTATLTASVnRYDYETVtasdQTDLFLSYYDAGSGYFSSYDDfi 350
Cdd:COG1629   221 LRPRGAMDDGTNPYSNdtdDNTRDRYSLSLEYEHlgDGLKLSASA-YYRYDDT----DLDSDFTPTPADGGTLEQTDF-- 293

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 351 gvgagnvEVKKDSAEIRLASDND--QPLRWLIGGFYSQDDLDVLIADFLPGFADFWEENRPLDLDYIATQsetlkeFSTF 428
Cdd:COG1629   294 -------DNRTYGLELRLTYDLGfgGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADDDGTTTS------LALY 360

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 429 GELSYDLTAQWEVTLGARHFRYDDKLDSCYALFPLEEGETEipldcsasddvQTGTLGKFSTRYRFTEQHQAYFLVSEGY 508
Cdd:COG1629   361 AQDTYKLTDKLTLTAGLRYDYVSYDVDDTVTGTDSASGSRS-----------YSAFSPSLGLTYQLSPNLSLYASYSRGF 429

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 509 RRGGAN-LVPAGAEDYAAYDPD----TALNYELGTKTAWFNQRLLVNAAVFYMDWKDIQVQSYIEDFRA----TVNAGDA 579
Cdd:COG1629   430 RAPTFGeLYANGTDPYSVGNPDlkpeTSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGfstyYTNAGKA 509

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 580 RSQGVELETKAILSDRWSVNLGYSFTEAELTETVesitgSYENAYSGDRLPGSPKQQWNLGVSYAQPigeAALDASLQLS 659
Cdd:COG1629   510 RSYGVELELSYQLTPGLSLNASYSYTDAKFDDDT-----DGSADLDGNRLPGVPPLTANLGLTYEFP---GGWSLGLGVR 581

                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1730667823 660 HIGDVYTALNDEFYNYSrldAYTTANARINVSL-RNWHFGAFVTNIANERGVTG 712
Cdd:COG1629   582 YVGDRYLDDANTQGAPG---GYTLVDLGAGYRFgDNLTLSLGVDNLFDKKYATS 632

ligand_gated_channel

cd01347

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...

56-742

3.11e-50

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.

Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 186.50 E-value: 3.11e-50

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  56 SVTVITRLD----AINNLSDIAAQVPGFTVLDAGSRNPSSLTIRGLrfdevgdndfggDGGSVATYVDNIPLQG------ 125
Cdd:cd01347     1 SVSVITAEDiekqPATSLADLLRRIPGVSVTRGGGGGGSTISIRGF------------GPDRTLVLVDGLPLASsnygrg 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 126 ---FFVPPQFtlkdLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPdLSQSYVRLGAGISQTAESDdlNYDTDLVVNSPLT 202
Cdd:cd01347    69 vdlNTIPPEL----IERVEVLKGPSSALYGSGAIGGVVNIITKRP-TDEFGGSVTAGYGSDNSGS--SGGGGFDVSGALA 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 203 --DTVGLRLLLSQTENQGFIDnpyalTGPTKDINDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVDdrqaaneaFTGDE 280
Cdd:cd01347   142 ddGAFGARLYGAYRDGDGTID-----GDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDAD--------GPGGT 208

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 281 YQASHRFPQFMEGKWHLYGIDAEYQFDTATLTASVNRYDYETVTASDQtdlflsyYDAGSGYFSSYDDFIGvgagnvevk 360
Cdd:cd01347   209 LPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWT-------LRANLSYSYTDNDGDP--------- 272

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 361 kdsaEIRLASDNDQPLRWLIGGFYSQDDLDVLIADflpgfadfWEENRPLDLDYIA--------TQSETLKE--FSTFGE 430
Cdd:cd01347   273 ----LILNGGNNAAGGDLGRSGYSSERDTTQLGFD--------AGLNAPFGTGPVAhtltlgveYRREELDEkqTALYAQ 340

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 431 LSYDLTAQWEVTLGARHFRYDDKLDSCYALFPleegeteipldcsASDDVQTGTLGKFSTRYRFTEQHQAYFLVSEGYRR 510
Cdd:cd01347   341 DTIELTDDLTLTLGLRYDHYDQDSKDTIAGGT-------------TAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRA 407

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 511 GGANLVPAGAEDYAAY-------DPDTALNYELGTKTAWFNqRLLVNAAVFYMDWKDIQVQSYIEDFRAT----VNAGDA 579
Cdd:cd01347   408 PSLGELYGGGSHGGTAavgnpnlKPEKSKQYELGLKYDPGD-GLTLSAALFRIDIKNEIVSTPTNTGLGLvtvyVNGGKA 486

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 580 RSQGVELETKAILSDRWSVNLGYSFTEAELTETVESITgsyenaysGDRLPGSPKQQWNLGVSYAQPIGEaaLDASLQLS 659
Cdd:cd01347   487 RIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDGATT--------GNRLPGIPKHTANLGLDYELPDEG--LTAGGGVR 556

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 660 HIGDVYtALNDEFYNYSRLDAYTTANARINVSL-RNWHFGAFVTNIANERGVTGIRTDEFYGERgqfeYVTRPRTVGVSA 738
Cdd:cd01347   557 YRGKQY-ADTANGNNTVKVPGYTLVDLSASYQFtKNLTLRLGVNNLFDKDYYTSLSVRGSGLYG----YYGPGRTYYLSV 631


                  ....
gi 1730667823 739 RYQF 742
Cdd:cd01347   632 SYKF 635

TonB-siderophor

TIGR01783

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...

52-742

3.41e-45

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]

Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 172.21 E-value: 3.41e-45

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  52 DVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDAGSRNP-SSLTIRGLrfdevgdndfggdggSVATYVDNIPLQGF 126
Cdd:TIGR01783   1 DIPQSVSVITRQEledqQAGSLSEALQRVPGVVVGGSGGTTQfGNITIRGF---------------GLEVDIDNVYLDGV 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 127 FV--PPQFTLKDL---QQVEVLRGPQGTLYGNASTGGLVRYVTAKP-DLSQSYVRLGAGIsqtaesdDLNYDTDLVVNSP 200
Cdd:TIGR01783  66 PLlsRGNLAIVDPamvERVEVLRGPASLLYGGSAPGGVINIVTKRPqDEPKGSVTFGAGT-------RSGYRTAFDLGGP 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 201 LTD--TVGLRLLLSQTENQGFIDNpyaltgptkdiNDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVDDRQAANEAFTG 278
Cdd:TIGR01783 139 LGAdgTFRGRLNGARQDGDSFYDG-----------AGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGG 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 279 DEYQ--ASHRFPQfmEGKWHLY--------GIDAEYQFDTaTLTASVNRYDYETVTASDQtdLFLSYYDAGSGYFssydd 348
Cdd:TIGR01783 208 TSGRdlSSDRYLG--TSSNRNYddreylsyGLSLEYQFND-VWTGKQNLRYSYFDTDSNQ--VQASGYSSDGGLF----- 277

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 349 fiGVGAGNVEVKKDSAEIRLASDNDQ-----PLRWLIGGFYSQDDLDVLIADFLP---------------GFADFWEENR 408
Cdd:TIGR01783 278 --GRSLTVVNVKQDRVQIDAGLDGEFetgpiEHDLLLGVSYGQRTTNRFNNTGYPsdniysltatssartDIGDSPKDRA 355

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 409 PLdldyiaTQSETLkefSTFGELSYDLTAQWEVTLGARHfrydDKLDScyalfpleegETEIPLDCSASDDVQTGTLGKF 488
Cdd:TIGR01783 356 LS------STTKAL---NGVALQRILLADKWTLTLGGRY----DSVDV----------KSNNGVAGSTGKRDDSQFTPSL 412

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 489 STRYRFTEQHQAYFLVSEGYRRGGANLVPAGAEDYAaYDPDTALNYELGTKTAWFNqRLLVNAAVFYMDwKDIQVQSYIE 568
Cdd:TIGR01783 413 GVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDI-LEPEKGKNYELGVRYDLGD-SLLATAALFRIT-KDNQLVQDPV 489

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 569 DFRATVNAGDARSQGVELETKAILSDRWSVNLGYSFTEAELTETVesitgsyENAYSGDRLPGSPKQQWNLGVSYAQPIG 648
Cdd:TIGR01783 490 NGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDT-------NGDTQGNTVPFVPKHTASLWASYAPPVG 562

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 649 EAALDASLQLSHIGDVYTALNdefyNYSRLDAYTTANARIN---VSLRNWHFGAFVTNIANERGVT-GIRTDEFYGergq 724
Cdd:TIGR01783 563 DNGLTLGGGVQYTGKAYVDGG----NTGKVPSYTVVDLSVRydlTKKKNLTLALNVNNLFDRDYYTsGYRWGPSAY---- 634

                         730
                  ....*....|....*...
gi 1730667823 725 fEYVTRPRTVGVSARYQF 742
Cdd:TIGR01783 635 -IYPGAPRTVGLSVSYDF 651

TonB_dep_Rec

pfam00593

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

295-741

7.20e-28

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 117.95 E-value: 7.20e-28

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 295 WHLYGIDAEYQFDTATLTASVNRYDYETVTASDQTDLFLSYYDAGSGY-FSSYDDFIGVGAGNVEVKKDSAEIRLASDND 373
Cdd:pfam00593  49 LYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSnSSGLSGAGDYLSDDRLYGLYGLDGDLELSLD 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 374 QPLRWLIGGFYSQDDLDVLIADFLPgfADFWEENRPLDLDYIATQSETlkeFSTFGELSYDLTAQWEVTLGARHFRYDDK 453
Cdd:pfam00593 129 LSHDLLLGVELRTAGLDYRRLDDDA--YDPYDPANPSSSSYSDTTTDS---YGLYLQDNIKLTDRLTLTLGLRYDHYSTD 203

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 454 LDScyalfpleegeteIPLDCSASDDVQTGTLGKFSTRYRFTEQHQAYFLVSEGYRR---------GGANLVPAGAEDYA 524
Cdd:pfam00593 204 GDD-------------GNGGGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRApslgelygsGSGGGGGAVAGGNP 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 525 AYDPDTALNYELGTKtaWFNQRLLVNAAVFYMDWKDIQVQSYIEDFRAT-----VNAGDARSQGVELETKAILSDRWSVN 599
Cdd:pfam00593 271 DLKPETSDNYELGLK--YDDGRLSLSLALFYIDIKNLITSDPDGPGLGGtvytyTNVGKARIRGVELELSGRLWGLGLSG 348

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 600 LGYSFTEAELTETVesitgsyenAYSGDRLPGSPKQQWNLGVSYAQPIGEAALDASLQLSHIGDVYTAlndEFYNYSRLD 679
Cdd:pfam00593 349 GGYTYTDADDDADA---------DDTGNPLPNVPRHTANLGLTYDFPLGGWGARLGARYVGSGERRYG---DAANTFKTP 416

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1730667823 680 AYTTANARINVSL-RNWHFGAFVTNIANERGVTGIRTDEFYGERgqfeYVTRPRTVGVSARYQ 741
Cdd:pfam00593 417 GYTLVDLSAGYRLnKNLTLRLGVNNLFDKYYKRYYSSGGGNLGG----YPGPGRTFYLGLSYK 475

PRK13483

ligand-gated channel protein;

48-662

3.51e-14

ligand-gated channel protein;

Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 76.35 E-value: 3.51e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  48 QRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDAGSRNPSSLTIRGLRFDEVGDNDFGGDGGSVATYVDNIPL 123
Cdd:PRK13483   45 QQIRDAPASISVITREDlenrFYRDLTDALLDVPGVVVTGGGDRTDISLRGMGSQYTLILVDGKRQSSRETRPNSDGPGV 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 124 QGFFVPPqftLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAK-PDLSQSYVRLGAGISQTAESDDLnYDTDLVVNSPL- 201
Cdd:PRK13483  125 EQAWTPP---LAAIERIEVIRGPMSSLYGSDAIGGVINIITRKvPNEWQGEVRLDTTLQENSDSGNV-YQANFFVNGPLi 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 202 TDTVGLRLllsqtenqgfidnpYAltGPTKDINDDKTEAVRLSALWQATDAFSLAGSyhyqkvnvDDRQAANEAFTGDEY 281
Cdd:PRK13483  201 KDLLGLQL--------------YG--QYTQREEDDIEGGYRDKDARSLTAKLALTPN--------EDHDIMLEVGTSNQE 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 282 QASHrfpqfmEGKWHLYGIDAEYQFDTATLTASVNRYDYETVTASDQtdlflSYYDagsgyFSSYDDFIgvgagNVEVKK 361
Cdd:PRK13483  257 RDST------VGKTVAPLAPGESCGRRGCPESSTTEYERSTVSLSHT-----GRWD-----FGTSDTYI-----QHEEFD 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 362 DSAEIRLASDNDQPLRWLI----------GGFYSQDDLDvliaDFlpgfadfwEENRPLDLDYIATqsetlKEFSTFGEL 431
Cdd:PRK13483  316 NKSREMKIKNTDFQSSLVAplgqehtltfGAAYNHQDLT----DE--------TSNQISDLTDISR-----TQWAVFSED 378

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 432 SYDLTAQWEVTLGArhfRYDdkldscyalfpleegeteipldcsasDDVQTGtlGKFSTR----YRFTEQHQAYFLVSEG 507
Cdd:PRK13483  379 EWRIADDFALTGGL---RLD--------------------------HDENFG--GHVSPRvygvWNLAPSWTVKGGVSTG 427

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 508 YRR-------GGANLVPAGAEDYAAYD--PDTALNYELGTKTAWFNqRLLVNAAVFYMDWKD---------IQVQSYIED 569
Cdd:PRK13483  428 FRApslrqttPDWGQVSRGGNIYGNPDlkPETSLNKELGLYYDLGS-GLTASLTVFYNEFKDkitrvacpaTQCTDGPNQ 506

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 570 FRAT----VNAGDARSQGVELETKAILSDRWSVNLGYSFTEAeltetvESITGsyenAYSGDRLPGSPKQQWNLGVSYaQ 645
Cdd:PRK13483  507 FGADpttyVNIDEAVTQGVEASLSYPITSTLSLSGNYTYTDS------EQKSG----AYKGSPLNQLPKHLFQASLNW-E 575

                         650
                  ....*....|....*..
gi 1730667823 646 PIgeAALDASLQLSHIG 662
Cdd:PRK13483  576 PT--DRLNSWARVNYRG 590

Name

Accession

Description

Interval

E-value

CirA

COG1629

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

45-712

2.79e-76

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 258.60 E-value: 2.79e-76

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVlDAGSRNPSSLTIRGLrfdevgdndfGGDGGSVATYVDN 120
Cdd:COG1629    10 RTDESLQDVPGSVSVISREQledqPATDLGDLLRRVPGVSV-TSAGGGAGQISIRGF----------GGGGNRVLVLVDG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 121 IPL----QGFFVPPQFTLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPDLSQsyvrlGAGISQTAESDDLnYDTDLV 196
Cdd:COG1629    79 VPLndpsGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGK-----GGEVSASYGSYGT-YRASLS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 197 VNSPlTDTVGLRLLLSQTENQGFIDNpyaltgptkdiNDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVD-DRQAANEA 275
Cdd:COG1629   153 LSGG-NGKLAYRLSASYRDSDGYRDN-----------SDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDsPGYLTLAA 220

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 276 FTGDEYQASHRFPQFM---EGKWHLYGIDAEYQF--DTATLTASVnRYDYETVtasdQTDLFLSYYDAGSGYFSSYDDfi 350
Cdd:COG1629   221 LRPRGAMDDGTNPYSNdtdDNTRDRYSLSLEYEHlgDGLKLSASA-YYRYDDT----DLDSDFTPTPADGGTLEQTDF-- 293

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 351 gvgagnvEVKKDSAEIRLASDND--QPLRWLIGGFYSQDDLDVLIADFLPGFADFWEENRPLDLDYIATQsetlkeFSTF 428
Cdd:COG1629   294 -------DNRTYGLELRLTYDLGfgGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADDDGTTTS------LALY 360

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 429 GELSYDLTAQWEVTLGARHFRYDDKLDSCYALFPLEEGETEipldcsasddvQTGTLGKFSTRYRFTEQHQAYFLVSEGY 508
Cdd:COG1629   361 AQDTYKLTDKLTLTAGLRYDYVSYDVDDTVTGTDSASGSRS-----------YSAFSPSLGLTYQLSPNLSLYASYSRGF 429

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 509 RRGGAN-LVPAGAEDYAAYDPD----TALNYELGTKTAWFNQRLLVNAAVFYMDWKDIQVQSYIEDFRA----TVNAGDA 579
Cdd:COG1629   430 RAPTFGeLYANGTDPYSVGNPDlkpeTSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGfstyYTNAGKA 509

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 580 RSQGVELETKAILSDRWSVNLGYSFTEAELTETVesitgSYENAYSGDRLPGSPKQQWNLGVSYAQPigeAALDASLQLS 659
Cdd:COG1629   510 RSYGVELELSYQLTPGLSLNASYSYTDAKFDDDT-----DGSADLDGNRLPGVPPLTANLGLTYEFP---GGWSLGLGVR 581

                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1730667823 660 HIGDVYTALNDEFYNYSrldAYTTANARINVSL-RNWHFGAFVTNIANERGVTG 712
Cdd:COG1629   582 YVGDRYLDDANTQGAPG---GYTLVDLGAGYRFgDNLTLSLGVDNLFDKKYATS 632

Fiu

COG4774

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];

45-742

2.56e-68

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];

Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 236.70 E-value: 2.56e-68

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITR--LDAIN--NLSDIAAQVPGFTVLDAGSRNPSSLTIRGlrFDevgdndfggdgGSVATYVDN 120
Cdd:COG4774     1 KTDTPLLDTPQSVTVVTRelIEDQGatSLADALRNVPGVTFGAGEGGNGDSFSIRG--FS-----------ASGDIYVDG 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 121 IPLQGFFVPPQFtlkDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPDLSQSY-VRLGAGisqtaeSDDlNYDTDLVVNS 199
Cdd:COG4774    68 LRDPGQYRRDTF---NLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTeVTLTYG------SDG-QRRATLDVNG 137

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 200 PLTDTVGLRLLLSQTENQGFIDNpyaltgptkdiNDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVDDRQAANEAFTGD 279
Cdd:COG4774   138 PLGDDLAYRLNGMYRDSDSYRDG-----------VDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVPAVANGR 206

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 280 EYQ--ASHRFPQ---FMEGKWHLYGIDAEYQF-DTATLTASVNRYDYETVTASDQTDLFLSYYDAGSGYFSSYDDFIGVG 353
Cdd:COG4774   207 PVDvdRSTFYGQpddYSDSETDSATLRLEHDFnDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLS 286

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 354 A-GNVEVKKDSAEIRLasdndqplRWLIGGFYSQDDLDVLIADFL----------PGFADFWEENRPLDLDYiatqSETL 422
Cdd:COG4774   287 NqTDLTGKFDTGGVKH--------TLLAGVEYSREDSDNARYSGGgtaptvnlynPVYGAPVTGPTLGGADN----DSRT 354

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 423 KEFSTFGELSYDLTAQWEVTLGARHFRYDDKLDScyalfpleegeteIPLDCSASDDVQTGTLGKFSTRYRFTEQHQAYF 502
Cdd:COG4774   355 DTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYTD-------------RTTGATTSSYDDSAFSPRAGLVYKPTPNLSLYA 421

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 503 LVSEGYRRGGAnlVPAGAEDYAAYDPDTALNYELGTKTAWFNQRLLVNAAVFYMDWKDIQVQSyIEDFRATVNAGDARSQ 582
Cdd:COG4774   422 SYSTSFNPGGG--APSLSNAGQALDPEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTNVRTTD-PANPGVYVQTGEQRSR 498

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 583 GVELETKAILSDRWSVNLGYSFTEAELTETVESitgsyenAYSGDRLPGSPKQQWNLGVSYAqpIGEAALDASLQLSHIG 662
Cdd:COG4774   499 GVELEATGELTPGWSVLAGYTYLDAEITKSANA-------ANVGNRLPNVPRHSASLWTTYD--LPLPGLTLGGGVRYVG 569

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 663 DVYTALNdefyNYSRLDAYTTANARINVSL-RNWHFGAFVTNIANERGVTGIRTDEFYgergqfeYVTRPRTVGVSARYQ 741
Cdd:COG4774   570 SRYADAA----NTVKLPSYTRFDAGASYRLnKNLTLRLNVNNLTDKRYYASAYGSGYV-------TPGAPRTVLLSASYR 638


                  .
gi 1730667823 742 F 742
Cdd:COG4774   639 F 639

FhuE

COG4773

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...

45-742

5.86e-65

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];

Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 228.63 E-value: 5.86e-65

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITR--LD--AINNLSDIAAQVPGFTVLDAGSRNPSSLTIRGLRFDEVgdndfggdggsvatYVDN 120
Cdd:COG4773    57 KLDTPLRETPQSVSVVTRqlIEdqGATTLDDALRNVPGVTVSSYDGGGRDSFSIRGFSIDNY--------------LRDG 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 121 IPLQGFFVPPQFTLkDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKP-DLSQSYVRLGAGisqtaeSDDlNYDTDLVVNS 199
Cdd:COG4773   123 LPLGGFGGGQPDTA-NLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPtAEPQGEVSLSAG------SWD-TYRATADVGG 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 200 PLTD--TVGLRLLLSQTENQGFIDNpyaltgptkdiNDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVDDrQAANEAFT 277
Cdd:COG4773   195 PLNEdgTLRYRLNAAYEDGDSFRDG-----------VDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTG-DRGFLPLD 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 278 GDEYQASHRFP-----QFMEGKWHLYGIDAEYQFD---TATLTASVNRYDYETVTASdqtdlFLSYYDAGSGYFSSYddf 349
Cdd:COG4773   263 GTLLDLPRSTNlgepwDYYDTETTTLFAELEHRFNddwSLRANARYSDSDRDGRSAY-----AYGAPDAATGTLTRY--- 334

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 350 igVGAGNVEVKKDSAEIRLASDNDQ-PLR--WLIGGFYSQDDLDVLIADFLPG-FADFWEENRPLDLDYIATQSETLKEF 425
Cdd:COG4773   335 --ASARDGDSRSDSLDANLNGKFETgGLEhtLLVGADYSRYDSDSDSATAGTInIYNPVYGNLPEPDFDASDTDTTTRQT 412

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 426 STFGELSYDLTAQWEVTLGARHFRYDDkldscyalfpleegETEIPLDCSASDDVQTGTLGKFSTRYRFTEQHQAYFLVS 505
Cdd:COG4773   413 GLYAQDQISLTDRLSLLLGGRYDWYET--------------DSTNRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYS 478

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 506 EGYrrggaNLVPAGAEDYAAYDPDTALNYELGTKTAWFNQRLLVNAAVFYMDWKDIQVQSYiEDFRATVNAGDARSQGVE 585
Cdd:COG4773   479 ESF-----EPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDP-DNPNFYVQVGEVRSRGVE 552

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 586 LETKAILSDRWSVNLGYSFTEAELTETvesitgsyENAYSGDRLPGSPKQQWNLGVSYAQPIGEAA-LDASLQLSHIGDV 664
Cdd:COG4773   553 LELSGELTPGLNLIAGYTYTDAKITKD--------ADALEGKRLTNVPRHTASLWTTYRFPSGALKgLGLGGGVRYVGER 624

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 665 YTalndEFYNYSRLDAYTTANARINVSL-RNWHFGAFVTNIANERGVTGIRTDE--FYGErgqfeyvtrPRTVGVSARYQ 741
Cdd:COG4773   625 YG----DAANTFTLPSYTLVDAGARYDLgKNWTLQLNVNNLFDKKYYASSGSRGyvYYGA---------PRNVRLSLSYK 691


                  .
gi 1730667823 742 F 742
Cdd:COG4773   692 F 692

FepA

COG4771

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...

45-689

7.64e-55

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];

Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 198.93 E-value: 7.64e-55

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTV-LDAGSRNPSSLTIRGLRFDEVgdndfggdggsvATYVD 119
Cdd:COG4771    36 RTEQSLSDAPASVSVITAEEieklGATDLADALRLLPGVSVtRSGGRGGSSGISIRGLGGDRV------------LVLID 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 120 NIPL-----QGFFVPPQFTLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKP-DLSQSYVRLGAGisqtaESDDLNYDT 193
Cdd:COG4771   104 GVPVnnpalGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPtDELEGSVSLGYG-----SNGNGTYSG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 194 DLVVNSPlTDTVGLRLLLSQTENQGFIDNPyalTGPTKDINDDKTEAVRLSALWQATDAFSLAGSYHYQKvnvDDRQAAN 273
Cdd:COG4771   179 SLSLGGP-GDKLSFLLSGSYRDRDGYLDYR---NGGFVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSR---QDRDGGP 251

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 274 EAFTGDEYQASHRFPQFMEGKWHLYGIDAEYQF-DTATLTASVNRYDYEtvtasdqtdlflSYYDAGSGYFSSYDDFigv 352
Cdd:COG4771   252 PTLGDTEISSDNAGDRDTTTDRGNYSLRYNGDLgDNLDLSLYYSRTDRD------------STNGSLGGSTGSFSDS--- 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 353 gagnvEVKKDSAEIRLASDNDQPLRWLIGGFYSQDDLDvliadflpgfadfweenrplDLDYIATQSETLKEFSTFGELS 432
Cdd:COG4771   317 -----DDTTYGLELDLTYPLGGNHTLTLGAEYRYDDLD--------------------SSSFLGGADASRDTYGLFAQDE 371

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 433 YDLTAQWEVTLGARHFRYDDkldscyalfpleegeteipldcsASDDVQTGTLGKFSTRYRFTEQHQAYFLVSEGYRRGG 512
Cdd:COG4771   372 WKLTDKLTLTAGLRYDYYST-----------------------FGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPS 428

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 513 ANLVPAGAEDYAAY--------DPDTALNYELGTKTAWFNQRLLVNAAVFYMDWKDIQVQSYIE----DFRATVNAGDAR 580
Cdd:COG4771   429 LAELYGSGTGTPGRyvlgnpdlKPETSDNYELGLEYRLGNGGLSLSLTGFYTDIKDLIVLVPVGpgpgDVLQYENVGKAR 508

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 581 SQGVELETKAILSDRWSVNLGYSFTEAEltetvesitgsYENAYSGDRLPGSPKQQWNLGVSYAQPIGEAALDASLQLSH 660
Cdd:COG4771   509 TYGLELELKYRLGKGLTLTASYTYLDSK-----------IDDGDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGG 577

                         650       660
                  ....*....|....*....|....*....
gi 1730667823 661 IGDVYTALNDEFYNYSRLDAYTTANARIN 689
Cdd:COG4771   578 RYVTPPSGRLEGYTPGYTLLDLRASYKLT 606

FecA

COG4772

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];

45-742

3.34e-51

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];

Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 189.75 E-value: 3.34e-51

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDA-GSRNPSSLTIRGLrfdevgdndFGGDGGSVATYVD 119
Cdd:COG4772    33 AAEARLKDVPGSVSVVDREElenqAATSLREVLRRVPGVNVQEEdGFGLRPNIGIRGL---------GPRRSRGITLLED 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 120 NIPL--------QGFFVPPQFTLkdlQQVEVLRGPQGTLYGNASTGGLVRYVTAKPdlsqsYVRLGAGISQTAESDDLnY 191
Cdd:COG4772   104 GIPIapapygdpAAYYFPDLERM---ERIEVLRGAAALRYGPQTVGGAINFVTRTI-----PTAFGGELRVTGGSFGY-R 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 192 DTDLVVNSPLTDtVGLRLLLSQTENQGFIDNPYAltgptkDINDdkteaVRLSALWQATDAFSLAGSYHYQKVNVDD--- 268
Cdd:COG4772   175 RTHASVGGTVGN-FGYLVEYSRKRGDGFRDNSGF------DIND-----FNAKLGYRLSDRQELTLKFQYYDEDANTpgg 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 269 --RQAANEaftgDEYQASHRFPQFmEGKWHLYGIDAEYQF-DTATLTASVNRYDYETVTASDQTdlFLSYYDAGSGYFSS 345
Cdd:COG4772   243 ltDAQFDA----DPRQSYRPADQF-DTRRTQLSLRYEHQLsDNTTLTTTAYYNDFSRNWYIRQN--TADPNTPGLGLRGN 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 346 YDDFIGVGagnvevkkdsAEIRLASD---NDQPLRWLIGGFYSQDDLDvliaDFLP-GFADFWEENRPLDLDYIatqsET 421
Cdd:COG4772   316 PRGYRSYG----------IEPRLTHRfelGGVPHTLEVGLRYHREEED----RKQYvNTYGQGRSGAGLRRDRR----FS 377

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 422 LKEFSTFGELSYDLTAQWEVTLGARHFRYDDKLDSCYALFPLEEGETeipldcsasDDVQTGTLGKFSTRYRFTEQHQAY 501
Cdd:COG4772   378 ADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDSG---------SNSYSEFLPGLGLLYQLTDNLQLY 448

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 502 FLVSEGYRRGGANLVPAGAEDYAAYDPDTALNYELGTKTAWFNqRLLVNAAVFYMDWKD--IQVQSYIEDFRATVNAGDA 579
Cdd:COG4772   449 ANVSRGFEPPTFGDLAYGNGGNPDLKPEKSWNYELGTRGRIGN-GLSAEVALFYIDYDNelGSCSAAGGDRSTFTNAGET 527

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 580 RSQGVELET----KAILSDRWSVNLGYSFTEAEltetvesITGSYENAYSGDRLPGSPKQQWNLGVSYAQpigeAALDAS 655
Cdd:COG4772   528 RHQGLELALdydlLKGGGLGLPLFAAYTYTDAE-------FTSDFGPVFAGNRLPYVPRHQLTAGLGYEH----GGWTAN 596

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 656 LQLSHIGDVYT-ALNDEFYN-YSRLDAYTTANARINVSL-RNWHFGAFVTNIANERGVTGIRTDEFYGergqfEYVTRPR 732
Cdd:COG4772   597 LNGRYVSEQFTdAANTVADGsFGKIPSYTVLDLSASYDFgKNLSLFAGVNNLFDKRYIASRAPNYAAG-----IRPGPPR 671

                         730
                  ....*....|
gi 1730667823 733 TVGVSARYQF 742
Cdd:COG4772   672 TVYAGLRLKF 681

ligand_gated_channel

cd01347

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...

56-742

3.11e-50

Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 186.50 E-value: 3.11e-50

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  56 SVTVITRLD----AINNLSDIAAQVPGFTVLDAGSRNPSSLTIRGLrfdevgdndfggDGGSVATYVDNIPLQG------ 125
Cdd:cd01347     1 SVSVITAEDiekqPATSLADLLRRIPGVSVTRGGGGGGSTISIRGF------------GPDRTLVLVDGLPLASsnygrg 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 126 ---FFVPPQFtlkdLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPdLSQSYVRLGAGISQTAESDdlNYDTDLVVNSPLT 202
Cdd:cd01347    69 vdlNTIPPEL----IERVEVLKGPSSALYGSGAIGGVVNIITKRP-TDEFGGSVTAGYGSDNSGS--SGGGGFDVSGALA 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 203 --DTVGLRLLLSQTENQGFIDnpyalTGPTKDINDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVDdrqaaneaFTGDE 280
Cdd:cd01347   142 ddGAFGARLYGAYRDGDGTID-----GDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDAD--------GPGGT 208

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 281 YQASHRFPQFMEGKWHLYGIDAEYQFDTATLTASVNRYDYETVTASDQtdlflsyYDAGSGYFSSYDDFIGvgagnvevk 360
Cdd:cd01347   209 LPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWT-------LRANLSYSYTDNDGDP--------- 272

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 361 kdsaEIRLASDNDQPLRWLIGGFYSQDDLDVLIADflpgfadfWEENRPLDLDYIA--------TQSETLKE--FSTFGE 430
Cdd:cd01347   273 ----LILNGGNNAAGGDLGRSGYSSERDTTQLGFD--------AGLNAPFGTGPVAhtltlgveYRREELDEkqTALYAQ 340

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 431 LSYDLTAQWEVTLGARHFRYDDKLDSCYALFPleegeteipldcsASDDVQTGTLGKFSTRYRFTEQHQAYFLVSEGYRR 510
Cdd:cd01347   341 DTIELTDDLTLTLGLRYDHYDQDSKDTIAGGT-------------TAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRA 407

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 511 GGANLVPAGAEDYAAY-------DPDTALNYELGTKTAWFNqRLLVNAAVFYMDWKDIQVQSYIEDFRAT----VNAGDA 579
Cdd:cd01347   408 PSLGELYGGGSHGGTAavgnpnlKPEKSKQYELGLKYDPGD-GLTLSAALFRIDIKNEIVSTPTNTGLGLvtvyVNGGKA 486

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 580 RSQGVELETKAILSDRWSVNLGYSFTEAELTETVESITgsyenaysGDRLPGSPKQQWNLGVSYAQPIGEaaLDASLQLS 659
Cdd:cd01347   487 RIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDGATT--------GNRLPGIPKHTANLGLDYELPDEG--LTAGGGVR 556

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 660 HIGDVYtALNDEFYNYSRLDAYTTANARINVSL-RNWHFGAFVTNIANERGVTGIRTDEFYGERgqfeYVTRPRTVGVSA 738
Cdd:cd01347   557 YRGKQY-ADTANGNNTVKVPGYTLVDLSASYQFtKNLTLRLGVNNLFDKDYYTSLSVRGSGLYG----YYGPGRTYYLSV 631


                  ....
gi 1730667823 739 RYQF 742
Cdd:cd01347   632 SYKF 635

TonB-siderophor

TIGR01783

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...

52-742

3.41e-45

Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 172.21 E-value: 3.41e-45

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  52 DVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDAGSRNP-SSLTIRGLrfdevgdndfggdggSVATYVDNIPLQGF 126
Cdd:TIGR01783   1 DIPQSVSVITRQEledqQAGSLSEALQRVPGVVVGGSGGTTQfGNITIRGF---------------GLEVDIDNVYLDGV 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 127 FV--PPQFTLKDL---QQVEVLRGPQGTLYGNASTGGLVRYVTAKP-DLSQSYVRLGAGIsqtaesdDLNYDTDLVVNSP 200
Cdd:TIGR01783  66 PLlsRGNLAIVDPamvERVEVLRGPASLLYGGSAPGGVINIVTKRPqDEPKGSVTFGAGT-------RSGYRTAFDLGGP 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 201 LTD--TVGLRLLLSQTENQGFIDNpyaltgptkdiNDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVDDRQAANEAFTG 278
Cdd:TIGR01783 139 LGAdgTFRGRLNGARQDGDSFYDG-----------AGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGG 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 279 DEYQ--ASHRFPQfmEGKWHLY--------GIDAEYQFDTaTLTASVNRYDYETVTASDQtdLFLSYYDAGSGYFssydd 348
Cdd:TIGR01783 208 TSGRdlSSDRYLG--TSSNRNYddreylsyGLSLEYQFND-VWTGKQNLRYSYFDTDSNQ--VQASGYSSDGGLF----- 277

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 349 fiGVGAGNVEVKKDSAEIRLASDNDQ-----PLRWLIGGFYSQDDLDVLIADFLP---------------GFADFWEENR 408
Cdd:TIGR01783 278 --GRSLTVVNVKQDRVQIDAGLDGEFetgpiEHDLLLGVSYGQRTTNRFNNTGYPsdniysltatssartDIGDSPKDRA 355

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 409 PLdldyiaTQSETLkefSTFGELSYDLTAQWEVTLGARHfrydDKLDScyalfpleegETEIPLDCSASDDVQTGTLGKF 488
Cdd:TIGR01783 356 LS------STTKAL---NGVALQRILLADKWTLTLGGRY----DSVDV----------KSNNGVAGSTGKRDDSQFTPSL 412

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 489 STRYRFTEQHQAYFLVSEGYRRGGANLVPAGAEDYAaYDPDTALNYELGTKTAWFNqRLLVNAAVFYMDwKDIQVQSYIE 568
Cdd:TIGR01783 413 GVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDI-LEPEKGKNYELGVRYDLGD-SLLATAALFRIT-KDNQLVQDPV 489

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 569 DFRATVNAGDARSQGVELETKAILSDRWSVNLGYSFTEAELTETVesitgsyENAYSGDRLPGSPKQQWNLGVSYAQPIG 648
Cdd:TIGR01783 490 NGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDT-------NGDTQGNTVPFVPKHTASLWASYAPPVG 562

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 649 EAALDASLQLSHIGDVYTALNdefyNYSRLDAYTTANARIN---VSLRNWHFGAFVTNIANERGVT-GIRTDEFYGergq 724
Cdd:TIGR01783 563 DNGLTLGGGVQYTGKAYVDGG----NTGKVPSYTVVDLSVRydlTKKKNLTLALNVNNLFDRDYYTsGYRWGPSAY---- 634

                         730
                  ....*....|....*...
gi 1730667823 725 fEYVTRPRTVGVSARYQF 742
Cdd:TIGR01783 635 -IYPGAPRTVGLSVSYDF 651

TonB_dep_Rec

pfam00593

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

295-741

7.20e-28

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 117.95 E-value: 7.20e-28

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 295 WHLYGIDAEYQFDTATLTASVNRYDYETVTASDQTDLFLSYYDAGSGY-FSSYDDFIGVGAGNVEVKKDSAEIRLASDND 373
Cdd:pfam00593  49 LYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSnSSGLSGAGDYLSDDRLYGLYGLDGDLELSLD 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 374 QPLRWLIGGFYSQDDLDVLIADFLPgfADFWEENRPLDLDYIATQSETlkeFSTFGELSYDLTAQWEVTLGARHFRYDDK 453
Cdd:pfam00593 129 LSHDLLLGVELRTAGLDYRRLDDDA--YDPYDPANPSSSSYSDTTTDS---YGLYLQDNIKLTDRLTLTLGLRYDHYSTD 203

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 454 LDScyalfpleegeteIPLDCSASDDVQTGTLGKFSTRYRFTEQHQAYFLVSEGYRR---------GGANLVPAGAEDYA 524
Cdd:pfam00593 204 GDD-------------GNGGGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRApslgelygsGSGGGGGAVAGGNP 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 525 AYDPDTALNYELGTKtaWFNQRLLVNAAVFYMDWKDIQVQSYIEDFRAT-----VNAGDARSQGVELETKAILSDRWSVN 599
Cdd:pfam00593 271 DLKPETSDNYELGLK--YDDGRLSLSLALFYIDIKNLITSDPDGPGLGGtvytyTNVGKARIRGVELELSGRLWGLGLSG 348

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 600 LGYSFTEAELTETVesitgsyenAYSGDRLPGSPKQQWNLGVSYAQPIGEAALDASLQLSHIGDVYTAlndEFYNYSRLD 679
Cdd:pfam00593 349 GGYTYTDADDDADA---------DDTGNPLPNVPRHTANLGLTYDFPLGGWGARLGARYVGSGERRYG---DAANTFKTP 416

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1730667823 680 AYTTANARINVSL-RNWHFGAFVTNIANERGVTGIRTDEFYGERgqfeYVTRPRTVGVSARYQ 741
Cdd:pfam00593 417 GYTLVDLSAGYRLnKNLTLRLGVNNLFDKYYKRYYSSGGGNLGG----YPGPGRTFYLGLSYK 475

TonB-hemin

TIGR01785

TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...

47-742

1.41e-22

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]

Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 102.86 E-value: 1.41e-22

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  47 DQRLQDVAGSVTVITRlDAI-----NNLSDIAAQVPGFTVLDAGSRNPSSLTIRGLrfdevgdndfggDGGSVATYVDNI 121
Cdd:TIGR01785  12 RQVLSEAPASVSVISG-EQIeskqaNNLADALNTVPGVDVTGGGRPPGQSINIRGL------------QDNRVLVVVDGA 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 122 PLQG---------FFVPPQFtlkdLQQVEVLRGPQGTLYGNASTGGLVRYVTAKP-DLSQSYVRLGAGISQTAESDDLNY 191
Cdd:TIGR01785  79 RQNYqrggahngsLFVDPEL----LKRIEIVKGPSSSLYGSGALGGVVAFRTKDAaDLLRPGQLFGGLAKLSYGSNNNSF 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 192 DTDLVVNSPLTDtvGLRLLLSQTENQGfidNPYALTGPTKDINDDKTEAVRLSAL-WQATDAFSLAGSYHYQKVnvdDRQ 270
Cdd:TIGR01785 155 GGSVAVAGRLDD--NLDALVAATYRDG---GNYRNGNKEEATNSAYVQKNLLAKLgWQLDDAQRLEFSYFTTEG---SLD 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 271 AANEAFTGDEY-QAShrfpqfmegKWHLYGIDAEYQFDTATLTASVNRYDYETVTASD-QTDLFLSYYDAGSGYFSSY-- 346
Cdd:TIGR01785 227 EAQNSGPGTEYvLGS---------SSTLLASSTRDRSATLTYNWTPEDNPWLDATASLyYNRTENDNDRSARGVGREEgy 297

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 347 -DDFIGVGAGNvevkkdsaEIRLASDNDQPLRWliGGFYSQDDLDVLIADflpgfadfweeNRPLDLDYIATQSETLKEF 425
Cdd:TIGR01785 298 qYTTYGATLQN--------TSRFDVASWSTLTY--GVDWMKDKRRTESFD-----------PNSVTTIVPNPPSAKEYFF 356

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 426 STFGELSYDLTA-QWEVTLGARHFRYDDKLDSCYALFPLEEGETEIpldcsasddvqtgtLGKFSTRYRFTEQHQAYFLV 504
Cdd:TIGR01785 357 GLFLQDNIPLLDdRLTLSAGLRYDHYKLSPKTTADTEAVDRSYSRW--------------SPSLGLSYKPVDWLTLYASY 422

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 505 SEGYRrgganlVPAGAEDYAAYD-----------------PDTALNYELGTK----TAWF-NQRLLVNAAVFYMDWKDI- 561
Cdd:TIGR01785 423 SQGFR------APSIDELYGTGDhpgtpggytfapnpnlkPETSKTWELGANlsfdNLLLdNDQLQFKVAYFYNDVKDFi 496

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 562 --------QVQSYIEDFRATVNAGDARSQGVELETKAILsDRWSVNLGYSFTEAELTETvesitgsyenaysGDRLPGSP 633
Cdd:TIGR01785 497 dltigvtdNVTAGMNNITQYVNIDGARIRGIEASASYDA-GLWATGLSYGYTIGKDQNT-------------NQWLSNIP 562

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 634 KQQWNLGVSYAQPigEAALDASLQLSHIGD---VYTALNDEFYNYSRLDAYTTANARInvslrNWHFGAF--------VT 702
Cdd:TIGR01785 563 PLKLVVTVGYRFP--DRRLDLGAKAAYYERqseSPTTEDVAANGLLTTPGYTVVDLYA-----TYQPNAVkgltvrfgVN 635

                         730       740       750       760
                  ....*....|....*....|....*....|....*....|
gi 1730667823 703 NIanergvtgirTDEFYGERGQFEYVTRPRTVGVSARYQF 742
Cdd:TIGR01785 636 NL----------TDRKYTPAQSVPGAGPGRNFKGSVKYQF 665

Plug

pfam07715

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...

49-158

2.98e-16

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.

Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 75.00 E-value: 2.98e-16

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  49 RLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDAGSRNPSSLTIRGLrfdevgdndfggDGGSVATYVDNIPL- 123
Cdd:pfam07715   1 DLRDTPGSVSVVTAEDiedqGATNLADALRGVPGVSVSSGGGGGGSSISIRGF------------GSNRVLVLVDGVPLn 68

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1730667823 124 -------QGFFVPPQftlkDLQQVEVLRGPQGTLYGNASTGG 158
Cdd:pfam07715  69 sggggsvDLNSIDPE----DIERVEVLKGPASALYGSGAIGG 106

BtuB

COG4206

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];

45-326

1.54e-15

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];

Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 77.60 E-value: 1.54e-15

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDAGSR-NPSSLTIRGLRFDevgdndfggdggSVATYVD 119
Cdd:COG4206     7 RLEQSKSDLTGSVTVIDAEElersGATSLADALRRVPGVQVSSSGGPgSAASISIRGLGSN------------QTLVLID 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 120 NIPL----QGFFVPPQFTLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKP-DLSQSYVRLGAGiSQTAESDDLNYDTD 194
Cdd:COG4206    75 GVPLndpsLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGkKGFKGSVSASYG-SFGTRRLSASLSGG 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 195 lvvnsplTDTVGLRLLLSQTENQGFidNPYALTGPTKDINDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVDDRQAANE 274
Cdd:COG4206   154 -------AGKFSYSLSASYRRSDGY--RYNDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDR 224

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1730667823 275 AFTGDeYQASHRFPQFMEGKWHLYGIDAEYQFDTATLTASVNRYDYETVTAS 326
Cdd:COG4206   225 NLRLS-LSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLS 275

PRK13483

ligand-gated channel protein;

48-662

3.51e-14

ligand-gated channel protein;

Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 76.35 E-value: 3.51e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  48 QRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDAGSRNPSSLTIRGLRFDEVGDNDFGGDGGSVATYVDNIPL 123
Cdd:PRK13483   45 QQIRDAPASISVITREDlenrFYRDLTDALLDVPGVVVTGGGDRTDISLRGMGSQYTLILVDGKRQSSRETRPNSDGPGV 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 124 QGFFVPPqftLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAK-PDLSQSYVRLGAGISQTAESDDLnYDTDLVVNSPL- 201
Cdd:PRK13483  125 EQAWTPP---LAAIERIEVIRGPMSSLYGSDAIGGVINIITRKvPNEWQGEVRLDTTLQENSDSGNV-YQANFFVNGPLi 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 202 TDTVGLRLllsqtenqgfidnpYAltGPTKDINDDKTEAVRLSALWQATDAFSLAGSyhyqkvnvDDRQAANEAFTGDEY 281
Cdd:PRK13483  201 KDLLGLQL--------------YG--QYTQREEDDIEGGYRDKDARSLTAKLALTPN--------EDHDIMLEVGTSNQE 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 282 QASHrfpqfmEGKWHLYGIDAEYQFDTATLTASVNRYDYETVTASDQtdlflSYYDagsgyFSSYDDFIgvgagNVEVKK 361
Cdd:PRK13483  257 RDST------VGKTVAPLAPGESCGRRGCPESSTTEYERSTVSLSHT-----GRWD-----FGTSDTYI-----QHEEFD 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 362 DSAEIRLASDNDQPLRWLI----------GGFYSQDDLDvliaDFlpgfadfwEENRPLDLDYIATqsetlKEFSTFGEL 431
Cdd:PRK13483  316 NKSREMKIKNTDFQSSLVAplgqehtltfGAAYNHQDLT----DE--------TSNQISDLTDISR-----TQWAVFSED 378

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 432 SYDLTAQWEVTLGArhfRYDdkldscyalfpleegeteipldcsasDDVQTGtlGKFSTR----YRFTEQHQAYFLVSEG 507
Cdd:PRK13483  379 EWRIADDFALTGGL---RLD--------------------------HDENFG--GHVSPRvygvWNLAPSWTVKGGVSTG 427

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 508 YRR-------GGANLVPAGAEDYAAYD--PDTALNYELGTKTAWFNqRLLVNAAVFYMDWKD---------IQVQSYIED 569
Cdd:PRK13483  428 FRApslrqttPDWGQVSRGGNIYGNPDlkPETSLNKELGLYYDLGS-GLTASLTVFYNEFKDkitrvacpaTQCTDGPNQ 506

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 570 FRAT----VNAGDARSQGVELETKAILSDRWSVNLGYSFTEAeltetvESITGsyenAYSGDRLPGSPKQQWNLGVSYaQ 645
Cdd:PRK13483  507 FGADpttyVNIDEAVTQGVEASLSYPITSTLSLSGNYTYTDS------EQKSG----AYKGSPLNQLPKHLFQASLNW-E 575

                         650
                  ....*....|....*..
gi 1730667823 646 PIgeAALDASLQLSHIG 662
Cdd:PRK13483  576 PT--DRLNSWARVNYRG 590

PRK09840

catecholate siderophore receptor Fiu; Provisional

427-648

1.72e-12

catecholate siderophore receptor Fiu; Provisional

Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 70.99 E-value: 1.72e-12

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 427 TFGELSYD---LTAQWEVTLGARHFRYDDKLDSCYALFPLEEGETEIPLDCS-----ASDDVQT-GTL--GKFSTRYRFT 495
Cdd:PRK09840  446 TFAIYAFDtlqLTRDWELNGGIRLDNYHTEYDSATACGGSGRGAITCPAGVAkgspvTTVDTAKsGNLvnWKAGALYKLT 525

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 496 EQHQAY--FLVSEgYRRGGAN--LVPAGAEDYAA---YDPDTALNYELGTKTAWFNQRLLVNAAVFYMDWKDIQVQSYIE 568
Cdd:PRK09840  526 ENGNVYinYAVSQ-QPPGGSNfaLAQSGSGNSANrtdFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDG 604

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 569 DFRATvnaGDARSQGVELETKAILSDRWSVNLGYSFTEAELTEtvesitGSYENAYSGDRLPGSPKQQWNLGVSYAQPIG 648
Cdd:PRK09840  605 TYSQY---GKKRVEGYELSVAGNITPAWQVIAGYTQQKATVKN------GKDVAQDGSSSLPYTPEHAFTLWSQYQATDD 675

PRK10044

ferrichrome outer membrane transporter; Provisional

45-692

4.97e-12

ferrichrome outer membrane transporter; Provisional

Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 69.40 E-value: 4.97e-12

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITR----LDAINNLSDIAAQVPGFTVLDAGSRNP-SSLTIRGLRFDEVgdndfggdggSVATYVD 119
Cdd:PRK10044   71 KTDTPIEKTPQSISVVTAeemaLHQPKSVKEALSYTPGVSVGTRGASNTyDHLIIRGFAASGQ----------SQNNYLD 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 120 NIPLQG-----FFVPPQFtlkdLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPdlsqsyvrlgagisqTAEsddlnydtd 194
Cdd:PRK10044  141 GLKLQGnfyndAVIDPYM----LERAELMRGPVSVLYGKSNPGGLLNMVSKRP---------------TTE--------- 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 195 lvvnsPL--------TDTvglrllLSQTenqGFiDNPYAltgptkdINDDKTEAVRLSALWQATDA---------FSLAG 257
Cdd:PRK10044  193 -----PLkevqfkmgTDN------LFQT---GF-DFSDA-------LDDDGVYSYRLTGLARSANAqqkgseeqrYAIAP 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 258 SYHYQKvnvDDRQA-------ANEAFTG-----------DEYQASHRFP-QFMEG--------KWHLYGIDAEYQFDTaT 310
Cdd:PRK10044  251 SFTWRP---DDKTNftflsyfQNEPETGyygwlpkegtvEPLPNGKRLPtDFNEGaknntysrNEKMVGYSFDHEFND-T 326

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 311 LTASVN-RYdyetvtaSDQTDLFLSYYdaGSGYFSSYDDFI--GVGAGNVEVKKDSAEIRLAS-----DNDQPLrwLIGG 382
Cdd:PRK10044  327 FTVRQNlRY-------AENKTSQRSVY--GYGVCSDKGHYLnrGYVVDDEKLQNFSVDTQLQSkfatgDVDHTL--LTGV 395

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 383 FY--SQDDLDVLI--ADFLPGFADFWEENRPLDLDYIATQSETLKEFSTFGELSYDlTAQWE---VTLGArhfRYDDKLD 455
Cdd:PRK10044  396 DFmrMRNDINAWFgyADSVPLLNLYGPVNTDFDFNANSGPYQILNKQKQTGLYVQD-QAEWDkwlVTLGG---RYDWADQ 471

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 456 SCYAlfpLEEGETeipldcSASDDVQtgtlgkFSTR----YRFTEQHQAYFLVSEGYrrgganlVPAGAEDYA--AYDPD 529
Cdd:PRK10044  472 SSLN---RVNGTT------DKRDDKQ------FTWRggvnYLFDNGITPYFSYSESF-------EPSSGTGKDgnIFAPS 529

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 530 TALNYELGTKTAWFNQRLLVNAAVFYMDwKDIQVQSYIEDFRATVNAGDARSQGVELETKAILSDRWSVNLGYSFTEAEL 609
Cdd:PRK10044  530 KGKQYEAGVKYVPKDRPIVVTGAVYQLT-KTNNLTADPENSFFSVQGGEIRARGVELEAKAALSANVNVTGSYTYTDAEY 608

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 610 TEtvesitgsyENAYSGDRLPGSPKQQWNLGVSYAqpIGEAALdASLQLS----HIGDVYTALNDEFynysRLDAYTTAN 685
Cdd:PRK10044  609 TT---------DTTYKGNTPAQVPKHMASLWADYT--FFDGPL-SGLTLGtggrYTGSSYGDPANSF----KVGSYTVVD 672


                  ....*..
gi 1730667823 686 ARINVSL 692
Cdd:PRK10044  673 ALVKYDL 679

PRK13513

ligand-gated channel protein;

48-221

1.02e-09

ligand-gated channel protein;

Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 61.71 E-value: 1.02e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  48 QRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDAGSRnpSSLTIRGL--RFDEVGDNDFGGDGGSVATYVDNI 121
Cdd:PRK13513   47 QRIQDAPASISVVTREQlenkAYRDVTDALKDVPGVVVTGGGST--SDISIRGMaaKYTLILVDGKRVDTRSTRPNSDGS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 122 PLQGFFVPPqftLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAK-PDLSQSYVRLGAGISQTAESDDLnYDTDLVVNSP 200
Cdd:PRK13513  125 GIEQGWLPP---LAAIERIEVVRGPMSSLYGSDAMGGVINIITRKvQKEWHGSLRADATLQEDSKSGDI-FQTNAYASGP 200

                         170       180
                  ....*....|....*....|....
gi 1730667823 201 LTDTV-GLRL--LLSQTENQGFID 221
Cdd:PRK13513  201 LIDGLlGLKVsgLLSHRSEDKIID 224

PRK13484

IreA family TonB-dependent siderophore receptor;

48-209

9.95e-09

IreA family TonB-dependent siderophore receptor;

Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 58.87 E-value: 9.95e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  48 QRLQDVAGSVTVITR----LDAINNLSDIAAQVPGFTVldAGSRNPSSLTIRGLRFDEVGDNDFGGDGGSVATYVDNIP- 122
Cdd:PRK13484   42 QQLRNAPASVSVITSeqlqKKPVSDLVDAVKDVEGISI--TGGNEKPDISIRGLSGDYTLILVDGRRQSGRESRPNGSGg 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 123 LQGFFVPPqftLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTaKPDLSQSY---VRLGAGISQTAESDDlNYDTDLVVNS 199
Cdd:PRK13484  120 FEAGFIPP---VEAIERIEVIRGPMSSLYGSDAIGGVINIIT-KPVNNQTWdgvLGLGGIIQEHGKFGN-STTNDFYLSG 194

                         170
                  ....*....|.
gi 1730667823 200 PLT-DTVGLRL 209
Cdd:PRK13484  195 PLIkDKLGLQL 205

PRK13486

TonB-dependent receptor;

47-608

1.26e-08

TonB-dependent receptor;

Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 58.49 E-value: 1.26e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  47 DQRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDA-GSRNPSSLTIRGL--RFDEVGDNDFGGDGGSVATYVD 119
Cdd:PRK13486   36 EKKLTNAAASVSVISQEElqssQYHDLAEALRSVEGVDVESGtGKTGGLEISIRGMpaSYTLILIDGVRQGGSSDVTPNG 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 120 NIPLQGFFVPPqftLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAK-PDLSQSYVRLGAGISQT---AESDDLNYDTdl 195
Cdd:PRK13486  116 FSAMNTGFMPP---LAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKnADKWLSSVNAGLNLQESnkwGNSSQFNFWS-- 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 196 vvNSPLT-DTVGLRLLLSQTENQGFIDNPYALTGPTKDINDDKTEAVRLSAL--WQATDAFSLAGSYHYQKVNVDDRQAA 272
Cdd:PRK13486  191 --SGPLVdDSVSLQVRGSTQQRQGSSVTSLSDTAATRIPYPTESQNYNLGARldWKASEQDVLWFDMDTTRQRYDNRDGQ 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 273 NEAFTGDeYQASHRFpqfmEGKWHLYGIDAEYQFdtATLTASVNRYDYE--------TVTASDQTDLflsyydagsgyfs 344
Cdd:PRK13486  269 LGSLTGG-YDRTLRY----ERNKISAGYDHTFTF--GTWKSYLNWNETEnkgrelvrSVLKRDKWGL------------- 328

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 345 syddfigvgAGNVEVKKDSAEIrLASDNDQPL----RWLIGGFYsqddldvliadflpgfadfwEENRPLDLDYIATQSE 420
Cdd:PRK13486  329 ---------AGQPRELKESNLI-LNSLLLTPLgeshLVTVGGEF--------------------QSSSMKDGVVLASTGE 378

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 421 TL--KEFSTFGELSYDLTAQWEVTLGARHFRYDdkldscyaLFpleeGETEIPLDCSASDDVQTGTL-GKFSTRYRFTEQ 497
Cdd:PRK13486  379 TFrqKSWSVFAEDEWHLTDALALTAGSRYEHHE--------QF----GGHFSPRAYLVWDVADAWTLkGGVTTGYKAPRM 446

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 498 HQAYFLVSEGYRRGGANLVpaGAEDyaaYDPDTALNYELGTktaWFNQRLLVNAAV--FYMDWKDIQVQSYIED-FRATV 574
Cdd:PRK13486  447 GQLHKGISGVSGQGKTNLL--GNPD---LKPEESVSYEAGV---YYDNPAGLNANVtgFMTDFSNKIVSYSINDnTNSYV 518

                         570       580       590
                  ....*....|....*....|....*....|....*
gi 1730667823 575 NAGDARSQGVELETK-AILSDRWSVNLGYSFTEAE 608
Cdd:PRK13486  519 NSGKARLHGVEFAGTlPLWSEDVTLSLNYTWTRSE 553

PRK10064

catecholate siderophore receptor CirA; Provisional

47-335

7.54e-07

catecholate siderophore receptor CirA; Provisional

Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 52.58 E-value: 7.54e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  47 DQRLQDVAGSVTVITRLD----AINNLSDIAAQVPGFTVLDAGSrNPSSLTIRGLRFDEVGDNDFGGDGGSVATYVDNIP 122
Cdd:PRK10064   41 EQNLKDAPASISVITQEDlqrkPVQNLKDVLKEVPGVQLTNEGD-NRKGVSIRGLDSSYTLILIDGKRVNSRNAVFRHND 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 123 LQGFFVPpqftLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKpdLSQSY---VRLGAGISQTAESDDlNYDTDLVVNS 199
Cdd:PRK10064  120 FDLNWIP----VDAIERIEVVRGPMSSLYGSDALGGVVNIITKK--IGQKWhgtVTVDTTIQEHRDRGD-TYNGQFFTSG 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 200 PLTDTV-GLRLL--LSQTENQGFIDNPYALTGPTKDINDDKTEAVRLSALWQATDAFSLAGSYHYQKVNVDDRQAANEAF 276
Cdd:PRK10064  193 PLIDGVlGMKAYgsLAKREKDDPQNSTTTDTGETPRIEGFTSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRL 272

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1730667823 277 TGDEYQASHRfpqfmeGKWHL-------YG--IDAEYQFDTATLTASVNRYDYETVTASDQTDLFLSY 335
Cdd:PRK10064  273 ERQNYSLSHN------GRWDYgnselkyYGekVENKNPGNSSPITSESNSIDGKYTLPLTAINQFLTF 334

TonB-B12

TIGR01779

TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ...

45-347

8.83e-07

TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]

Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 52.17 E-value: 8.83e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVagsvTVITRLD----AINNLSDIAAQVPGFTVLDAGSRNP-SSLTIRGLRFDEVGdndfggdggsvaTYVD 119
Cdd:TIGR01779  41 TASQTLAPV----TIITRQDiertQAKSLPELLRRLPGVSIAQNGGRGQnTSLFLRGTESDHVL------------VLID 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 120 NIPL----QGFFVPPQFTLKDLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPDLSQ-SYVRLGAGISQTaesddLNYDTD 194
Cdd:TIGR01779 105 GIRFgsaaAGAADFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQgTTLSAGLGSLDY-----QEYSIA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 195 LVVNSPltDTVGLRLLLSQTENQGFidNPYALTGPTKDINDD--KTEAVRLSALWQATDAFSLAGS-YHYQKVNVDDrqa 271
Cdd:TIGR01779 180 SGVAIG--ENGWYSVALGTESTKGI--NVRPGGPGVYDPDRDgfRSDSLLLGGGHRFDESWSLFVNaLRYENRNDYD--- 252

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1730667823 272 aNEAFTGDEYQASHRFPQFMEGKWHLYGidaeyQFDTATLTASVNRydyetvtasdQTDLFLSYYDAgsGYFSSYD 347
Cdd:TIGR01779 253 -NYSFGTRLYKEAEKGDQSFTGGRQRQS-----ERDVSELTLSTGK----------SKDWDYAYSKG--RYSSTSD 310

PRK10003

ferric-rhodotorulic acid outer membrane transporter; Provisional

527-742

9.51e-07

ferric-rhodotorulic acid outer membrane transporter; Provisional

Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 52.18 E-value: 9.51e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 527 DPDTALNYELGTKTAWFNQRLLVNAAVFYMDWKDIQVQSYI-----------EDFRATVnagdarSQGVELETKAILSDR 595
Cdd:PRK10003  530 APITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQSTGTpipgsngetayKAVDGTV------SKGVEFELNGAITDN 603

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 596 WSVNLGYSFTEAELTETvesitgsyeNAYSgdrlPGSPKQQWNLGVSYAQP------IGEAALDASLQLSHIGDVYTALN 669
Cdd:PRK10003  604 WQLTFGATRYIAEDNEG---------NAVN----PNLPRTTVKLFTRYRLPvmpeltVGGGVNWQNRVYTDTVTPYGTFR 670

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1730667823 670 DEFYNYSRLDAYTTANARINVSLRnwhfgAFVTNIANERGVTGIRTDEFYGErgqfeyvtrPRTVGVSARYQF 742
Cdd:PRK10003  671 AEQGSYALVDLFTRYQVTKNFSVQ-----GNVNNLFDKTYDTNVEGSIVYGA---------PRNFSITATYQF 729

PRK14050

TonB-dependent siderophore receptor;

45-712

3.53e-06

TonB-dependent siderophore receptor;

Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 50.57 E-value: 3.53e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823  45 KRDQRLQDVAGSVTVITR--LD---AINNLSDIAAQVPGFTVLDAGSRNPSS-LTIRGlrFDevgdndfggdGGSVATYV 118
Cdd:PRK14050   71 KTDTPITEIPQSVSVVGRqeMDdrgVTNKVDEALRYTPGVLSQPFGTDGDTDwFYIRG--FD----------ATQTGVFL 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 119 DNIPL-----QGFFVPPQFtlkdLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPdLSQSYVRLGAGIsqtaeSDDLNYDT 193
Cdd:PRK14050  139 DGLNLfsygfGGFQIDPFM----LERVEVLKGPASVLYGGSNPGGIVNMVSKRP-LDEPLYYTEIGI-----NSYGNAFT 208

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 194 DLVVNSPLTD--TVGLRLLLSQTENQGFIDNPYALTG---PTKDINDDKTEAVRLSALWQATDAFSLAGSY-HYQKVNVD 267
Cdd:PRK14050  209 GFDVGDKLSDdgTVRYRVTGKVAGGDNYSDYSEDLRGfimPQITYAPDDATSLTVYGYLSGLDQVHVGNGFlPYVGTVVD 288

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 268 ------DRqaanEAFTGDEYQASHRFPQFMegkwhlYGIDAEYQFDTATLTASVNRYDYetVTASDQTDLFLSYYDAGSG 341
Cdd:PRK14050  289 apfgkiDR----DAFYGEPDIDNGSYAQQM------LGYEFSHEFDNGWTFSQNARYGH--LHKHEKGPYTYGYVGGATG 356

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 342 YFS-SYDDF----IGVgAGNVEVKKDSAEIRLASDND------QPLRWLIGGFYSQDDL-----DVLIADFLPGFADFWE 405
Cdd:PRK14050  357 LPDpTGPDYmlnrIGF-EHRSKVDSFSIDNRLEGEFDtgalthNLLFGLDYKYYRLDQVqaccgATPISATNPVYGTTQG 435

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 406 ENRPLdLDYIATQsetlKEFSTFGELSYDLTAQWEVTLGARHFRYDDKLDScyalfpleegetEIPLDCSASDDVQTGTL 485
Cdd:PRK14050  436 ANFVY-LDQILTQ----QQIGIYAQDQIRFGDGWLVTLNGRYDYVDTDSDA------------RIGTSYESNDGALSGRA 498

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 486 GkfsTRYRFTEQHQAYFLVSEGYRrggaNLVPAGAEDYAAyDPDTALNYELGTK--TAWFNQrlLVNAAVFYMDWKDIQV 563
Cdd:PRK14050  499 G---LAYEFDNGLTPYVSAATFFN----PLVGTLASGPPL-KPEEGEQYEAGIKyePSFIDG--LITASVFQITKKNVTV 568

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 564 QSyiEDFRATVNAGDARSQGVELETKAILSDRWSVNLGYSFTEAELTETVESitgsyenAYSGDRLPGSPKQQWNLGVSY 643
Cdd:PRK14050  569 TD--PLTFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDANP-------SLIGNSPYLVPETQASLWLDY 639

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1730667823 644 AQPIGE---AALDASLQlsHIGDVYTalnDEfYNYSRLDAYTTANARINVSLRNWHFGAFVTNIANERGVTG 712
Cdd:PRK14050  640 AVTDGAfegVSLGAGVR--YQGESWA---DE-ANTLKVPAATLFDAAIRYEKNDWGASLNVANLFDKEYVAG 705

PRK13524

FepA family TonB-dependent siderophore receptor;

128-234

8.52e-04

FepA family TonB-dependent siderophore receptor;

Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 42.71 E-value: 8.52e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730667823 128 VPPQFtlkdLQQVEVLRGPQGTLYGNASTGGLVRYVTAKPDlsqsyvrlgagiSQTAESDDLNYD------------TDL 195
Cdd:PRK13524  141 VPPEM----IERIEVLRGPAAARYGNGAAGGVVNIITKKPT------------GEWHGSWNTYFNapehkaegatkrTNF 204

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1730667823 196 VVNSPLTDTVGLRLL--LSQTE------NQGFIDNP---YALTGPT-------KDIN 234
Cdd:PRK13524  205 SLSGPLGDELSFRLYgnLNKTQadawdiNQGHQSARtgsYAGTLPAgregvinKDIN 261

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01