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Conserved domains on  [gi|1714589228|emb|VUZ93638|]
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conserved Plasmodium protein, unknown function [Plasmodium vivax]

Protein Classification

ICP22 family protein( domain architecture ID 708738)

ICP22 family protein similar to Herpesvirus saimiri transcriptional regulator ICP22 homolog (also known as immediate-early protein) that regulates the transcription of alphaherpesviruses and their host genes

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03169 super family cl27451
hypothetical protein; Provisional
 888-1065 3.54e-04

hypothetical protein; Provisional


The actual alignment was detected with superfamily member PHA03169:

Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 44.96  E-value: 3.54e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589228  888 RVDSLDRLDPAEEDREAVLRKAELFNRGEG-QQHEG-EQVRVESAAYGEDGVVGEDHLQLRARGRYTTHIGRGAFARGSS 965
Cdd:PHA03169    61 VAEQGHRQTESDTETAEESRHGEKEERGQGgPSGSGsESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSP 140

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589228  966 DDLQELSQHARANSDEGNYKkfvyDVGEGF---SVEDDLELAAGEEAFRSADMGGHPDGAEGGSHMDGADEGNHP----- 1037
Cdd:PHA03169   141 PSHPGPHEPAPPESHNPSPN----QQPSSFlqpSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPgepqs 216

                          170       180       190
                   ....*....|....*....|....*....|..
gi 1714589228 1038 DGADEGHLPDDAEEGSHPDGAD----EGPPPE 1065
Cdd:PHA03169   217 PTPQQAPSPNTQQAVEHEDEPTeperEGPPFP 248
 
Name Accession Description Interval E-value
PHA03169 PHA03169
hypothetical protein; Provisional
 888-1065 3.54e-04

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 44.96  E-value: 3.54e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589228  888 RVDSLDRLDPAEEDREAVLRKAELFNRGEG-QQHEG-EQVRVESAAYGEDGVVGEDHLQLRARGRYTTHIGRGAFARGSS 965
Cdd:PHA03169    61 VAEQGHRQTESDTETAEESRHGEKEERGQGgPSGSGsESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSP 140

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589228  966 DDLQELSQHARANSDEGNYKkfvyDVGEGF---SVEDDLELAAGEEAFRSADMGGHPDGAEGGSHMDGADEGNHP----- 1037
Cdd:PHA03169   141 PSHPGPHEPAPPESHNPSPN----QQPSSFlqpSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPgepqs 216

                          170       180       190
                   ....*....|....*....|....*....|..
gi 1714589228 1038 DGADEGHLPDDAEEGSHPDGAD----EGPPPE 1065
Cdd:PHA03169   217 PTPQQAPSPNTQQAVEHEDEPTeperEGPPFP 248
 
Name Accession Description Interval E-value
PHA03169 PHA03169
hypothetical protein; Provisional
 888-1065 3.54e-04

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 44.96  E-value: 3.54e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589228  888 RVDSLDRLDPAEEDREAVLRKAELFNRGEG-QQHEG-EQVRVESAAYGEDGVVGEDHLQLRARGRYTTHIGRGAFARGSS 965
Cdd:PHA03169    61 VAEQGHRQTESDTETAEESRHGEKEERGQGgPSGSGsESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSP 140

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1714589228  966 DDLQELSQHARANSDEGNYKkfvyDVGEGF---SVEDDLELAAGEEAFRSADMGGHPDGAEGGSHMDGADEGNHP----- 1037
Cdd:PHA03169   141 PSHPGPHEPAPPESHNPSPN----QQPSSFlqpSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPgepqs 216

                          170       180       190
                   ....*....|....*....|....*....|..
gi 1714589228 1038 DGADEGHLPDDAEEGSHPDGAD----EGPPPE 1065
Cdd:PHA03169   217 PTPQQAPSPNTQQAVEHEDEPTeperEGPPFP 248
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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