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Conserved domains on  [gi|169649038|gb|ACA62603|]
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NADH dehydrogenase subunit 5, partial (mitochondrion) [Zaprionus sepsoides]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND5 super family cl33362
NADH dehydrogenase subunit 5; Provisional
 1-216 1.09e-66

NADH dehydrogenase subunit 5; Provisional


The actual alignment was detected with superfamily member MTH00165:

Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 214.62  E-value: 1.09e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00165 358 FYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSML 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPYMICLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKSLIYYNLTMFLGSMWFMPIISTYKLIYFPLNYGNL 160
Cdd:MTH00165 438 SWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSL 517

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 169649038 161 VLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILLNFLL 216
Cdd:MTH00165 518 SLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-216 1.09e-66

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 214.62  E-value: 1.09e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00165 358 FYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSML 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPYMICLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKSLIYYNLTMFLGSMWFMPIISTYKLIYFPLNYGNL 160
Cdd:MTH00165 438 SWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSL 517

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 169649038 161 VLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILLNFLL 216
Cdd:MTH00165 518 SLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 34-212 4.64e-50

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 160.79  E-value: 4.64e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   34 YSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSMLNWLIFPYPYMICLPLYMKLLTLFVCISGGLFGY 113
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  114 LMSFMKLYNLNKSLiYYNLTMFLGSMWFMPIISTYKLIYFPLNYGNLVLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMH 193
Cdd:pfam06455  81 ELSNLSNKQLKKSL-NFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159

                         170
                  ....*....|....*....
gi 169649038  194 NNNLKIYLLLFVLWVLILL 212
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLL 178
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-115 4.31e-04

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 40.52  E-value: 4.31e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMIS-NINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSM 79
Cdd:COG1009  389 FFSKEAILEAALEAgGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLL 468

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 169649038  80 LNWL---------IFPYPYMICLPLYMKLLTLFVCISGGLFGYLM 115
Cdd:COG1009  469 LPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-216 1.09e-66

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 214.62  E-value: 1.09e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00165 358 FYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSML 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPYMICLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKSLIYYNLTMFLGSMWFMPIISTYKLIYFPLNYGNL 160
Cdd:MTH00165 438 SWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSL 517

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 169649038 161 VLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILLNFLL 216
Cdd:MTH00165 518 SLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 34-212 4.64e-50

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 160.79  E-value: 4.64e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   34 YSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSMLNWLIFPYPYMICLPLYMKLLTLFVCISGGLFGY 113
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  114 LMSFMKLYNLNKSLiYYNLTMFLGSMWFMPIISTYKLIYFPLNYGNLVLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMH 193
Cdd:pfam06455  81 ELSNLSNKQLKKSL-NFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159

                         170
                  ....*....|....*....
gi 169649038  194 NNNLKIYLLLFVLWVLILL 212
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLL 178
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
 1-215 6.23e-32

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 121.49  E-value: 6.23e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00151 355 FYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLL 434

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPYMICLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKSLIYYnltmFLGSMWFMPIISTYKLIYFPLNYGNL 160
Cdd:MTH00151 435 QSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLSF----FFSSMWFLSPLSSQPLKSLSLKLSNS 510

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 169649038 161 VLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILLNFL 215
Cdd:MTH00151 511 SMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
 1-215 1.27e-30

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 117.82  E-value: 1.27e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00209 354 FYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVM 433

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPYMICLPLYMKLLTLFVCISGGlfgyLMSFMKLYNLNKSLIYYNLTMFLGSMWFMPIISTYKLIYFPLNYGNL 160
Cdd:MTH00209 434 SWVMVPSVNSVVLPWFLKLLPIMLILFGV----LLMYMVLKKNFFLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKT 509

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 169649038 161 VLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILLNFL 215
Cdd:MTH00209 510 MLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
 1-212 3.38e-28

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 111.01  E-value: 3.38e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00207 358 FYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSAL 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPYMICLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKSLIYYNLTMFLGSMWFMPIISTYKLIYFPLNYGNL 160
Cdd:MTH00207 438 NWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHN 517

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 169649038 161 VLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILL 212
Cdd:MTH00207 518 YLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIII 569
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
 1-218 1.06e-22

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 95.42  E-value: 1.06e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00208 415 FYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFF 494

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPyMICLPLYMKLLTLFVCISGGLFgylmSFMKLYNLNKSLIYYNLTMFLGSMWFMPIISTYKLIYFPLNYG-N 159
Cdd:MTH00208 495 SNFVFNLP-PLTLPLILKSLPLIVTIIGAAF----SFSFLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSlF 569

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 169649038 160 LVLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILLNFLLFV 218
Cdd:MTH00208 570 GSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLII 628
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
 1-217 1.09e-18

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 83.85  E-value: 1.09e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00211 383 FFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFII 462

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPYMI-CLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKSliyynLTMFLGSMWFMPIISTYKLIYFPLNYG- 158
Cdd:MTH00211 463 TSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTS-----TLSFSNMLGYYPPIIHRLLPKLSLKWGq 537

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 169649038 159 NLVLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILLNFLLF 217
Cdd:MTH00211 538 TLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLL 596
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
 1-215 1.29e-13

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 69.17  E-value: 1.29e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00066 386 FFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLI 465

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPYPYMI-CLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKSLIYynltMFLGSMWFMPIISTYKLIYFPLNYG- 158
Cdd:MTH00066 466 IFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMH----SFSNLLAFFPTIIHRLSPKTNLNSGq 541

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 169649038 159 NLVLKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILLNFL 215
Cdd:MTH00066 542 NIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
 1-212 2.57e-12

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 65.19  E-value: 2.57e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00004 388 FYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLI 467

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 NWLIFPY-PYMICLPLYMKLLTLFVCISGGLFGYLMSFM----------KLYNLNKSLIYYNLTMF-LGSMWFMPI---I 145
Cdd:MTH00004 468 SSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMtttltppkqnTLHNFSNQLAFFNPLTHrLLPMTLLKSsqkI 547

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 169649038 146 STYkLIyfplnygnlvlksfDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILL 212
Cdd:MTH00004 548 ATH-LI--------------DLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLLL 599
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
 1-212 2.71e-09

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 56.24  E-value: 2.71e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCS--SLNMLNDEGWIMLRGMLGLLFMSIIGGS 78
Cdd:MTH00020 389 FYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKkaVFFHLHEGDWNLLLPLGILALGSIFVGY 468

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  79 MLNWLIFPYPYMI--CLPLYMKLLTLFVCISGGLFGYLMSF--MKLYNLNKSLIYYNLTMFLGSMWFMPIISTYKLIYFP 154
Cdd:MTH00020 469 LAKEMIWSFQITLppIVPLSIKLLPVFLSLGGIGLVIILYFysSKTFRVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKI 548

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 169649038 155 LNYGNLV-LKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILL 212
Cdd:MTH00020 549 WKGGHLIsYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFI 607
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
 1-212 8.36e-09

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 55.01  E-value: 8.36e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLN--DEGWIMLRGMLGLLFMSIIGGS 78
Cdd:MTH00210 390 FYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGY 469

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  79 MLNWLIFPYPYMICLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKS------LIYYNLTMFLGSMWFMPIISTYKLIY 152
Cdd:MTH00210 470 LGKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISrrgvsiRLYHVIYTFLNSAWQFNYVINHFIVK 549

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 169649038 153 FPLNYGNLV-LKSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILL 212
Cdd:MTH00210 550 NIWKFGHLItYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFTTLFI 610
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
 1-108 4.53e-07

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 49.47  E-value: 4.53e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00108 389 FYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLI 468

                         90       100       110
                 ....*....|....*....|....*....|
gi 169649038  81 NWLIFP--YPYMIcLPLYMKLLTLFVCISG 108
Cdd:MTH00108 469 SNNIPPttIPQMT-MPLYLKLTALAVTILG 497
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
 1-115 9.71e-05

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 42.45  E-value: 9.71e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNiNMFSFFLYFFSTGLTVCYSFRLVYYSMTGDlncsslNMLNDE-----GWIMLRGMLGLLFMSII 75
Cdd:PRK06590 396 FFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLVFHGK------EKEKIHhphesPAVMTLPLIVLAVLSVF 468

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 169649038  76 GG-----SMLNWLIFPYPY-----MICLPLYMKLLTLFVCISGGLFGYLM 115
Cdd:PRK06590 469 AGalivpPFLGVLPLTTELahgeaEHHLPVWVALLPLVVALAGIALAWLL 518
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-115 4.31e-04

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 40.52  E-value: 4.31e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMIS-NINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSM 79
Cdd:COG1009  389 FFSKEAILEAALEAgGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLL 468

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 169649038  80 LNWL---------IFPYPYMICLPLYMKLLTLFVCISGGLFGYLM 115
Cdd:COG1009  469 LPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
 19-212 6.89e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 39.94  E-value: 6.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  19 FSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSMLNWLI-----------FPY 87
Cdd:MTH00032 460 FAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIqdiligdiehpIVP 539

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  88 PYMICLPLYMKLLTLFVCISGGLFGYLMSFMKLYNLNKSLIYYNLTMFLGSMW-FMPIIStyKLIYFPL-NYGNL-VLKS 164
Cdd:MTH00032 540 PLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWqGDHLIN--KLVAIPLfSFGHWgIYKT 617

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 169649038 165 FDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVLWVLILL 212
Cdd:MTH00032 618 LDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLSFTIIFL 665
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
 1-206 4.32e-03

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 37.50  E-value: 4.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038   1 FYSKDMILEVVMISNINMFSFFLYFFSTGLTVCYSFRLVYYSMTGDLNCSSLNMLNDEGWIMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00137 394 FFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLI 473

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649038  81 --NWLIFPYPYMiCLPLYMKLLTLFVCISGGLFGYLMSFM--KLYNLNKSLIYYNLTMFLGsmwFMPII---STYKLiyf 153
Cdd:MTH00137 474 tsNILPLKTPVM-TMPPLLKLAALIVTILGLLIALELASLtnKQFKPTPTLPPHHFSNMLG---FFPAIihrLTPKL--- 546

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 169649038 154 plnygNLVL------KSFDQGWSEYFGGQNLYQKLVKYSQILFLMHNNNLKIYLLLFVL 206
Cdd:MTH00137 547 -----NLTLgqtiatQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTLFLL 600
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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