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Conserved domains on  [gi|1707765484|gb|QDP18063|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Phymateus morbillosus]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 1.45e-22

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 83.28  E-value: 1.45e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  4 FSLLTSLFIYFSGVYVFSSKRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDYYFPVVFLVFSVCEGALGLSVLVSMIRS 83
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1707765484 84 YGNDFFNS 91
Cdd:MTH00162  82 HGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 1.45e-22

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 83.28  E-value: 1.45e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  4 FSLLTSLFIYFSGVYVFSSKRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDYYFPVVFLVFSVCEGALGLSVLVSMIRS 83
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1707765484 84 YGNDFFNS 91
Cdd:MTH00162  82 HGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
4-94 1.90e-07

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 44.86  E-value: 1.90e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  4 FSLLTSLFIYFSGVYVFSSkRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDY--YFPVVFLVFSVCEGALGLSVLVSMI 81
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|...
gi 1707765484 82 RSYGNDFFNSFSI 94
Cdd:pfam00420 80 RTHGTDDVDSLNL 92
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 1.45e-22

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 83.28  E-value: 1.45e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  4 FSLLTSLFIYFSGVYVFSSKRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDYYFPVVFLVFSVCEGALGLSVLVSMIRS 83
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*...
gi 1707765484 84 YGNDFFNS 91
Cdd:MTH00162  82 HGNDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-97 3.05e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 59.60  E-value: 3.05e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  6 LLTSLFIYFSGVYVFSSKRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDYYFPVVFLVFSVCEGALGLSVLVSMIRSYG 85
Cdd:MTH00188   6 ILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHG 85

                         90
                 ....*....|..
gi 1707765484 86 NDFFNSFSISLC 97
Cdd:MTH00188  86 SDYVSSLNLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-93 2.98e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 57.16  E-value: 2.98e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  1 MLKFSLLTSLFIYFSGVYVFSSKRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDYYFPVVFLVFSVCEGALGLSVLVSM 80
Cdd:MTH00149   1 SMFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSL 80

                         90
                 ....*....|...
gi 1707765484 81 IRSYGNDFFNSFS 93
Cdd:MTH00149  81 IRLHGNDYVSSLS 93
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 14-97 1.64e-11

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 55.14  E-value: 1.64e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484 14 FSGVYVFSSKRKHLLVVLLSLEYIVLSLFLVIIIYL-FSFDFDYYFPVVFLVFSVCEGALGLSVLVSMIRSYGNDFFNSF 92
Cdd:MTH00013  13 FISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLmFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLKSL 92


                 ....*
gi 1707765484 93 SISLC 97
Cdd:MTH00013  93 TSNKC 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-97 2.24e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 54.85  E-value: 2.24e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  1 MLKFSLLTSLFIYFSGvyvFSSKRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDYYF--PVVFLVFSVCEGALGLSVLV 78
Cdd:MTH00125   3 PTHFSLYTAFMLSLLG---LSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTpmPIILLTFSACEAGTGLALLV 79

                         90
                 ....*....|....*....
gi 1707765484 79 SMIRSYGNDFFNSFSISLC 97
Cdd:MTH00125  80 ATTRTHGSDHLKNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-97 1.00e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 48.06  E-value: 1.00e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  1 MLKFSLLTSLFIYFSGvyvFSSKRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDYYF--PVVFLVFSVCEGALGLSVLV 78
Cdd:MTH00067   3 PTYFTFYSAFLLGLMG---LAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFslPMFMLTFSACEASTGLALMV 79

                         90
                 ....*....|....*....
gi 1707765484 79 SMIRSYGNDFFNSFSISLC 97
Cdd:MTH00067  80 ATTRTHGTDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 24-97 2.03e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 47.27  E-value: 2.03e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765484 24 RKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDYY--FPVVFLVFSVCEGALGLSVLVSMIRSYGNDFFNSFSISLC 97
Cdd:MTH00126  23 RTHLLSALLCLEGMMLSLFIALSLWALQLESTSFsaAPMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 24-97 2.60e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 47.23  E-value: 2.60e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765484 24 RKHLLVVLLSLEYIVLSLFLV--IIIYLFSFDFDYYFPVVFLVFSVCEGALGLSVLVSMIRSYGNDFFNSFSISLC 97
Cdd:MTH00107  23 RSHLMSSLLCLEGMMLSLFIMatLTILNTHFTLASMMPIILLVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
4-94 1.90e-07

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 44.86  E-value: 1.90e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  4 FSLLTSLFIYFSGVYVFSSkRKHLLVVLLSLEYIVLSLFLVIIIYLFSFDFDY--YFPVVFLVFSVCEGALGLSVLVSMI 81
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|...
gi 1707765484 82 RSYGNDFFNSFSI 94
Cdd:pfam00420 80 RTHGTDDVDSLNL 92
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 2-94 3.34e-05

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 39.13  E-value: 3.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  2 LKFSLLTSLFIYFSGVYVFSSKRKHLLVVLLSLEYIVLSLFLVIIIYLFSFD--FDYYFPVVFLVFSVCEGALGLSVLVS 79
Cdd:MTH00043   1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGnfSNLSFSLLLLTLSACEASIGLSLMVL 80

                         90
                 ....*....|....*
gi 1707765484 80 MIRSYGNDFFNSFSI 94
Cdd:MTH00043  81 LSRNHNSDLVASLNL 95
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 7-95 5.44e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 38.39  E-value: 5.44e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765484  7 LTSLFIYFSGVYVFSSKRKHLLVVLLSLEYIVLSLF--LVIIIYLFSFDFDYYFPVVFLVFSVCEGALGLSVLVSMIRSY 84
Cdd:MTH00181   3 FVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFllLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRTH 82

                         90
                 ....*....|.
gi 1707765484 85 GNDFFNSFSIS 95
Cdd:MTH00181  83 GSDHLLKFNLL 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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