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Conserved domains on  [gi|1676322895|dbj|BBD84091|]
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ribosomal protein S17, partial [Drosophila fuyamai]

Protein Classification

eS17 family ribosomal protein( domain architecture ID 10467170)

eS17 family ribosomal protein is a component of the small ribosomal subunit.

Gene Ontology:  GO:0003735|GO:0006412
PubMed:  24524803

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Ribosomal_S17e pfam00833
Ribosomal S17;
1-59 5.45e-35

Ribosomal S17;


:

Pssm-ID: 425895  Cd Length: 122  Bit Score: 113.88  E-value: 5.45e-35
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1676322895   1 KRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSA 59
Cdd:pfam00833  32 KRICEEVAIIPSKRLRNKIAGYVTHLMKRIQRGPVRGISLKLQEEERERRDNYVPEVSA 90
 
Name Accession Description Interval E-value
Ribosomal_S17e pfam00833
Ribosomal S17;
1-59 5.45e-35

Ribosomal S17;


Pssm-ID: 425895  Cd Length: 122  Bit Score: 113.88  E-value: 5.45e-35
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1676322895   1 KRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSA 59
Cdd:pfam00833  32 KRICEEVAIIPSKRLRNKIAGYVTHLMKRIQRGPVRGISLKLQEEERERRDNYVPEVSA 90
PTZ00154 PTZ00154
40S ribosomal protein S17; Provisional
 1-58 1.94e-31

40S ribosomal protein S17; Provisional


Pssm-ID: 240295  Cd Length: 134  Bit Score: 105.50  E-value: 1.94e-31
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1676322895   1 KRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVS 58
Cdd:PTZ00154   32 KKIVEEVAIIPSKRLRNKIAGFVTHLMKRIQKGPVRGISLKLQEEERERRMDYVPEKS 89
RPS17A COG1383
Ribosomal protein S17E [Translation, ribosomal structure and biogenesis]; Ribosomal protein ...
 1-32 3.33e-07

Ribosomal protein S17E [Translation, ribosomal structure and biogenesis]; Ribosomal protein S17E is part of the Pathway/BioSystem: Archaeal ribosomal proteins


Pssm-ID: 440993  Cd Length: 63  Bit Score: 41.77  E-value: 3.33e-07
                         10        20        30
                 ....*....|....*....|....*....|..
gi 1676322895  1 KRICEEVAIIPTKPLRNKIAGYVTHLMGRLRH 32
Cdd:COG1383   32 KKLVEELTDVESKRVRNRIAGYITRKVKKRKR 63
 
Name Accession Description Interval E-value
Ribosomal_S17e pfam00833
Ribosomal S17;
1-59 5.45e-35

Ribosomal S17;


Pssm-ID: 425895  Cd Length: 122  Bit Score: 113.88  E-value: 5.45e-35
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1676322895   1 KRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSA 59
Cdd:pfam00833  32 KRICEEVAIIPSKRLRNKIAGYVTHLMKRIQRGPVRGISLKLQEEERERRDNYVPEVSA 90
PTZ00154 PTZ00154
40S ribosomal protein S17; Provisional
 1-58 1.94e-31

40S ribosomal protein S17; Provisional


Pssm-ID: 240295  Cd Length: 134  Bit Score: 105.50  E-value: 1.94e-31
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1676322895   1 KRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVS 58
Cdd:PTZ00154   32 KKIVEEVAIIPSKRLRNKIAGFVTHLMKRIQKGPVRGISLKLQEEERERRMDYVPEKS 89
rps17E PRK01151
30S ribosomal protein S17e; Validated
 1-28 1.09e-07

30S ribosomal protein S17e; Validated


Pssm-ID: 179234  Cd Length: 58  Bit Score: 42.94  E-value: 1.09e-07
                         10        20
                 ....*....|....*....|....*...
gi 1676322895  1 KRICEEVAIIPTKPLRNKIAGYVTHLMG 28
Cdd:PRK01151  31 KKLVEELTNIESKKVRNRIAGYITRKVK 58
RPS17A COG1383
Ribosomal protein S17E [Translation, ribosomal structure and biogenesis]; Ribosomal protein ...
 1-32 3.33e-07

Ribosomal protein S17E [Translation, ribosomal structure and biogenesis]; Ribosomal protein S17E is part of the Pathway/BioSystem: Archaeal ribosomal proteins


Pssm-ID: 440993  Cd Length: 63  Bit Score: 41.77  E-value: 3.33e-07
                         10        20        30
                 ....*....|....*....|....*....|..
gi 1676322895  1 KRICEEVAIIPTKPLRNKIAGYVTHLMGRLRH 32
Cdd:COG1383   32 KKLVEELTDVESKRVRNRIAGYITRKVKKRKR 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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