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Conserved domains on  [gi|169648642|gb|ACA62318|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Drosophila canalinea]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-72 4.95e-21

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 79.05  E-value: 4.95e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00161  42 DPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-72 4.95e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 79.05  E-value: 4.95e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00161  42 DPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
1-39 3.84e-09

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 48.19  E-value: 3.84e-09
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFK 39
Cdd:pfam00507 25 DPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR 63
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-39 3.37e-06

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 41.26  E-value: 3.37e-06
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFK 39
Cdd:COG0838   47 EPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFR 85
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-72 4.95e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 79.05  E-value: 4.95e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00161  42 DPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-73 5.07e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 69.12  E-value: 5.07e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNWS 73
Cdd:MTH00148  44 DPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-72 2.16e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 67.32  E-value: 2.16e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00202  44 DPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-73 1.68e-13

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 59.87  E-value: 1.68e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNWS 73
Cdd:MTH00012  44 DPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-72 5.05e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 58.78  E-value: 5.05e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00136  43 DPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEW 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-73 5.49e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 58.41  E-value: 5.49e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNWS 73
Cdd:MTH00106  42 DPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-72 1.23e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 55.00  E-value: 1.23e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPM---IIIFKYSNLMIWSFTAIIFILILLIglyHEWNQGMLNW 72
Cdd:MTH00069  41 DPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNTPTNTLFWSTLILILLTLGLI---YEWIQGGLEW 112
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-72 2.19e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 54.52  E-value: 2.19e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSftAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00203  43 DPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLL--AFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-72 3.36e-11

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 54.22  E-value: 3.36e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00042  43 DPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEW 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-72 8.57e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 52.96  E-value: 8.57e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00113  42 DPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
1-39 3.84e-09

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 48.19  E-value: 3.84e-09
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFK 39
Cdd:pfam00507 25 DPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR 63
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-72 2.25e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 44.32  E-value: 2.25e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWsFTAIIFILILLIGLYHEWNQGMLNW 72
Cdd:MTH00055  47 DPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGF-WVMYLFLIILTIGLIYEWVKGGLEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-39 3.37e-06

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 41.26  E-value: 3.37e-06
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFK 39
Cdd:COG0838   47 EPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFR 85
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 1-72 1.91e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 39.53  E-value: 1.91e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYhEWNQGMLNW 72
Cdd:MTH00030  52 DPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYTFLIVLAIGLAY-EWIKGGLEW 122
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-72 2.63e-05

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 38.89  E-value: 2.63e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNLMIWSFTAIIFILILLIGLYhEWNQGMLNW 72
Cdd:MTH00018  42 DPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWTMVGFLFILTLGLIY-EWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 1-73 1.38e-04

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 37.15  E-value: 1.38e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 169648642   1 DPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIFKYSNlMIWSFTAIIFILILLIGLYHEWNQGMLNWS 73
Cdd:PRK06602  50 EAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIG-WLGFVEAMIFILVLLVGLVYLWRKGALDWE 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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