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Conserved domains on  [gi|1685619725|ref|XP_029354983|]
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high choriolytic enzyme 1-like [Echeneis naucrates]

Protein Classification

zinc metalloprotease; M10 family metallopeptidase domain-containing protein( domain architecture ID 10136819)

zinc metalloprotease may be a member of the astacin-like protease family or the adamalysin/reprolysin-like protease family; M10 family metallopeptidase domain-containing protein is a metalloendopeptidase similar to matrix metalloproteinases that may be endopeptidases that degrade various components of the extracellular matrix

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ZnMc_hatching_enzyme cd04283
Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted ...
79-261 8.20e-125

Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted by teleost embryos to digest the egg envelope or chorion. In some teleosts, the hatching enzyme may be a system consisting of two evolutionary related metalloproteases, high choriolytic enzyme and low choriolytic enzyme (HCE and LCE), which may have different substrate specificities and cooperatively digest the chorion.


:

Pssm-ID: 239810 [Multi-domain]  Cd Length: 182  Bit Score: 352.34  E-value: 8.20e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  79 NGMVTIPYVMSSQFSRGESQKIERAMKSFHSRTCIRFVPYSNQRDYISVENKGGCFSALGRQGGRQVLSLNKQGCIYHGI 158
Cdd:cd04283     1 NGIVYVPYVISPQYSENERAVIEKAMQEFETLTCVRFVPRTTERDYLNIESRSGCWSYIGRQGGRQTVSLQKQGCMYKGI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 159 VQHEFNHALGFQHEQTRSDRDSYVRINWENIEPSMAYNFQKANTNNLNTPYDYSSIMHYGRTAFSIAyGKETITPIPNPN 238
Cdd:cd04283    81 IQHELLHALGFYHEQTRSDRDKYVRINWENIIPDQLYNFDKQDTNNLGTPYDYSSVMHYGRYAFSIN-GKPTIVPIPDPN 159
                         170       180
                  ....*....|....*....|...
gi 1685619725 239 VQIGQRQGMSRWDITRINKLYGC 261
Cdd:cd04283   160 VPIGQRQGMSNLDILRINKLYNC 182
 
Name Accession Description Interval E-value
ZnMc_hatching_enzyme cd04283
Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted ...
79-261 8.20e-125

Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted by teleost embryos to digest the egg envelope or chorion. In some teleosts, the hatching enzyme may be a system consisting of two evolutionary related metalloproteases, high choriolytic enzyme and low choriolytic enzyme (HCE and LCE), which may have different substrate specificities and cooperatively digest the chorion.


Pssm-ID: 239810 [Multi-domain]  Cd Length: 182  Bit Score: 352.34  E-value: 8.20e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  79 NGMVTIPYVMSSQFSRGESQKIERAMKSFHSRTCIRFVPYSNQRDYISVENKGGCFSALGRQGGRQVLSLNKQGCIYHGI 158
Cdd:cd04283     1 NGIVYVPYVISPQYSENERAVIEKAMQEFETLTCVRFVPRTTERDYLNIESRSGCWSYIGRQGGRQTVSLQKQGCMYKGI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 159 VQHEFNHALGFQHEQTRSDRDSYVRINWENIEPSMAYNFQKANTNNLNTPYDYSSIMHYGRTAFSIAyGKETITPIPNPN 238
Cdd:cd04283    81 IQHELLHALGFYHEQTRSDRDKYVRINWENIIPDQLYNFDKQDTNNLGTPYDYSSVMHYGRYAFSIN-GKPTIVPIPDPN 159
                         170       180
                  ....*....|....*....|...
gi 1685619725 239 VQIGQRQGMSRWDITRINKLYGC 261
Cdd:cd04283   160 VPIGQRQGMSNLDILRINKLYNC 182
Astacin pfam01400
Astacin (Peptidase family M12A); The members of this family are enzymes that cleave peptides. ...
83-261 7.95e-73

Astacin (Peptidase family M12A); The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Members of this family contain two conserved disulphide bridges, these are joined 1-4 and 2-3. Members of this family have an amino terminal propeptide which is cleaved to give the active protease domain. All other linked domains are found to the carboxyl terminus of this domain. This family includes: Astacin, a digestive enzyme from Crayfish. Meprin, a multiple domain membrane component that is constructed from a homologous alpha and beta chain. Proteins involved in morphogenesis such as Swiss:P13497, and Tolloid from drosophila.


Pssm-ID: 426242 [Multi-domain]  Cd Length: 192  Bit Score: 221.00  E-value: 7.95e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  83 TIPYVMSSQFSRGESQKIERAMKSFHSRTCIRFVPY--SNQRDYISVENKGGCFSALGRQGGRQVLSLNKqGCIYHGIVQ 160
Cdd:pfam01400   7 PIPYVIDGSLTGLARALIRQAMRHWENKTCIRFVERtpAPDNNYLFFFKGDGCYSYVGRVGGRQPVSIGD-GCDKFGIIV 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 161 HEFNHALGFQHEQTRSDRDSYVRINWENIEPSMAYNFQK---ANTNNLNTPYDYSSIMHYGRTAFSIAYGKETITPIPNP 237
Cdd:pfam01400  86 HELGHALGFFHEQSRPDRDDYVSINWDNIDPGQEGNFDKydpSEVDSYGVPYDYGSIMHYGPNAFSKNGSLPTIVPKDND 165
                         170       180
                  ....*....|....*....|....*
gi 1685619725 238 NVQ-IGQRQGMSRWDITRINKLYGC 261
Cdd:pfam01400 166 YQAtIGQRVKLSFYDIKKINKLYKC 190
ZnMc smart00235
Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a ...
71-213 4.50e-42

Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site.


Pssm-ID: 214576 [Multi-domain]  Cd Length: 139  Bit Score: 140.56  E-value: 4.50e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725   71 SCLWKKGsngmvTIPYV-MSSQFSRGESQKIERAMKSFHSRTCIRFVP-YSNQRDYISVENK-GGCFSA-LGRQGGRQVL 146
Cdd:smart00235   2 SKKWPKG-----TVPYViDSSSLSPEEREAIAKALAEWSDVTCIRFVErTGTADIYISFGSGdSGCTLShAGRPGGDQHL 76
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1685619725  147 SLNkQGCIYHGIVQHEFNHALGFQHEQTRSDRDSYVRINWENIepsMAYNFQKANTNNLNTPYDYSS 213
Cdd:smart00235  77 SLG-NGCINTGVAAHELGHALGLYHEQSRSDRDNYMYINYTNI---DTRNFDLSEDDSLGIPYDYGS 139
 
Name Accession Description Interval E-value
ZnMc_hatching_enzyme cd04283
Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted ...
79-261 8.20e-125

Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted by teleost embryos to digest the egg envelope or chorion. In some teleosts, the hatching enzyme may be a system consisting of two evolutionary related metalloproteases, high choriolytic enzyme and low choriolytic enzyme (HCE and LCE), which may have different substrate specificities and cooperatively digest the chorion.


Pssm-ID: 239810 [Multi-domain]  Cd Length: 182  Bit Score: 352.34  E-value: 8.20e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  79 NGMVTIPYVMSSQFSRGESQKIERAMKSFHSRTCIRFVPYSNQRDYISVENKGGCFSALGRQGGRQVLSLNKQGCIYHGI 158
Cdd:cd04283     1 NGIVYVPYVISPQYSENERAVIEKAMQEFETLTCVRFVPRTTERDYLNIESRSGCWSYIGRQGGRQTVSLQKQGCMYKGI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 159 VQHEFNHALGFQHEQTRSDRDSYVRINWENIEPSMAYNFQKANTNNLNTPYDYSSIMHYGRTAFSIAyGKETITPIPNPN 238
Cdd:cd04283    81 IQHELLHALGFYHEQTRSDRDKYVRINWENIIPDQLYNFDKQDTNNLGTPYDYSSVMHYGRYAFSIN-GKPTIVPIPDPN 159
                         170       180
                  ....*....|....*....|...
gi 1685619725 239 VQIGQRQGMSRWDITRINKLYGC 261
Cdd:cd04283   160 VPIGQRQGMSNLDILRINKLYNC 182
ZnMc_astacin_like cd04280
Zinc-dependent metalloprotease, astacin_like subfamily or peptidase family M12A, a group of ...
83-259 1.97e-89

Zinc-dependent metalloprotease, astacin_like subfamily or peptidase family M12A, a group of zinc-dependent proteolytic enzymes with a HExxH zinc-binding site/active site. Members of this family may have an amino terminal propeptide, which is cleaved to yield the active protease domain, which is consequently always found at the N-terminus in multi-domain architectures. This family includes: astacin, a digestive enzyme from Crayfish; meprin, a multiple domain membrane component that is constructed from a homologous alpha and beta chain, proteins involved in (bone) morphogenesis, tolloid from drosophila, and the sea urchin SPAN protein, which may also play a role in development.


Pssm-ID: 239807 [Multi-domain]  Cd Length: 180  Bit Score: 262.51  E-value: 1.97e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  83 TIPYVMSSQFSRGESQKIERAMKSFHSRTCIRFVPYSNQRDYISVENKGGCFSALGRQGGRQVLSLNKqGCIYHGIVQHE 162
Cdd:cd04280     3 TVPYVIDGSFDESDRSLILRAMREIESNTCIRFVPRTTEKDYIRIVKGSGCWSYVGRVGGRQVVSLGS-GCFSLGTIVHE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 163 FNHALGFQHEQTRSDRDSYVRINWENIEPSMAYNFQKAN---TNNLNTPYDYSSIMHYGRTAFSIAyGKETITPIPNPNV 239
Cdd:cd04280    82 LMHALGFYHEQSRPDRDDYVTINWENIQPGYEHNFDKYSpdtVTTYGVPYDYGSVMHYGPTAFSKN-GKPTIVPKDPGYQ 160
                         170       180
                  ....*....|....*....|
gi 1685619725 240 QIGQRQGMSRWDITRINKLY 259
Cdd:cd04280   161 IIGQREGLSFLDIKKINKMY 180
Astacin pfam01400
Astacin (Peptidase family M12A); The members of this family are enzymes that cleave peptides. ...
83-261 7.95e-73

Astacin (Peptidase family M12A); The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Members of this family contain two conserved disulphide bridges, these are joined 1-4 and 2-3. Members of this family have an amino terminal propeptide which is cleaved to give the active protease domain. All other linked domains are found to the carboxyl terminus of this domain. This family includes: Astacin, a digestive enzyme from Crayfish. Meprin, a multiple domain membrane component that is constructed from a homologous alpha and beta chain. Proteins involved in morphogenesis such as Swiss:P13497, and Tolloid from drosophila.


Pssm-ID: 426242 [Multi-domain]  Cd Length: 192  Bit Score: 221.00  E-value: 7.95e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  83 TIPYVMSSQFSRGESQKIERAMKSFHSRTCIRFVPY--SNQRDYISVENKGGCFSALGRQGGRQVLSLNKqGCIYHGIVQ 160
Cdd:pfam01400   7 PIPYVIDGSLTGLARALIRQAMRHWENKTCIRFVERtpAPDNNYLFFFKGDGCYSYVGRVGGRQPVSIGD-GCDKFGIIV 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 161 HEFNHALGFQHEQTRSDRDSYVRINWENIEPSMAYNFQK---ANTNNLNTPYDYSSIMHYGRTAFSIAYGKETITPIPNP 237
Cdd:pfam01400  86 HELGHALGFFHEQSRPDRDDYVSINWDNIDPGQEGNFDKydpSEVDSYGVPYDYGSIMHYGPNAFSKNGSLPTIVPKDND 165
                         170       180
                  ....*....|....*....|....*
gi 1685619725 238 NVQ-IGQRQGMSRWDITRINKLYGC 261
Cdd:pfam01400 166 YQAtIGQRVKLSFYDIKKINKLYKC 190
ZnMc_meprin cd04282
Zinc-dependent metalloprotease, meprin_like subfamily. Meprins are membrane-bound or secreted ...
35-261 2.77e-53

Zinc-dependent metalloprotease, meprin_like subfamily. Meprins are membrane-bound or secreted extracellular proteases, which cleave a variety of targets, including peptides such as parathyroid hormone, gastrin, and cholecystokinin, cytokines such as osteopontin, and proteins such as collagen IV, fibronectin, casein and gelatin. Meprins may also be able to release proteins from the cell surface. Closely related meprin alpha- and beta-subunits form homo- and hetero-oligomers; these complexes are found on epithelial cells of the intestine, for example, and are also expressed in certain cancer cells.


Pssm-ID: 239809 [Multi-domain]  Cd Length: 230  Bit Score: 172.27  E-value: 2.77e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  35 DISTRILTTNNATDEFLVEGDLLAPTNRNAMTCWSQSCLWKkgsngmVTIPYVMSSQFSRGESQKIERAMKSFHSRTCIR 114
Cdd:cd04282     7 GIDQDIFEINLGAGLDLFEGDILLDEGQSRNGLIGDTYRWP------FPIPYILDDSLDLNAKGVILKAFEMYRLKSCVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 115 FVPYSNQRDYISVENKGGCFSALGRQGGRQVLSLNkQGCIYHGIVQHEFNHALGFQHEQTRSDRDSYVRINWENIEPSMA 194
Cdd:cd04282    81 FKPYEGESNYIFFFKGSGCWSMVGDQQGGQNLSIG-AGCDYKATVEHEFLHALGFYHEQSRSDRDDYVKIWWDQILSGRE 159
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1685619725 195 YNFQKAN---TNNLNTPYDYSSIMHYGRTAFSIAYGKETI-TPIPNPNVQIGQRQGMSRWDITRINKLYGC 261
Cdd:cd04282   160 HNFNKYDdsfSTDLNTPYDYESVMHYSPFSFNKGASEPTItTKIPEFNDIIGQRLDFSDIDLERLNRMYNC 230
ZnMc_BMP1_TLD cd04281
Zinc-dependent metalloprotease; BMP1/TLD-like subfamily. BMP1 (Bone morphogenetic protein 1) ...
73-261 7.95e-53

Zinc-dependent metalloprotease; BMP1/TLD-like subfamily. BMP1 (Bone morphogenetic protein 1) and TLD (tolloid)-like metalloproteases play vital roles in extracellular matrix formation, by cleaving precursor proteins such as enzymes, structural proteins, and proteins involved in the mineralization of the extracellular matrix. The drosophila protein tolloid and its Xenopus homologue xolloid cleave and inactivate Sog and chordin, respectively, which are inhibitors of Dpp (the Drosophila decapentaplegic gene product) and its homologue BMP4, involved in dorso-ventral patterning.


Pssm-ID: 239808 [Multi-domain]  Cd Length: 200  Bit Score: 170.31  E-value: 7.95e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  73 LWKKGsngmvTIPYVMSSQFSRGESQKIERAMKSFHSRTCIRFVPYSNQRDYISVENKG-GCFSALGRQG-GRQVLSLNK 150
Cdd:cd04281     9 IWPGG-----VIPYVIDGNFTGSQRAMFKQAMRHWENFTCVTFVERTPEENYIVFTYRPcGCCSYVGRRGnGPQAISIGK 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 151 QgCIYHGIVQHEFNHALGFQHEQTRSDRDSYVRINWENIEPSMAYNFQK---ANTNNLNTPYDYSSIMHYGRTAFSIAYG 227
Cdd:cd04281    84 N-CDKFGIVVHELGHVIGFWHEHTRPDRDDHVTIIRENIQPGQEYNFLKmepEEVDSLGEPYDFDSIMHYARNTFSRGMF 162
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1685619725 228 KETITPIPNPN---VQIGQRQGMSRWDITRINKLYGC 261
Cdd:cd04281   163 LDTILPKRDPNgvrPEIGQRTRLSEGDIIQANKLYKC 199
ZnMc smart00235
Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a ...
71-213 4.50e-42

Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site.


Pssm-ID: 214576 [Multi-domain]  Cd Length: 139  Bit Score: 140.56  E-value: 4.50e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725   71 SCLWKKGsngmvTIPYV-MSSQFSRGESQKIERAMKSFHSRTCIRFVP-YSNQRDYISVENK-GGCFSA-LGRQGGRQVL 146
Cdd:smart00235   2 SKKWPKG-----TVPYViDSSSLSPEEREAIAKALAEWSDVTCIRFVErTGTADIYISFGSGdSGCTLShAGRPGGDQHL 76
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1685619725  147 SLNkQGCIYHGIVQHEFNHALGFQHEQTRSDRDSYVRINWENIepsMAYNFQKANTNNLNTPYDYSS 213
Cdd:smart00235  77 SLG-NGCINTGVAAHELGHALGLYHEQSRSDRDNYMYINYTNI---DTRNFDLSEDDSLGIPYDYGS 139
ZnMc cd00203
Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major ...
86-259 7.63e-22

Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which are involved in vertebrate development and disease.


Pssm-ID: 238124 [Multi-domain]  Cd Length: 167  Bit Score: 89.12  E-value: 7.63e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  86 YVMSSQFSRGESQKIERAMKSFHSRTCIRFVPY--SNQRDYISVENKG-------GCFSALGR--QGGRQVLSLNKQGCI 154
Cdd:cd00203    13 DVEEENLSAQIQSLILIAMQIWRDYLNIRFVLVgvEIDKADIAILVTRqdfdggtGGWAYLGRvcDSLRGVGVLQDNQSG 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 155 ---YHGIVQHEFNHALGFQHEQTRSDRDSYVRInweniepsmaynfqkaNTNNLNTPYDYSSIMHYGRTAFSiaygketi 231
Cdd:cd00203    93 tkeGAQTIAHELGHALGFYHDHDRKDRDDYPTI----------------DDTLNAEDDDYYSVMSYTKGSFS-------- 148
                         170       180
                  ....*....|....*....|....*...
gi 1685619725 232 tpipnpnvqIGQRQGMSRWDITRINKLY 259
Cdd:cd00203   149 ---------DGQRKDFSQCDIDQINKLY 167
ZnMc_MMP_like cd04268
Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix ...
83-259 1.92e-16

Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix metalloproteinases (MMPs), serralysins, and the astacin_like family of proteases.


Pssm-ID: 239796 [Multi-domain]  Cd Length: 165  Bit Score: 74.46  E-value: 1.92e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725  83 TIPYVMSSQFSRGESQKIERAMKSFHSRTCIRFVP---YSNQRDYISVENKGGCFSALGRQGGRQVLSLNKQ-------- 151
Cdd:cd04268     3 PITYYIDDSVPDKLRAAILDAIEAWNKAFAIGFKNandVDPADIRYSVIRWIPYNDGTWSYGPSQVDPLTGEillarvyl 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1685619725 152 --------GCIYHGIVQHEFNHALGFQHEQTRSDRDSYVrinweniepsmaynfqkantNNLNTPYDYSSIMHYGRTAFS 223
Cdd:cd04268    83 yssfveysGARLRNTAEHELGHALGLRHNFAASDRDDNV--------------------DLLAEKGDTSSVMDYAPSNFS 142
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1685619725 224 IaygketitpipnpNVQIGQRQGMSRWDITRINKLY 259
Cdd:cd04268   143 I-------------QLGDGQKYTIGPYDIAAIKKLY 165
ZnMc_MMP_like_3 cd04327
Zinc-dependent metalloprotease; MMP_like sub-family 3. A group of bacterial and fungal ...
158-217 4.22e-07

Zinc-dependent metalloprotease; MMP_like sub-family 3. A group of bacterial and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.


Pssm-ID: 239819 [Multi-domain]  Cd Length: 198  Bit Score: 49.30  E-value: 4.22e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1685619725 158 IVQHEFNHALGFQHEQTRSDRDsyvrINWeNIEPSMAY------NFQKANTN-----------NLNTPYDYSSIMHY 217
Cdd:cd04327    95 VVLHEFGHALGFIHEHQSPAAN----IPW-DKEAVYAYfsgppnWDRETVINhnvfaklddgdVAYSPYDPDSIMHY 166
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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