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Conserved domains on  [gi|169649031|gb|ACA62599|]
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NADH dehydrogenase subunit 5, partial (mitochondrion) [Scaptodrosophila pattersoni]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND5 super family cl33362
NADH dehydrogenase subunit 5; Provisional
 1-216 7.02e-66

NADH dehydrogenase subunit 5; Provisional


The actual alignment was detected with superfamily member MTH00165:

Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 212.69  E-value: 7.02e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00165 358 FYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSML 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPYMICLPVYMKLLTLFVCIVGGALGYLISVSNLYTLNKSFLNYKISFFLGSMWFMPYISTYGLIFYPLNYGQV 160
Cdd:MTH00165 438 SWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSL 517

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 169649031 161 IIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILILFNFYI 216
Cdd:MTH00165 518 SLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-216 7.02e-66

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 212.69  E-value: 7.02e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00165 358 FYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSML 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPYMICLPVYMKLLTLFVCIVGGALGYLISVSNLYTLNKSFLNYKISFFLGSMWFMPYISTYGLIFYPLNYGQV 160
Cdd:MTH00165 438 SWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSL 517

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 169649031 161 IIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILILFNFYI 216
Cdd:MTH00165 518 SLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 34-212 1.86e-56

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 176.97  E-value: 1.86e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   34 YSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSMLNWLIFPSPYMICLPVYMKLLTLFVCIVGGALGY 113
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  114 LISVSNLYTLNKSfLNYKISFFLGSMWFMPYISTYGLIFYPLNYGQVIIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQ 193
Cdd:pfam06455  81 ELSNLSNKQLKKS-LNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159

                         170
                  ....*....|....*....
gi 169649031  194 NNSLKIYLLLFVFWILILF 212
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLL 178
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-115 3.08e-05

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 43.99  E-value: 3.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFST-GLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSM 79
Cdd:COG1009  389 FFSKEAILEAALEAGGLGPLLLAVALLGaFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLL 468

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 169649031  80 LNWL---------IFPSPYMICLPVYMKLLTLFVCIVGGALGYLI 115
Cdd:COG1009  469 LPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-216 7.02e-66

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 212.69  E-value: 7.02e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00165 358 FYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSML 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPYMICLPVYMKLLTLFVCIVGGALGYLISVSNLYTLNKSFLNYKISFFLGSMWFMPYISTYGLIFYPLNYGQV 160
Cdd:MTH00165 438 SWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSL 517

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 169649031 161 IIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILILFNFYI 216
Cdd:MTH00165 518 SLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 34-212 1.86e-56

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 176.97  E-value: 1.86e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   34 YSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSMLNWLIFPSPYMICLPVYMKLLTLFVCIVGGALGY 113
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  114 LISVSNLYTLNKSfLNYKISFFLGSMWFMPYISTYGLIFYPLNYGQVIIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQ 193
Cdd:pfam06455  81 ELSNLSNKQLKKS-LNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159

                         170
                  ....*....|....*....
gi 169649031  194 NNSLKIYLLLFVFWILILF 212
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLL 178
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
 1-210 1.82e-33

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 125.91  E-value: 1.82e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00209 354 FYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVM 433

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPYMICLPVYMKLLTLFVCIVGGALGYLISVSNLYTLNKsflnYKISFFLGSMWFMPYISTYGLIFYPLNYGQV 160
Cdd:MTH00209 434 SWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKG----YKVNYFLSQMWFLPDLSSQPVNKFTMKLSKT 509

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 169649031 161 IIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILI 210
Cdd:MTH00209 510 MLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLG 559
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
 1-212 2.12e-31

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 120.25  E-value: 2.12e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00207 358 FYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSAL 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPYMICLPVYMKLLTLFVCIVGGALGYLISVSNLYTLNKSFLNYKISFFLGSMWFMPYISTYGLIFYPLNYGQV 160
Cdd:MTH00207 438 NWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHN 517

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 169649031 161 IIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLL-FVFWILILF 212
Cdd:MTH00207 518 YLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMsFVLLTIIII 570
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
 1-215 3.42e-27

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 108.01  E-value: 3.42e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00151 355 FYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLL 434

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPYMICLPVYMKLLTLFVCIVGGALGYLISVSNLYTLNKSflnyKISFFLGSMWFMPYISTYGLIFYPLNYGQV 160
Cdd:MTH00151 435 QSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMV----KLSFFFSSMWFLSPLSSQPLKSLSLKLSNS 510

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 169649031 161 IIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILILFNFY 215
Cdd:MTH00151 511 SMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
 1-218 1.96e-18

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 83.08  E-value: 1.96e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00211 383 FFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFII 462

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPYMI-CLPVYMKLLTLFVCIVGGALGYLISvsnlyTLNKSFLNYKISFFLGSMWFMPYISTYGLIFYPLNYGQ 159
Cdd:MTH00211 463 TSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLELV-----NLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQ 537

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031 160 VII-KSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILILFNFYIFL 218
Cdd:MTH00211 538 TLStHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLLF 597
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
 1-218 4.86e-18

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 81.94  E-value: 4.86e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00208 415 FYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFF 494

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPyMICLPVYMKLLTLFVCIvggaLGYLISVSNLYTLNKSFLNYKISFFLGSMWFMPYISTYGLIFYPLNYG-Q 159
Cdd:MTH00208 495 SNFVFNLP-PLTLPLILKSLPLIVTI----IGAAFSFSFLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSlF 569

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 169649031 160 VIIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILILFNFYIFL 218
Cdd:MTH00208 570 GSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLII 628
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
 1-212 2.72e-13

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 68.01  E-value: 2.72e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00066 386 FFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLI 465

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPSPYMI-CLPVYMKLLTLFVCIvggaLGYLISVSNLYTLNKSFLNYKISFFLGSMWFMPYISTYGLIFYPLNYGQ 159
Cdd:MTH00066 466 IFNILPMKPQIlTMPTFMKLAALLVTL----LGLLIALDLAKITSKTTPKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQ 541

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 169649031 160 VIIKS-FDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILILF 212
Cdd:MTH00066 542 NIATHlTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLML 595
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
 1-217 3.34e-09

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 56.17  E-value: 3.34e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLN--DEGWVMLRGMLGLLFMSIIGGS 78
Cdd:MTH00210 390 FYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGY 469

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  79 MLNWLIFPSPYMICLPVYMKLLTLFVCIVGGALGYLISVSNLYTLNKS------FLNYKISFFLGSMWFMPYISTYGLIF 152
Cdd:MTH00210 470 LGKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISrrgvsiRLYHVIYTFLNSAWQFNYVINHFIVK 549

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 169649031 153 YPLNYGQVII-KSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIY-LLLFVFWILILFNFYIF 217
Cdd:MTH00210 550 NIWKFGHLITyRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYaLIMIIFTTLFISGAGIE 616
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
 1-211 3.97e-09

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 55.94  E-value: 3.97e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00004 388 FYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLI 467

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPS-PYMICLPVYMKLLTLFVCIVGGALGY-LISVSNLYTLNKsflNYKISFFLGSMWFMPYISTYGLIFYPLNYG 158
Cdd:MTH00004 468 SSTILPTkTPPMTMPTTTKLAALIVTILGILLALeLSNMTTTLTPPK---QNTLHNFSNQLAFFNPLTHRLLPMTLLKSS 544

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 169649031 159 QVIIKSF-DQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILIL 211
Cdd:MTH00004 545 QKIATHLiDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLL 598
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
 1-211 2.75e-08

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 53.16  E-value: 2.75e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNC--GSLNMLNDEGWVMLRGMLGLLFMSIIGGS 78
Cdd:MTH00020 389 FYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLkkAVFFHLHEGDWNLLLPLGILALGSIFVGY 468

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  79 MLNWLI--FPSPYMICLPVYMKLLTLFVCIVGGALGYLISVSNLYTLNKSFLNY-KISF-FLGSMWFMPYISTYGLI--F 152
Cdd:MTH00020 469 LAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIgRNSYtFLGSAWQFNYILNYFLIkkI 548

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 169649031 153 YPLNYgQVIIKSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILIL 211
Cdd:MTH00020 549 WKGGH-LISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIF 606
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
 1-212 9.15e-06

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 45.61  E-value: 9.15e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00108 389 FYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLI 468

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPS--PYMIcLPVYMKLLTLFVCIvggaLGYLISVS-NLYTLNKSFLNYKISF-FLGSMWFMPYISTYGLIFYPLN 156
Cdd:MTH00108 469 SNNIPPTtiPQMT-MPLYLKLTALAVTI----LGFILALElNLLTNNLKFKYPSNTFkFSNMLGYFPTIMHRLPPYMNLT 543

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 169649031 157 YGQVIIKS-FDQGWSEYFGGQHIYQKLVKYSQVLFNmQNNSLKIYLLLFVFWILILF 212
Cdd:MTH00108 544 MSQKLASMlLDLIWLEKILPKTISLIQMKASTTISN-QKGLIKLYFLSFLITLTLSL 599
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-115 3.08e-05

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 43.99  E-value: 3.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFST-GLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSM 79
Cdd:COG1009  389 FFSKEAILEAALEAGGLGPLLLAVALLGaFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLL 468

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 169649031  80 LNWL---------IFPSPYMICLPVYMKLLTLFVCIVGGALGYLI 115
Cdd:COG1009  469 LPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
 1-115 1.35e-04

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 42.07  E-value: 1.35e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNiNLFSFFLYFFSTGLTVCYSFRLVFYTMSGDlncgslNMLNDE-----GWVMLRGMLGLLFMSII 75
Cdd:PRK06590 396 FFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLVFHGK------EKEKIHhphesPAVMTLPLIVLAVLSVF 468

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 169649031  76 GG-----SMLNWLIFPSPY-----MICLPVYMKLLTLFVCIVGGALGYLI 115
Cdd:PRK06590 469 AGalivpPFLGVLPLTTELahgeaEHHLPVWVALLPLVVALAGIALAWLL 518
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
 1-206 1.21e-03

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 39.43  E-value: 1.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031   1 FYSKDMILEIVMINNINLFSFFLYFFSTGLTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSML 80
Cdd:MTH00137 394 FFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLI 473

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  81 NWLIFPS--PYMiCLPVYMKLLTLFVCIVGgalgyLISVSNLYTL-NKSFlnyKIsfflgsmwfMPYISTYG----LIFY 153
Cdd:MTH00137 474 TSNILPLktPVM-TMPPLLKLAALIVTILG-----LLIALELASLtNKQF---KP---------TPTLPPHHfsnmLGFF 535

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169649031 154 P-----------LNYGQVII-KSFDQGWSEYFGGQHIYQKLVKYSQVLFNMQNNSLKIYLLLFVF 206
Cdd:MTH00137 536 PaiihrltpklnLTLGQTIAtQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTLFLL 600
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
 30-215 8.74e-03

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 36.86  E-value: 8.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  30 LTVCYSFRLVFYTMSGDLNCGSLNMLNDEGWVMLRGMLGLLFMSIIGGSMLNWLI-----------FPSPYMICLPVYMK 98
Cdd:MTH00032 471 LTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIqdiligdiehpIVPPLIKVMPTLMG 550

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169649031  99 LLTLFVCIVGGALGYLISVS-NLYTLNKSFLnYKISFFLGSMWFMPYISTYGLIFYPLNYGQV-IIKSFDQGWSEYFGGQ 176
Cdd:MTH00032 551 LFGMGLCLWAQKGTREGELYwGFDPIGPSFL-LSIYSFLGGAWQGDHLINKLVAIPLFSFGHWgIYKTLDRGWLELFGPQ 629

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 169649031 177 HIYQKLVKYSQVLFNMQNNSLKIYLLLFVFWILILFNFY 215
Cdd:MTH00032 630 GISTIALRVSQFISNLQSGVISRYALVLLSFTIIFLALW 668
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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