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interferon a3-like isoform X1 [Salmo trutta]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
IFab super family | cl00092 | Interferon alpha, beta. Includes also interferon omega and tau. Different from interferon ... |
67-202 | 2.45e-14 | |||
Interferon alpha, beta. Includes also interferon omega and tau. Different from interferon gamma family. Type I interferons(alpha, beta) belong to the larger helical cytokine superfamily, which includes growth hormones, interleukins, several colony-stimulating factors and several other regulatory molecules. All function as regulators of cellular activty by interacting with cell-surface receptors and activating various signalling pathways. Interferons produce antiviral and antiproliferative responses in cells. Receptor specificity determines function of the various members of the family. The actual alignment was detected with superfamily member pfam00143: Pssm-ID: 469611 Cd Length: 160 Bit Score: 67.60 E-value: 2.45e-14
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Name | Accession | Description | Interval | E-value | |||
Interferon | pfam00143 | Interferon alpha/beta domain; Type I interferons (alpha, beta) belong to the larger helical ... |
67-202 | 2.45e-14 | |||
Interferon alpha/beta domain; Type I interferons (alpha, beta) belong to the larger helical cytokine superfamily,which includes growth hormones, interleukins, several colony-stimulating factors and several other regulatory molecules. Pssm-ID: 459689 Cd Length: 160 Bit Score: 67.60 E-value: 2.45e-14
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IFab | cd00095 | Interferon alpha, beta. Includes also interferon omega and tau. Different from interferon ... |
89-198 | 3.99e-08 | |||
Interferon alpha, beta. Includes also interferon omega and tau. Different from interferon gamma family. Type I interferons(alpha, beta) belong to the larger helical cytokine superfamily, which includes growth hormones, interleukins, several colony-stimulating factors and several other regulatory molecules. All function as regulators of cellular activty by interacting with cell-surface receptors and activating various signalling pathways. Interferons produce antiviral and antiproliferative responses in cells. Receptor specificity determines function of the various members of the family. Pssm-ID: 238047 Cd Length: 152 Bit Score: 50.80 E-value: 3.99e-08
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IFabd | smart00076 | Interferon alpha, beta and delta; Interferons produce antiviral and antiproliferative ... |
93-198 | 7.34e-06 | |||
Interferon alpha, beta and delta; Interferons produce antiviral and antiproliferative responses in cells. They are classified into five groups, all of them related but gamma-interferon. Pssm-ID: 197503 Cd Length: 117 Bit Score: 43.45 E-value: 7.34e-06
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Name | Accession | Description | Interval | E-value | |||
Interferon | pfam00143 | Interferon alpha/beta domain; Type I interferons (alpha, beta) belong to the larger helical ... |
67-202 | 2.45e-14 | |||
Interferon alpha/beta domain; Type I interferons (alpha, beta) belong to the larger helical cytokine superfamily,which includes growth hormones, interleukins, several colony-stimulating factors and several other regulatory molecules. Pssm-ID: 459689 Cd Length: 160 Bit Score: 67.60 E-value: 2.45e-14
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IFab | cd00095 | Interferon alpha, beta. Includes also interferon omega and tau. Different from interferon ... |
89-198 | 3.99e-08 | |||
Interferon alpha, beta. Includes also interferon omega and tau. Different from interferon gamma family. Type I interferons(alpha, beta) belong to the larger helical cytokine superfamily, which includes growth hormones, interleukins, several colony-stimulating factors and several other regulatory molecules. All function as regulators of cellular activty by interacting with cell-surface receptors and activating various signalling pathways. Interferons produce antiviral and antiproliferative responses in cells. Receptor specificity determines function of the various members of the family. Pssm-ID: 238047 Cd Length: 152 Bit Score: 50.80 E-value: 3.99e-08
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IFabd | smart00076 | Interferon alpha, beta and delta; Interferons produce antiviral and antiproliferative ... |
93-198 | 7.34e-06 | |||
Interferon alpha, beta and delta; Interferons produce antiviral and antiproliferative responses in cells. They are classified into five groups, all of them related but gamma-interferon. Pssm-ID: 197503 Cd Length: 117 Bit Score: 43.45 E-value: 7.34e-06
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Blast search parameters | ||||
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