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Conserved domains on  [gi|17068421|gb|AAH17590|]
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DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo sapiens]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 3-107 1.56e-45

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 151.84  E-value: 1.56e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAE-----GGC 77
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEqggggGGF 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 17068421   78 TGGRPFEDPFEyvfsfrdpaDVFREFFGGQ 107
Cdd:PRK10767  84 GGGGGFGDIFG---------DIFGDIFGGG 104
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 1.56e-45

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 151.84  E-value: 1.56e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAE-----GGC 77
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEqggggGGF 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 17068421   78 TGGRPFEDPFEyvfsfrdpaDVFREFFGGQ 107
Cdd:PRK10767  84 GGGGGFGDIFG---------DIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 2.39e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 143.12  E-value: 2.39e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421     3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|....
gi 17068421    83 FEDPFEYVFsFRDPADVFREFFGG 106
Cdd:TIGR02349  79 GFNGFDIGF-FGDFGDIFGDFFGG 101
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 1.05e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 115.26  E-value: 1.05e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 17068421     3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-71 1.16e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 115.18  E-value: 1.16e-33
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 17068421   3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEA 71
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHA 68
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 5.30e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 105.78  E-value: 5.30e-31
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421      2 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 1.92e-30

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 113.38  E-value: 1.92e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGgctggrp 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKA--PDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDG------- 76

                         90       100
                 ....*....|....*....|....
gi 17068421   83 fEDPFEYvfsfrDPADVFREFFGG 106
Cdd:NF037946  77 -EGGFGF-----DAFDVFSSFFET 94
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 5.39e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 98.00  E-value: 5.39e-28
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 17068421   3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENkEEAERRFKQVAEAYEVLSD 58
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 1.56e-45

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 151.84  E-value: 1.56e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAE-----GGC 77
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEqggggGGF 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 17068421   78 TGGRPFEDPFEyvfsfrdpaDVFREFFGGQ 107
Cdd:PRK10767  84 GGGGGFGDIFG---------DIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 2.39e-42

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 143.12  E-value: 2.39e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421     3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|....
gi 17068421    83 FEDPFEYVFsFRDPADVFREFFGG 106
Cdd:TIGR02349  79 GFNGFDIGF-FGDFGDIFGDFFGG 101
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-105 7.51e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 137.20  E-value: 7.51e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEG-GCTGGR 81
Cdd:PRK14294   5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGtGFSGFS 83

                         90       100
                 ....*....|....*....|....
gi 17068421   82 PFEDPFEyvfSFrdpADVFREFFG 105
Cdd:PRK14294  84 GFDDIFS---SF---GDIFEDFFG 101
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-107 1.63e-35

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 125.68  E-value: 1.63e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAG----AEGGCT 78
Cdd:PRK14282   5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGeqppYQETES 84

                         90       100
                 ....*....|....*....|....*....
gi 17068421   79 GGRPFEDPFEYVFSFRDpADVFREFFGGQ 107
Cdd:PRK14282  85 GGGFFEDIFKDFENIFN-RDIFDIFFGER 112
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 1.05e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 115.26  E-value: 1.05e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 17068421     3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-71 1.16e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 115.18  E-value: 1.16e-33
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 17068421   3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEA 71
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHA 68
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-105 5.28e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 119.08  E-value: 5.28e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAeGGCTGGRP 82
Cdd:PRK14301   5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV-NGNGGFGG 82

                         90       100
                 ....*....|....*....|....
gi 17068421   83 FEDPfEYVFS-FrdpADVFREFFG 105
Cdd:PRK14301  83 FSSA-EDIFShF---SDIFGDLFG 102
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-106 9.88e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 118.41  E-value: 9.88e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGgrp 82
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA--- 80

                         90       100
                 ....*....|....*....|....
gi 17068421   83 fEDPFEYVfSFRDPADVFREFFGG 106
Cdd:PRK14298  81 -EDIFRGA-DFGGFGDIFEMFFGG 102
PRK14280 PRK14280
molecular chaperone DnaJ;
3-109 1.40e-32

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 118.29  E-value: 1.40e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 17068421   83 FEDPFEYVFSFRdpaDVFREFFGG----QDP 109
Cdd:PRK14280  83 GGGDFGGGFGFE---DIFSSFFGGggrrRDP 110
PRK14289 PRK14289
molecular chaperone DnaJ;
3-106 1.40e-32

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 118.40  E-value: 1.40e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAeGGCTGGRP 82
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV-GGAAGGGG 83

                         90       100
                 ....*....|....*....|....*...
gi 17068421   83 FEDP---FEYVFS-FrdpADVFREFFGG 106
Cdd:PRK14289  84 FSGEgmsMEDIFSmF---GDIFGGHGGG 108
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-107 1.41e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 118.27  E-value: 1.41e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:PRK14276   5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82

                         90       100
                 ....*....|....*....|....*
gi 17068421   83 FEDPFEYVFSFRDPADVFREFFGGQ 107
Cdd:PRK14276  83 GFGGFDGSGGFGGFEDIFSSFFGGG 107
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-106 3.39e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 116.95  E-value: 3.39e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGgctGGRP 82
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGA---GGSN 80

                         90       100
                 ....*....|....*....|....*
gi 17068421   83 FE-DPFEYvfsFRDPADVFREFFGG 106
Cdd:PRK14290  81 FNwDNFTH---FSDINDIFNQIFGG 102
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-139 8.11e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 116.45  E-value: 8.11e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAG-----AEGG- 76
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGvgssaASGGg 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421   77 ---CTGGRPFEDPFEyvfSFRD-----------PADVFREFFGGQDPFSFDLLGNP-----------LENILGGSEELLG 131
Cdd:PRK14281  83 pgyGGGGGDFNDIFS---AFNDmfgggarrgggSPFGFEDVFGGGGRRRRASAGIPgtdlkirlkltLEEIAKGVEKTLK 159


                 ....*...
gi 17068421  132 KQKQSVCT 139
Cdd:PRK14281 160 IKKQVPCK 167
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-134 8.87e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 116.10  E-value: 8.87e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAG--AEGGCTGG 80
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGpfAGAGGFGG 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 17068421   81 RPFEDPFEYVFSFrdpADVFREFFGGQDPFsFDLLGNPLENILGGSEELLGKQK 134
Cdd:PRK14284  81 AGMGNMEDALRTF---MGAFGGEFGGGGSF-FEGLFGGLGEAFGMRGGPAGARQ 130
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-112 1.09e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 116.02  E-value: 1.09e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                         90       100       110
                 ....*....|....*....|....*....|
gi 17068421   83 FEDpfEYVFSFRDPADVFREFFggqDPFSF 112
Cdd:PRK14291  82 QEG--FSDFGGGNIEDILEDVF---DIFGF 106
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-106 3.44e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 114.32  E-value: 3.44e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    4 YYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTG-GRP 82
Cdd:PRK14286   6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGfGQG 84

                         90       100
                 ....*....|....*....|....
gi 17068421   83 FEDPFEYVFSfrDPADVFREFFGG 106
Cdd:PRK14286  85 AYTDFSDIFG--DFGDIFGDFFGG 106
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 5.30e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 105.78  E-value: 5.30e-31
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421      2 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-106 1.54e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 112.97  E-value: 1.54e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:PRK14277   6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                         90       100       110
                 ....*....|....*....|....*....|..
gi 17068421   83 F------EDPFEYVF-SFRDP-ADVFREFFGG 106
Cdd:PRK14277  85 FgqggfgGGGFDFDFgGFGDIfEDIFGDFFGT 116
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 1.92e-30

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 113.38  E-value: 1.92e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGgctggrp 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKA--PDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDG------- 76

                         90       100
                 ....*....|....*....|....
gi 17068421   83 fEDPFEYvfsfrDPADVFREFFGG 106
Cdd:NF037946  77 -EGGFGF-----DAFDVFSSFFET 94
PRK14297 PRK14297
molecular chaperone DnaJ;
3-106 4.02e-30

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 111.80  E-value: 4.02e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEA------GAEGG 76
Cdd:PRK14297   5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTAdfngagGFGSG 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 17068421   77 CTGGRPFEDpfeyvfsFRDPADVFREFFGG 106
Cdd:PRK14297  84 GFGGFDFSD-------MGGFGDIFDSFFGG 106
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-106 4.94e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 111.13  E-value: 4.94e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    1 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAgAEGGCTGG 80
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA-PGAGMPGG 77

                         90       100
                 ....*....|....*....|....*.
gi 17068421   81 RPFEDpfeyvfSFRDPADVFREFFGG 106
Cdd:PRK14292  78 DPFGG------MGFDPMDIFEQLFGG 97
PRK14293 PRK14293
molecular chaperone DnaJ;
1-129 7.85e-29

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 108.15  E-value: 7.85e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    1 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGctGG 80
Cdd:PRK14293   2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA--AG 77

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 17068421   81 RP-------FEDPFEYVFSfrdpadvfreFFGGQ---------------DPFSFDLLGNPLENILGGSEEL 129
Cdd:PRK14293  78 FPdmgdmggFADIFETFFS----------GFGGAggqggrrrrrgpqrgDDLRYDLKLDFREAIFGGEKEI 138
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-107 3.53e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 106.29  E-value: 3.53e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGrp 82
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGG-- 79

                         90       100
                 ....*....|....*....|....*
gi 17068421   83 fedpfEYVFSFRDPADVFREFFGGQ 107
Cdd:PRK14278  80 -----GFGGGFGGLGDVFEAFFGGG 99
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 5.39e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 98.00  E-value: 5.39e-28
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 17068421   3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENkEEAERRFKQVAEAYEVLSD 58
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-107 8.69e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 105.07  E-value: 8.69e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGG------ 76
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGggfegf 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 17068421   77 CTGGRPFEDPFEyvfsfrDPADVFREFFGGQ 107
Cdd:PRK14285  83 SGGFSGFSDIFE------DFGDIFDSFFTGN 107
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-106 2.30e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 104.14  E-value: 2.30e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCT---- 78
Cdd:PRK14283   6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQedif 83

                         90       100
                 ....*....|....*....|....*....
gi 17068421   79 GGRPFEDPFE-YVFSFRDPADVFRefFGG 106
Cdd:PRK14283  84 NNINFEDIFQgFGFGIGNIFDMFG--FGG 110
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-118 3.62e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 102.32  E-value: 3.62e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:PRK14299   5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 17068421   83 fEDPFEYVFS---FRDPADVFREFFGGQDPFS--FDLLGNP 118
Cdd:PRK14299  83 -GPPGGGDFSgfnVGDFSDFFQQLFGGRGGFGgfGDLFGSV 122
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-67 1.07e-26

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 95.56  E-value: 1.07e-26
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 17068421   1 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDR 67
Cdd:COG2214   4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-139 6.38e-26

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 101.05  E-value: 6.38e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    4 YYEVLDVPRQASSEAIKKAYRKLALKWHPDK--NPEnkeeaerRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGr 81
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKggDPE-------KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPA- 101

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17068421   82 pfedpfeyvfsfrDPADVFREFFG----------GQDPFSFdlLGNPLENILGGSEELLGKQKQSVCT 139
Cdd:PTZ00037 102 -------------DASDLFDLIFGggrkpggkkrGEDIVSH--LKVTLEQIYNGAMRKLAINKDVICA 154
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 1.38e-25

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 91.98  E-value: 1.38e-25
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421   3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKR 62
Cdd:COG5407   1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKR 59
PRK14279 PRK14279
molecular chaperone DnaJ;
3-114 1.31e-24

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 97.11  E-value: 1.31e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRp 82
Cdd:PRK14279  10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRR- 87

                         90       100       110
                 ....*....|....*....|....*....|..
gi 17068421   83 fedpfeyvfsFRDPADvFREFFGGQDPFSFDL 114
Cdd:PRK14279  88 ----------FDGGGG-FGGFGTGGDGAEFNL 108
PRK14295 PRK14295
molecular chaperone DnaJ;
3-125 1.68e-24

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 96.84  E-value: 1.68e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDR----YGEAGAEGGCT 78
Cdd:PRK14295  10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYDEarslFGNGGFRPGPG 88

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 17068421   79 GGRPFEDPFeyvfsfrDPADVFREFFGGQDPFSFdllGNPLENILGG 125
Cdd:PRK14295  89 GGGGGGFNF-------DLGDLFGGGAQGGGGAGG---GGGLGDVFGG 125
PRK14288 PRK14288
molecular chaperone DnaJ;
2-97 1.18e-22

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 91.67  E-value: 1.18e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    2 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGR 81
Cdd:PRK14288   3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81

                         90
                 ....*....|....*.
gi 17068421   82 PFEDPFEYVFSFRDPA 97
Cdd:PRK14288  82 DFSDFFEDLGSFFEDA 97
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-105 1.86e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 91.16  E-value: 1.86e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENkeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:PRK14296   5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSP--DAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN 82

                         90       100
                 ....*....|....*....|....*....
gi 17068421   83 FEDpFEYVFS------FRDPADVFREFFG 105
Cdd:PRK14296  83 FGD-FEDLFSnmgssgFSSFTNIFSDFFG 110
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-106 4.92e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 89.68  E-value: 4.92e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEnkEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRP 82
Cdd:PRK14287   5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA 82

                         90       100
                 ....*....|....*....|....
gi 17068421   83 FEdpfeyvfsFRDPADVFREFFGG 106
Cdd:PRK14287  83 GD--------FGGFSDIFDMFFGG 98
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-104 6.87e-22

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 90.26  E-value: 6.87e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421     3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNpeNKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGgctggrp 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDR------- 73

                          90       100
                  ....*....|....*....|..
gi 17068421    83 fEDPFEYvfsfrdPADVFREFF 104
Cdd:TIGR03835  74 -EDDFDF------QADVFNSFF 88
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-106 7.52e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 83.91  E-value: 7.52e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNpeNKEEAERRFKQVAEAYEVLSDAKKRDIYDRYG-------EAGAEG 75
Cdd:PRK14300   4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGhdafqnqQSRGGG 81

                         90       100       110
                 ....*....|....*....|....*....|.
gi 17068421   76 GCTGGrpFEDPFEYVFsfrdpADVFREFFGG 106
Cdd:PRK14300  82 GNHGG--FHPDINDIF-----GDFFSDFMGG 105
PRK10266 PRK10266
curved DNA-binding protein;
3-105 1.07e-18

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 79.87  E-value: 1.07e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENkeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCtgGRP 82
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--DAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQF--NRQ 80

                         90       100
                 ....*....|....*....|...
gi 17068421   83 FEDPFEYVFSFRDPADVFREFFG 105
Cdd:PRK10266  81 FQHGDGQSFNAEDFDDIFSSIFG 103
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 3.25e-17

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 70.98  E-value: 3.25e-17
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 17068421   1 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDK-----NPENKEEAERRFKQVAEAYEVLSDAKKRDI 64
Cdd:COG1076   3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-75 8.35e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 58.64  E-value: 8.35e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 17068421     4 YYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENkeEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEG 75
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 2.38e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 48.49  E-value: 2.38e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 17068421   2 VDYYEVLDVPR---QASSEAIKKAYRKLALKWHPDKNPENKEEAERR-FKQVAEAYEVLSDAKKRDIYD 66
Cdd:COG5269  43 VDLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
3-61 2.42e-06

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 45.19  E-value: 2.42e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 17068421    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDK------NPENKEEAERRFKQVAEAYEVLSDAKK 61
Cdd:PRK09430 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELIKKQKG 265
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 3.16e-05

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 41.40  E-value: 3.16e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    1 MVDYYEVLDVPRQASS--EAIKKAYRKLALKWHPDKnPENKEEAERRFKQVAE---AYEVLSDAKKRDIY 65
Cdd:PRK01356   1 MQNYFQLLGLPQEYNIdlKILEKQYFAMQVKYHPDK-AKTLQEKEQNLIIASElnnAYSTLKDALKRAEY 69
hscB PRK03578
Fe-S protein assembly co-chaperone HscB;
3-65 5.17e-04

Fe-S protein assembly co-chaperone HscB;


Pssm-ID: 235133 [Multi-domain]  Cd Length: 176  Bit Score: 38.08  E-value: 5.17e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17068421    3 DYYEVLDVPRQ--ASSEAIKKAYRKLALKWHPDKNPeNKEEAERRFK-----QVAEAYEVLSDAKKRDIY 65
Cdd:PRK03578   7 DHFSLFGLPARfaLDEAALDAAYRTVQAQVHPDRFA-AAGDAEKRVAmqwatRANEAYQTLRDPLKRARY 75
PHA03102 PHA03102
Small T antigen; Reviewed
 6-34 3.40e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 35.80  E-value: 3.40e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 17068421    6 EVLDVPRQA--SSEAIKKAYRKLALKWHPDK 34
Cdd:PHA03102   9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDK 39
PHA02624 PHA02624
large T antigen; Provisional
 6-34 5.36e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 35.73  E-value: 5.36e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 17068421    6 EVLDVPRQA--SSEAIKKAYRKLALKWHPDK 34
Cdd:PHA02624  15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDK 45
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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