|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
1.16e-130 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 384.12 E-value: 1.16e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 1 MLIFLLGMLFMIPLVLL-SSWWFMQLWLFILSLLFIVIGHFSFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSSLSIK 79
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLkNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 80 FMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILW 159
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 160 LEHCLGGLCYLLMFDYCN-NIYLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIIF 238
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSlNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 239 FSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNI 318
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 319 VYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMYS 398
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1681062985 399 SSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFLSCDYYL 441
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
41-439 |
5.06e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 322.94 E-value: 5.06e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 41 SFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSSLSIKFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLI 120
Cdd:MTH00150 10 FSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 121 PTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILWLEHCLG----GLCYLLMFDYCNNIYLYLSMIFAFLLKLPLY 196
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGssfmLLISSLRKLLSSMGLWGLLVFLAFLVKLPMY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 197 MFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSS 276
Cdd:MTH00150 170 PFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 277 VSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSP 356
Cdd:MTH00150 250 VGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 357 FTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFLS 436
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILK 409
|
...
gi 1681062985 437 CDY 439
Cdd:MTH00150 410 SDL 412
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
2-438 |
4.40e-96 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 295.88 E-value: 4.40e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 2 LIFLLGMLFMIPLVLLSSWWF--MQLWLFILSLLFIVIGHFSFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSSLSIK 79
Cdd:MTH00014 4 LIMPLISLLLLPLIKYPWSWAltFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 80 FMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILW 159
Cdd:MTH00014 84 QNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 160 LEHCLGGLCYLLMFDYCNNIYLY----LSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKF 235
Cdd:MTH00014 164 IFYTNNSLSMLMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 236 IIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCL 315
Cdd:MTH00014 244 FMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFAL 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 316 TNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLY 395
Cdd:MTH00014 324 ANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLF 403
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1681062985 396 MYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFLSCD 438
Cdd:MTH00014 404 LYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
1.30e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 294.58 E-value: 1.30e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 1 MLIFLLGMLFMIPLVLLS-SWWFMQLWLFILSLLFIV-IGHFSFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSSLSI 78
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFkDWSFFSNLLLIGLFFSSFfFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 79 KFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSIL 158
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 159 WLEHCLGGLCYLLMFDYCNNIY----LYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFK 234
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFylflYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 235 FIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFC 314
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 315 LTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSL 394
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1681062985 395 YMYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFLS 436
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILK 442
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
10-436 |
1.09e-90 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 282.25 E-value: 1.09e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 10 FMIPLVLLSSWWFMQLWLFILSLLFIVIGHFSFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSSlsIKFMNYFSGL-- 87
Cdd:MTH00044 16 WIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLAS--INHLSNNSPNnq 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 88 --YMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLL----GSLPLLSSILWLE 161
Cdd:MTH00044 94 rtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFgslpLLISLIAIYSSSS 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 162 HCLGGLCYLLMFDYCNNIYLYLSMIF---AFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFK-FII 237
Cdd:MTH00044 174 SLSIPLSELNWLTSLSSNSSSIWWIFcilAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINlFSL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 238 FFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTN 317
Cdd:MTH00044 254 PSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLAN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 318 IVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMY 397
Cdd:MTH00044 334 ILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIY 413
|
410 420 430
....*....|....*....|....*....|....*....
gi 1681062985 398 SSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFLS 436
Cdd:MTH00044 414 QLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIIN 452
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-430 |
6.88e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 277.46 E-value: 6.88e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 1 MLIFLLGMLFMIPLVLLSSWWFMQLWLFILSLLFIVIG-----HFSFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSS 75
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSlqwlkPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 76 LSIKFMNYFSGLYMFMVLLLIFSLFC--TFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPL 153
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLilAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 154 LSSILWLEHCLGGLCYLLMF-------DYCNNIYLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGG 226
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQlthptltNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 227 YGLIRVFKFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHG 306
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 307 LCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLS 386
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1681062985 387 FFSCVYSLYMYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPL 430
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPL 444
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
2.28e-87 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 273.72 E-value: 2.28e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 1 MLIFLLGMLFMIPLVLLSS----WWFM---QLWLFILSLLFIVIGHFSFFFSNLGFGLgvDFLSWLMILLSFWICALMML 73
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPkkwlWTLTttnSLIIAFLSLMWFNLPSETMNFTNKYFGI--DQISSPLLILTCWLLPLMIL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 74 SSLSIKFMN--YFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSL 151
Cdd:MTH00068 79 ASQNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 152 PLLSSILWLEHCLGGLCYLLM--------FDYCNNIyLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLK 223
Cdd:MTH00068 159 PLLIALLILQNSLGSLSLILLelmspmqlMTYTNKI-WWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLK 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 224 LGGYGLIRVFKFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLML 303
Cdd:MTH00068 238 LGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 304 GHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLF 383
Cdd:MTH00068 318 SHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITG 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1681062985 384 LLSFFSCVYSLYMYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFL 435
Cdd:MTH00068 398 LGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLIL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
7.23e-83 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 261.80 E-value: 7.23e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 1 MLIFLLGMLFMIPLVLLSSWWFMQLWLFILSLLFIVIGHF---SFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSSLS 77
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKwssEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 78 IKFMNYFS--GLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLS 155
Cdd:MTH00206 82 HMKNEPINrqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 156 SILWLEHCLGGLCYLLMFDYC----NNIYLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIR 231
Cdd:MTH00206 162 ALLFLQNSLGSLSLYILYFSKlttwNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 232 VFKFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSG 311
Cdd:MTH00206 242 IILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 312 LFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCV 391
Cdd:MTH00206 322 LFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1681062985 392 YSLYMYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFLS 436
Cdd:MTH00206 402 YSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILN 446
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
7.02e-82 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 259.44 E-value: 7.02e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 1 MLIFLLGMLFMIPLVLLSS----WWFMQLWLFILSLL-FIVIGHFSFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSS 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKnnmiWINTTTYSLLISLIsLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 76 LS--IKFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPL 153
Cdd:MTH00110 81 QHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 154 LSSILWLEHCLGGLCYLLMFDYCN-------NIYLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGG 226
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQplpnswsNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 227 YGLIRVFKFI--IFFSLDYNFyvIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLG 304
Cdd:MTH00110 241 YGMMRITIILnpLTEFMAYPF--LMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 305 HGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFL 384
Cdd:MTH00110 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGL 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1681062985 385 LSFFSCVYSLYMYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFLS 436
Cdd:MTH00110 399 NMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLN 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
3-435 |
2.11e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 227.15 E-value: 2.11e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 3 IFLLGMLFMIPLVLLSSWWFMQLWLFILSLLFIVIGHFSFFFSNLGFGLGVDFLSWLMILLSFWICALMMLSSLSIKFMN 82
Cdd:MTH00127 9 LMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 83 YFSGLYMFMVLL--LIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILWL 160
Cdd:MTH00127 89 PINRQRMYITLLtsLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 161 EHCLGGLCYL-------LMFDYCNNIYLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVF 233
Cdd:MTH00127 169 QNSTGTLSMLtlqysqpLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMM 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 234 KFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLF 313
Cdd:MTH00127 249 VMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALF 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 314 CLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYS 393
Cdd:MTH00127 329 CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYS 408
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1681062985 394 LYMYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWFPLNFLFL 435
Cdd:MTH00127 409 LYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLIL 450
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
46-397 |
3.11e-62 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 209.17 E-value: 3.11e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 46 NLGFGLGVDFLSWLMILLSFWICALMMLSSLsiKFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLML 125
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASW--NEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 126 ILGWGYqPERISASLYLILYTLLGSLPLLSSILWlehcLGGLCYLLMFDYCN----------NIYLYLSMIFAFLLKLPL 195
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILA----LYFLAGALTFDIAElaaaplpltaQLLLFLAFFIAFAVKVPM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 196 YMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRvfkFIIFF----SLDYNFYVIIYSLYGGVMVSLICLYQVDLKML 271
Cdd:COG1008 226 FPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLR---FALPLfpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 272 IAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVS 351
Cdd:COG1008 303 IAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALA 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1681062985 352 NMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMY 397
Cdd:COG1008 383 SLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
46-397 |
8.71e-53 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 184.25 E-value: 8.71e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 46 NLGFGLGVDFLSWLMILLSfwiCALMMLSSL-SIKFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLM 124
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLT---ALLTPLAVLaSWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 125 LILGWGYqPERISASLYLILYTLlgslpllssilwlehcLGGLCYLL----MFDYCNN--------------------IY 180
Cdd:PRK05846 150 LIGVWGG-KNRIYAATKFFLYTL----------------LGSLLMLVaiiyLVVVYYNatgtfdiadllnlplppgvqYW 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 181 LYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRvFKFIIF--FSLDYNFYVIIYSLYGGVMV 258
Cdd:PRK05846 213 LFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLR-FSLPLFpdASHEFAPIIITLGVIAIIYG 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 259 SLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFM 338
Cdd:PRK05846 292 ALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVM 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1681062985 339 PSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMY 397
Cdd:PRK05846 372 PVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
9-397 |
1.93e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 182.96 E-value: 1.93e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 9 LFMIPLVLLSSWWFMQLWLFILSLLFIVIGHFSFFFSNLGFGlgVDFLSWLMILLSFWICALMMLssLSIKFMNYFSGLY 88
Cdd:MTH00204 39 ILFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFA--VDGVSLFFILLTTLLIPICIL--ISWKSIKFLFKEF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 89 MFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILWLEHCLGGLC 168
Cdd:MTH00204 115 LLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTD 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 169 YLLM----FDYCNNIYLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRvFKFIIF--FSLD 242
Cdd:MTH00204 195 YQILlnikLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLR-FSWPLFpaASEY 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 243 YNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYER 322
Cdd:MTH00204 274 FAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYER 353
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1681062985 323 FGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMY 397
Cdd:MTH00204 354 HHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
46-397 |
1.28e-51 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 180.91 E-value: 1.28e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 46 NLGFGLGVDFLSWLMILLSFWICALMMLSSLsiKFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLML 125
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 126 ILGWGyQPERISASLYLILYTLLGSLPLLSSILWLeHCLGGLCYLLMFDYCNNIY------LYLSMIFAFLLKLPLYMFH 199
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGL-YFLGGGTFDLLELLNLPLPfgvqtwLFLAFFIAFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 200 LWLPSAHVEAPISGSMILAGVLLKLGGYGLIRvFKFIIF--FSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSV 277
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLR-FNLPLFpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 278 SHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPF 357
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1681062985 358 TLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMY 397
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
51-397 |
3.11e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 171.77 E-value: 3.11e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 51 LGVDFLS-WLMILLSFWICALMMLSSLSIKFMnyfSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGW 129
Cdd:MTH00217 76 FAVDGISiFFLILTALLTPICILISWNSIKFL---IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 130 GYQPERISASLYLILYTLLGSLPLLSSILWLEHCLGGLCYL----LMFDYCNNIYLYLSMIFAFLLKLPLYMFHLWLPSA 205
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQalccLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 206 HVEAPISGSMILAGVLLKLGGYGLIRvFKFIIFFSLDYNF--YVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLV 283
Cdd:MTH00217 233 HVEAPVAGSVILAGVLLKLGGYGFIR-FSWPLLPEASEYFspLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLV 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 284 IAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIG 363
Cdd:MTH00217 312 TLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVG 391
|
330 340 350
....*....|....*....|....*....|....
gi 1681062985 364 EVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMY 397
Cdd:MTH00217 392 EFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-386 |
7.62e-44 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 155.16 E-value: 7.62e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 105 SLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILWLEHCLG-------GLCYLLMFDYCN 177
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 178 NIYLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIIFFSLDYNFYVIIYSLYGGVM 257
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 258 VSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCL-TNIVYERFGSRLFMLNSGLMS 336
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCaGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1681062985 337 FMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLS 386
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
29-434 |
1.70e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 154.29 E-value: 1.70e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 29 ILSLLFIVIGHFSFFFSNLGFGLGVDFLSWLMILLSFwicalMMLSSLSIKFMNYFSGLYMFMVLLLIFSLFCTFSSLNL 108
Cdd:MTH00094 10 FLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIF-----MMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSNM 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 109 FNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILWLEHCLGglcyLLMFDYCNNIYLYLSMIFA 188
Cdd:MTH00094 85 LMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFS----LCYFDFFLSWEMFFILSLS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 189 FLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIIFFsldYNFYVIIYSLYGGVMVSLICLYQVDL 268
Cdd:MTH00094 161 FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQSDS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 269 KMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLL 348
Cdd:MTH00094 238 KSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 349 IVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMYSSSQHGFFYSGIYSFSTCYFAEFHLLLLHWF 428
Cdd:MTH00094 318 FLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMF 397
|
....*.
gi 1681062985 429 PLNFLF 434
Cdd:MTH00094 398 WLSLFY 403
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-395 |
1.09e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 151.61 E-value: 1.09e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 58 WLMILLSFWICALMMLSSLSIKfmnYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERIS 137
Cdd:MTH00226 106 YFIILTGFIVPCSILISWHSVK---YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 138 ASLYLILYTLLGSLPLLSSILWLEHCLGGLCYLLMFDyCNNI-------YLYLSMIFAFLLKLPLYMFHLWLPSAHVEAP 210
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAS-CSHVvseqtqkWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAP 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 211 ISGSMILAGVLLKLGGYGLIRV-FKFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFT 289
Cdd:MTH00226 262 VAGSVLLAGILLKLGGYGLVRLsWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVT 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 290 MNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILN 369
Cdd:MTH00226 342 HDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSIL 421
|
330 340
....*....|....*....|....*.
gi 1681062985 370 GLISYSFYLMIFLFLLSFFSCVYSLY 395
Cdd:MTH00226 422 SSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-386 |
4.17e-34 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 132.19 E-value: 4.17e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 1 MLIFLLGMLFMIPLVLLSSWWFMQLWLFILSLLFIVIGHFSFFFSN----------------LGFGLGVDFLSWLMILLS 64
Cdd:COG0651 6 ILPVLLPLLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVlaggplvyalggwpapFGIVLVADRLSALFLLLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 65 FWICALMMLSSLSIKFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYqPERISASLYLIL 144
Cdd:COG0651 86 ALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-KEALRAGLKYLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 145 YTLLGSLPLLSSILWLEHCLGGLCYLLMFDYCNNIY------LYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILA 218
Cdd:COG0651 165 LNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDpglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 219 GVLLKLGGYGLIRVFkFIIF---FSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGL 295
Cdd:COG0651 245 GLLTKVGVYAILRVL-TLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGL 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 296 YGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYS 375
Cdd:COG0651 324 AGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAG 403
|
410
....*....|.
gi 1681062985 376 FYLMIFLFLLS 386
Cdd:COG0651 404 AWLLAAVLLLS 414
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-381 |
2.35e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 128.23 E-value: 2.35e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 47 LGFGLGVDFLSWLMILLSFWICALMMLSSLSIkfmNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLI 126
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 127 LGWGYQpERISASLYLILYTLLGSLPLLSSILWLEHCLGGLCY----LLMFDYCNN--IYLYLSMIFAFLLKLPLYMFHL 200
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaeLGAKSYPLAleLLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 201 WLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFI-----IFFSLDYNFYVIIYSLYGGvmvsLICLYQVDLKMLIAYS 275
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMlpdahVYFAPALAILGVVNIIYGA----LNAFAQDNVKRRLAYS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 276 SVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLtlwWFLLIVSNMGS 355
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKT---FALFTASSMAS 359
|
330 340
....*....|....*....|....*....
gi 1681062985 356 ---PFTLNFIGEVMILNGLISYSFYLMIF 381
Cdd:PRK12561 360 lalPGMSGFVSELTVFLGITSSDVYSSTF 388
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-386 |
1.56e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 117.29 E-value: 1.56e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 2 LIFLLGMLFMIPLVLLSSWWFMQLWLFIL-----------SLLFIVIGHFSF------FFSNLGFGLGVDFLSWLMILLS 64
Cdd:PRK08375 7 PLLVAVPLLAAALIVLLPKRRRLRWALALlvaaltfalaiSLLPQVLDGGVIayvvggWPPGIGIELRADSLSALFLLVT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 65 FWICALMMLSSLSIKFMNyfSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLIL 144
Cdd:PRK08375 87 SILAIAALLYAIGYGEHR--QTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 145 YTLLGSLPLLSSILWLEHC----LGGLCYLLMFDYCNNIYLYLsMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGV 220
Cdd:PRK08375 165 GLIGSTFLLIGVGLLYGVTgtlnMADLAGALAENPTVVTAFGF-VLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 221 LLKLGGYGLIR----VFKFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLY 296
Cdd:PRK08375 244 VTKVAVYALIRiyftVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALA 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 297 GSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSF 376
Cdd:PRK08375 324 AGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQ 403
|
410
....*....|
gi 1681062985 377 YLMIFLFLLS 386
Cdd:PRK08375 404 WLVLAVLLAS 413
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
47-370 |
4.49e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 113.26 E-value: 4.49e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 47 LGFGLGVDFLSW-LMILLSFWICALMMLSSLSIKFmnyfSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLML 125
Cdd:PRK06473 71 LSYHLGVDGLSLpLLVLNSLLTLIAIYSSDESIQR----PRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 126 ILGWGYQpERISASLYLILYTLLGSLPLLSSILWlehcLGGLCYLLMFDY----------CNNIYLYLSMIFAFLLKLPL 195
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLG----LVWLSGASSFDYeplrshtlplSTQLLLLAPILVGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 196 YMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIR-----VFKFIIFFSLDYNFYVIIYSLYGgvmvSLICLYQVDLKM 270
Cdd:PRK06473 222 VPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRfgvglFPEAWVYLAPWLATWAVVSVLYG----ASCAIAQKDMKK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 271 LIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIV 350
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMIL 377
|
330 340
....*....|....*....|...
gi 1681062985 351 SNMGS---PFTLNFIGEVMILNG 370
Cdd:PRK06473 378 GVMASagiPGMVGFIAEFLVFRG 400
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
51-388 |
5.30e-27 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 113.12 E-value: 5.30e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 51 LGVDFLSWLMILLSFWICALMMLSSLSIkfmNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWG 130
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPV---TRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 131 YQpERISASLYLILYTLLGSLPLLSSILWLEHCLGGLCYLLMFDYCNNIY-------LYLSMIFAFLLKLPLYMFHLWLP 203
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYpvaleilFYIGFLIAYAVKLPIIPLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 204 SAHVEAPISGSMILAGVLLKLGGYGLIRV-FKFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSL 282
Cdd:CHL00011 236 DTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGF 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 283 VIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERfgSRLFMLNS--GLMSFMPSLTLWWFLLIVSNMGSPFTLN 360
Cdd:CHL00011 316 IIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDR--IRLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSG 393
|
330 340
....*....|....*....|....*...
gi 1681062985 361 FIGEVMILNGLISYSFYLMIFLFLLSFF 388
Cdd:CHL00011 394 FVAELIVFFGIITSQKYLLMPKILITFV 421
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-391 |
9.59e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 109.41 E-value: 9.59e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 47 LGFGLGVDFLSWLMILLSFWICALMMLSSLSIKFMnyfSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLI 126
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWPVTFK---PKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 127 LGWGYQpERISASLYLILYTLLGSLPLLSSILwlehCLGGLCYLLMFDYCN----------NIYLYLSMIFAFLLKLPLY 196
Cdd:PRK02546 156 AIWGGK-KRQYAATKFILYTAGSSLFILLAAL----AMAFYGDTPTFDMTAlaakdfglgfQLLCYAGLLIAYGVKLPIV 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 197 MFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRvFKFIIFFSLDYNF--YVIIYSLYGGVMVSLICLYQVDLKMLIAY 274
Cdd:PRK02546 231 PLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR-MNAGMLPDAHAQFapLLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 275 SSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMG 354
Cdd:PRK02546 310 SSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLA 389
|
330 340 350
....*....|....*....|....*....|....*..
gi 1681062985 355 SPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCV 391
Cdd:PRK02546 390 LPGMSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAV 426
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
47-370 |
9.97e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 103.25 E-value: 9.97e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 47 LGFGLGVDFLSWLMILLSfwiCALMMLSSLSIKFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLI 126
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 127 LGWGYQpERISASLYLILYTLLGSLPLLSSILWLEHCLGGLCY------LLMFDYCNNIYLYLSMIFAFLLKLPLYMFHL 200
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFdydaisTQNLSLNTQLILLTGLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 201 WLPSAHVEAPISGSMILAGVLLKLGGYGLIRvFKFIIF------FSLDYNFYVIIYSLYGgvmvSLICLYQVDLKMLIAY 274
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLR-FGLQLFpqtwslVAPGLAIIGTISVIYG----ALSAIAQKDIKRMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 275 SSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMG 354
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMA 381
|
330
....*....|....*....
gi 1681062985 355 S---PFTLNFIGEVMILNG 370
Cdd:PRK07363 382 SagiPGLVGFVAEFIVFQG 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-386 |
2.32e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 81.17 E-value: 2.32e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 185 MIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFkFIIF--------FSLDYNFYVIIYSLYGGV 256
Cdd:PRK12667 229 ALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFL-YTIFgispslidFRAALSPILIILGAVSAI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 257 MVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMS 336
Cdd:PRK12667 308 IGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGR 387
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1681062985 337 FMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLS 386
Cdd:PRK12667 388 KMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIA 437
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
21-415 |
5.00e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 79.58 E-value: 5.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 21 WFMQLWLFILSLLFIVIGHFSFFFSNLGFGLGVDFLSWLMI-LLSFWICALMMLSSLSIKFM--NYFSGLYMFMVLLLIF 97
Cdd:MTH00062 3 FFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFdSLSFYLILLVLFLGLYSQVMfyNLLSGVSRFFLFLSLI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 98 SLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILWLEHCLGGLcYLLMFDYCN 177
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSF-NFSDWGSDD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 178 NIYL--YLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIiffSLDYNFYVIIYSLYGG 255
Cdd:MTH00062 162 SVSLivYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFI---FSGSFLGYLFLCCLFS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 256 VMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLM 335
Cdd:MTH00062 239 VFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 336 SFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFS----CVYSLYMYSSSQHGFFYSGIYS 411
Cdd:MTH00062 319 NGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGlvplILLGHLLIRSESYESINVSNYS 398
|
....
gi 1681062985 412 FSTC 415
Cdd:MTH00062 399 YLFF 402
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
183-388 |
3.14e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 77.66 E-value: 3.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 183 LSMIFAFLL-----KLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRvFKFIIFFSLDYNFYVIIYSLYGGVM 257
Cdd:PRK06458 213 MKLAFVFLLigfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLR-YYILIDAAIGSDFPGRLLLIFGLLS 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 258 V---SLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGL 334
Cdd:PRK06458 292 VlvaAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGL 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1681062985 335 MSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFF 388
Cdd:PRK06458 372 LKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLT 425
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
43-393 |
4.68e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 74.26 E-value: 4.68e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 43 FFSNLGFGLGVDFLSWLMILLSFWICALMMLSSLSIKFMNyfSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPT 122
Cdd:PRK08668 57 FFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKN--DAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSS 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 123 LMLILGWGYQPERIS--------ASLYLILYTLLGSLPLLSSILWLEhCLGGLCYLLMFDYCNNIYLYLSMifAFLLKLP 194
Cdd:PRK08668 135 FMMVPMGKKESRKASlkyfvlsaIGAYAMLYAIFLIYAKTGTFDFAD-ISQGLINDTSTGFALIVFLFLLA--FGVAKAG 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 195 LYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIIFFSLDYNFYVI--------IYSLYGGVMV---SLICL 263
Cdd:PRK08668 212 IFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYrgvplfnyILAWLGNISIivgTLMAI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 264 YQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTL 343
Cdd:PRK08668 292 LQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFA 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1681062985 344 WWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFL-FLLSFFSCVYS 393
Cdd:PRK08668 372 MYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMaFFGSIGSFLYV 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-392 |
5.96e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 73.61 E-value: 5.96e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 48 GFGLGVDFLSWLMILLSFWICALMMLSSL--SIKFMNYFSGLYMFMVLLLIFS-LFCTFSSLNLFNFYLFFEFSLIPTLM 124
Cdd:PRK12662 69 GIELRVDILSATMLVLVNFIAVMSVLYGIypNRKEISVNKIPSFYSAFLLCLGgLLGILVSNDVFNIYVFLEISSISSYV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 125 LILGWGYQPERISASLYLILYTLLGSLPLLSSILWLEHC----LGGLCYLLMFDYCNNIyLYLSMIFAFL---LKLPLYM 197
Cdd:PRK12662 149 LVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITgtlnMGDMFLIIQDLPTNRA-IQIGVLFIMVglfIKAALFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 198 FHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFI-----IFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLI 272
Cdd:PRK12662 228 FHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIF 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 273 AYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSN 352
Cdd:PRK12662 308 AYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSL 387
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1681062985 353 MGSPFTLNFIGEVMILNGLISYSFYLMIFLFLL-SFFSCVY 392
Cdd:PRK12662 388 IGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVgSGLSVIY 428
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
25-372 |
1.70e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 69.37 E-value: 1.70e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 25 LWLFILSLLFIVIGHFSFFFSN------------LGFGLGVDFLSWLMILLSFWICALMMLSSLSIK---FMNYFSGLYM 89
Cdd:PRK08667 35 LWLVIAIALLLFAGSLQLFTGNpldiplwgiapgLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNehmSSNERANLLS 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 90 FMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILWLEHCLGGLCY 169
Cdd:PRK08667 115 ALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 170 LLMFDYCNNIYL-YLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIIFFSLDYNFYVI 248
Cdd:PRK08667 195 SPLGASAGILSLvFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLIL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 249 IYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGS-----------IFLMLGHGLCSSGLFCLTN 317
Cdd:PRK08667 275 LAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLdtlallalggaLFHSLNHALFKSLLFLTAG 354
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1681062985 318 IVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLI 372
Cdd:PRK08667 355 SVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
185-394 |
4.52e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 64.59 E-value: 4.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 185 MIFAFLLKLPLYMFHlWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKfIIFFSLDYNFYVIIYSLYGGVMV--SLIC 262
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFT-LLFPQERELLHPLLATMAAITMVigALGA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 263 LYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLT 342
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFG 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1681062985 343 LWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSL 394
Cdd:PRK12663 371 ALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-397 |
6.95e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.01 E-value: 6.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 182 YLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIIFFSLDYNFYVII--YSLYGGVMVS 259
Cdd:PRK08676 209 FLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLigLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 260 LICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMP 339
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1681062985 340 SLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSLYMY 397
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-379 |
1.92e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 59.58 E-value: 1.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 2 LIFLLGMLFMIPLVLLSSWWFMQLWLFILSLLFIVIGHFS------FFFSNLGFGLGVDFLSWLMILLS--FWICALMML 73
Cdd:PRK07234 8 WIALPFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASmvplelTLLDNFGVTLRADALSGYFILTNalVTLAVIFYC 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 74 SSlsiKFMNYFsgLYMFMVLLLIfSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLlgslpl 153
Cdd:PRK07234 88 WE---SAKTRF--FYAQLLILHG-SVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNV------ 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 154 lssilwlehclGGLCYLL--MFDYCNNIYLYLS-----------MIFA-FLLKLPLYMFHLWLPSAHVEAPISGSMILAG 219
Cdd:PRK07234 156 -----------AMLFYLIgaVLVYQANGTFAFSglatadpeafaLIALgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSG 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 220 VLLKLGGYGLIRVfkFIIFFSLDynFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMnswGLYGsi 299
Cdd:PRK07234 225 VVVKAGVFPLVRC--ALDVPGLD--LIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG---GLYA-- 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 300 flmLGHGLCSSGLFCLTNIVYERfgsrlfmLNSGLMSFMPSLTLWWFLLI--VSNMGSPFTLNFIGEVMILNGLISYSFY 377
Cdd:PRK07234 296 ---LAHGLVKSTLFLCAGALPSR-------NFTELISQMLGIGKWIPLTMasFSIAGFPLLAGFVSKVLTLKNLLPWQAI 365
|
..
gi 1681062985 378 LM 379
Cdd:PRK07234 366 AL 367
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-343 |
4.96e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.18 E-value: 4.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 53 VDFLSWLMILLSFWICALMMLSSLSikFMNYFSGL--YMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWG 130
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSIS--YMKHDTGLdkYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 131 YQPERISASL-YLILYTLLGSLPLLSSILWLEH----CLGGLCYLLMFDYCNNIYLYLSMIFA-FLLKLPLYMFHLWLPS 204
Cdd:PRK08376 166 DTWEAIEAGIkYMFVGSLASSMVLLGIALLYGQygtlNMAYLAVKMSENPTVVAKIALALFIAgLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 205 AHVEAPISGSMILagVLLKLGG-YGLIRVFkFIIF---FSLDYNFYVIIY----SLYGGVMVSLIclyQVDLKMLIAYSS 276
Cdd:PRK08376 246 AYPAAPSSISAML--LVIKQAGlYALARVL-FSIYgpaINLATVGWVIIIlgclTMFVGVAMAVV---QKDVKRLLAYHS 319
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1681062985 277 VSH---------MSLVIAGIFTMNSWG---LYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTL 343
Cdd:PRK08376 320 VSQigymllglgVGLAALGDPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTI 398
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-394 |
7.28e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 57.65 E-value: 7.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 54 DFLSWLMILLSFWICALMMLSSLSIKFMNYFSGLYMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQP 133
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 134 ErISASLYLILYTLLGSLPLLSSILWLEHCLGGLCyllMFDYCNNI------------YLYLSMIFAFLLKLPLYMFHLW 201
Cdd:PRK07691 156 Q-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLN---MADISVKIaelsagqtglitVVAILFLFVFATKAGLFPLYFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 202 LPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKfiIFFSLDYNFYVIIYSLYGGVMVSLICL---YQVDLKMLIAYSSVS 278
Cdd:PRK07691 232 LPGSYYAPPIAIAALFGALLTKVGVYAIARTFT--LFFSHDTSFTHYLILILALLTIIFGVIgavAYFDIKKIIIYNIMI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 279 HMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFT 358
Cdd:PRK07691 310 AVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPL 389
|
330 340 350
....*....|....*....|....*....|....*.
gi 1681062985 359 LNFIGEVMILNGLISYSFYLMIFLFLLSFFSCVYSL 394
Cdd:PRK07691 390 SGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
9.31e-09 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 52.91 E-value: 9.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 1 MLIFLLGMLFMIPLVLLSSWWFMQLWLFILSLLFIVI------GHFSFFFSNLGFGLGVDFLSWLMILLSFWICALMMLS 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLsllllnNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1681062985 75 SLSIKFM--NYFSGLYMFMVLLLIFSLFCT 102
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
198-362 |
2.05e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 56.59 E-value: 2.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 198 FHLWLPSAHVEA-PISGSMILAGVLlKLGGYGLIRvfkFIIFFSLD--YNFYVIIYSLYGGVMVSLICLYQVDLKMLIAY 274
Cdd:PRK12650 227 FHFWLPEAMAAItPVSAFLHAAAVV-KAGIYLLLR---FSPVFHDVavWNWLLIIVGMITALMGAVFAVQKTDLKKLTAY 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 275 SSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPsLTLWWFLLIVSNM- 353
Cdd:PRK12650 303 STVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTIAALSMa 381
|
....*....
gi 1681062985 354 GSPFTLNFI 362
Cdd:PRK12650 382 AVPPLFGFV 390
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
88-396 |
2.40e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 56.30 E-value: 2.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 88 YMFMVLLLIFSLFCTFSSLNLFNFYLFFEFSLIPTLMLILGWGYQPERISASLYLILYTLLGSLPLlssilwlehcLGGL 167
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLAL----------LVGF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 168 CYLLMFDYCNNI-------------YLYLSMIFAFLL----KLPLYMFHLWLPSAhVEAPISGSMILAGVLLKLGGYGLI 230
Cdd:PRK12646 182 IMLYIMTGTNNIteilgqadhiknhGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 231 RVFKFIIFFSLDYNFYVIIYSLYGGVMVSLICLYQVDLKMLIAYSSVSH----MSLV-IAGIFTMNSWG---------LY 296
Cdd:PRK12646 261 FRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDaiasiyvfvLF 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 297 GSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLIS--- 373
Cdd:PRK12646 341 AALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgq 420
|
330 340 350
....*....|....*....|....*....|
gi 1681062985 374 ---YSFYLMIFLFLL----SFFSCVYSLYM 396
Cdd:PRK12646 421 lsqFSLISMIIIVFIgviaSIFTFTYALYM 450
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
184-384 |
1.45e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 53.62 E-value: 1.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 184 SMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFkFIIFFSLDYN---FYVIIYSLYGGVMVSL 260
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARIL-YLMQNANGWSsvlKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 261 ICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPS 340
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPL 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1681062985 341 LTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFL 384
Cdd:PRK08377 370 TALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVL 413
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-399 |
2.12e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 52.90 E-value: 2.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 44 FSNLGFGLGVDFLSWLMILLS--FWICALM-MLSSLSIKFMNYFSGLYMFMVLLLIFSLFCTFSSlNLFNFYLFFEFSLI 120
Cdd:PRK06589 72 FGNYSIGLHLEPLGLIFLLLIgfLWICALLyTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCYELLTI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 121 PTLMLILGWGYQPERISASLYLILYTLLGSLPLLSSILWLEHCLGGLCYLLMFDYCNNIYLYLSMIFAFLL-KLPLYMFH 199
Cdd:PRK06589 151 STAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIaKTAIFPVH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 200 LWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIifFSLDY-------NFYVIIYSLYGGVMVSLICLYQVDLKMLI 272
Cdd:PRK06589 231 SWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYI--FGLSYlqrifaeFNWLIFIPIVSIFYSSLKALKTDNIKKIL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 273 AYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLLIVSN 352
Cdd:PRK06589 309 AYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSL 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1681062985 353 MGSPFTLNFIGEVMIL-----NGLISYSFYLMIFLFLLSFFSCVYSLYMYSS 399
Cdd:PRK06589 389 IGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSS 440
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-368 |
2.31e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 53.05 E-value: 2.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 181 LYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVfKFIIFFSLDYNFYVIIYSLYGGVMVSL 260
Cdd:PRK12665 211 LFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRT-HTLLFPGGGLDTLLMVVALLTMVVGIL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 261 ICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPS 340
Cdd:PRK12665 290 GAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPL 369
|
170 180
....*....|....*....|....*...
gi 1681062985 341 LTLWWFLLIVSNMGSPFTLNFIGEVMIL 368
Cdd:PRK12665 370 LAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
182-348 |
2.65e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.97 E-value: 2.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 182 YLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRV-FKFIIFFSLDYNFYVIIYSLYGGVMVSL 260
Cdd:PRK06521 213 FLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALGAISAVLGVL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 261 ICLYQVDLKMLIAYSSVSHMSLVIAG-----IF------TMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFM 329
Cdd:PRK06521 293 YALAEHDLKRLLAYSTIENIGIIFVGlglamVFiaygmpLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDME 372
|
170
....*....|....*....
gi 1681062985 330 LNSGLMSFMPsLTLWWFLL 348
Cdd:PRK06521 373 KLGGLIRRMP-WTAWAFLI 390
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
185-397 |
1.15e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.50 E-value: 1.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 185 MIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLlKLGGYG-LIRVFkFIIFFSLDYNFYVIIYSLYGGVMV--SLI 261
Cdd:COG1007 209 VLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLL-VEAFPGLAADWQLLLAVLAVLSMTvgNLA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 262 CLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLF-CLTNIVYERFGSRLFMLNSGLMSFMPS 340
Cdd:COG1007 287 ALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPL 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1681062985 341 LTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFY-LMIFLFLLSFFSCVYSL----YMY 397
Cdd:COG1007 367 LALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYwLAVIAVLNSVISAYYYLrvvkAMY 428
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
185-313 |
9.55e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.43 E-value: 9.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 185 MIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLlKLGGYG-LIRVFkFIIFFSLDYNFYVIIYSLYGGVMV--SLI 261
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLL-VVAFGGLSEDWQQVLAIIAIASMLvgNLA 287
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1681062985 262 CLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLF 313
Cdd:PRK05777 288 ALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
171-386 |
1.88e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 43.78 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 171 LMFDYCNNIYLYLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGLIRVFKFIIF-FSLDYNFYVII 249
Cdd:TIGR01770 195 GMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFgFSEAWQIFLAI 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 250 YSLYGGVMVSLICLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIV--YERFGSRL 327
Cdd:TIGR01770 275 IAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLrsYKDEWIEY 354
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1681062985 328 FMLNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLLS 386
Cdd:TIGR01770 355 ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLT 413
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
181-394 |
7.29e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 41.88 E-value: 7.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 181 LYLSMIFAFLLKLPLYMFHLWLPSAhVEAPISGSMIL-AGVLLKLGGYGLIRVFKFIiffsldyNFYVIIYSLYGGVMVS 259
Cdd:PRK06525 209 VFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSM-------GPIPHVIGYVGAVMAI 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 260 LICLY-------QVDLKMLIAYSSVSHMSLVIAGIFTM---NSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFM 329
Cdd:PRK06525 281 VTLLYgflmylpQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLP 360
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1681062985 330 LNSGLMSFMPSLTLWWFLLIVSNMGSPFTLNFIGEVMILNG--LISYSFYLMIFLFLLSFFSCVYSL 394
Cdd:PRK06525 361 RLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAgfELSVEYWILLPAMVLLLIESVASF 427
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
198-395 |
1.55e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 41.06 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 198 FHLWLPSAhVEAPI-------SGSMILAGVLLklggyglirVFKFIIFFSLDYNFYVIIYSLYGGVMV--SLICLYQVDL 268
Cdd:PRK12644 222 FHFWLPGA-MAAPTpvsaylhAAAMVKAGIYL---------VARLAPGFADVPVWRPTVLVLGLATMLlgGWRALRQHDL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 269 KMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSSGLFCLTNIVYERFGSRLFMLNSGLMSFMPSLTLWWFLL 348
Cdd:PRK12644 292 KLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1681062985 349 IVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLL------SFFSCVYSLY 395
Cdd:PRK12644 372 AASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLagivlgSILTVAYSLR 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
182-385 |
2.06e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 40.01 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 182 YLSMIFAFLLKLPLYMFHLWLPSAHVEAPISGSMILAgVLLKLGgyglirVFKFIIFFSLDYNFYVIIySLYGGVMVSLI 261
Cdd:MTH00196 98 YLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG------IFSILVSIGLNVNILLIG-GLFSLFVGAIG 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681062985 262 CLYQVDLKMLIAYSSVSHMSLVIAGIFTMNSWGLYGSIFLMLGHGLCSsgLFCLTNIVYERFGSRLFMLNSGLMSFMPSL 341
Cdd:MTH00196 170 ALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS--ICVFSIILALNVYKNLIIEFSGLSRRLPIL 247
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1681062985 342 TLWWFLLIVSNMGSPFTLNFIGEVMILNGLISYSFYLMIFLFLL 385
Cdd:MTH00196 248 AITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVF 291
|
|
| |
