|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 683.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 12 IKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 92 FICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 172 DNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIMLCLINPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 252 GDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPINQLMFWTMVT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1707765486 332 VVILLTWIGKRPVEEPYILTGQILTTIYFLYFIIN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-365 |
3.58e-125 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 366.04 E-value: 3.58e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 12 IKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 92 FICIYLHVGRGIYYGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGF 169
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 170 AVDNATLNRFFTFH-FILPFLIIALSAIHLFFLHQLGSNNPLG----MNSNIDKIPFHPYFTFKDLITFILMtsLLIMLC 244
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVF--LGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 245 LINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPYYNKTPFRGIQFYPIN 322
Cdd:COG1290 258 LAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1707765486 323 QLMFWTMVTVVILLTWIGKRPveEPYILTGQILTTIYFLYFII 365
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
8.54e-85 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 256.14 E-value: 8.54e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 10 PLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 90 MFFICIYLHVGRGIYYGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1707765486 168 GFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
9.88e-77 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 234.97 E-value: 9.88e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 19 LIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 99 VGRGIYYGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1707765486 177 NRFFTFHFILPFLIIALSAIHLFFLHQLG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
238-314 |
1.25e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 53.65 E-value: 1.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 238 SLLIMLCLINPYLLGDPdnfipANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYN-----KTP 312
Cdd:TIGR01156 49 ACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEnvnkfQNP 123
|
..
gi 1707765486 313 FR 314
Cdd:TIGR01156 124 FR 125
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 683.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 12 IKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 92 FICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 172 DNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIMLCLINPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 252 GDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPINQLMFWTMVT 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1707765486 332 VVILLTWIGKRPVEEPYILTGQILTTIYFLYFIIN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 612.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 1 MNKPLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 81 RTLHSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKE 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 161 LVQWVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 241 IMLCLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765486 321 INQLMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFIINVHISYLWDNII 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 602.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 1 MNKPLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 81 RTLHSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKE 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 161 LVQWVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 241 IMLCLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1707765486 321 INQLMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFII 365
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 596.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 5 LRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 85 SNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 165 VWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIMLC 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 245 LINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPINQL 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1707765486 325 MFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFII 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 590.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 1 MNKPLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 81 RTLHSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKE 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 161 LVQWVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 241 IMLCLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765486 321 INQLMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFIINVHISYLWDNIIK 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 586.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 1 MNKPLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 81 RTLHSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKE 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 161 LVQWVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 241 IMLCLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1707765486 321 INQLMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFIINVHISYLWDN 375
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEN 375
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 584.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 5 LRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 85 SNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 165 VWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIMLC 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 245 LINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPINQL 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1707765486 325 MFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFII 365
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 577.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 4 PLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTL 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 84 HSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 164 WVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIML 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 244 CLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPINQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765486 324 LMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFIINVHISYLWDNIIKK 379
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLK 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 537.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 4 PLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTL 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 84 HSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 164 WVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIML 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 244 CLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPINQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1707765486 324 LMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFII 365
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 522.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 1 MNKPLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 81 RTLHSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKE 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 161 LVQWVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 241 IMLCLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765486 321 INQLMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFIINVHISYLWDNIIK 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-365 |
7.62e-175 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 491.52 E-value: 7.62e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 4 PLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 84 HSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 164 WVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIML 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 244 CLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPINQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1707765486 324 LMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFII 365
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-375 |
2.80e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 485.37 E-value: 2.80e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 1 MNKPLRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWII 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 81 RTLHSNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKE 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 161 LVQWVWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 241 IMLCLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1707765486 321 INQLMFWTMVTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFIINVHISYLWDN 375
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEN 375
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
5-367 |
1.27e-132 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 384.67 E-value: 1.27e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 5 LRLKQPLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLH 84
Cdd:MTH00033 1 MRLRKTGLLEPVNDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 85 SNGASMFFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQW 164
Cdd:MTH00033 81 ANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 165 VWGGFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIMLC 244
Cdd:MTH00033 161 IWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 245 lINPY---LLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPI 321
Cdd:MTH00033 241 -IEPRietLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPT 319
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1707765486 322 NQLMFWTMVTVVILLTWIGKRPV-EEPYILTGQILTTIYFLYFIINV 367
Cdd:MTH00033 320 GKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLV 366
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
2.40e-127 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 370.04 E-value: 2.40e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 13 KIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 93 ICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 173 NATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTsLLIMLCLINPYLLG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 253 DPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNktpFRGIQFYPINQLMFWTMVTV 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 1707765486 333 VILLTWIGKRPVEEPYILTGQILTTIYFLYFII 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-365 |
3.58e-125 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 366.04 E-value: 3.58e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 12 IKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 92 FICIYLHVGRGIYYGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGF 169
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 170 AVDNATLNRFFTFH-FILPFLIIALSAIHLFFLHQLGSNNPLG----MNSNIDKIPFHPYFTFKDLITFILMtsLLIMLC 244
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVF--LGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 245 LINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPYYNKTPFRGIQFYPIN 322
Cdd:COG1290 258 LAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1707765486 323 QLMFWTMVTVVILLTWIGKRPveEPYILTGQILTTIYFLYFII 365
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-365 |
5.56e-85 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 261.84 E-value: 5.56e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 11 LIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASM 90
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 91 FFICIYLHVGRGIYYGSYMYTQTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGFA 170
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 171 VDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSNNPLGMNSNI-DKIPFHPYFTFKDLITFILMTSLLIMLCLINPY 249
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 250 LLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIaLFLSISILMILPYYNKTPFRGIqfypINQLMFWTM 329
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLI 315
|
330 340 350
....*....|....*....|....*....|....*.
gi 1707765486 330 VTVVILLTWIGKRPVEEPYILTGQILTTIYFLYFII 365
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
8.54e-85 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 256.14 E-value: 8.54e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 10 PLIKIINNSLIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 90 MFFICIYLHVGRGIYYGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1707765486 168 GFAVDNATLNRFFTFHFILPFLIIALSAIHLFFLHQLGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
9.88e-77 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 234.97 E-value: 9.88e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 19 LIDLPAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 99 VGRGIYYGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1707765486 177 NRFFTFHFILPFLIIALSAIHLFFLHQLG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
5.71e-49 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 162.80 E-value: 5.71e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 89 SMFFICIYLHVGRGIYYGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 167 GGFAVDNATLNRFFTFHF-ILPFLIIALSAIHLFFLHQLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIMLCL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1707765486 246 INPYLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
3.23e-46 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 155.11 E-value: 3.23e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 208 NPLGMNSNIDKIPFHPYFTFKDLITFILMTSLLIMLCLINPYLLGDPDNFIPANPLVTPIHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765486 288 KLGGVIALFLSISILMILPYYNKTPFRGiQFYPINQLMFWTMVTVVILLTWIGKRPVEEPYILTGQI 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
4.53e-41 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 139.92 E-value: 4.53e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 259 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYNKTPFRGIQFYPINQLMFWTMVTVVILLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1707765486 339 IGKRPVEEPYILTGQILTTIY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-210 |
8.59e-39 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 138.31 E-value: 8.59e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 23 PAPMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMFFICIYLHVGRG 102
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 103 IYYGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGFAVDNATLNRFF 180
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 1707765486 181 TFH-FILPFLIIALSAIHLFFLHQLGSNNPL 210
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
8.52e-31 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 116.74 E-value: 8.52e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 25 PMNISFWWNYGSLLGLCLLIQIMTGIFLTMHYSPNIELAFSSIIHICRDVNNGWIIRTLHSNGASMFFICIYLHVGRGIY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 105 YGSYMYTQ--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGKELVQWVWGGFAVDNATLNRFFTF 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 1707765486 183 H-FILPFLIIALSAIHLFFLHQLGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
203-307 |
3.41e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 58.27 E-value: 3.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 203 QLGSNNPLGMNSNIDKIPFHPYFTFKDLITFILMT-SLLIMLCLINPYLLGDPdnfipANPLVTPIHIQPEWYFLFAYAI 281
Cdd:COG5679 14 KLRAKLEKGMGHNYYGEPAWPNDLLYIFPVVILGTiALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQI 88
|
90 100
....*....|....*....|....*.
gi 1707765486 282 LRSIPNKLGGVIALFLSISILMILPY 307
Cdd:COG5679 89 LRVVPNKLLGIVMMAAIPLGLMLVPF 114
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
234-336 |
2.22e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 55.78 E-value: 2.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 234 ILMT-SLLIMLCLINPYLLGDPdnfipANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPY---YN 309
Cdd:CHL00058 44 ILGTiACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFlenVN 118
|
90 100
....*....|....*....|....*....
gi 1707765486 310 K--TPFRgiqfYPINQLMFWTMVTVVILL 336
Cdd:CHL00058 119 KfqNPFR----RPVATTVFLIGTAVALWL 143
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
238-314 |
1.25e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 53.65 E-value: 1.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765486 238 SLLIMLCLINPYLLGDPdnfipANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPYYN-----KTP 312
Cdd:TIGR01156 49 ACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEnvnkfQNP 123
|
..
gi 1707765486 313 FR 314
Cdd:TIGR01156 124 FR 125
|
|
|