|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
3.27e-162 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 457.00 E-value: 3.27e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 1 MNPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFME 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 81 SGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNLLMFSGLL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 161 SIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLI 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 241 MILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKWKYTNL 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
....*..
gi 166851948 321 SYSTLLP 327
Cdd:MTH00105 321 KPMTLLP 327
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
1.67e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 366.44 E-value: 1.67e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 1 MNPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFME 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 81 SGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSiNYNLLMFSGLL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 161 SIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLI 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 241 MILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKWKYTNL 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....*.
gi 166851948 321 SYSTLL 326
Cdd:MTH00135 320 QLTLPL 325
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
5.09e-116 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 339.49 E-value: 5.09e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 1 MNPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFME 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 81 SGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNLLMFSGLL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 161 SIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLI 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 241 MILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKWKYTNL 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
....*
gi 166851948 321 SYSTL 325
Cdd:MTH00112 321 KNTLT 325
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
1.97e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 328.03 E-value: 1.97e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 1 MNPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFME 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 81 SGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNLLMFSGLL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 161 SIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLI 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 241 MILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKWKYTNL 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*
gi 166851948 321 SYSTL 325
Cdd:MTH00070 321 TNNLL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-316 |
5.57e-86 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 262.98 E-value: 5.57e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 1 MNPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFME 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 81 SGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNLLMFSGLL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 161 SIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLI 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 166851948 241 MILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKWK 316
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWR 316
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-319 |
5.66e-79 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 245.23 E-value: 5.66e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 1 MNPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFME 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 81 SGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNLLMFSGLL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 161 SIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLI 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 166851948 241 MILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKWKYTN 319
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSG 319
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
2.50e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 186.57 E-value: 2.50e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 1 MNPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMe 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 81 sgqwtIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIypsINYNLLMFSGLL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 161 SIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLI 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 241 MILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKWKYTNL 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFS 312
|
....*.
gi 166851948 321 SYSTLL 326
Cdd:MTH00160 313 LILNFL 318
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
10-315 |
1.79e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 178.93 E-value: 1.79e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 10 LSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMESGQWTIMSF 89
Cdd:MTH00144 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSMSL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 90 MnslpsflaLLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSIN-YNLLMFSGLLSIILGGWG 168
Cdd:MTH00144 90 L--------LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWlAYLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 169 GLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLaIMSNKAPLIMILFMGIL 248
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL-GSLKPSYKTGLSIISLL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 166851948 249 LSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKW 315
Cdd:MTH00144 241 LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-300 |
3.60e-52 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 175.35 E-value: 3.60e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 7 SIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMESgqwti 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFP----- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 87 mSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNLLMFSGLLSIILGG 166
Cdd:MTH00011 84 -SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 167 WGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLIMILFMG 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 166851948 247 ILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSS 300
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNF 296
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
7-300 |
8.38e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 142.89 E-value: 8.38e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 7 SIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMESgqwti 86
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL----- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 87 msFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILyqIYPSINYNLLMFSGLLSIILGG 166
Cdd:MTH00197 76 --YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 167 WGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIMSNKAPLIMILFMG 246
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 166851948 247 ILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSS 300
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS 285
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-326 |
2.85e-32 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 123.60 E-value: 2.85e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 13 LILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNP-RSIEAATKYFLTQATAS-MILFLAAL------------TNF 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSgLFLFGCALlcgttgglhlsyINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 79 MESGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPsiNYNLLMFSG 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 159 LLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIII----IYEPTLMLLYLTIYIIMTLSSFM--LLMGSSNTSTATLAI 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 233 MSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRL---IYSSALTMFPSTN 309
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIvkiLFFQANSFLLIST 319
|
330
....*....|....*..
gi 166851948 310 NMKIKWKYTNLSYSTLL 326
Cdd:MTH00196 320 KILKKENKINLRKALLI 336
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
6-298 |
2.30e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 122.82 E-value: 2.30e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 6 FSIILSTLILGTLITMISSNWLMAWMGLEINMFAI-IPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMESGQW 84
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 85 TIMSfMNSLPS-----FLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINynLLMFSGL 159
Cdd:MTH00199 179 SIQG-INSILTgdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAV 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 160 LSIILGGWGGLNQTQLRKILAYSSIAHMGW----MAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAI--M 233
Cdd:MTH00199 256 LSIIYGAIGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKGLIVEVsgL 335
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 166851948 234 SNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIY 298
Cdd:MTH00199 336 SRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQ 400
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-298 |
3.77e-31 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 122.53 E-value: 3.77e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 6 FSIILSTLiLGTLITMISSNWLMAWMGLEINMFAIIPMI-IKNHNPRSIEAATKYFLTQATASMIL-----FLAALTNFM 79
Cdd:COG1007 105 YALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALKYFLLGALSSGFLlygisLLYGATGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 80 ESGQWTIMSFMNSLPSFLALLALIM-------KLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQI------- 145
Cdd:COG1007 184 NLAGIAAALAAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLlveafpg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 146 YPSINYNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTL----MLLYLTIYIIMTLSSFMLLMG 221
Cdd:COG1007 264 LAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 222 SSNTSTATLAI-----MSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRL 296
Cdd:COG1007 344 LSRKGGEAEEIedlagLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
..
gi 166851948 297 IY 298
Cdd:COG1007 424 VK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-297 |
8.13e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 112.99 E-value: 8.13e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 14 ILGTLITMISSNWLMAWMGLEINMFAIIPMI-IKNHNPRSIEAATKYFLTQATAS-MILFLAAL-------TNFMESGQW 84
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAaLRRDRRRSLEAAIKYFVLGALASgFLLYGMSLlygatgsLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 85 TIMSFMNSLPSFLALLALIM----KLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQI-------YPSINYNL 153
Cdd:PRK05777 193 LADGSGNSLLLLFGLVFLLVglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLlvvafggLSEDWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 154 LMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTL----MLLYLTIYIIMTLSSFMLLM-----GSSN 224
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAFGVISllrrkGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166851948 225 TSTATLAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLI 297
Cdd:PRK05777 353 ESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVI 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
2.53e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.86 E-value: 2.53e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 23 SSNWLMAWMGLEINMFAIIPMIIKNH-NPRSIEAATKYFLTQATASMILFLAALTNFMESG-----------QWTIMSFM 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGkSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 91 NSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILL-TWQKLAPLSI-----LYQIYPSINYNLLMFSGLLSIIL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLirrslLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 165 GGWGGLNQTQLRKILAYSSIAHMGWMAIII----IYEPTLMLLYLTIYIIMTLSSFM--LLMGSSNTSTATLAIM---SN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcaGSVIYRRVHTRNIRDYgglAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 166851948 236 KAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLA 286
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-297 |
1.52e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.79 E-value: 1.52e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 6 FSIILSTLILGTLITMISSNWLMAWMGLEINMFAI-IPMIIKNHNPRSIEAATKYFLTQATASMILF------------- 71
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLfgisliygftgsl 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 72 -LAALTNFMESGQWTIMSFMNSLPSFLAllALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSI- 149
Cdd:TIGR01770 184 nFEDLLLFLSNGMLNISLLLLGIVLILV--GLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIl 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 150 ------NYNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTL----MLLYLTIYIIMTLSSFMLL 219
Cdd:TIGR01770 262 fgfseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 220 MGSSNT------STATLAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFY 293
Cdd:TIGR01770 342 SLLRSYkdewieYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYY 421
|
....
gi 166851948 294 MRLI 297
Cdd:TIGR01770 422 LRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
5-298 |
2.38e-19 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 88.28 E-value: 2.38e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 5 IFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMESGQW 84
Cdd:COG0651 108 RFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 85 TIMSFMNSLPSF----------LALLALIMKLGMAPFHFWVPEV-TQGSYLTSA--AILLTwqKLAPLSIL---YQIYPS 148
Cdd:COG0651 188 NMADLAARLAELdpglllaafaLLLVGFGIKAALFPLHFWLPDAyPAAPSPVSAllSGLLT--KVGVYAILrvlTLLFGA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 149 INYN----LLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIII-IYEPTLM---LLYLTIYIIMTLSSFM--- 217
Cdd:COG0651 266 DPALflgtLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLgLGTPLGLagaLFHLLNHALAKALLFLaag 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 218 -LLMGSSNTSTATLAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRL 296
Cdd:COG0651 346 aIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
..
gi 166851948 297 IY 298
Cdd:COG0651 426 FG 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
49-263 |
8.73e-19 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 87.03 E-value: 8.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 49 NPRSIEAATKYFLTQATASMI-LFLAALTNFMESGQWTIMSFMNSL---PSFLALLALIM-------KLGMAPFHFWVPE 117
Cdd:PRK02504 156 DPRSNEAALKYLLIGAASSAIfLYGSSLLYGLSGGSTQLSAIALALitsPSLGLALALVFviagiafKISAVPFHQWTPD 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 118 VTQGSYLTSAAILLTWQKLA----PLSILYQIYPSINYNL-LMFSGL--LSIILGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK02504 236 VYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEQWkLLFTALaiLSMVLGNVVALAQTSMKRMLAYSSIGQAGFV 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 191 AIIIIYEP----TLMLLYLTIYIIMTLSSFM-LLMGSSNTST---ATLAIMSNKAPLIMILFMGILLSMGGLPPLSGFMP 262
Cdd:PRK02504 316 MIGLVAGTeagyASMVFYLLAYLFMNLGAFAcVILFSLRTGTdqiSDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFG 395
|
.
gi 166851948 263 K 263
Cdd:PRK02504 396 K 396
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-297 |
5.69e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 81.83 E-value: 5.69e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 15 LGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSI---------EAATKYFLTQATASMILFLAALTNFMESGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 84 --WTIMSF----------MNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYpsINY 151
Cdd:MTH00198 279 mlGTILSAtlettnielrQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLV--ITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 152 NLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIII---IYEP-TLMLLYLTIYIIMTLSSFMLLM----GSS 223
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagTYESlQASWTYAVTYLVSALASFTVICtleeFGT 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 224 NTSTAT-----------------LAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTK---NSSIIMPFIMA 283
Cdd:MTH00198 437 RTPTSRqrdgsfgnynlvrrlvdLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKiafSSSLSIYYLVA 516
|
330
....*....|....*...
gi 166851948 284 TLALL----NLYFYMRLI 297
Cdd:MTH00198 517 LFAIIctciSAFYYIRIV 534
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-297 |
2.23e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 73.88 E-value: 2.23e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 51 RSIEAATKYFLTQATASMILFLAALTNFMESGQWTIMS----------FMNSLPSFLALLALIM----KLGMAPFHFWVP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQeivnglintqMYNSPGISIALIFITVgigfKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 117 EVTQGSYLTSAAILLTWQKLAPLS----ILYQIYPSIN---YNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASAlatrIFDIPFYFSSnewHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 190 MAI-IIIYEP----TLMLLYLTIYIIMTLSSFM-LLMGSSNTSTATL---AIMSNKAPLIMILFMGILLSMGGLPPLSGF 260
Cdd:CHL00049 319 VIIgIIVGDSndgyASMITYMLFYIFMNLGTFAcIVLFGLRTGTDNIrdyAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
250 260 270
....*....|....*....|....*....|....*..
gi 166851948 261 MPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLI 297
Cdd:CHL00049 399 FGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKII 435
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
7.83e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 62.97 E-value: 7.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 33 LEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMESGQWTIMSFMNSLPS--------FLALLALIM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAEnptvvtafGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 105 KLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSI----------NYNLLMFSGLLSIILGGWGGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdfrfalgLGWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 175 LRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYI----------IMTLSSFMLLMGSSNTStaTLAIMSNKAPLIMILF 244
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhalmkgalFLAAGAIEVTYGTRRLS--ELSGLGRRMPLTAAAF 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 166851948 245 MGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIY 298
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
50-292 |
1.85e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 61.64 E-value: 1.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 50 PRSIEAATKYFLTQATASMILFLAALTNFMESGQWT--IMSFMN-SLPS------FLALL-ALIMKLGMAPFHFWVPEV- 118
Cdd:COG1008 157 ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdIAELAAaPLPLtaqlllFLAFFiAFAVKVPMFPFHTWLPDAh 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 119 TQGSYLTS---AAILLtwqKLAP---LSILYQIYP--SINY-NLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGw 189
Cdd:COG1008 237 VEAPTAGSvllAGVLL---KMGGyglLRFALPLFPeaSAYFaPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG- 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 190 maiiiiyeptLMLLYLTIYIIMTLSSFMLLMGSSNTSTATLAIM-------------------SNKAPLIMILFMGILLS 250
Cdd:COG1008 313 ----------FVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLvgvlydrthtrdiadlgglAKRMPVLAALFLLAALA 382
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 166851948 251 MGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYF 292
Cdd:COG1008 383 SLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYL 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-299 |
2.39e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 61.53 E-value: 2.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 48 HNPRSIEAATKYFLTQATASMILFLA----------------ALTNFMESGQWTIMSFMNSLPSF-----LALLALIMKL 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLAlaflyatfgtlnmadlSAKIRGLSFPLTGGLAGNPPLALgvalaLALWAFTIKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 107 GMAPFHFWVPEVTQGSYLTSAAIL----LTWQKLAPLSILYQIYPSINY---------NLLMFSGLLSIILGGWGGLNQT 173
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLsglvVNVGAYAIIRFLYTIFGISPSlidfraalsPILIILGAVSAIIGALMMVVQK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 174 QLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIM-TLSSFMLLMGS-------SNTSTATLAIMSNKAPLIMILFM 245
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINhAIAKSLLFLASgvfihaaGTRDIDELAGLGRKMPIASFAFL 397
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 166851948 246 GILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYS 299
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
1.12e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.57 E-value: 1.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 50 PRSIEAATKYFLTQATASMILFLAAL---------TNFMESGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEV-T 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILglyflgggtFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 120 QGSYLTS---AAILLTWQKLAPLSILYQIYPS---INYNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAII 193
Cdd:TIGR01972 232 EAPTAGSvilAGVLLKMGTYGFLRFNLPLFPDaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 194 IIYEPTLMLLYLTIYII---MTLSSFMLLMG-----SSNTSTATLAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWL 265
Cdd:TIGR01972 312 IFSFNELGISGAVFQMIshgLITAALFLLVGvlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
...
gi 166851948 266 VIQ 268
Cdd:TIGR01972 392 ILL 394
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-299 |
1.85e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 55.59 E-value: 1.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 6 FSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAAL------TNFM 79
Cdd:PRK06589 118 FLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAViliytkTGNL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 80 ESGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSI---------- 149
Cdd:PRK06589 198 DFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIfglsylqrif 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 150 -NYNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYII---MTLSSFMLLMGSSNT 225
Cdd:PRK06589 278 aEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVshsFAKICLFYSMGSIYS 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 226 STAT-----LAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATL----ALLNLYFYMRL 296
Cdd:PRK06589 358 LKKEdqvdkLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviasSILSALYLLKI 437
|
...
gi 166851948 297 IYS 299
Cdd:PRK06589 438 LSS 440
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
47-298 |
2.98e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 55.16 E-value: 2.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 47 NHNPRSIEAATKYFLTQATASMILFLAALTNFMESGQWTIMSFMNSLPSF-------LALLALIM----KLGMAPFHFWV 115
Cdd:COG1009 155 YEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIlssplltLILLLLLLgafgKSAQFPLHFWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 116 PE-----------------VTQGSYLtsaailltwqkLAPLSILYQIYPSINYnLLMFSGLLSIILGGWGGLNQTQLRKI 178
Cdd:COG1009 235 PDamegptpvsallhaatmVKAGVYL-----------LARLSPLFALSPVWLT-VVAIIGAITALFAALIALAQTDIKRV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 179 LAYSSIAHMGWMaiiiiyepTLML----LYLTIYIIMTLSSFM--LLMGSS----NTSTATLAIMSN---KAPLIMILFM 245
Cdd:COG1009 303 LAYSTVSQLGYM--------FLALgvgaYVAALFHLLTHAFFKalLFLGAGsvihATGTRDIRKMGGlrkKMPITAITFL 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 166851948 246 GILLSMGGLPPLSGFMPKWLVIQEM--TKNSSIIMPFIMATLALLNLYFYMRLIY 298
Cdd:COG1009 375 IGALSLAGIPPFAGFFSKEAILEAAleAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-299 |
1.02e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.56 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 13 LILGTLITMISSNWLMAWMGLEINMFAIIPMI-IKNHNPRSIEAATKYFLTQATASMILFLAALTNFMESGQWT---IMS 88
Cdd:PRK08376 130 LELGMLGMAITGDLFNFFVFLEIMSIASYALVaFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNmayLAV 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 89 FMNSLPSFLALLA-------LIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQK---LAPLSILYQIY-PSINYN----L 153
Cdd:PRK08376 210 KMSENPTVVAKIAlalfiagLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQaglYALARVLFSIYgPAINLAtvgwV 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 154 LMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAI-----IIIYEPTLML----------LYLTIYIIMTLSSFML 218
Cdd:PRK08376 290 IIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLglgvgLAALGDPAMAsygeialaggIYHIVNHALYKALLFL 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 219 LMGSSNTSTAT-----LAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLAlLNLYFY 293
Cdd:PRK08376 370 TAGAVIYETGTrnlneLGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSV-LTLASF 448
|
....*.
gi 166851948 294 MRLIYS 299
Cdd:PRK08376 449 VKVFHT 454
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-263 |
2.72e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.23 E-value: 2.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 81 SGQWTIMSFMNSLPSFLAL---LALIM-----KLGMAPFHFWVPEVTQG-----SYLTSAA-----ILLtwqkLAPLSIL 142
Cdd:PRK12644 184 AGTYRLSELLADPPTGPAVsvaVVLILvgalsKSAIVPFHFWLPGAMAAptpvsAYLHAAAmvkagIYL----VARLAPG 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 143 YQIYPSINYNLLMFsGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIII-IYEPTLMLLYLTiyiiMTLSSFM---- 217
Cdd:PRK12644 260 FADVPVWRPTVLVL-GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLA----MLLAHALfkaa 334
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 166851948 218 --LLMGSSNTSTAT-----LAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPK 263
Cdd:PRK12644 335 lfLVVGIIDHSTGTrdirkLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-263 |
7.74e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.81 E-value: 7.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 110 PFHFWVPE----VTQGS-YLTSAA-----ILLtwqkLAPLSILYQIYPSINYnLLMFSGLLSIILGGWGGLNQTQLRKIL 179
Cdd:PRK12650 226 PFHFWLPEamaaITPVSaFLHAAAvvkagIYL----LLRFSPVFHDVAVWNW-LLIIVGMITALMGAVFAVQKTDLKKLT 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 180 AYSSIAHMGWM-AIIIIYEPtlmlLYLTIYIIMTL------SSFMLLMGSSNTSTAT-----LAIMSNKAPLIMILFMGI 247
Cdd:PRK12650 301 AYSTVSQLGWIvATIGVGTP----FALTAAVVHTLahalfkSSLFMLIGVVDHQAGTrdirrLGSLWRRMPFTFVSVTIA 376
|
170
....*....|....*.
gi 166851948 248 LLSMGGLPPLSGFMPK 263
Cdd:PRK12650 377 ALSMAAVPPLFGFVSK 392
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
142-294 |
1.96e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.18 E-value: 1.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 142 LYQIYPSINYNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWM-AIIIIYEPTLM--LLYLTIYIIMTLSSFML 218
Cdd:PRK12663 263 LFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFIlLGLALGTPAGIngAIFYLVHDMVVKTALFL 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 219 LMGSSN-----TSTATLAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKN------SSIIMPFIMATLAL 287
Cdd:PRK12663 343 IAGSLVrltgyRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNgayillALMLITSLITMYSL 422
|
....*..
gi 166851948 288 LNLYFYM 294
Cdd:PRK12663 423 FRIFFLA 429
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
2.26e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 49.20 E-value: 2.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 97 LALLALIMKLGMAPFHFWVPEvtqgSYLTSAAI-------LLTwqKLAPLSILYQ---IYP--SINyNLLMFSGLLSIIL 164
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPD----SYPTAPAPvtavfagLLT--KVGVYAIIRThtlLFPggGLD-TLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 165 GGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLML---LYLTIYIIMTLSSFMLLMG-----SSNTSTATLAIMSNK 236
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgaIYYVAHHITVQTTLFLVVGlierqAGSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|..
gi 166851948 237 APLIMILFMGILLSMGGLPPLSGFMPKWLVIQ 268
Cdd:PRK12665 367 SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-268 |
4.34e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 48.39 E-value: 4.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 10 LSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFL------TQATASMILFLAALTNFMESGQ 83
Cdd:PRK06458 114 YQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDGE 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 84 ----WTIMSFMNSL--PSFLAL---LALI---MKLGMAPFHFWVPEV-TQGSYLTSA---AILLTwqklAPLSILYQIYP 147
Cdd:PRK06458 194 mailWTELLKHASLldPTLMKLafvFLLIgfgTKVGLFPMHAWLPDAhSEAPSPVSAllsGVLLN----VALYAVLRYYI 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 148 SINYN--------LLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIM---TLSSF 216
Cdd:PRK06458 270 LIDAAigsdfpgrLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhslTKSAI 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 166851948 217 MLLMGSSNTSTATLAI-----MSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQ 268
Cdd:PRK06458 350 FFASGNVLQKYGTRDInvirgLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-260 |
6.17e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.72 E-value: 6.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 55 AATKYFLTQATASMILFLAALTNFMESGQWTI-MS--FMNSLPSFLALLA----LI---MKLGMAPFHFWVP----EVTQ 120
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTFTFdLAelGAKSYPLALELLLyagfLIafgVKLPIFPLHTWLPdahgEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 121 GSYLTSAAILLTWQKLAPLSILYQIYPSINYNL---LMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYE 197
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFapaLAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAF 297
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166851948 198 PTL-----MLLYLTIYIIMtlSSFMLLMGSSNTSTATLAI-----MSNKAPLIMILFMGILLSMGGLPPLSGF 260
Cdd:PRK12561 298 TDLgisgaMLQMISHGLIA--AALFFLTGVTYERTHTLSIpnmggLAKVMPKTFALFTASSMASLALPGMSGF 368
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-282 |
7.22e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 47.68 E-value: 7.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 2 NPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIpMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMES 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 82 GQWTIMSFMNSLPS-----------FLALLALIMKLGMAPFHFWVPE-----------------VTQGSY--LTSAAILL 131
Cdd:PRK08668 175 GTFDFADISQGLINdtstgfalivfLFLLAFGVAKAGIFPLHVWAPDayseapqsfsavlsgqlSKLGAYgfLLVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 132 TwQKLAPLSILYQIYPSINYnLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLML---LYLTIY 208
Cdd:PRK08668 255 G-TKLFSEFGTYRGVPLFNY-ILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFaggLFHVFN 332
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 166851948 209 IIMTLSSFMLLMGSSNTSTATLAI-----MSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIM 282
Cdd:PRK08668 333 HALFKGLFFLIFAAVIYRTGTTKIsemggLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-296 |
9.23e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 47.25 E-value: 9.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 95 SFLALLALIMKLGMAPFHFWVPevtqGSYLTS-AAI------LLT----WQKLAPLSILYQIYPSINYNLLMFSGLLSII 163
Cdd:PRK07691 212 AILFLFVFATKAGLFPLYFWLP----GSYYAPpIAIaalfgaLLTkvgvYAIARTFTLFFSHDTSFTHYLILILALLTII 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 164 LGGWGGLNQTQLRKILAYSSIAHMGWMAI-IIIYEPTLML--LYLTIYIIMTLSSFMLLMGSSN--TSTATLAIMS---N 235
Cdd:PRK07691 288 FGVIGAVAYFDIKKIIIYNIMIAVGVILVgVAMMTESGMIgaIYYLIHDMIVKAALFLLIGIMIkiTGTTDLKKMGgliK 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 166851948 236 KAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRL 296
Cdd:PRK07691 368 RYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-278 |
9.40e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.52 E-value: 9.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 48 HNPRSIEAATKYFLTQATASMILFLAALTNFMESGQWTIMSFMNSL---------PSFLALLALIM-----KLGMAPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSelienikghPLFLITLILIFigaaaKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 114 WVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSIN-----YNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSgteawFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 189 WMAIIIIY----EPTLMLLYLTIYII--MTLSSFMLLMGSSNTSTAT------LAIMSNKAPLIMILFMGILLSMGGLPP 256
Cdd:PRK12649 316 YLMTMYGYttyhEPGLGVAAATFHLLnhATFKACLFLVAGIVAHEAAtrdirkLGGLRKEMPITFIVASIAALAMAGIPP 395
|
250 260
....*....|....*....|..
gi 166851948 257 LSGFMPKwlviqEMTKNSSIIM 278
Cdd:PRK12649 396 LNGFLSK-----EMFYETSVEM 412
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
1.85e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.35 E-value: 1.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 50 PRSIEAATKYFLTQATASMILFLA----ALTNFMESGQWTIMSFMN-SLPSFLA-------LLALIMKLGMAPFHFWVPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNlPLPPGVQywlflafFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 118 V-----TQGSYLTsAAILLTWQKLAPLSILYQIYPSINYN---LLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGW 189
Cdd:PRK05846 237 AhvqapTAGSVLL-AGILLKMGAYGLLRFSLPLFPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
....*
gi 166851948 190 MAIII 194
Cdd:PRK05846 316 VTLGI 320
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-286 |
1.85e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 46.24 E-value: 1.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 55 AATKYFLTQATASMILFLAALTnfmesgqwtiMSFMNSLPSF----LA----------------LLALIMKLGMAPFHFW 114
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALA----------MAFYGDTPTFdmtaLAakdfglgfqllcyaglLIAYGVKLPIVPLHTW 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 115 VP----EVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYN---LLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHM 187
Cdd:PRK02546 236 LPdahgEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHM 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 188 GWMAIIIIYEPTL-----MLLYLTIYIIMtlSSFMLLMGSSNTSTATLAI-----MSNKAPLIMILFMGILLSMGGLPPL 257
Cdd:PRK02546 316 GFVLIGIGSFTDLgtsgaMLQMISHGLIG--ASLFFLVGATYDRTHTLMLdemggVGQKMRKMFAMWTACSLASLALPGM 393
|
250 260 270
....*....|....*....|....*....|.
gi 166851948 258 SGFMPKWLVIQEMTKNSSIIMPF--IMATLA 286
Cdd:PRK02546 394 SGFVAELMVFVGFATSDAYTLPFrvVVVFLA 424
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-327 |
3.03e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 41.09 E-value: 3.03e-05
10 20 30
....*....|....*....|....*....|....*..
gi 166851948 291 YFYMRLIYSSALTMFPSTNNMKIKWKYTNLSYSTLLP 327
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLP 37
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
49-286 |
1.57e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.42 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 49 NPRSIEAATKYFLTQATASMILFLAALTNFMESGQWTIMSfMNSLPSFLALLALIMKLGMA-------PFHFWVPEVTQG 121
Cdd:PRK06525 158 SPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSA-LSGLHGSLKYLVFLGILFAAwgksaqlPFYSWLPDAMEA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 122 -----SYLTSAAILLTWQKLAPLSILY-QIYPSINYNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIII- 194
Cdd:PRK06525 237 ptpasAYLHAASMVKVGVYIFARAIQSmGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLs 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 195 --IYEPTLMLLYLTIYII---MTLSSFMLLMGSSNTSTATLAI-----MSNKAPLIMILFMGILLSMGGLPPLSGFMPKW 264
Cdd:PRK06525 317 laILGSRLALEGSIAYIFnhaFAKSLFFLVAGALSYSCGTRLLprlrgVLKKLPLVGVGFCVAALAITGVPPFNGFFSKF 396
|
250 260
....*....|....*....|....*
gi 166851948 265 LVIQ---EMTKNSSIIMPFIMATLA 286
Cdd:PRK06525 397 PIFAagfELSVEYWILLPAMVLLLI 421
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
96-312 |
2.47e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 42.16 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 96 FLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNLLMFSGLLSIILggwgGLNQTQL 175
Cdd:MTH00091 61 YFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQ----MFLLKSY 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 176 RKILAYSSIAHMGWMAIIIIYEptlMLLYLTIYIIMTLSSFMLLMGSSNTSTatlaimsnkaplIMILFMGILLSMGGLP 255
Cdd:MTH00091 137 KNLLILSSTESFNWLILSFFFS---FFNVFFLFFYYFLLMLFLIPKFNNVNK------------LNFVSWETLLVFMNLP 201
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 166851948 256 PLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMK 312
Cdd:MTH00091 202 FSVTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNK 258
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
53-195 |
3.67e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.22 E-value: 3.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 53 IEAATKYFLTQATAS--MILFLAALTNFMESGQWTIMSFMNSLPS-------FLAL-LALIMKLGMAPFHFWVP----EV 118
Cdd:MTH00226 181 MQAAYYFFFYTLIGSvlMLLCLFSLYNIHGTTDYLTLASCSHVVSeqtqkwiFLGIfLAMAVKIPIFPFHIWLPkahvEA 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 119 TQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNL---LMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIII 195
Cdd:MTH00226 261 PVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLV 340
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-290 |
6.07e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.64 E-value: 6.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 55 AATKYFLTQATASMILFLAALTNFMESGQWTI-----MSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAA- 128
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELsplgaSAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSAl 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 129 ---ILLTWQKLAPLSILYQIY-PSINYN-LLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMG--------WMAIIII 195
Cdd:PRK08667 243 msgVMLKVAVYGLVRFLMDVLsPELWWGvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 196 YEPTLMLLYLTIYIIMTL------SSFMLLMGSSNTSTATLAI-----MSNKAPLIMILFMGILLSMGGLPPLSGFMPKW 264
Cdd:PRK08667 323 GLDTLALLALGGALFHSLnhalfkSLLFLTAGSVVHATGTRNIekmggLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260 270
....*....|....*....|....*....|
gi 166851948 265 LV----IQEMTKNSSIIMPFIMATLALLNL 290
Cdd:PRK08667 403 LLyesfFQSFSVADPLIKILLFSVLAIFAL 432
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-297 |
6.59e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 41.26 E-value: 6.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 152 NLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYII---MTLSSFMLLMGS-----S 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsIVKSALFMVSGSisyhfG 359
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 166851948 224 NTSTATLAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLI 297
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIV 433
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-267 |
7.79e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 41.09 E-value: 7.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 19 ITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYfLTQATASMILFLA-ALTNFMESGQWTIMSFMNSLPSFL 97
Cdd:PRK07234 109 AAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY-LFYSNVAMLFYLIgAVLVYQANGTFAFSGLATADPEAF 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 98 ALLA--LIMKLGMAPFHFWVPEVTQGSYLTSAAIL---LTWQKLAPLSILYQIYPSInYNLLMFSGLLSIILGGWGGLNQ 172
Cdd:PRK07234 188 ALIAlgLLVKGGIFVSGLWLPLTHSEAEPPVSALLsgvVVKAGVFPLVRCALDVPGL-DLIVRIFGVGTALLGVLFALLE 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 173 TQLRKILAYSSIAHMGWmaiiIIYEPTLMLLYLTIYIIMTLSSFmLLMGSSNTSTAT-LAIMSNKAPLIMILFMGILlSM 251
Cdd:PRK07234 267 KDLKRMLAFSTISQLGF----ILAAPLVGGLYALAHGLVKSTLF-LCAGALPSRNFTeLISQMLGIGKWIPLTMASF-SI 340
|
250
....*....|....*.
gi 166851948 252 GGLPPLSGFMPKWLVI 267
Cdd:PRK07234 341 AGFPLLAGFVSKVLTL 356
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-281 |
8.61e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 8.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 7 SIILSTLILGTLITMISSNWLM---AWMGLEINMFAIIPMIIKNHNPRSIeaatkyFLTQATASMILFLAALT-NFMESG 82
Cdd:PRK06459 75 SSLYILTILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAwAFIISG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 83 QWTIMSFMNSLPSFLALLALIMKLGMAPFHF--WVPEV-----TQGSYLTSAAILLTWQKLAPLSILYQIYPSINY--NL 153
Cdd:PRK06459 149 TTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAhgnapSNFSAILSATMTLMGVYGILKMTILTQTIPIGYfgLT 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 154 LMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWM-----AIIIIYEPT-----LMLLYLTIYIIM-TLSSFMLLMGS 222
Cdd:PRK06459 229 ILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLItsiehFSLITVILYSFAhSVAKTGLFLSS 308
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 223 SNTSTATLAIMSNKAPLIMILFMGIL-LSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFI 281
Cdd:PRK06459 309 GLQEKQSITYSKKIRNRWIELGLTLLaSSLSGLLPNIGGVASWLLLESLFMFAYVLHNVI 368
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
9.45e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.97 E-value: 9.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 107 GMAPFHFWVPEVTQGSYLTSAAILLT------WQKLAPLSILYQIYPSINYNLLMFSGLLSIILGGWGGLNQTQLRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTvvmkigLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 181 YSSIAHMGWMAI--------IIIYEPTLMLLYLT--IYIIMTLSSF--MLLMGSSNTSTAT-------LAIMSNKAPLIM 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFksVLFLGAGSVWFRTghrdiekLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 166851948 242 ILFMGILLSMGGLPPLSGFMPKWLVIQEMTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-286 |
1.25e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 40.67 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 94 PSFLALLALIM-----KLGMAPFHFWVPEVTQG-----SYLTSAaillTWQKlAPLSILYQIYPSINYN-----LLMFSG 158
Cdd:PRK12647 192 PLYLAILLLVLggaftKSAQFPFHFWLPNAMEAptpvsAYLHSA----TMVK-AGIYLLARLNPVLGGTplwqtILPLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 159 LLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYII---MTLSSFMLLMGSSNTSTAT-----L 230
Cdd:PRK12647 267 GLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVahsLYKGALFMVAGIIDHETGTrditkL 346
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 166851948 231 AIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLA 286
Cdd:PRK12647 347 GGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
91-263 |
1.71e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 91 NSLPSFLA-LLALIMKLG-MA-----PFHFWVPEVTQG----SYLTSAAILLTWQK--LAPLSILYQIYPSINyNLLMFS 157
Cdd:PRK07376 219 GAVSGWLAlLLCILVFLGpMAksaqfPLHVWLPDAMEGptpiSALIHAATMVAAGVflVARMYPVFEQFPAVM-TVIAWT 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 158 GLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIII-IYEPTLMLLYLtiyiiMTLSSF--MLLMGSSNTSTATLAIMS 234
Cdd:PRK07376 298 GAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMgCGAYSAGLFHL-----MTHAYFkaMLFLGSGSVIHGMEEVVG 372
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 166851948 235 N----------------KAPLIMILFMGILLSMGGLPPLSGFMPK 263
Cdd:PRK07376 373 HdpvlaqdmrlmgglrkYMPITAITFLIGCLAISGIPPFAGFWSK 417
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
152-300 |
2.16e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 39.83 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 152 NLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIII-IYEPTLMLLYLTIYII----MTLSSFMLLMGSSNTS 226
Cdd:MTH00151 241 SFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLgLGMPSLALFHLYTHALfkalLFLCAGSIIHSSSGTQ 320
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 166851948 227 TAT-LAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEM-TKNSSIIMPFIMATLALLNLYFYMRLIYSS 300
Cdd:MTH00151 321 DIRlLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSlMSPTSLLMVLLMFVGVGLTALYSARLSFCL 396
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
5-210 |
2.78e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 39.35 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 5 IFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPRSIEAATKYFLTQATASMILFLAALTNFMESGQ- 83
Cdd:PRK08676 103 VFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTRQa 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 84 -------WTIMSFMNSL--PSFLALLALIM------KLGMAPFHFWVPEV-TQGSYLTSAAILLTWQKLAPLSILY---- 143
Cdd:PRK08676 183 lgtgtlnWTELAAHASLlsPSVLGASFLFIfigflaKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRlsal 262
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 166851948 144 ----QIYPSINyNLLMFSGLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYII 210
Cdd:PRK08676 263 lrqsGAAEQFS-NVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
100-188 |
6.56e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.12 E-value: 6.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 100 LALIMKLGMAPFHFWVPEV-----TQGSYLTsAAILLTWQKLAPLSILYQIYPSIN---YNLLMFSGLLSIILGGWGGLN 171
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAhveapVAGSVIL-AGILLKLGGYGFLRFSWPLFPAASeyfAPLIVMLSVIAVIYGSLTTCR 295
|
90
....*....|....*..
gi 166851948 172 QTQLRKILAYSSIAHMG 188
Cdd:MTH00204 296 QVDFKRLIAYSSVAHMG 312
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
1-195 |
6.72e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 38.28 E-value: 6.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 1 MNPIIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIK-NHNPRSIEAATKYFLTQATASMILFLAAL---- 75
Cdd:MTH00150 52 NKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGwGYQPERLQAGMYMMLYTVGASLPLLLVILwmss 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 76 ----TNFMESGQWTIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEV-----TQGSYLTsAAILLtwqKLAPLSILyQIY 146
Cdd:MTH00150 132 sygsSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAhveapVAGSMIL-AGILL---KLGGYGIL-RMM 206
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 166851948 147 PSINYNLLMFSGLLsIILGGWGG-------LNQTQLRKILAYSSIAHMGWMAIIII 195
Cdd:MTH00150 207 MVFSLSSSSFSIFL-ISLSLWGGvltslicLRQSDVKSLIAYSSVGHMSLVLAGVL 261
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
96-263 |
7.62e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.20 E-value: 7.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 96 FLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYN-----LLMFSGLLSIILGGWGGL 170
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITAL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851948 171 NQTQLRKILAYSSIAHMGWMAIII-------------IYEPTLMLLYLTIYIIMTLSSF--MLLMG-------SSNTSTA 228
Cdd:PRK12646 294 KQWDLKGILAYSTISQLGMIMAMVgigggyaqhqqdaIASIYVFVLFAALFHLMNHAIFkcALFMGvgiidheAGTRDIR 373
|
170 180 190
....*....|....*....|....*....|....*
gi 166851948 229 TLAIMSNKAPLIMILFMGILLSMGGLPPLSGFMPK 263
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSK 408
|
|
| |
