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Conserved domains on  [gi|1707765524|gb|QDP18100|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Dictyophorus spumans]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 17-201 1.15e-84

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 252.38  E-value: 1.15e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00193   12 IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIY 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00193   92 PYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQ 171

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00193  172 KYIWFIFFSFPLFLIWFVSCLAETN 196
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 17-201 1.15e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 252.38  E-value: 1.15e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00193   12 IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIY 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00193   92 PYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQ 171

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00193  172 KYIWFIFFSFPLFLIWFVSCLAETN 196
NADHdh pfam00146
NADH dehydrogenase;
17-201 2.59e-56

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 179.98  E-value: 2.59e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYM--CSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMD 174
Cdd:pfam00146  86 PFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVE 165

                         170       180
                  ....*....|....*....|....*..
gi 1707765524 175 YQSYCWFVFISFPLMISFFASCLAETN 201
Cdd:pfam00146 166 AQAGGWFIPLQPLAFIVFFIAALAETN 192
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 17-201 1.17e-53

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 174.16  E-value: 1.17e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:COG1005    19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMC--SFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMD 174
Cdd:COG1005    99 PFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVE 178

                         170       180
                  ....*....|....*....|....*...
gi 1707765524 175 YQS-YCWFVFISFPLMISFFASCLAETN 201
Cdd:COG1005   179 AQAgGLWFILPQPLAFVVFFIAALAETN 206
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 17-201 1.15e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 252.38  E-value: 1.15e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00193   12 IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIY 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00193   92 PYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQ 171

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00193  172 KYIWFIFFSFPLFLIWFVSCLAETN 196
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 17-201 1.00e-71

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 219.52  E-value: 1.00e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00225   11 LICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLY 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00225   91 PSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQ 170

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00225  171 KYFWFMFVLFPLFFCWMISMLAETN 195
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 18-201 3.73e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 200.10  E-value: 3.73e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  18 IFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVFP 97
Cdd:MTH00143   12 LCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYP 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  98 FLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQS 177
Cdd:MTH00143   92 SYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQF 171

                         170       180
                  ....*....|....*....|....
gi 1707765524 178 YCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00143  172 SVWLGFLMFPVFLMWFVSCLAETN 195
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 17-201 2.28e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 183.56  E-value: 2.28e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00111   15 IIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00111   95 PMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQ 174

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00111  175 EPLWLIFSSWPLAMMWYISTLAETN 199
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 17-201 8.61e-57

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 182.10  E-value: 8.61e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00040   14 IVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLI 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00040   94 PVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQ 173

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00040  174 NGSWLLFPCLPLFYIWFISTLAETN 198
NADHdh pfam00146
NADH dehydrogenase;
17-201 2.59e-56

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 179.98  E-value: 2.59e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYM--CSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMD 174
Cdd:pfam00146  86 PFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVE 165

                         170       180
                  ....*....|....*....|....*..
gi 1707765524 175 YQSYCWFVFISFPLMISFFASCLAETN 201
Cdd:pfam00146 166 AQAGGWFIPLQPLAFIVFFIAALAETN 192
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 17-201 3.83e-56

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 179.72  E-value: 3.83e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00218   12 ILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00218   92 PLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQ 171

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00218  172 ETIWLLIPEWPLALMWFISTLAETN 196
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 17-201 5.61e-56

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 179.82  E-value: 5.61e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00071   15 IIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00071   95 PMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQ 174

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00071  175 EFMWLIIPAWPMAAMWFISTLAETN 199
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 17-201 7.14e-54

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 174.43  E-value: 7.14e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00104   10 IIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00104   90 PMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQ 169

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00104  170 EHLWLIFPSWPLAMMWFISTLAETN 194
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 17-201 1.17e-53

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 174.16  E-value: 1.17e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:COG1005    19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMC--SFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMD 174
Cdd:COG1005    99 PFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVE 178

                         170       180
                  ....*....|....*....|....*...
gi 1707765524 175 YQS-YCWFVFISFPLMISFFASCLAETN 201
Cdd:COG1005   179 AQAgGLWFILPQPLAFVVFFIAALAETN 206
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 17-201 2.69e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 170.56  E-value: 2.69e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00134   16 IVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPM 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQ 176
Cdd:MTH00134   96 PMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQ 175

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00134  176 ESIWLLLPAWPLAAMWYISTLAETN 200
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 20-201 2.69e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 169.92  E-value: 2.69e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  20 VLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVFPFL 99
Cdd:MTH00195   15 VLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSP 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524 100 TYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYQSYC 179
Cdd:MTH00195   95 FGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFS 174

                         170       180
                  ....*....|....*....|..
gi 1707765524 180 WFVFISFPLMISFFASCLAETN 201
Cdd:MTH00195  175 WVILLCPPISFMWYVSTLAETN 196
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
17-201 3.77e-51

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 167.29  E-value: 3.77e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:PRK06076   20 LVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVI 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFL-TYMCSFI-YSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMD 174
Cdd:PRK06076  100 PFGpELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVE 179

                         170       180
                  ....*....|....*....|....*..
gi 1707765524 175 YQSYCWFVFISFPLMISFFASCLAETN 201
Cdd:PRK06076  180 AQFLSWNIIPQPPAFVVFFIAAVAETN 206
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 17-201 3.93e-49

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 161.87  E-value: 3.93e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00010   13 YVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMdYQ 176
Cdd:MTH00010   93 PHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKII-MS 171

                         170       180
                  ....*....|....*....|....*
gi 1707765524 177 SYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00010  172 QYSWILLMIIPLTVSWFITNLAETN 196
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-201 2.09e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 152.58  E-value: 2.09e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524   2 MYYDLLMFFLNFLLLVIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLS 81
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  82 PIFSLMISLFVWSVFPFL--TYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFS 159
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1707765524 160 LIILVGSFNFFDFMDYQS-YCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETN 203
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 17-201 1.87e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 150.26  E-value: 1.87e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00054   12 LVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVI 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLT--YMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMD 174
Cdd:MTH00054   92 PYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVL 171

                         170       180
                  ....*....|....*....|....*..
gi 1707765524 175 YQSYCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00054  172 AQKNIWFIFPLFPAAIMFFVSALAETN 198
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 17-200 3.85e-36

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 128.98  E-value: 3.85e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFV--LVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWS 94
Cdd:MTH00029   15 IIFVplLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWA 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  95 VFPFL--TYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDF 172
Cdd:MTH00029   95 IVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEI 174

                         170       180
                  ....*....|....*....|....*...
gi 1707765524 173 MDYQSYCWFVFISFPLMISFFASCLAET 200
Cdd:MTH00029  175 VISQRSVWLIIPLFPAAIMFMVASLAET 202
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 17-196 5.62e-33

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 119.23  E-value: 5.62e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:MTH00090    6 MIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMDYq 176
Cdd:MTH00090   86 PYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFSL- 164

                         170       180
                  ....*....|....*....|
gi 1707765524 177 sycWFVFISFPLMISFFASC 196
Cdd:MTH00090  165 ---SLFVIYLPFLIMIIAEL 181
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-201 4.54e-22

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 90.75  E-value: 4.54e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  18 IFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVFP 97
Cdd:MTH00058   12 LIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYG 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  98 FLTYMCSFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFmdYQS 177
Cdd:MTH00058   92 SYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDF--YYS 169

                         170       180
                  ....*....|....*....|....
gi 1707765524 178 YCWFVFISFPLMISFFASCLAETN 201
Cdd:MTH00058  170 GWLSVLLFPLIYILWLVCILCETN 193
ndhA CHL00032
NADH dehydrogenase subunit 1
 17-199 9.35e-17

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 76.91  E-value: 9.35e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPNKVGFMGILQPFSDAIKLLMSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:CHL00032   37 VLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVI 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYmcsFIYSFL-----FFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFD 171
Cdd:CHL00032  117 PFGYH---LVLADLsigvfLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVD 193

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1707765524 172 FMDYQSY-------CWFVFISFplmISFFASCLAE 199
Cdd:CHL00032  194 IVEAQSKygfwgwnLWRQPIGF---IVFLISSLAE 225
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
17-201 2.29e-15

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 72.52  E-value: 2.29e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  17 VIFVLVSVAFLTLFERKVLGYIHIRKGPnkvgfmGILQPFSDAIKLLmSEQPVLIKSNYLLYYLSPIFSLMISLFVWSVF 96
Cdd:COG0650    11 LLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLL-RKETVVPETASWLFRAAPYVALAAMLLAALLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765524  97 PFLTYMC--SFIYSFLFFLCCSSLGVYALMIAGWSSKSNYSLLGSLRSVAQTISYEVSLALILFSLIILVGSFNFFDFMD 174
Cdd:COG0650    84 PVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVA 163

                         170       180       190
                  ....*....|....*....|....*....|
gi 1707765524 175 YQS---YCWFVFISFPLMISFFASCLAETN 201
Cdd:COG0650   164 YQAahgPLLLSPSLLLAAIAFFIVLLAETG 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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