MAG: hypothetical protein EA408_00120, partial [Marinilabiliales bacterium]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Fib_succ_major super family | cl09821 | Fibrobacter succinogenes major domain (Fib_succ_major); This domain of about 175 to 200 amino ... |
32-58 | 8.68e-07 | ||
Fibrobacter succinogenes major domain (Fib_succ_major); This domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron. The actual alignment was detected with superfamily member TIGR02145: Pssm-ID: 471939 Cd Length: 171 Bit Score: 44.21 E-value: 8.68e-07
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| Fib_succ_major super family | cl09821 | Fibrobacter succinogenes major domain (Fib_succ_major); This domain of about 175 to 200 amino ... |
47-74 | 2.44e-04 | ||
Fibrobacter succinogenes major domain (Fib_succ_major); This domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron. The actual alignment was detected with superfamily member pfam09603: Pssm-ID: 471939 Cd Length: 171 Bit Score: 37.82 E-value: 2.44e-04
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| Name | Accession | Description | Interval | E-value | ||
| Fib_succ_major | TIGR02145 | Fibrobacter succinogenes major paralogous domain; This domain of about 175 to 200 amino acids ... |
32-58 | 8.68e-07 | ||
Fibrobacter succinogenes major paralogous domain; This domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron. [Cell envelope, Other] Pssm-ID: 273995 Cd Length: 171 Bit Score: 44.21 E-value: 8.68e-07
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| Fib_succ_major | pfam09603 | Fibrobacter succinogenes major domain (Fib_succ_major); This domain of about 175 to 200 amino ... |
47-74 | 2.44e-04 | ||
Fibrobacter succinogenes major domain (Fib_succ_major); This domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron. Pssm-ID: 462836 Cd Length: 171 Bit Score: 37.82 E-value: 2.44e-04
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| Name | Accession | Description | Interval | E-value | ||
| Fib_succ_major | TIGR02145 | Fibrobacter succinogenes major paralogous domain; This domain of about 175 to 200 amino acids ... |
32-58 | 8.68e-07 | ||
Fibrobacter succinogenes major paralogous domain; This domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron. [Cell envelope, Other] Pssm-ID: 273995 Cd Length: 171 Bit Score: 44.21 E-value: 8.68e-07
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| Fib_succ_major | pfam09603 | Fibrobacter succinogenes major domain (Fib_succ_major); This domain of about 175 to 200 amino ... |
47-74 | 2.44e-04 | ||
Fibrobacter succinogenes major domain (Fib_succ_major); This domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron. Pssm-ID: 462836 Cd Length: 171 Bit Score: 37.82 E-value: 2.44e-04
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| Blast search parameters | ||||
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