|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.66e-149 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 424.23 E-value: 2.66e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 1 SPLTNLISTTSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHT 80
Cdd:MTH00112 2 NPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 81 GQWDITQLTYPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLLTSHSTNPTLLTTMSITS 160
Cdd:MTH00112 82 GQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 161 IALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLN 240
Cdd:MTH00112 162 TLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLN 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 241 TTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSPKKPV 320
Cdd:MTH00112 242 TTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPKK 321
|
330 340
....*....|....*....|....*
gi 169787757 321 NILIPTLTSLSISLLPLSPTILATI 345
Cdd:MTH00112 322 NTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
3-314 |
1.80e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 353.34 E-value: 1.80e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 3 LTNLISttSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQ 82
Cdd:MTH00135 6 LTILLF--SLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 83 WDITQLTYPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAiLLLTSHSTNPTLLTTMSITSIA 162
Cdd:MTH00135 84 WDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFA-LILQIAPTNPTLLITLGLTSTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 163 LGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLNTT 242
Cdd:MTH00135 163 VGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTAL 242
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169787757 243 LFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQW 314
Cdd:MTH00135 243 TPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPW 314
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
1.55e-119 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 348.45 E-value: 1.55e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 1 SPLTNLISTTSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHT 80
Cdd:MTH00070 2 SPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 81 GQWDITQLTYPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLLTSHSTNPTLLTTMSITS 160
Cdd:MTH00070 82 GEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 161 IALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLN 240
Cdd:MTH00070 162 TLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 241 TTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSPKKPV 320
Cdd:MTH00070 242 SMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKT 321
|
....*
gi 169787757 321 NILIP 325
Cdd:MTH00070 322 NNLLS 326
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
5.71e-110 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 324.11 E-value: 5.71e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 1 SPLTNLISTTSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHT 80
Cdd:MTH00105 2 NPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 81 GQWDITQLTYPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLLTSHSTNPTLLTTMSITS 160
Cdd:MTH00105 82 GQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 161 IALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLN 240
Cdd:MTH00105 162 ILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 241 TTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITLPPNPSN-KMK-QWSPKK 318
Cdd:MTH00105 242 SLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKwQFENTK 321
|
....*..
gi 169787757 319 PVNILIP 325
Cdd:MTH00105 322 PMTLLPT 328
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
2.16e-90 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 274.15 E-value: 2.16e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 1 SPLTNLISTTSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHT 80
Cdd:MTH00200 2 SPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 81 GQWDITQLTYPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLLTSHSTNPTLLTTMSITS 160
Cdd:MTH00200 82 GQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 161 IALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLN 240
Cdd:MTH00200 162 VLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 241 TTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSPKKPV 320
Cdd:MTH00200 242 MLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNS 321
|
....*
gi 169787757 321 NILIP 325
Cdd:MTH00200 322 NLLVG 326
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
10-325 |
2.74e-79 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 246.00 E-value: 2.74e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 10 TSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQLT 89
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 90 YPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLLTSHSTNPTLLTTMSITSIALGGWMGL 169
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 170 NQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLNTTLFLTLLS 249
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169787757 250 LAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSPKKPVNILIP 325
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
3-324 |
2.65e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 186.18 E-value: 2.65e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 3 LTNLISTTSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQhtgq 82
Cdd:MTH00160 5 SSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML---- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 83 wdITQLTYPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPtaiLLLTSHSTNPTLLTTMSITSIA 162
Cdd:MTH00160 81 --NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIILSAI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 163 LGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLNTT 242
Cdd:MTH00160 156 IGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 243 LFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSPKKPVNI 322
Cdd:MTH00160 236 LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLIL 315
|
..
gi 169787757 323 LI 324
Cdd:MTH00160 316 NF 317
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
4-309 |
4.96e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 159.56 E-value: 4.96e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 4 TNLISTTSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSminaqhTGQW 83
Cdd:MTH00011 7 TMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 84 DITQLTYPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLLTSHSTNPTLLTTMSITSIAL 163
Cdd:MTH00011 81 SFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 164 GGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLNTTL 243
Cdd:MTH00011 161 GGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169787757 244 FLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYcSTITLPPNPSN 309
Cdd:MTH00011 241 FIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-324 |
2.08e-45 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 157.74 E-value: 2.08e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 5 NLISTTSLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWD 84
Cdd:MTH00144 6 NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 85 ITqltyppsqLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPtaILLLTSHSTNPTLLTT---MSITSI 161
Cdd:MTH00144 86 SM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 162 ALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTlKLPTLMTSWTKTPMLNT 241
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDS-GSMKDLGSLKPSYKTGL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 242 TLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITlppnpSNKMKQWSPKKPVN 321
Cdd:MTH00144 235 SIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLS-----SSKSKKSNSSKVLN 309
|
...
gi 169787757 322 ILI 324
Cdd:MTH00144 310 SSI 312
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-312 |
1.30e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 144.81 E-value: 1.30e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 11 SLLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTgqwditqLTY 90
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 91 PPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPtaILLLTSHSTNPTLLTTMSITSIALGGWMGLN 170
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 171 QTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILMTTSIFLTLNTTNTLKLPTLMTSWTKTPMLNTTLFLTLLSL 250
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169787757 251 AGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMK 312
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
12-295 |
2.94e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 98.95 E-value: 2.94e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 12 LLLGTTITITSNHWMMAWTGLELNTLAIIPLI-SKSHHPRAIEASTKYFLTQAAASALVLFS-------------SMINA 77
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 78 QHTGQWDITQLTYPPSQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLltSHSTNPTLLTTMS 157
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 158 ITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTII----IYNPKLTLLAFYTYILMTTSIFLTLNTTNTLK--LPTLMT 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169787757 232 SWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRL 295
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
13-297 |
1.67e-22 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 97.88 E-value: 1.67e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 13 LLGTTITITSNHWMMAWTGLELNTLAIIPLIS-KSHHPRAIEASTKYFLTQAAASALVLF-SSMINAQhTGQWDITQL-- 88
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 89 ---TYPPSQLLLTTAI-------AIKLGLTPFHFWFPEVLQGSslttalllstlmklpPTAI------------------ 140
Cdd:COG1007 191 alaAGGANSPLLLLGLvlvlaglAFKLSAVPFHMWTPDVYEGA---------------PTPVtaflatapkiaafaallr 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 141 LLLTSHSTNP----TLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTL--LAFY--TYILMTT 212
Cdd:COG1007 256 LLVEAFPGLAadwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYllAYLFMNL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 213 SIFLTLNTTNTLKLPTLMTS-----WTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLL 287
Cdd:COG1007 336 GAFAVILLLSRKGGEAEEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVI 415
|
330
....*....|
gi 169787757 288 GLFFYLRLAY 297
Cdd:COG1007 416 SAYYYLRVVK 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
22-267 |
3.91e-22 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 94.30 E-value: 3.91e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 22 SNHWMMAWTGLELNTLAIIPLI-SKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQL-TYPP------- 92
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 93 ---SQLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLM-KLPPTAILLLTS--HSTNPT---LLTTMSITSIAL 163
Cdd:pfam00361 81 lllLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLvKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 164 GGWMGLNQTQTRKILAFSSISHLGWMTTII----IYNPKLTLLAFYTYILMTTSIFL-----TLNTTNTLKLPTLMTSWT 234
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 169787757 235 KTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQ 267
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
13-295 |
9.82e-22 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 95.66 E-value: 9.82e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 13 LLGTTITITSNHWMMAWTGLELNTLAIIPLIS-KSHHPRAIEASTKYFLTQAAASALVLF-SSMINAQhTGQWDITQL-- 88
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgMSLLYGA-TGSLSFAGIak 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 89 ----TYPPSQLLLT------TAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILL-------LTSHSTNPT 151
Cdd:PRK05777 192 aladGSGNSLLLLFglvfllVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvvafGGLSEDWQQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 152 LLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTL--LAFY--TYILMTTSIF--LTLNTTNTLK 225
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYllAYLFMTLGAFgvISLLRRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169787757 226 LPTLmTSWT----KTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRL 295
Cdd:PRK05777 352 AESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-296 |
1.77e-19 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 88.85 E-value: 1.77e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 13 LLGTTITITSNHWMMAWTGLELNTLAIIPLIS-KSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQLTYP 91
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 92 PSQ------------LLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILL-------LTSHSTNPTL 152
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 153 LTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLA--FY--TYILMTTSIFLTLNTTNTLKLP- 227
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYifIYALMSLGAFGVLSLLRSYKDEw 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 169787757 228 ----TLMTSWTKT-PMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLA 296
Cdd:TIGR01770 352 ieyiSDFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
1-295 |
4.68e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 87.76 E-value: 4.68e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 1 SPLTNLIsttsLLLGTTITITSNHWMMAWTGLELNTLAIIPLIS-KSHHPRAIEASTKYFLTQAAASALVLFSSMINAQH 79
Cdd:MTH00199 99 SPILILI----VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGL 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 80 TGQWDITQLTYPPS----QLLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLLTSHSTNPTLLTt 155
Cdd:MTH00199 175 TGETSIQGINSILTgdvgKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC- 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 156 mSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNP----KLTLLAFYTYILMTT---SIFLTLNTTNTLKLPT 228
Cdd:MTH00199 254 -AVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSIcsfSIILSLKLTKGLIVEV 332
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 169787757 229 LMTSwTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRL 295
Cdd:MTH00199 333 SGLS-RKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
12-295 |
1.56e-15 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 77.11 E-value: 1.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 12 LLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQL--- 88
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaar 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 89 --TYPPSQL-----LLTTAIAIKLGLTPFHFWFPEVlqgsslttalllstlMKLPPTAI--------------------- 140
Cdd:COG0651 196 laELDPGLLlaafaLLLVGFGIKAALFPLHFWLPDA---------------YPAAPSPVsallsglltkvgvyailrvlt 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 141 LLLTSHSTNP--TLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTT-IIIYNPKLTLLAFY---TYILMTTSI 214
Cdd:COG0651 261 LLFGADPALFlgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLGLAGALFhllNHALAKALL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 215 FLT----LNTTNTLKLPTLMTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLF 290
Cdd:COG0651 341 FLAagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLA 420
|
....*
gi 169787757 291 FYLRL 295
Cdd:COG0651 421 YFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
14-295 |
1.19e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 74.90 E-value: 1.19e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 14 LGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAI---------EASTKYFLTQAAASALVLFSSMINAQHTGQ-- 82
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 83 --WDITQLTYPPSQ----------LLLTTAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMKLppTAILLLTSHSTNP 150
Cdd:MTH00198 279 mlGTILSATLETTNielrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 151 TLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYILM-TTSIFLTLNTTNTL----- 224
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTyLVSALASFTVICTLeefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 225 -------------------KLPTLMTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLS 285
Cdd:MTH00198 437 rtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 169787757 286 LLGL-------FFYLRL 295
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
50-262 |
1.00e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 56.55 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 50 RAIEASTKYFLTQAAASALVL--FSSM--INAQHTGQWDI------TQLTYPPSQLL----LTTAIAIKLGLTPFHFWFP 115
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 116 EVLQGSSLTTALLLSTLMKLPPTAIL-----LLTSHSTNP--TLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGW 188
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALAtrifdIPFYFSSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 189 -MTTIIIYNPKLTLLAFYTYilMTTSIFLTLNTTNTLKLPTLMT----------SWTKTPMLNTTLFLTLLSLAGLPPLT 257
Cdd:CHL00049 319 vIIGIIVGDSNDGYASMITY--MLFYIFMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSLGGIPPLA 396
|
....*
gi 169787757 258 GFLPK 262
Cdd:CHL00049 397 GFFGK 401
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-297 |
2.19e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 52.19 E-value: 2.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 32 LELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQLT--YPPSQLLLT------TAIAI 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 104 KLGLTPFHFWFPEvlqgsslttalllstLMKLPPTAILLLTS-------------------------HSTNPTLLTTMSI 158
Cdd:PRK08375 215 KAAVFPLHTWLPR---------------AYPAAPPVVTALLSglvtkvavyaliriyftvfggdfrfALGLGWLLAVLAL 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 159 TSIALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLA--FY---------TYILMTTSIFLTLNTTNTLKLP 227
Cdd:PRK08375 280 LSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHllhhalmkgALFLAAGAIEVTYGTRRLSELS 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 228 TLMTswtKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAY 297
Cdd:PRK08375 360 GLGR---RMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
29-297 |
2.64e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 52.31 E-value: 2.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 29 WTGLELNTLAIIPLISKshhpRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQ----LTYPPSQ-------LLL 97
Cdd:PRK08668 127 WEIMTFSSFMMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqgLINDTSTgfalivfLFL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 98 TTAIAIKLGLTPFHFWFPE-----------VLQGSSLTT-ALLLSTLMKLPPTAILLLT-----SHSTNPTLLTTMSITS 160
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLgAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNIS 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 161 IALGGWMGLNQTQTRKILAFSSISHLGWmttIIIYNPKLTLLAF-------YTYILMTTSIFLTLNT----TNTLKLPTL 229
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhvFNHALFKGLFFLIFAAviyrTGTTKISEM 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 169787757 230 MTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAY 297
Cdd:PRK08668 360 GGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
37-190 |
4.76e-07 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 51.24 E-value: 4.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 37 LAIIP---LISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQW-----DITQLTYPPSQ-----LLLTTAIAI 103
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTAqlllfLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 104 KLGLTPFHFWFPEVLQGSSlttalllstlmklPPTAILL---------------------LTSHSTNPTLLTtMSITSIA 162
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAP-------------TAGSVLLagvllkmggygllrfalplfpEASAYFAPLLAA-LGVIGII 287
|
170 180
....*....|....*....|....*...
gi 169787757 163 LGGWMGLNQTQTRKILAFSSISHLGWMT 190
Cdd:COG1008 288 YGALVALAQTDLKRLIAYSSVSHMGFVL 315
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
78-262 |
1.75e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.92 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 78 QHTGQWDITQL-TYPPSQLLLTTAIAI-------KLGLTPFHFWFPEVLQGSSLTTALLLSTLM---------KLPPTAi 140
Cdd:PRK12644 182 QAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPGF- 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 141 llltSHST--NPTLLTTMSITSIaLGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYI----LMTTSI 214
Cdd:PRK12644 261 ----ADVPvwRPTVLVLGLATML-LGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLlahaLFKAAL 335
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 169787757 215 FLTL----NTTNTLKLPTLMTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPK 262
Cdd:PRK12644 336 FLVVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
49-287 |
3.29e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 48.40 E-value: 3.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 49 PRAIEASTKYFLTQAAASALVLfSSMINAQHTGQW-----DITQLTYPPS-QLLLTTAI----AIKLGLTPFHFWFPEV- 117
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLML-LAILGLYFLGGGtfdllELLNLPLPFGvQTWLFLAFfiafAVKVPLFPLHTWLPDAh 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 118 LQGSSLTTALLLSTLMKLPPTAILLLT------SHSTNPTLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTT 191
Cdd:TIGR01972 231 VEAPTAGSVILAGVLLKMGTYGFLRFNlplfpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 192 -IIIYNPKLTLLAFYTYI---LMTTSIFLTLNT----TNTLKLPTLMTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKW 263
Cdd:TIGR01972 311 gIFSFNELGISGAVFQMIshgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....
gi 169787757 264 LIIQELTKqeMTPTATIISMLSLL 287
Cdd:TIGR01972 391 LILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-317 |
4.19e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 48.17 E-value: 4.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 32 LELNTLAIIPLIS-KSHHPRAIEASTKYFLTQAAASALVLFSSminAQHTGQWDITQLTYPPSQL-------------LL 97
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAVKMsenptvvakialaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 98 TTAIAIKLGLTPFHFWFPE--------VLQGSSLTTALLLSTLMKLPPTAILLLTSHSTNPTLLTTMSITSIALGGWMGL 169
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDaypaapssISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 170 NQTQTRKILAFSSISHLGWM---TTIIIYNPKLTLLAFYTYILMTTSIFLTLN-----------------TTNTLKLPTL 229
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllgLGVGLAALGDPAMASYGEIALAGGIYHIVNhalykallfltagaviyETGTRNLNEL 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 230 MTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQelTKQEMTPTATIISML-SLLGLFFYLRLAYcSTITLPPNPS 308
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIgSVLTLASFVKVFH-TAFFGPPSEK 463
|
....*....
gi 169787757 309 NKMKQWSPK 317
Cdd:PRK08376 464 VMNVKEPPK 472
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
49-262 |
5.85e-06 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 47.74 E-value: 5.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 49 PRAIEASTKYFLTQAAASALVLF-SSMINAQHTGQWDIT----QLTYPPSQLLLTT------AIAIKLGLTPFHFWFPEV 117
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSaialALITSPSLGLALAlvfviaGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 118 LQGSSLTTALLLSTLMKLP--PTAILLLTSHSTNPT-----LLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMT 190
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfALAIRLLVTAFPSFDeqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 191 TIIIYNPK--LTLLAFY--TYILMT----TSIFLTLNTTNTLKLPTLMTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPK 262
Cdd:PRK02504 317 IGLVAGTEagYASMVFYllAYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
28-262 |
7.64e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 47.73 E-value: 7.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 28 AWtglELNTLAIIPLISKSHhPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQLTYPPS---QLLLTTAIAIK 104
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaeKPGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 105 LGLT--------PFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILLLTS--HSTNPT---LLTTMSITSIALGGWMGLNQ 171
Cdd:PRK12650 214 IAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 172 TQTRKILAFSSISHLGWM-TTIIIYNP-KLTLLAFYT--YILMTTSIFLTL----NTTNTLKLPTLMTSWTKTPMLNTTL 243
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvATIGVGTPfALTAAVVHTlaHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250
....*....|....*....
gi 169787757 244 FLTLLSLAGLPPLTGFLPK 262
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSK 392
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
12-193 |
3.61e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.52 E-value: 3.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 12 LLLGTTITITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAA------SALVLFSSMINAQHTGQWDI 85
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 86 TQLT-----YPPSQLLLT-----TAIAIKLGLTPFHFWFPEVLQGSSLTTALLLSTLMK-------LPPTAILLLTS-HS 147
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLnigiygiLRLSALLRQSGaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 169787757 148 TNPTLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTII 193
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGI 316
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
19-191 |
4.88e-05 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 44.92 E-value: 4.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 19 TITSNHWMMAWTGLELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSS----------MINAQHTGQWdiTQL 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAILW--TEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 89 TYPPSQL---LLTTAIAI-------KLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLMKlpptaILLLTSHS 147
Cdd:PRK06458 202 LKHASLLdptLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYY-----ILIDAAIG 276
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 169787757 148 TNP--TLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTT 191
Cdd:PRK06458 277 SDFpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
37-190 |
6.59e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 41.34 E-value: 6.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 37 LAIIP---LISKSHHPRAIEASTKYFLTQAAASALVLFSSM----INAQHTGQWDITQLTYPP----SQLLLTTAI---- 101
Cdd:PRK05846 142 AMLIPmyfLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPlppgVQYWLFLAFfiaf 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 102 AIKLGLTPFHFWFPE-----------VLQGSSLTTALLLSTLMKLPptaILLLTSHSTNPtLLTTMSITSIALGGWMGLN 170
Cdd:PRK05846 222 AVKMPMFPLHTWLPDahvqaptagsvLLAGILLKMGAYGLLRFSLP---LFPDASHEFAP-IIITLGVIAIIYGALVALA 297
|
170 180
....*....|....*....|
gi 169787757 171 QTQTRKILAFSSISHLGWMT 190
Cdd:PRK05846 298 QTDIKKLIAYSSISHMGFVT 317
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
151-266 |
7.44e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 41.26 E-value: 7.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 151 TLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYI----LMTTSIFLTLNTT----N 222
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSIsyhfG 359
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 169787757 223 TLKLPTLMTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLII 266
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-262 |
9.13e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.97 E-value: 9.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 47 HHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQLTYPPS--------QLLLTTAIAIKLGLT------PFHF 112
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSElienikghPLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 113 WFPEVLQGSSLTTALLLSTLMkLPPTAILLLTSH---STNPTLLTTMSITSIA---LGGWMGLNQTQTRKILAFSSISHL 186
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHpifSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 187 GWMTTIIIYN----PKLTLLAfYTYILMTTSIF---------LTLNTTNTLKLPTLMTSWTKTPMLNTTLFLTLLSLAGL 253
Cdd:PRK12649 315 AYLMTMYGYTtyhePGLGVAA-ATFHLLNHATFkaclflvagIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGI 393
|
....*....
gi 169787757 254 PPLTGFLPK 262
Cdd:PRK12649 394 PPLNGFLSK 402
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
20-297 |
1.16e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 40.52 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 20 ITSNHWMMAWTGLELNTLAIIPLISKSHH-PRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQL-----TYPPS 93
Cdd:COG1009 128 VLSDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSS 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 94 QLLLTTAIAI------KLGLTPFHFWFPEVLQGsslttalllstlmklpPTAI----------------------LLLTS 145
Cdd:COG1009 208 PLLTLILLLLllgafgKSAQFPLHFWLPDAMEG----------------PTPVsallhaatmvkagvyllarlspLFALS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 146 HSTNPTLLTTMSITSIaLGGWMGLNQTQTRKILAFSSISHLGWMTTII---IYNPKLTLL---AFY--TYILMTTSIFLT 217
Cdd:COG1009 272 PVWLTVVAIIGAITAL-FAALIALAQTDIKRVLAYSTVSQLGYMFLALgvgAYVAALFHLlthAFFkaLLFLGAGSVIHA 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 218 LNTTNTLKLPTLmtsWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQE-LTKQEMTPTATIISML-SLLGLFFYLRL 295
Cdd:COG1009 351 TGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRL 427
|
..
gi 169787757 296 AY 297
Cdd:COG1009 428 FF 429
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-187 |
2.21e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 39.63 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 54 ASTKYFLTQAAASALVLFSSMINAQHTGQ--WDITQLT---YPPS-QLLLTT----AIAIKLGLTPFHFWFPE------- 116
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLAlELLLYAgfliAFGVKLPIFPLHTWLPDahgeasa 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169787757 117 ----VLQGSSLTTALLLSTLMKLPptaiLLLTSHSTNPTLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLG 187
Cdd:PRK12561 218 pvsmILAGVLLKMGGYALIRFNVQ----MLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
33-307 |
2.30e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 33 ELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQLTY-----PPSQLLLTTAIAIKLG- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNallvnPTSPVIYGGLLLLIFGl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 107 -----LTPFHFWFPEVLQGSSLTTALLLSTLMKLPPTAILL--------LTSHSTNPTLLTTMSITSIALGGWMGLNQTQ 173
Cdd:PRK06277 210 lygsgLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 174 TRKILAFSSISHLGWMTTIIIYNPKLTLLA--FYT--YILMTTSIFLTL-------NTTNTLKLPTLMTSwtkTPMLNTT 242
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAgiFHAinHVIYKSALFLGAgivsyrtKTSNLRKLGGLLPV---MPVVAFM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169787757 243 LFLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTPTATIISMLSLLGLFFYLRLAYcsTITLPPNP 307
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-270 |
3.47e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 39.16 E-value: 3.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 32 LELNTLAIIPLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDITQL-TYPPSQL-LLTTAIAIKLGLTP 109
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLaTADPEAFaLIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 110 FHFWFPEVlqgsslttalllstlMKLPPTAILLLTS-----------------HSTNPTLLTTMSITSIALGGWMGLNQT 172
Cdd:PRK07234 203 SGLWLPLT---------------HSEAEPPVSALLSgvvvkagvfplvrcaldVPGLDLIVRIFGVGTALLGVLFALLEK 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 173 QTRKILAFSSISHLGWmttiIIYNPKLTLLAFYTYILMTTSIFL---TLNTTNTLKLPTLMT-SWTKTPMlnttlFLTLL 248
Cdd:PRK07234 268 DLKRMLAFSTISQLGF----ILAAPLVGGLYALAHGLVKSTLFLcagALPSRNFTELISQMLgIGKWIPL-----TMASF 338
|
250 260
....*....|....*....|..
gi 169787757 249 SLAGLPPLTGFLPKWLIIQELT 270
Cdd:PRK07234 339 SIAGFPLLAGFVSKVLTLKNLL 360
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
151-288 |
4.86e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 38.75 E-value: 4.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 151 TLLTTMSITSIALGGWMGLNQTQTRKILAFSSISHLGWMTTIIIYNPKLTLLAFYTYI----LMTTSIFLTLNT----TN 222
Cdd:PRK12647 260 TILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIidheTG 339
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169787757 223 TLKLPTLMTSWTKTPMLNTTLFLTLLSLAGLPPLTGFLPKWLIIQELTkqEMTPTATIISMLSLLG 288
Cdd:PRK12647 340 TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
12-119 |
9.14e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 37.76 E-value: 9.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169787757 12 LLLGTTITITSNHW---MMAW--TGLELNTLaiipLISKSHHPRAIEASTKYFLTQAAASALVLFSSMINAQHTGQWDIT 86
Cdd:PRK08168 109 VLAAVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 169787757 87 QL--------TYPPSQ---LLLTTAIAIKLGLTPFHFWFPEVLQ 119
Cdd:PRK08168 185 ALwahlaaqgASPSLQaaaLLLVLAVILKTAQLPVHGWLIQVME 228
|
|
|