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Conserved domains on  [gi|1676323838|dbj|BBD84246|]
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ribosomal protein S24, partial [Drosophila birchii]

Protein Classification

eS24 family ribosomal protein; 30S ribosomal protein S24e( domain architecture ID 10472682)

eS24 family ribosomal protein such as archaea 30S ribosomal protein S24, and fungi 40S ribosomal protein S24; 30S ribosomal protein S24e

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ribosomal_S24e pfam01282
Ribosomal protein S24e;
1-72 1.57e-37

Ribosomal protein S24e;


:

Pssm-ID: 460147  Cd Length: 79  Bit Score: 119.90  E-value: 1.57e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1676323838  1 GLSSVNKTEIREKLAAMYKVTPDVVFVFGFRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQ 72
Cdd:pfam01282  8 GKATPSRKEIREKLAAMYNVDPDLVVVFGLRTHFGGGKSTGFAKIYDSLEAAKKFEPKHRLARNGLAEKKKA 79
 
Name Accession Description Interval E-value
Ribosomal_S24e pfam01282
Ribosomal protein S24e;
1-72 1.57e-37

Ribosomal protein S24e;


Pssm-ID: 460147  Cd Length: 79  Bit Score: 119.90  E-value: 1.57e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1676323838  1 GLSSVNKTEIREKLAAMYKVTPDVVFVFGFRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQ 72
Cdd:pfam01282  8 GKATPSRKEIREKLAAMYNVDPDLVVVFGLRTHFGGGKSTGFAKIYDSLEAAKKFEPKHRLARNGLAEKKKA 79
PTZ00071 PTZ00071
40S ribosomal protein S24; Provisional
 1-80 1.36e-30

40S ribosomal protein S24; Provisional


Pssm-ID: 240256  Cd Length: 132  Bit Score: 104.34  E-value: 1.36e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1676323838   1 GLSSVNKTEIREKLAAMYKVT-PDVVFVFGFRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQTRKQRKE 79
Cdd:PTZ00071   32 GKGTVSKKDIKEKLAKQYKVAdARTIVLFGFKTKFGGGKTTGFGLIYDNLAALKKFEPKYRLIRLGLIKKKKAGRKARKE 111


                  .
gi 1676323838  80 R 80
Cdd:PTZ00071  112 L 112
RPS24A COG2004
Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]; Ribosomal protein ...
 9-72 8.10e-19

Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]; Ribosomal protein S24E is part of the Pathway/BioSystem: Archaeal ribosomal proteins


Pssm-ID: 441607  Cd Length: 97  Bit Score: 73.33  E-value: 8.10e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1676323838  9 EIREKLAAMYKVTPDVVFVFGFRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQ 72
Cdd:COG2004   34 EVREKLAAMLNVDKELVVVDKLKTEFGKGESKGYAKVYDDEERAKKIEPEYILKRNKIKEEEEE 97
 
Name Accession Description Interval E-value
Ribosomal_S24e pfam01282
Ribosomal protein S24e;
1-72 1.57e-37

Ribosomal protein S24e;


Pssm-ID: 460147  Cd Length: 79  Bit Score: 119.90  E-value: 1.57e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1676323838  1 GLSSVNKTEIREKLAAMYKVTPDVVFVFGFRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQ 72
Cdd:pfam01282  8 GKATPSRKEIREKLAAMYNVDPDLVVVFGLRTHFGGGKSTGFAKIYDSLEAAKKFEPKHRLARNGLAEKKKA 79
PTZ00071 PTZ00071
40S ribosomal protein S24; Provisional
 1-80 1.36e-30

40S ribosomal protein S24; Provisional


Pssm-ID: 240256  Cd Length: 132  Bit Score: 104.34  E-value: 1.36e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1676323838   1 GLSSVNKTEIREKLAAMYKVT-PDVVFVFGFRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQTRKQRKE 79
Cdd:PTZ00071   32 GKGTVSKKDIKEKLAKQYKVAdARTIVLFGFKTKFGGGKTTGFGLIYDNLAALKKFEPKYRLIRLGLIKKKKAGRKARKE 111


                  .
gi 1676323838  80 R 80
Cdd:PTZ00071  112 L 112
RPS24A COG2004
Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]; Ribosomal protein ...
 9-72 8.10e-19

Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]; Ribosomal protein S24E is part of the Pathway/BioSystem: Archaeal ribosomal proteins


Pssm-ID: 441607  Cd Length: 97  Bit Score: 73.33  E-value: 8.10e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1676323838  9 EIREKLAAMYKVTPDVVFVFGFRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKKQ 72
Cdd:COG2004   34 EVREKLAAMLNVDKELVVVDKLKTEFGKGESKGYAKVYDDEERAKKIEPEYILKRNKIKEEEEE 97
rps24e PRK01178
30S ribosomal protein S24e; Reviewed
 9-71 1.60e-15

30S ribosomal protein S24e; Reviewed


Pssm-ID: 179239  Cd Length: 99  Bit Score: 64.90  E-value: 1.60e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1676323838  9 EIREKLAAMYKVTPDVVFVFGFRTNFGGGRSTGFALIYDTLDFAKKFEPKYRLARHGLFEQKK 71
Cdd:PRK01178  35 DVRKKLAAMLNADKELVVVRKIKTEYGMGKSKGYAKVYDDKERARKIEPKYILERNKIEEEEE 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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