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Conserved domains on  [gi|16950607|ref|NP_057581|]
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large ribosomal subunit protein mL51 [Homo sapiens]

Protein Classification

MRP-L51 domain-containing protein( domain architecture ID 10563004)

MRP-L51 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MRP-L51 pfam10244
Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S ...
 38-126 2.40e-48

Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S mitochondrial ribosome. It has otherwise been referred to as bMRP-64. The exact function of this family is not known.


:

Pssm-ID: 463021  Cd Length: 93  Bit Score: 149.73  E-value: 2.40e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16950607    38 LPPPKVVDRWNEKRAMFGVYDNIGILGNFEKHPKEL-IRGPIWLRGWKGNELQRCIRKRKMVG---SRMFADDLHNLNKR 113
Cdd:pfam10244   1 MPKYKPKDRWTEKRALFGQNDYIDILGDGKLHPKDLlYNVPSWLRGVKGNELQRLLRKRKMVGetyPRMRPTKWHNLNKR 80

                          90
                  ....*....|...
gi 16950607   114 IRYLYKHFNRHGK 126
Cdd:pfam10244  81 IRYLYKRLNRKTK 93
 
Name Accession Description Interval E-value
MRP-L51 pfam10244
Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S ...
 38-126 2.40e-48

Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S mitochondrial ribosome. It has otherwise been referred to as bMRP-64. The exact function of this family is not known.


Pssm-ID: 463021  Cd Length: 93  Bit Score: 149.73  E-value: 2.40e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16950607    38 LPPPKVVDRWNEKRAMFGVYDNIGILGNFEKHPKEL-IRGPIWLRGWKGNELQRCIRKRKMVG---SRMFADDLHNLNKR 113
Cdd:pfam10244   1 MPKYKPKDRWTEKRALFGQNDYIDILGDGKLHPKDLlYNVPSWLRGVKGNELQRLLRKRKMVGetyPRMRPTKWHNLNKR 80

                          90
                  ....*....|...
gi 16950607   114 IRYLYKHFNRHGK 126
Cdd:pfam10244  81 IRYLYKRLNRKTK 93
 
Name Accession Description Interval E-value
MRP-L51 pfam10244
Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S ...
 38-126 2.40e-48

Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S mitochondrial ribosome. It has otherwise been referred to as bMRP-64. The exact function of this family is not known.


Pssm-ID: 463021  Cd Length: 93  Bit Score: 149.73  E-value: 2.40e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16950607    38 LPPPKVVDRWNEKRAMFGVYDNIGILGNFEKHPKEL-IRGPIWLRGWKGNELQRCIRKRKMVG---SRMFADDLHNLNKR 113
Cdd:pfam10244   1 MPKYKPKDRWTEKRALFGQNDYIDILGDGKLHPKDLlYNVPSWLRGVKGNELQRLLRKRKMVGetyPRMRPTKWHNLNKR 80

                          90
                  ....*....|...
gi 16950607   114 IRYLYKHFNRHGK 126
Cdd:pfam10244  81 IRYLYKRLNRKTK 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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