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Conserved domains on  [gi|1714589238|emb|VUZ93648|]
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kelch domain-containing protein, putative [Plasmodium vivax]

Protein Classification

kelch repeat domain-containing protein( domain architecture ID 1000219)

kelch repeat domain-containing protein such as human kelch-like protein 1 that may play a role in organizing the actin cytoskeleton of the brain cells

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03098 super family cl33709
kelch-like protein; Provisional
 125-405 1.01e-29

kelch-like protein; Provisional


The actual alignment was detected with superfamily member PHA03098:

Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 120.64  E-value: 1.01e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 125 NSELISMHISAHTSAHIPTHIST-DKDKNYTVKMKIKKLPSLRNGHFLC----LTKNGEILAIGGCDGKKK-YGLVEKFC 198
Cdd:PHA03098  238 NLNKILPRSSTFGSIIYIHITMSiFTYNYITNYSPLSEINTIIDIHYVYcfgsVVLNNVIYFIGGMNKNNLsVNSVVSYD 317

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 199 ADKQTWKQINLMHFPRSNfCGVCTEDDDLFILGGEGNHHILNSVEYYDSKINSWRSLPPLNCVRHSASATIFKNIIFVLG 278
Cdd:PHA03098  318 TKTKSWNKVPELIYPRKN-PGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIG 396

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 279 gkdGIGDYGKVHKSMEMLNLkdKKMKWIMGKPLKQARLGLATVVFQDKLYAIGG---STGVKDLSSVEIYDFQTGEWTGG 355
Cdd:PHA03098  397 ---GISKNDELLKTVECFSL--NTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGisyIDNIKVYNIVESYNPVTNKWTEL 471

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1714589238 356 PSLNFSRSNFVVFVWNNQLVAYGGVSKHRgdLIKRAEILNEEGTRWLLLN 405
Cdd:PHA03098  472 SSLNFPRINASLCIFNNKIYVVGGDKYEY--YINEIEVYDDKTNTWTLFC 519
 
Name Accession Description Interval E-value
PHA03098 PHA03098
kelch-like protein; Provisional
 125-405 1.01e-29

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 120.64  E-value: 1.01e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 125 NSELISMHISAHTSAHIPTHIST-DKDKNYTVKMKIKKLPSLRNGHFLC----LTKNGEILAIGGCDGKKK-YGLVEKFC 198
Cdd:PHA03098  238 NLNKILPRSSTFGSIIYIHITMSiFTYNYITNYSPLSEINTIIDIHYVYcfgsVVLNNVIYFIGGMNKNNLsVNSVVSYD 317

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 199 ADKQTWKQINLMHFPRSNfCGVCTEDDDLFILGGEGNHHILNSVEYYDSKINSWRSLPPLNCVRHSASATIFKNIIFVLG 278
Cdd:PHA03098  318 TKTKSWNKVPELIYPRKN-PGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIG 396

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 279 gkdGIGDYGKVHKSMEMLNLkdKKMKWIMGKPLKQARLGLATVVFQDKLYAIGG---STGVKDLSSVEIYDFQTGEWTGG 355
Cdd:PHA03098  397 ---GISKNDELLKTVECFSL--NTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGisyIDNIKVYNIVESYNPVTNKWTEL 471

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1714589238 356 PSLNFSRSNFVVFVWNNQLVAYGGVSKHRgdLIKRAEILNEEGTRWLLLN 405
Cdd:PHA03098  472 SSLNFPRINASLCIFNNKIYVVGGDKYEY--YINEIEVYDDKTNTWTLFC 519
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
203-385 1.62e-29

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 115.64  E-value: 1.62e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 203 TWKQINLMHFPRSNFCGVcTEDDDLFILGGEGNHHILNSVEYYDSKINSWRSLPPLN-CVRHSASATIFKNIIFVLGGKD 281
Cdd:COG3055     2 TWSSLPDLPTPRSEAAAA-LLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPLPgPPRHHAAAVAQDGKLYVFGGFT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 282 GIGDYGKVHKSMEMLNLKdkKMKWIMGKPLKQARLGLATVVFQDKLYAIGGSTGVKDLSSVEIYDFQTGEWTGGPSLNFS 361
Cdd:COG3055    81 GANPSSTPLNDVYVYDPA--TNTWTKLAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTP 158

                         170       180
                  ....*....|....*....|....*
gi 1714589238 362 RSNF-VVFVWNNQLVAYGGVSKHRG 385
Cdd:COG3055   159 RDHLaAAVLPDGKILVIGGRNGSGF 183
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 314-359 2.13e-10

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 55.70  E-value: 2.13e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1714589238 314 ARLGLATVVFQDKLYAIGGSTGVKDLSSVEIYDFQTGEWTGGPSLN 359
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
Kelch smart00612
Kelch domain;
227-272 3.87e-09

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 52.18  E-value: 3.87e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1714589238  227 LFILGGEGNHHILNSVEYYDSKINSWRSLPPLNCVRHSASATIFKN 272
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
 
Name Accession Description Interval E-value
PHA03098 PHA03098
kelch-like protein; Provisional
 125-405 1.01e-29

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 120.64  E-value: 1.01e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 125 NSELISMHISAHTSAHIPTHIST-DKDKNYTVKMKIKKLPSLRNGHFLC----LTKNGEILAIGGCDGKKK-YGLVEKFC 198
Cdd:PHA03098  238 NLNKILPRSSTFGSIIYIHITMSiFTYNYITNYSPLSEINTIIDIHYVYcfgsVVLNNVIYFIGGMNKNNLsVNSVVSYD 317

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 199 ADKQTWKQINLMHFPRSNfCGVCTEDDDLFILGGEGNHHILNSVEYYDSKINSWRSLPPLNCVRHSASATIFKNIIFVLG 278
Cdd:PHA03098  318 TKTKSWNKVPELIYPRKN-PGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIG 396

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 279 gkdGIGDYGKVHKSMEMLNLkdKKMKWIMGKPLKQARLGLATVVFQDKLYAIGG---STGVKDLSSVEIYDFQTGEWTGG 355
Cdd:PHA03098  397 ---GISKNDELLKTVECFSL--NTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGisyIDNIKVYNIVESYNPVTNKWTEL 471

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1714589238 356 PSLNFSRSNFVVFVWNNQLVAYGGVSKHRgdLIKRAEILNEEGTRWLLLN 405
Cdd:PHA03098  472 SSLNFPRINASLCIFNNKIYVVGGDKYEY--YINEIEVYDDKTNTWTLFC 519
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
203-385 1.62e-29

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 115.64  E-value: 1.62e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 203 TWKQINLMHFPRSNFCGVcTEDDDLFILGGEGNHHILNSVEYYDSKINSWRSLPPLN-CVRHSASATIFKNIIFVLGGKD 281
Cdd:COG3055     2 TWSSLPDLPTPRSEAAAA-LLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPLPgPPRHHAAAVAQDGKLYVFGGFT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 282 GIGDYGKVHKSMEMLNLKdkKMKWIMGKPLKQARLGLATVVFQDKLYAIGGSTGVKDLSSVEIYDFQTGEWTGGPSLNFS 361
Cdd:COG3055    81 GANPSSTPLNDVYVYDPA--TNTWTKLAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTP 158

                         170       180
                  ....*....|....*....|....*
gi 1714589238 362 RSNF-VVFVWNNQLVAYGGVSKHRG 385
Cdd:COG3055   159 RDHLaAAVLPDGKILVIGGRNGSGF 183
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
158-395 1.67e-29

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 115.64  E-value: 1.67e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 158 KIKKLPSLRNGHFLCLTKNGEILAIGGCDGKKKYGL----VEKFCADKQTWKQINLMHFPRSNFcGVCTEDDDLFILGGE 233
Cdd:COG3055    52 ELAPLPGPPRHHAAAVAQDGKLYVFGGFTGANPSSTplndVYVYDPATNTWTKLAPMPTPRGGA-TALLLDGKIYVVGGW 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 234 GNHHILNSVEYYDSKINSWRSLPPL-NCVRHSASATIFKNIIFVLGGKDGIGDYGKvhksmemlnlkdkkmkWIMGKPLK 312
Cdd:COG3055   131 DDGGNVAWVEVYDPATGTWTQLAPLpTPRDHLAAAVLPDGKILVIGGRNGSGFSNT----------------WTTLAPLP 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 313 QARLGLATVVFQDKLYAIGGSTGVkdLSSVEIYDFQTGEWTGGPSLNFSRSNFVVFVWNNQLVAYGGVSKH--RGDLIKR 390
Cdd:COG3055   195 TARAGHAAAVLGGKILVFGGESGF--SDEVEAYDPATNTWTALGELPTPRHGHAAVLTDGKVYVIGGETKPgvRTPLVTS 272


                  ....*
gi 1714589238 391 AEILN 395
Cdd:COG3055   273 AEVYD 277
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 314-359 2.13e-10

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 55.70  E-value: 2.13e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1714589238 314 ARLGLATVVFQDKLYAIGGSTGVKDLSSVEIYDFQTGEWTGGPSLN 359
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
Kelch smart00612
Kelch domain;
227-272 3.87e-09

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 52.18  E-value: 3.87e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1714589238  227 LFILGGEGNHHILNSVEYYDSKINSWRSLPPLNCVRHSASATIFKN 272
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
Kelch smart00612
Kelch domain;
326-371 4.19e-09

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 51.79  E-value: 4.19e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1714589238  326 KLYAIGGSTGVKDLSSVEIYDFQTGEWTGGPSLNFSRSNF-VVFVWN 371
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHgVAVING 47
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 213-259 1.59e-08

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 50.30  E-value: 1.59e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1714589238 213 PRSNfCGVCTEDDDLFILGGEGNHHILNSVEYYDSKINSWRSLPPLN 259
Cdd:pfam01344   1 RRSG-AGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
PLN02153 PLN02153
epithiospecifier protein
 227-410 1.42e-05

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 46.90  E-value: 1.42e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 227 LFILGGEGNHHILNSVEYYDSKINSWRSLPPLNCV-----RHSASATIFKNIIFVLGG--KDGIGDYGKVHKSMEMLNLK 299
Cdd:PLN02153   88 LYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEggpeaRTFHSMASDENHVYVFGGvsKGGLMKTPERFRTIEAYNIA 167

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 300 DKkmKWIM----GKPLKQaRLGLATVVFQDKLYAIGG------STGVKDLSS--VEIYDFQTGEWT------GGPSlnfS 361
Cdd:PLN02153  168 DG--KWVQlpdpGENFEK-RGGAGFAVVQGKIWVVYGfatsilPGGKSDYESnaVQFFDPASGKWTevettgAKPS---A 241

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1714589238 362 RSNFVVFVWNNQLVAYGG-----VSKHR--GDLIKRAEILNEEGTRWLLLNEDGSP 410
Cdd:PLN02153  242 RSVFAHAVVGKYIIIFGGevwpdLKGHLgpGTLSNEGYALDTETLVWEKLGECGEP 297
Kelch_4 pfam13418
Galactose oxidase, central domain;
213-258 3.30e-05

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 41.06  E-value: 3.30e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1714589238 213 PRSNFCGVCTEDDDLFILGGEG-NHHILNSVEYYDSKINSWRSLPPL 258
Cdd:pfam13418   1 PRAYHTSTSIPDDTIYLFGGEGeDGTLLSDLWVFDLSTNEWTRLGSL 47
Kelch_6 pfam13964
Kelch motif;
314-362 9.62e-05

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 39.63  E-value: 9.62e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1714589238 314 ARLGLATVVFQDKLYAIGGST-GVKDLSSVEIYDFQTGEWTGGPSLNFSR 362
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVFGGYTnASPALNKLEVYNPLTKSWEELPPLPTPR 50
PHA02790 PHA02790
Kelch-like protein; Provisional
 150-410 5.98e-04

Kelch-like protein; Provisional


Pssm-ID: 165153 [Multi-domain]  Cd Length: 480  Bit Score: 41.95  E-value: 5.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 150 DKNYTVKMKIKKLPSLRN--GHFLCLTKNG------------------EILAIGGCDGKKKYGLVEKFCADKQTWKQI-N 208
Cdd:PHA02790  181 DEDYVVDFVIKWYMKRRNrlGNLLLLIKNVirsnylsprginnvkwilDCTKIFHCDKQPRKSYKYPFIEYPMNMDQIiD 260

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 209 LMHFPRSNFCGvctedDDLFILGGEGNHHILNSVEYYDSKINSWRSLPPLNCVRHSASATIFKNIIFVLGGKDGigdygk 288
Cdd:PHA02790  261 IFHMCTSTHVG-----EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPN------ 329

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 289 vHKSMEMLNLKDkkMKWIMGKPLKQARLGLATVVFQDKLYAIGGSTGVKDLSSVEIYDFQtgEWTGGPSLNFSRSNFVVF 368
Cdd:PHA02790  330 -PTSVERWFHGD--AAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHD--QWQFGPSTYYPHYKSCAL 404

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1714589238 369 VWNNQLVAYGgvskhrgdliKRAEILNEEGTRWLLLNEDGSP 410
Cdd:PHA02790  405 VFGRRLFLVG----------RNAEFYCESSNTWTLIDDPIYP 436
PHA02713 PHA02713
hypothetical protein; Provisional
 224-400 6.66e-04

hypothetical protein; Provisional


Pssm-ID: 165086 [Multi-domain]  Cd Length: 557  Bit Score: 41.92  E-value: 6.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 224 DDDLFILGGEG-NHHILNSVEYYDSKINSWRSLPPLNCVRHSASATIFKNIIFVLGGKDGIgdygKVHKSMEMLNLKDKK 302
Cdd:PHA02713  303 DNEIIIAGGYNfNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGT----NVERTIECYTMGDDK 378

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 303 MKWIMGKPLKQARLGLAtvVFQDKLYAIGGSTGVKDLSSVEIYDFQTGEWTGGPSLNFSRSNFVVFVWNNQLVAYGG--- 379
Cdd:PHA02713  379 WKMLPDMPIALSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGtir 456

                         170       180
                  ....*....|....*....|...
gi 1714589238 380 --VSKHRGDLIKRAEILNEEGTR 400
Cdd:PHA02713  457 pgVVSHKDDIYVVCDIKDEKNVK 479
Kelch_2 pfam07646
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 315-353 2.73e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 462220 [Multi-domain]  Cd Length: 47  Bit Score: 35.39  E-value: 2.73e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1714589238 315 RLGLATVVFQDKLYAIGGSTGVKDLSS--VEIYDFQTGEWT 353
Cdd:pfam07646   2 RYPHASSVPGGKLYVVGGSDGLGDLSSsdVLVYDPETNVWT 42
Kelch_4 pfam13418
Galactose oxidase, central domain;
314-358 4.19e-03

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 34.90  E-value: 4.19e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1714589238 314 ARLGLATVVFQ-DKLYAIGGSTGVKD-LSSVEIYDFQTGEWTGGPSL 358
Cdd:pfam13418   1 PRAYHTSTSIPdDTIYLFGGEGEDGTlLSDLWVFDLSTNEWTRLGSL 47
Kelch smart00612
Kelch domain;
179-220 4.72e-03

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 34.84  E-value: 4.72e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1714589238  179 ILAIGGCDGKKKYGLVEKFCADKQTWKQINLMHFPRSNFCGV 220
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVA 43
PHA02713 PHA02713
hypothetical protein; Provisional
 152-258 5.09e-03

hypothetical protein; Provisional


Pssm-ID: 165086 [Multi-domain]  Cd Length: 557  Bit Score: 38.84  E-value: 5.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589238 152 NYTVKMKIKKLPSLRNG-HFLCLTKNGEILAIGGCDGKKKYGLVEKFCADKQTWKQINLMHFPRSNFcGVCTEDDDLFIL 230
Cdd:PHA02713  326 NIENKIHVELPPMIKNRcRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSY-GMCVLDQYIYII 404

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1714589238 231 GG------------------EGNHHILNSVEYYDSKINSWRSLPPL 258
Cdd:PHA02713  405 GGrtehidytsvhhmnsidmEEDTHSSNKVIRYDTVNNIWETLPNF 450
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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