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Conserved domains on  [gi|1707765521|gb|QDP18097|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Dictyophorus spumans]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 8.56e-38

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 123.35  E-value: 8.56e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  15 PMIVMTMASIMSKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTL 94
Cdd:MTH00161   13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                          90       100
                  ....*....|....*....|.
gi 1707765521  95 LFIMILLSGLYHEWNQGALQW 115
Cdd:MTH00161   93 FFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 8.56e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 123.35  E-value: 8.56e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  15 PMIVMTMASIMSKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTL 94
Cdd:MTH00161   13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                          90       100
                  ....*....|....*....|.
gi 1707765521  95 LFIMILLSGLYHEWNQGALQW 115
Cdd:MTH00161   93 FFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 2.77e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.95  E-value: 2.77e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNsNLMIWLMSTLLFIMILLSGLYHEWNQG 111
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRE-LGWFGFVEMLIFIAILLVGLVYAWKKG 91


                  ...
gi 1707765521 112 ALQ 114
Cdd:pfam00507  92 ALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 7.89e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 87.87  E-value: 7.89e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIwLMSTLLFIMILLSGLYHEWNQG 111
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFG-LIEMLVFIAILLVGLIYAWKKG 113


                  ....
gi 1707765521 112 ALQW 115
Cdd:COG0838   114 ALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 8.56e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 123.35  E-value: 8.56e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  15 PMIVMTMASIMSKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTL 94
Cdd:MTH00161   13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                          90       100
                  ....*....|....*....|.
gi 1707765521  95 LFIMILLSGLYHEWNQGALQW 115
Cdd:MTH00161   93 FFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 16-117 6.01e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 118.81  E-value: 6.01e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  16 MIVMTMASIMSKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTLL 95
Cdd:MTH00148   16 PVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFI 95

                          90       100
                  ....*....|....*....|..
gi 1707765521  96 FIMILLSGLYHEWNQGALQWAE 117
Cdd:MTH00148   96 FLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 15-117 2.67e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 109.70  E-value: 2.67e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  15 PMIVMTMASIMSKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTL 94
Cdd:MTH00202   15 SSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGT 94

                          90       100
                  ....*....|....*....|...
gi 1707765521  95 LFIMILLSGLYHEWNQGALQWAE 117
Cdd:MTH00202   95 IFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 15-116 4.01e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 99.16  E-value: 4.01e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  15 PMIVMTMASIMSKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTL 94
Cdd:MTH00012   15 PPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSI 94

                          90       100
                  ....*....|....*....|..
gi 1707765521  95 LFIMILLSGLYHEWNQGALQWA 116
Cdd:MTH00012   95 LFLLILVIGLIHEWREGSLDWS 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 2.77e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.95  E-value: 2.77e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNsNLMIWLMSTLLFIMILLSGLYHEWNQG 111
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRE-LGWFGFVEMLIFIAILLVGLVYAWKKG 91


                  ...
gi 1707765521 112 ALQ 114
Cdd:pfam00507  92 ALE 94
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-117 7.22e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 93.08  E-value: 7.22e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  34 EKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTLLFIMILLSGLYHEWNQGAL 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ....
gi 1707765521 114 QWAE 117
Cdd:MTH00106  112 EWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 32-117 2.04e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 89.66  E-value: 2.04e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTLLFIMILLSGLYHEWNQG 111
Cdd:MTH00042   31 DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVNG 110


                  ....*.
gi 1707765521 112 ALQWAE 117
Cdd:MTH00042  111 GLEWAE 116
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 7.89e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 87.87  E-value: 7.89e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIwLMSTLLFIMILLSGLYHEWNQG 111
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFG-LIEMLVFIAILLVGLIYAWKKG 113


                  ....
gi 1707765521 112 ALQW 115
Cdd:COG0838   114 ALEW 117
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-117 1.53e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 87.36  E-value: 1.53e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  16 MIVMTMASIMSKKIIN----------DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPT---VLILN 82
Cdd:MTH00069    3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNT 82

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1707765521  83 NSNLMIWlmSTLlfIMILLS-GLYHEWNQGALQWAE 117
Cdd:MTH00069   83 PTNTLFW--STL--ILILLTlGLIYEWIQGGLEWAE 114
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-116 6.78e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 85.69  E-value: 6.78e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNlMIWLMSTLLFIMILLSGLYHEWNQG 111
Cdd:PRK06602   38 DREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIG-WLGFVEAMIFILVLLVGLVYLWRKG 116


                  ....*
gi 1707765521 112 ALQWA 116
Cdd:PRK06602  117 ALDWE 121
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 15-116 1.02e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 84.93  E-value: 1.02e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  15 PMIVMTMASIMSKkIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIWLMSTL 94
Cdd:MTH00113   14 STILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWAT 92

                          90       100
                  ....*....|....*....|..
gi 1707765521  95 LFIMILLSGLYHEWNQGALQWA 116
Cdd:MTH00113   93 IILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 17-115 1.88e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 84.56  E-value: 1.88e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  17 IVMTMASIMSKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPtvLILNNSNLMIWLMSTLLF 96
Cdd:MTH00203   16 LILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLP--LPWSNQLSSLSLLLAFLF 93

                          90
                  ....*....|....*....
gi 1707765521  97 IMILLSGLYHEWNQGALQW 115
Cdd:MTH00203   94 LILLTLGLIYEWLQGGLEW 112
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 32-117 3.25e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 83.82  E-value: 3.25e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPtvliLNNSNLMIWLMSTLLF---IMILLS-GLYHE 107
Cdd:MTH00136   31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLP----LPWGDQLPSPLLTFFWataVLILLTlGLIYE 106

                          90
                  ....*....|
gi 1707765521 108 WNQGALQWAE 117
Cdd:MTH00136  107 WLQGGLEWAE 116
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 17-115 1.02e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 75.10  E-value: 1.02e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  17 IVMTMASIMSKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLM-IWLMstLL 95
Cdd:MTH00018   15 ALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFgFWTM--VG 92

                          90       100
                  ....*....|....*....|
gi 1707765521  96 FIMILLSGLYHEWNQGALQW 115
Cdd:MTH00018   93 FLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 9.30e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 72.43  E-value: 9.30e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLM-IWLMstLLFIMILLSGLYHEWNQ 110
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFgFWVM--YLFLIILTIGLIYEWVK 112


                  ....*
gi 1707765521 111 GALQW 115
Cdd:MTH00055  113 GGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 3.69e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 66.11  E-value: 3.69e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLM-IWLMSTllFIMILLSGLYHEWNQ 110
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIK 117


                  ....*
gi 1707765521 111 GALQW 115
Cdd:MTH00030  118 GGLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
21-115 4.31e-11

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 55.83  E-value: 4.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  21 MASIMSKKIIN-DRE--KNSPFECGFDPKSSPRmSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIwLMSTLLFI 97
Cdd:PRK08489   30 LARFISRKLAQkNTEklKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFKLLGLFG-LIEMLLFI 107

                          90
                  ....*....|....*...
gi 1707765521  98 MILLSGLYHEWNQGALQW 115
Cdd:PRK08489  108 VLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 5.73e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 52.75  E-value: 5.73e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  19 MTMASIMSKKIINdREKNSPFECGFDPKSSPR--MSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMiWLMSTLLF 96
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAggGRFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVF-GLVEMALF 99

                          90
                  ....*....|....*....
gi 1707765521  97 IMILLSGLYHEWNQGALQW 115
Cdd:PRK07928  100 MLTVFVAYAYVWRRGGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 7.81e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 52.44  E-value: 7.81e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  32 DREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLMIwLMSTLLFIMILLSGLYHEWNQG 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFA-LIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1707765521 112 ALQW 115
Cdd:PRK07756  118 VLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 31-115 8.68e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 41.42  E-value: 8.68e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  31 NDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVlilnnSNLMIWLMSTLLFIMILLSGLYHEWNQ 110
Cdd:MTH00092   30 FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLL-----VSDFSSLISFFMLMIFIFFGFYMEWWY 104


                  ....*
gi 1707765521 111 GALQW 115
Cdd:MTH00092  105 GKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 26-115 6.69e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.41  E-value: 6.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765521  26 SKKIINDREKNSPFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLilnNSNLMIWLMSTLLFIMILLSGLY 105
Cdd:MTH00060   28 NKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPF---QGLLFYNFWYYYFFLLLLFLGFV 104

                          90
                  ....*....|
gi 1707765521 106 HEWNQGALQW 115
Cdd:MTH00060  105 VELFSGYVRW 114
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 38-115 8.44e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 36.71  E-value: 8.44e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765521  38 PFECGFDPKSSPRMSFSIQFFLIAMIFLIFDVEIALIIPTVLILNNSNLmIWLMSTLLFIMILLSGLYHEWNQGALQW 115
Cdd:PRK06432   66 PYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGL-IPFIETLIFLAMPLFAVYYAFKMGYMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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