NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1717251416|gb|QDX22759|]
View 

glutathione S-transferase [Pandoraea pnomenusa]

Protein Classification

glutathione S-transferase( domain architecture ID 10600525)

glutathione S-transferase (GST) catalyzes the conjugation of reduced glutathione to a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

CATH:  3.40.30.10
EC:  2.5.1.18
Gene Ontology:  GO:0006749|GO:0043295
SCOP:  4000976|4000472

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
GST_C_6 cd03205
C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; ...
91-203 5.51e-34

C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs, including Pseudomonas fluorescens GST with a known three-dimensional structure. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Though the three-dimensional structure of Pseudomonas fluorescens GST has been determined, there is no information on its functional characterization.


:

Pssm-ID: 198314 [Multi-domain]  Cd Length: 109  Bit Score: 116.92  E-value: 5.51e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  91 ALRLTGLALAACEKSVQLVYERELRPSEKRHSPWTDRVRTQLHAAFQALELELAQVPlvatPDQIGEHGVTVAVAWRFHQ 170
Cdd:cd03205     1 ALRLEALADGICDAAVLIVYERRLRPEEKQHQPWIERQWGKIERALDALEAELGDLP----GGRLTLGDIAVACALGYLD 76
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1717251416 171 LMLPEIDFGDQFPELANFSAQAEALPAFRETPP 203
Cdd:cd03205    77 FRFPELDWRAGHPALAAWFARFEARPSFQATPP 109
GST_N_3 pfam13417
Glutathione S-transferase, N-terminal domain;
3-78 9.37e-26

Glutathione S-transferase, N-terminal domain;


:

Pssm-ID: 433190 [Multi-domain]  Cd Length: 75  Bit Score: 94.60  E-value: 9.37e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1717251416   3 LIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFRTFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLESLVDAER 78
Cdd:pfam13417   1 LYGFPGSPYARRVRIALNEKGLPYEFVPIPPGDHPPELLAKNPLGKVPVLE-DDGGILCESLAIIDYLEELYPGPP 75
 
Name Accession Description Interval E-value
GST_C_6 cd03205
C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; ...
91-203 5.51e-34

C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs, including Pseudomonas fluorescens GST with a known three-dimensional structure. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Though the three-dimensional structure of Pseudomonas fluorescens GST has been determined, there is no information on its functional characterization.


Pssm-ID: 198314 [Multi-domain]  Cd Length: 109  Bit Score: 116.92  E-value: 5.51e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  91 ALRLTGLALAACEKSVQLVYERELRPSEKRHSPWTDRVRTQLHAAFQALELELAQVPlvatPDQIGEHGVTVAVAWRFHQ 170
Cdd:cd03205     1 ALRLEALADGICDAAVLIVYERRLRPEEKQHQPWIERQWGKIERALDALEAELGDLP----GGRLTLGDIAVACALGYLD 76
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1717251416 171 LMLPEIDFGDQFPELANFSAQAEALPAFRETPP 203
Cdd:cd03205    77 FRFPELDWRAGHPALAAWFARFEARPSFQATPP 109
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-203 4.54e-32

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 114.99  E-value: 4.54e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFR---TFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLESLVDaE 77
Cdd:COG0625     2 MKLYGSPPSPNSRRVRIALEEKGLPYELVPVDLAKgeqKSPEFLALNPLGKVPVLV-DDGLVLTESLAILEYLAERYP-E 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  78 RRLVPMAPEARLRALRLTGLALAACEKSVQLVYEReLRPseKRHSPWTDRVRTQLHAAFQALELELAQVPLVAtpdqiGE 157
Cdd:COG0625    80 PPLLPADPAARARVRQWLAWADGDLHPALRNLLER-LAP--EKDPAAIARARAELARLLAVLEARLAGGPYLA-----GD 151
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1717251416 158 H----GVTVAVAWRFHQLMlpEIDFgDQFPELANFSAQAEALPAFRETPP 203
Cdd:COG0625   152 RfsiaDIALAPVLRRLDRL--GLDL-ADYPNLAAWLARLAARPAFQRALA 198
GST_N_3 pfam13417
Glutathione S-transferase, N-terminal domain;
3-78 9.37e-26

Glutathione S-transferase, N-terminal domain;


Pssm-ID: 433190 [Multi-domain]  Cd Length: 75  Bit Score: 94.60  E-value: 9.37e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1717251416   3 LIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFRTFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLESLVDAER 78
Cdd:pfam13417   1 LYGFPGSPYARRVRIALNEKGLPYEFVPIPPGDHPPELLAKNPLGKVPVLE-DDGGILCESLAIIDYLEELYPGPP 75
PRK10357 PRK10357
putative glutathione S-transferase; Provisional
1-145 2.20e-19

putative glutathione S-transferase; Provisional


Pssm-ID: 182405 [Multi-domain]  Cd Length: 202  Bit Score: 81.69  E-value: 2.20e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFRTFDEFSAINPVVKAPTLVADDGTVLMDSTLILQYLEsLVDAERRL 80
Cdd:PRK10357    1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIE-LLNVAPAM 79
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1717251416  81 VPMAPEARLRALRLTGLALAACEKSVQLVYErELRPSEKRHSPWTDRVRTQLHAAFQALELELAQ 145
Cdd:PRK10357   80 LPRDPLAALRVRQLEALADGIMDAALVSVRE-QARPAAQQSEDELLRQREKINRSLDALEGYLVD 143
GST_N_family cd00570
Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic ...
1-71 2.60e-14

Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxin 2 and stringent starvation protein A.


Pssm-ID: 238319 [Multi-domain]  Cd Length: 71  Bit Score: 64.90  E-value: 2.60e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVF-RTFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLE 71
Cdd:cd00570     1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGeGEQEEFLALNPLGKVPVLE-DGGLVLTESLAILEYLA 71
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
14-203 9.60e-11

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 58.88  E-value: 9.60e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  14 RVAICLKLLGLPYEHRSLSVFRTF----DEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLESlVDAERRLVPMAPEARL 89
Cdd:TIGR01262  13 RVRIALALKGIDYEYVPVNLLRDGeqrsPEFLALNPQGLVPTLD-IDGEVLTQSLAIIEYLEE-TYPDPPLLPADPIKRA 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  90 RALRLTglALAACE------KSVQLVYERELRPSEKRHSPWTDRVRTQLHAAFQAL------------ELELAQVPLVAt 151
Cdd:TIGR01262  91 RVRALA--LLIACDihplnnLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALlqphagrfcvgdTPTLADLCLVP- 167
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1717251416 152 pdqigehgvTVAVAWRFHQLMlpeidfgDQFPELANFSAQAEALPAFRETPP 203
Cdd:TIGR01262 168 ---------QVYNAERFGVDL-------TPYPTLRRIAAALAALPAFQRAHP 203
 
Name Accession Description Interval E-value
GST_C_6 cd03205
C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; ...
91-203 5.51e-34

C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs, including Pseudomonas fluorescens GST with a known three-dimensional structure. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Though the three-dimensional structure of Pseudomonas fluorescens GST has been determined, there is no information on its functional characterization.


Pssm-ID: 198314 [Multi-domain]  Cd Length: 109  Bit Score: 116.92  E-value: 5.51e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  91 ALRLTGLALAACEKSVQLVYERELRPSEKRHSPWTDRVRTQLHAAFQALELELAQVPlvatPDQIGEHGVTVAVAWRFHQ 170
Cdd:cd03205     1 ALRLEALADGICDAAVLIVYERRLRPEEKQHQPWIERQWGKIERALDALEAELGDLP----GGRLTLGDIAVACALGYLD 76
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1717251416 171 LMLPEIDFGDQFPELANFSAQAEALPAFRETPP 203
Cdd:cd03205    77 FRFPELDWRAGHPALAAWFARFEARPSFQATPP 109
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-203 4.54e-32

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 114.99  E-value: 4.54e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFR---TFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLESLVDaE 77
Cdd:COG0625     2 MKLYGSPPSPNSRRVRIALEEKGLPYELVPVDLAKgeqKSPEFLALNPLGKVPVLV-DDGLVLTESLAILEYLAERYP-E 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  78 RRLVPMAPEARLRALRLTGLALAACEKSVQLVYEReLRPseKRHSPWTDRVRTQLHAAFQALELELAQVPLVAtpdqiGE 157
Cdd:COG0625    80 PPLLPADPAARARVRQWLAWADGDLHPALRNLLER-LAP--EKDPAAIARARAELARLLAVLEARLAGGPYLA-----GD 151
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1717251416 158 H----GVTVAVAWRFHQLMlpEIDFgDQFPELANFSAQAEALPAFRETPP 203
Cdd:COG0625   152 RfsiaDIALAPVLRRLDRL--GLDL-ADYPNLAAWLARLAARPAFQRALA 198
GST_N_3 pfam13417
Glutathione S-transferase, N-terminal domain;
3-78 9.37e-26

Glutathione S-transferase, N-terminal domain;


Pssm-ID: 433190 [Multi-domain]  Cd Length: 75  Bit Score: 94.60  E-value: 9.37e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1717251416   3 LIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFRTFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLESLVDAER 78
Cdd:pfam13417   1 LYGFPGSPYARRVRIALNEKGLPYEFVPIPPGDHPPELLAKNPLGKVPVLE-DDGGILCESLAIIDYLEELYPGPP 75
PRK10357 PRK10357
putative glutathione S-transferase; Provisional
1-145 2.20e-19

putative glutathione S-transferase; Provisional


Pssm-ID: 182405 [Multi-domain]  Cd Length: 202  Bit Score: 81.69  E-value: 2.20e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFRTFDEFSAINPVVKAPTLVADDGTVLMDSTLILQYLEsLVDAERRL 80
Cdd:PRK10357    1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIE-LLNVAPAM 79
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1717251416  81 VPMAPEARLRALRLTGLALAACEKSVQLVYErELRPSEKRHSPWTDRVRTQLHAAFQALELELAQ 145
Cdd:PRK10357   80 LPRDPLAALRVRQLEALADGIMDAALVSVRE-QARPAAQQSEDELLRQREKINRSLDALEGYLVD 143
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
9-73 6.73e-17

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 71.51  E-value: 6.73e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1717251416   9 SPYVRRVAICLKLLGLPYEHRSLSV--FRTFDEFSAINPVVKAPTLVADDGTVLMDSTLILQYLESL 73
Cdd:pfam13409   2 SPFSHRVRLALEEKGLPYEIELVDLdpKDKPPELLALNPLGTVPVLVLPDGTVLTDSLVILEYLEEL 68
GST_N_family cd00570
Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic ...
1-71 2.60e-14

Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxin 2 and stringent starvation protein A.


Pssm-ID: 238319 [Multi-domain]  Cd Length: 71  Bit Score: 64.90  E-value: 2.60e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVF-RTFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLE 71
Cdd:cd00570     1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGeGEQEEFLALNPLGKVPVLE-DGGLVLTESLAILEYLA 71
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
14-203 9.60e-11

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 58.88  E-value: 9.60e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  14 RVAICLKLLGLPYEHRSLSVFRTF----DEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLESlVDAERRLVPMAPEARL 89
Cdd:TIGR01262  13 RVRIALALKGIDYEYVPVNLLRDGeqrsPEFLALNPQGLVPTLD-IDGEVLTQSLAIIEYLEE-TYPDPPLLPADPIKRA 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  90 RALRLTglALAACE------KSVQLVYERELRPSEKRHSPWTDRVRTQLHAAFQAL------------ELELAQVPLVAt 151
Cdd:TIGR01262  91 RVRALA--LLIACDihplnnLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALlqphagrfcvgdTPTLADLCLVP- 167
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1717251416 152 pdqigehgvTVAVAWRFHQLMlpeidfgDQFPELANFSAQAEALPAFRETPP 203
Cdd:TIGR01262 168 ---------QVYNAERFGVDL-------TPYPTLRRIAAALAALPAFQRAHP 203
GST_N_4 cd03056
GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with ...
1-70 4.11e-10

GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239354 [Multi-domain]  Cd Length: 73  Bit Score: 53.73  E-value: 4.11e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVF----RTfDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYL 70
Cdd:cd03056     1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILkgetRT-PEFLALNPNGEVPVLE-LDGRVLAESNAILVYL 72
GST_N_Delta_Epsilon cd03045
GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved ...
1-70 1.06e-09

GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 239343 [Multi-domain]  Cd Length: 74  Bit Score: 52.99  E-value: 1.06e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFR---TFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYL 70
Cdd:cd03045     1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKgehLKPEFLKLNPQHTVPTLV-DNGFVLWESHAILIYL 72
GST_N_3 cd03049
GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with ...
1-71 5.59e-09

GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239347 [Multi-domain]  Cd Length: 73  Bit Score: 50.72  E-value: 5.59e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1717251416   1 MQLIGMLDSPYVR--RVAICLKLLGLPYE-HRSLSVFRTfDEFSAINPVVKAPTLVADDGTVLMDSTLILQYLE 71
Cdd:cd03049     1 MKLLYSPTSPYVRkvRVAAHETGLGDDVElVLVNPWSDD-ESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73
GST_N_2 cd03047
GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with ...
1-70 5.61e-09

GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.


Pssm-ID: 239345 [Multi-domain]  Cd Length: 73  Bit Score: 50.78  E-value: 5.61e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSL-SVFRTFD--EFSAINPVVKAPTLVaDDGTVLMDSTLILQYL 70
Cdd:cd03047     1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAgGQFGGLDtpEFLAMNPNGRVPVLE-DGDFVLWESNAILRYL 72
GST_N_GTT2_like cd03051
GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly ...
9-71 8.01e-09

GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 239349 [Multi-domain]  Cd Length: 74  Bit Score: 50.37  E-value: 8.01e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717251416   9 SPYVRRVAICL--KLLGLPY--------EHRSlsvfrtfDEFSAINPVVKAPTLVADDGTVLMDSTLILQYLE 71
Cdd:cd03051     9 APNPRRVRIFLaeKGIDVPLvtvdlaagEQRS-------PEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74
GST_N_Zeta cd03042
GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
14-71 3.32e-08

GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 239340 [Multi-domain]  Cd Length: 73  Bit Score: 48.72  E-value: 3.32e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1717251416  14 RVAICLKLLGLPYEHRSLSVFR---TFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLE 71
Cdd:cd03042    14 RVRIALNLKGLDYEYVPVNLLKgeqLSPAYRALNPQGLVPTLV-IDGLVLTQSLAIIEYLD 73
GST_N_Phi cd03053
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related ...
1-70 2.17e-07

GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 239351 [Multi-domain]  Cd Length: 76  Bit Score: 46.49  E-value: 2.17e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFR---TFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYL 70
Cdd:cd03053     2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKgehKSPEHLARNPFGQIPALE-DGDLKLFESRAITRYL 73
GST_N_Tau cd03058
GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
1-71 3.91e-07

GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin, responses to soil stresses and responses to auxin and cytokinin hormones.


Pssm-ID: 239356 [Multi-domain]  Cd Length: 74  Bit Score: 45.73  E-value: 3.91e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFRTFDEFSAINPVV-KAPTLVADDGTVLmDSTLILQYLE 71
Cdd:cd03058     1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVHkKIPVLLHNGKPIC-ESLIIVEYID 71
GST_N_Ure2p_like cd03048
GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related ...
9-70 5.30e-07

GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and Schizosaccharomyces pombe GST-I. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes.


Pssm-ID: 239346 [Multi-domain]  Cd Length: 81  Bit Score: 45.61  E-value: 5.30e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1717251416   9 SPYVRRVAICLKLLGLPYEHRSLS-----VFRtfDEFSAINPVVKAPTLVADDGT--VLMDSTLILQYL 70
Cdd:cd03048     9 TPNGFKVSIMLEELGLPYEIHPVDiskgeQKK--PEFLKINPNGRIPAIVDHNGTplTVFESGAILLYL 75
GST_N_GTT1_like cd03046
GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly ...
14-70 1.36e-06

GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 239344 [Multi-domain]  Cd Length: 76  Bit Score: 44.41  E-value: 1.36e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717251416  14 RVAICLKLLGLPYEHRSLSVFRTF---DEFSAINPVVKAPTLVaDDGTVLMDSTLILQYL 70
Cdd:cd03046    13 RILWLLEELGLPYELVLYDRGPGEqapPEYLAINPLGKVPVLV-DGDLVLTESAAIILYL 71
GST_N_etherase_LigE cd03038
GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas ...
9-71 7.68e-06

GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.


Pssm-ID: 239336 [Multi-domain]  Cd Length: 84  Bit Score: 42.72  E-value: 7.68e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1717251416   9 SPYVRRVAICLKLLGLPYEhrslSVFRTFDEFSAI------NPVVKAPTLVADDGTVLMDSTLILQYLE 71
Cdd:cd03038    16 SPNVWKTRLALNHKGLEYK----TVPVEFPDIPPIlgeltsGGFYTVPVIVDGSGEVIGDSFAIAEYLE 80
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
1-72 8.88e-06

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 42.29  E-value: 8.88e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1717251416   1 MQLIGMLDSPYVRRVAICLKLLGLPYEHRSLSV---FRTFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYLES 72
Cdd:pfam02798   3 LTLYGIRGSPRAHRIRWLLAEKGVEYEIVPLDFgagPEKSPELLKLNPLGKVPALE-DGGKKLTESRAILEYIAR 76
GST_N_Beta cd03057
GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
17-70 2.38e-05

GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.


Pssm-ID: 239355 [Multi-domain]  Cd Length: 77  Bit Score: 40.98  E-value: 2.38e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1717251416  17 ICLKLLGLPYEHRSLSvFRTF----DEFSAINPVVKAPTLVADDGTVLMDSTLILQYL 70
Cdd:cd03057    16 IALEELGLPFELVRVD-LRTKtqkgADYLAINPKGQVPALVLDDGEVLTESAAILQYL 72
PRK10542 PRK10542
glutathionine S-transferase; Provisional
38-92 4.53e-05

glutathionine S-transferase; Provisional


Pssm-ID: 182533 [Multi-domain]  Cd Length: 201  Bit Score: 42.36  E-value: 4.53e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1717251416  38 DEFSAINPVVKAPTLVADDGTVLMDSTLILQYLESLVDAERRLVPMAPEARLRAL 92
Cdd:PRK10542   41 DDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVGSLSRYHTI 95
GST_N_1 cd03043
GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from ...
14-70 8.63e-05

GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239341 [Multi-domain]  Cd Length: 73  Bit Score: 39.50  E-value: 8.63e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1717251416  14 RVAICLKLLGLPYEHRSLSVFR--TFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYL 70
Cdd:cd03043    15 RPWLLLKAAGIPFEEILVPLYTpdTRARILEFSPTGKVPVLV-DGGIVVWDSLAICEYL 72
GST_N_Metaxin_like cd03080
GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, ...
9-72 1.04e-04

GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. elegans. The fax gene of Drosophila was identified as a genetic modifier of Abelson (Abl) tyrosine kinase. The fax protein is localized in cellular membranes and is expressed in embryonic mesoderm and axons of the central nervous system.


Pssm-ID: 239378 [Multi-domain]  Cd Length: 75  Bit Score: 39.14  E-value: 1.04e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1717251416   9 SPYVRRVAICLKLLGLPYEHRSLSVFRTfdefsaiNPVVKAPtLVADDGTVLMDSTLILQYLES 72
Cdd:cd03080    17 SPFCLKVETFLRMAGIPYENKFGGLAKR-------SPKGKLP-FIELNGEKIADSELIIDHLEE 72
GST_N_EF1Bgamma cd03044
GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part ...
3-73 1.77e-04

GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression.


Pssm-ID: 239342 [Multi-domain]  Cd Length: 75  Bit Score: 38.77  E-value: 1.77e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1717251416   3 LIGMLDSPYVRRVAICLKLLGLPYEHRSLSVFRTF--DEFSAINPVVKAPTLVADDGTVLMDSTLILQYLESL 73
Cdd:cd03044     3 LYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKENktPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVANL 75
GST_N_Theta cd03050
GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial ...
9-70 5.24e-04

GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from aryl or alkyl sulfate esters.


Pssm-ID: 239348 [Multi-domain]  Cd Length: 76  Bit Score: 37.22  E-value: 5.24e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1717251416   9 SPYVRRVAICLKLLGLPYEHRSLSVF---RTFDEFSAINPVVKAPTLVaDDGTVLMDSTLILQYL 70
Cdd:cd03050     9 SQPSRAVYIFLKLNKIPFEECPIDLRkgeQLTPEFKKINPFGKVPAIV-DGDFTLAESVAILRYL 72
GST_N_Omega cd03055
GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
10-71 7.94e-03

GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega GST genes may be associated with the development of some types of cancer and the age-at-onset of both Alzheimer's and Parkinson's diseases.


Pssm-ID: 239353 [Multi-domain]  Cd Length: 89  Bit Score: 34.25  E-value: 7.94e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1717251416  10 PYVRRVAICLKLLGLPYEHRSLSVFRTFDEFSAINPVVKAPTLVADDGTVLMDSTLILQYLE 71
Cdd:cd03055    28 PYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH