|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 708.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 1 MLKIIIPTIMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 81 QNHLQYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 161 LVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 241 YGIMRITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 321 LTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLAS 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430
....*....|....*....|....*....|....*..
gi 166093120 401 FLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLM 437
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 566.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 1 MLKIIIPTIMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 81 QNHLQYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 161 LVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 241 YGIMRITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 321 LTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLAS 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430
....*....|....*....|....*....|....*..
gi 166093120 401 FLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLL 437
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 560.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 1 MLKIIIPTIMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 81 QNHLQYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 161 LVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 241 YGIMRITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 321 LTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLAS 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430
....*....|....*....|....*....|....*..
gi 166093120 401 FLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLM 437
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
5.41e-166 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 475.60 E-value: 5.41e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 1 MLKIIIPTIMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWLT-PTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 80 SQNHLQYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 160 LLVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 240 GYGIMRITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 320 GLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 166093120 400 SFLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLM 438
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-437 |
2.08e-152 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 440.53 E-value: 2.08e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 3 KIIIPTIMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWL-TPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFkWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 82 NHLQYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 162 VTILYLHGQTGTLNLPMLKLTHPTltnSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 242 GIMRITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 322 TSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASF 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|....*.
gi 166093120 402 LTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLL 433
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-437 |
6.54e-138 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 403.97 E-value: 6.54e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 1 MLKIIIPTIMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWLTPTYF-PYKDLNQWFGVDQLSSPLLVLSCWLLPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 80 SQNHLQYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 160 LLVTILYLHGQTGTLNLPMLKL-THPTLTNSWTDILSSLALLtAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKL 238
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELnWLTSLSSNSSSIWWIFCIL-AFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 239 GGYGIMR-ITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMI 317
Cdd:MTH00044 240 GGYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMI 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 318 SHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTG 397
Cdd:MTH00044 320 AHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIG 399
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 166093120 398 LASFLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00044 400 LATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLI 439
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
2.16e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 350.99 E-value: 2.16e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 1 MLKIIIPTIMLLPLTLLsppKFMWTNTTTYSLLIAALSLqWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFL---KNSWWLVQSLLFLLSFLFM-LLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 81 QNHLQYEPHPRKQTFIATLAMVqpFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 161 LVTILYLHGQTGTLNLPMLKLthptltNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 241 YGIMRITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 321 LTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLAS 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430
....*....|....*....|....*....|....*..
gi 166093120 401 FLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-437 |
2.34e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 332.19 E-value: 2.34e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 37 LSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILASQNHLQYEPHPRKqtFIATLAMVQPFLILAFSTTDLM 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSS--FSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 117 LFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWtdiLSS 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 197 LALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPFITMALWGALMTSSIC 276
Cdd:MTH00150 156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 277 LRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMA 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 357 IWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLL 436
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
.
gi 166093120 437 M 437
Cdd:MTH00150 396 L 396
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-437 |
6.54e-109 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 329.78 E-value: 6.54e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 1 MLKIIIPTiMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00014 1 MLKLIMPL-ISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 81 QNHLQYEPHPRkqTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 161 LVTILYLHGQTGTLNLPMLKLTHPTLtnsWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 241 YGIMRITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 321 LTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLAS 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430
....*....|....*....|....*....|....*..
gi 166093120 401 FLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLM 431
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-419 |
3.24e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 315.00 E-value: 3.24e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 5 IIPTIMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILASQNHl 84
Cdd:MTH00205 2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 85 qYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTI 164
Cdd:MTH00205 81 -FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 165 LYLHGQTGTLNLPMLkltHPTLTNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIM 244
Cdd:MTH00205 160 FFLNSLNFSLSMFFN---FPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 245 RITILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSS 324
Cdd:MTH00205 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 325 MLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTA 404
Cdd:MTH00205 317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
|
410
....*....|....*
gi 166093120 405 SYTLFMFLTTQRGST 419
Cdd:MTH00205 397 AYSLYLYSQSQHGKV 411
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
56-437 |
9.51e-78 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 250.38 E-value: 9.51e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 56 FGVDQLSSPLLVLSCWLLPLMILASQNHLQYEPhprKQTFIATLAMvQPFLILAFSTTDLMLFYIAFEATLIPTLILITR 135
Cdd:COG1008 78 LGVDGISLPLVLLTALLTPLAILASWNEIKKRP---KLYYALLLLL-EAGMIGVFLALDLFLFYVFWELMLIPMYFLIGI 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 136 WGNqPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILSsLALLTAFMVKAPLYGLHLW 215
Cdd:COG1008 154 WGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLF-LAFFIAFAVKVPMFPFHTW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRITI-LTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:COG1008 232 LPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALpLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 295 GLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTN 374
Cdd:COG1008 312 GFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSG 391
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166093120 375 LMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFMFLTTQRGSTPPYITTTPNSNTREHLLM 437
Cdd:COG1008 392 FVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVL 454
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-398 |
1.78e-77 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 243.37 E-value: 1.78e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 113 TDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWTD 192
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 193 ILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPFITMALWGALMT 272
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 273 SSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLA-NTNYERMHSRILMLTRGLQPI 351
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 166093120 352 LPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGL 398
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-412 |
8.42e-69 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 227.01 E-value: 8.42e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 57 GVDQLSSPLLVLSCWLLPLMILASQNHLQYephpRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 137 GnQPERLSAGIYLLFYTLISSLPLLVTILYL----HGQTGTLNLPmlKLTHPTLTNSWTDILSsLALLTAFMVKAPLYGL 212
Cdd:PRK05846 155 G-GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIA--DLLNLPLPPGVQYWLF-LAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITI-LTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLpLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 292 SHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPP 371
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 166093120 372 TTNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFMFL 412
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQ 431
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-411 |
8.83e-67 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 221.35 E-value: 8.83e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 57 GVDQLSSPLLVLSCWLLPLMILASQNHLQyepHPRKQTFIATLAMvQPFLILAFSTTDLMLFYIAFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQ---KRVKEFYALLLLL-EAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 137 GNqPERLSAGIYLLFYTLISSLPLLVTILYLHGQTG-TLNLPMLKLThpTLTNSWTDILSsLALLTAFMVKAPLYGLHLW 215
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNL--PLPFGVQTWLF-LAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRITI-LTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 295 GLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTN 374
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350
....*....|....*....|....*....|....*..
gi 166093120 375 LMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFMF 411
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
23-437 |
6.82e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 214.16 E-value: 6.82e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 23 MWTNTTTYSLLIAALSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILASQNHLQYephpRKQTFIATLAMV 102
Cdd:MTH00204 46 LWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 103 QPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLN-LPMLKL 181
Cdd:MTH00204 122 EVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDyQILLNI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 182 THPTLTNSWTDIlsslALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPF 261
Cdd:MTH00204 202 KLPLSIQKWLLV----GFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 262 ITM-----ALWGALMTSsiclRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYER 336
Cdd:MTH00204 278 IVMlsviaVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYER 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 337 MHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFMFLTTQR 416
Cdd:MTH00204 354 HHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISF 433
|
410 420
....*....|....*....|.
gi 166093120 417 GSTPPYITTTPNSNTREHLLM 437
Cdd:MTH00204 434 GGGSNYLLFSRDLNRRELLAI 454
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
56-433 |
4.14e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 196.04 E-value: 4.14e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 56 FGVDQLSSPLLVLSCWLLPLMILASQNHLQYephpRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITR 135
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 136 WGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLN---LPMLKLthptltNSWTDILSSLALLTAFMVKAPLYGL 212
Cdd:MTH00217 152 WGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDyqaLCCLKI------EKELQYFIFLGFFLSLAIKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITI-LTPPPSDYlYYPFI-TMALWGALMTSSICLRQTDLKSLIAYSS 290
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWpLLPEASEY-FSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 291 VSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALP 370
Cdd:MTH00217 305 VAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIP 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166093120 371 PTTNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFMFLTTQRGSTPPYITTTPNSNTRE 433
Cdd:MTH00217 385 LSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRRE 447
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-433 |
6.42e-56 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 193.60 E-value: 6.42e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 56 FGVDQLSSPLLVLSCWLLPLMILASQNHLQYephpRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 136 WGNQPERLSAGIYLLFYTLISSLPLLVTILYL---HGQTGTLNLPMLKLTHPTLTNSWTdilsSLALLTAFMVKAPLYGL 212
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLyniHGTTDYLTLASCSHVVSEQTQKWI----FLGIFLAMAVKIPIFPF 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITI-LTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00226 250 HIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWpILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSV 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 292 SHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPP 371
Cdd:MTH00226 330 AHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 166093120 372 TTNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFMFLTTQRGSTPPYITTTPNSNTRE 433
Cdd:MTH00226 410 SGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
56-415 |
5.52e-48 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 170.33 E-value: 5.52e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 56 FGVDQLSSPLLVLSCWLLPLMILASqnhLQYEPHPRKQTFIATLAMVQPF-LILAFSTTDLMLFYIAFEATLIPTLILIT 134
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYS---IGYMRHERRGRRFYPLFLLLLAgMNGAFLTGDLFNLFVFFEVMLLASYGLVA 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 135 rWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILSSLaLLTAFMVKAPLYGLHL 214
Cdd:COG0651 149 -LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI--TILTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVS 292
Cdd:COG0651 227 WLPDAYPAAPSPVSALLSGLLTKVGVYAILRVltLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 293 HMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPT 372
Cdd:COG0651 307 QIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 166093120 373 TNLMAELTIMTTLFN-WSPLTIALTGLASFLTASYTLFMFLTTQ 415
Cdd:COG0651 387 SGFVSKWLLLQAALEaGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
105-409 |
3.67e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 162.00 E-value: 3.67e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 105 FLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYlhgqtgtlNLPMLKLTHP 184
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 185 TLTNSWTdilSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTpppSDYLYYPFITM 264
Cdd:MTH00094 146 DFFLSWE---MFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL---NFVYNNFWIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 265 ALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILML 344
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 166093120 345 TRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLF 409
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-410 |
1.27e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 160.20 E-value: 1.27e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 52 LNQWFGVDQLSSPLLVLSCWLLPLMILASQNhLQYEPhprkQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLI 131
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 132 LITRWGNQpERLSAGIYLLFYTLISSLPLLVTILYL--HGQTGTLNLPMLKLTHPTLtnsWTDILSSLALLTAFMVKAPL 209
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALalSGDTFTFDLAELGAKSYPL---ALELLLYAGFLIAFGVKLPI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 210 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPF-----ITMALWGALMTssicLRQTDLKS 284
Cdd:PRK12561 202 FPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPAlailgVVNIIYGALNA----FAQDNVKR 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 285 LIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASL 364
Cdd:PRK12561 278 RLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSM 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 166093120 365 TNMALPPTTNLMAELTI---MTTLFNWSPL----TIALTGLASFLTASYTLFM 410
Cdd:PRK12561 358 ASLALPGMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSM 410
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
52-410 |
2.02e-38 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 145.61 E-value: 2.02e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 52 LNQWFGVDQLSSPLLVLSCWLLPLMILASQNHLQyephpRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLI 131
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 132 LITRWGNQpERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSwTDILSSLALLTAFMVKAPLYG 211
Cdd:PRK06473 146 LIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITI-LTPPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK06473 224 FHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVgLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 291 VSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGL---QPILPLMAIWWLLASLTNM 367
Cdd:PRK06473 304 IGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASA 383
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 166093120 368 ALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFM 410
Cdd:PRK06473 384 GIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLL 426
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-410 |
1.25e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 135.60 E-value: 1.25e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 45 TYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILASQNhLQYEPhprKQTFIATLAMVQPfLILAFSTTDLMLFYIAFEA 124
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAWP-VTFKP---KLFYFLMLAMYGG-QIAVFAVQDMLLFFLAWEL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 125 TLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWtDILSSLALLTAFM 204
Cdd:PRK02546 147 ELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYP-FITMALWGALMTSSICLRQTDLK 283
Cdd:PRK02546 225 VKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLK 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 284 SLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLAS 363
Cdd:PRK02546 305 RKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACS 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 166093120 364 LTNMALPPTTNLMAELTIM----TTLFNWSPLTIALTGLASF---LTASYTLFM 410
Cdd:PRK02546 385 LASLALPGMSGFVAELMVFvgfaTSDAYTLPFRVVVVFLAAVgviLTPIYLLSM 438
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
46-406 |
4.17e-32 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 127.91 E-value: 4.17e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 46 YFPYKD---LNQWFGVDQLSSPLLVLSCWLLPLMILASQNHLQyephpRKQTFIATLAMVQPFLILAFSTTDLMLFYIAF 122
Cdd:PRK07363 62 YLPWNEplgLSYSLGVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFY 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 123 EATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSwTDILSSLALLTA 202
Cdd:PRK07363 137 ELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPfiTMALWGA---LMTSSICLRQ 279
Cdd:PRK07363 215 FGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 280 TDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGL-QPI--LPLMA 356
Cdd:PRK07363 293 KDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTS 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 166093120 357 IWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTASY 406
Cdd:PRK07363 373 ALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
95-381 |
3.82e-30 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 122.36 E-value: 3.82e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 95 FIATLAMV--QP---------FLILA--------FSTTDLMLFYIAFEATLIPTLILITRWGNQpERLSAGIYLLFYTLI 155
Cdd:CHL00011 95 FITTLATLaaWPvtrnsrlfyFLMLAmysgqiglFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 156 SSLPLLVTILY--LHGQTG-TLNLPML-KLTHPTLTnswtDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLL 231
Cdd:CHL00011 174 GSIFLLIGVLGmgLYGSNEpTLNFETLaNQSYPVAL----EILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLL 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 232 AALLLKLGGYGIMRITILTPPPSDYLYYPFitMALWGALM---TSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWA 308
Cdd:CHL00011 250 AGILLKMGAYGLIRINMELLPHAHSIFSPW--LVIVGAIQiiyAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTG 327
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166093120 309 FAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTI 381
Cdd:CHL00011 328 LNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-406 |
3.76e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 110.74 E-value: 3.76e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 56 FGVDQLSSPLLVLSCWLLPLMILASQNHlqyePHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITR 135
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGY----GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 136 WGNqPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLklthPTLTNSWTDILSSLAL-LTAFMVKAPLYGLHL 214
Cdd:PRK08375 149 GGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADL----AGALAENPTVVTAFGFvLLALALKAAVFPLHT 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPFITMALWGALMT----SSICLRQTDLKSLIAYSS 290
Cdd:PRK08375 224 WLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLALLSmlvgSLAALGQDDVKRVLAYST 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 291 VSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALP 370
Cdd:PRK08375 304 VSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVP 383
|
330 340 350
....*....|....*....|....*....|....*..
gi 166093120 371 PTTNLMAELTIMTTLFN-WSPLTIALTGLASFLTASY 406
Cdd:PRK08375 384 PTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
7.76e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 95.67 E-value: 7.76e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 1 MLKIIIPTIMLLPLTLLSPPKFMWTNTTTYSLLIAALSLQWLT-PTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 166093120 80 SQNHLQYEPHPRKQTFIATLAMVQPFLILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-400 |
8.00e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 103.90 E-value: 8.00e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 58 VDQLSSPLLVLSCWLLPLMILASQNHLQYEPHPrkQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGP--EWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 138 NQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKL----------THPTLTNSWTDILSSLALLTAFMVKA 207
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLALGVALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 208 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-------TILTPPPSDYLYYPFITMALWGALMTSSICLRQT 280
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 281 DLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWL 360
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 166093120 361 LASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLAS 400
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIA 437
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
32-413 |
6.23e-22 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 98.08 E-value: 6.23e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 32 LLIAALSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILASQNHLQYEPHPRKQTfIATL----AMVQPFL- 106
Cdd:PRK06458 41 TLILALWLVFTVPDAGEIFAAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVEHGELS-PVTLrlyyGMYQLFLf 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 107 --ILAFSTTDLMLFYIAFEATLIPTLILITRWGnQPERLSAGI-YLLFYTLISSLPLLVTIL-YLHGQT----------G 172
Cdd:PRK06458 120 tmLLALTSNNLGLMWVAIEATTLSSALLVGIYR-TRASLEAAWkYIIICSVGVAFALFGTILvYANAATvmgdgemailW 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 173 TLNLPMLKLTHPTLTNswtdiLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILT-- 250
Cdd:PRK06458 199 TELLKHASLLDPTLMK-----LAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIda 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 251 PPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLA 330
Cdd:PRK06458 274 AIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFAS 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 331 NTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFM 410
Cdd:PRK06458 354 GNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVR 433
|
...
gi 166093120 411 FLT 413
Cdd:PRK06458 434 RVA 436
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-409 |
1.20e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 88.49 E-value: 1.20e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 58 VDQLSSPLLVLSCW-LLPLMILA-SQNHLQYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITR 135
Cdd:PRK12665 74 VDRLSALMLVVSSVvLLAVLVYAiGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 136 wGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTnSWTDILSSLALLTAFMVKAPLYGLHLW 215
Cdd:PRK12665 154 -GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP-SGTRTALFAVLLVAFGIKAAVFPLSFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TILTppPSDYLYypfiTMALWGALMTSSI----CLRQTDLKSLIAYSS 290
Cdd:PRK12665 232 LPDSYPTAPAPVTAVFAGLLTKVGVYAIIRThTLLF--PGGGLD----TLLMVVALLTMVVgilgAIAQSDIKRLLSFTL 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 291 VSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALP 370
Cdd:PRK12665 306 VSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIP 385
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 166093120 371 PTTNLMAELTIMTT-LFNWSPLTIALTGlASFLTASYTLF 409
Cdd:PRK12665 386 PFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-410 |
2.47e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 84.38 E-value: 2.47e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 111 STTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLtHPTLTNSW 190
Cdd:PRK08376 139 ITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAV-KMSENPTV 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 191 TDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRITIltpppsdYLYYPFITMALWGAL 270
Cdd:PRK08376 218 VAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLF-------SIYGPAINLATVGWV 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 271 MTSSICLR----------QTDLKSLIAYSSVSHMG---------LVIAATMIQTHW---AFAGAMILMISHGLTSSMLFC 328
Cdd:PRK08376 290 IIILGCLTmfvgvamavvQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYgeiALAGGIYHIVNHALYKALLFL 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 329 LANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPL--TIALTG----LASFL 402
Cdd:PRK08376 370 TAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPIlgVIAMIGsvltLASFV 449
|
....*...
gi 166093120 403 TASYTLFM 410
Cdd:PRK08376 450 KVFHTAFF 457
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-412 |
1.66e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 81.54 E-value: 1.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 89 HPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVTILYLH 168
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 169 GQTGTLNLPMLKLTHPTltnswtdilsSLALL-TAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT 247
Cdd:PRK07234 169 QANGTFAFSGLATADPE----------AFALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 248 ILTPPPSDYLYYPFITMALWGalmtSSICLRQTDLKSLIAYSSVSHMGLVIAATMIqthwafagAMILMISHGLTSSMLF 327
Cdd:PRK07234 239 LDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLF 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 328 CLANTNYERMHSRIL--MLTRGLQPILplmaiwwLLASLTNMALPPTTNLMAELTIMTTLFNWspLTIALTGLASFLTAS 405
Cdd:PRK07234 307 LCAGALPSRNFTELIsqMLGIGKWIPL-------TMASFSIAGFPLLAGFVSKVLTLKNLLPW--QAIALNLAAVGTAAS 377
|
....*..
gi 166093120 406 YTLFMFL 412
Cdd:PRK07234 378 FWKFIFL 384
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
95-386 |
6.37e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 80.16 E-value: 6.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 95 FIATLAMVqpflILAFSTTDLMLFYiafEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTL 174
Cdd:PRK08667 120 FILSMLGV----VASANTFSFLFFW---EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 175 NLPMLKLTHPTLTnswtdiLSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPS 254
Cdd:PRK08667 193 ELSPLGASAGILS------LVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPE 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 255 DYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLV---IAATMIQTHW--------AFAGAMILMISHGLTS 323
Cdd:PRK08667 267 LWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIlmgIGLYVIFGVYgldtlallALGGALFHSLNHALFK 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166093120 324 SMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLF 386
Cdd:PRK08667 347 SLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
87-413 |
1.68e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 75.57 E-value: 1.68e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 87 EPHPRKQTFIATL-----AMvqpfLILAFSTtDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLL 161
Cdd:COG1009 105 SGDPGLARFFAYLllfmaAM----LGLVLSD-NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLL 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 162 VTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAhVEAPI-------------AGS 228
Cdd:COG1009 180 LGILLLGAIAGTLNFSELLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhaatmvkAGV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 229 mllaalllklggYGIMRITILtpppsdYLYYP--FITMALWG---ALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMI 303
Cdd:COG1009 259 ------------YLLARLSPL------FALSPvwLTVVAIIGaitALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 304 QthwAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMT 383
Cdd:COG1009 321 G---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILE 397
|
330 340 350
....*....|....*....|....*....|....
gi 166093120 384 TLF---NWSPLTIALTGLASFLTASYTL-FMFLT 413
Cdd:COG1009 398 AALeagGLGPLLLAVALLGAFLTAFYSFrLFFLV 431
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-408 |
2.50e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 72.38 E-value: 2.50e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 98 TLAMVqpFLILAfstTDLMLFYIAFEATLIPTLILITRWGNQPErlSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLP 177
Cdd:PRK12650 120 MAAML--LLVLA---DDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLS 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 178 MLkLTHPtltnSWTD---ILSSLALLTAFMV--KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTP- 251
Cdd:PRK12650 193 GI-LHSD----VWAEkpgLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHd 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 252 -PPSDYLyypFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12650 268 vAVWNWL---LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 331 NTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLF-----NWSP-LTIALTGLASFLTA 404
Cdd:PRK12650 345 GVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVvLLLVGAALGAVFTF 424
|
....
gi 166093120 405 SYTL 408
Cdd:PRK12650 425 AYSA 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
94-405 |
3.12e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 71.32 E-value: 3.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 94 TFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWgNQPERLSAGIYLLFYTLISSLPLLVTILYLH----- 168
Cdd:PRK08676 103 VFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIFAFIGLIFLFsltrq 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 169 -GQTGTLNLPMLKLTHPTLTNSWTdILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT 247
Cdd:PRK08676 182 aLGTGTLNWTELAAHASLLSPSVL-GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLS 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 248 ILTPPPSDYLYYPFITMALwGALMTSSIC---LRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSS 324
Cdd:PRK08676 261 ALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKS 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 325 MLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTA 404
Cdd:PRK08676 340 GLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAA 419
|
.
gi 166093120 405 S 405
Cdd:PRK08676 420 S 420
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-411 |
5.68e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 70.57 E-value: 5.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 155 ISSLPLLVTILYLHGQTGTLNlpMLKLTHPTLTNSWTDILSSLALLT-AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAA 233
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLN--MAHIAQLAGTIDPTVAQVGLALLIfGLAVEAELFPLNAWAPDAYQAAPHPITVMFSA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 234 LLLKLGGYGIMRITILTPPPSDY--LYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAG 311
Cdd:PRK08377 247 FVVKAGLYAMARILYLMQNANGWssVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 312 AMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPpttnlmaeltimttLFN--WS 389
Cdd:PRK08377 327 GVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIP--------------LFNvfWS 392
|
250 260
....*....|....*....|..
gi 166093120 390 PLTIALTGLASFLTASYTLFMF 411
Cdd:PRK08377 393 KFRIILAGLSAGYTWPVALVLG 414
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
112-407 |
7.62e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 70.15 E-value: 7.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 112 TTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTlISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWT 191
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 192 DILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT--------ILTPPPSDYLyypFIT 263
Cdd:PRK12662 208 IQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNV---FMI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 264 MALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILM 343
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLE 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 166093120 344 LTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFN---WSPLTIALTGlaSFLTASYT 407
Cdd:PRK12662 365 DCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaWIGLVVLLVG--SGLSVIYV 429
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
104-371 |
3.61e-12 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 68.05 E-value: 3.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 104 PFLIL-------AFSTTDLMLFYIAFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNL 176
Cdd:PRK12663 112 PFILLlmagvigSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 177 PMLKLTHPTLTNSWTDILSSLALLTAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDY 256
Cdd:PRK12663 191 AHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 257 LYYPFITMALWGALMTSSI-CLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYE 335
Cdd:PRK12663 270 LLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR 349
|
250 260 270
....*....|....*....|....*....|....*.
gi 166093120 336 RMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPP 371
Cdd:PRK12663 350 LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
1.02e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.94 E-value: 1.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 110 FSTTDLMLFYIAFEATLIPTLILITRwGNQPERLSAGIYLLFyTLISSLPLLVTILYLHGQTGTLNLP-----MLKLTHP 184
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFAdisqgLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 185 TltnswTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG-IMRITILtppPSDYLYYPFIT 263
Cdd:PRK08668 193 G-----FALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfLLVLYVL---PGTKLFSEFGT 264
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 166093120 264 ----------MALWGAL---MTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLF 327
Cdd:PRK08668 265 yrgvplfnyiLAWLGNIsiiVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
116-410 |
1.32e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 66.70 E-value: 1.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 116 MLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILS 195
Cdd:PRK12646 133 ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPM 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 196 SLALLTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITILTPPpSDYLYYPFITMALWGALMTSS 274
Cdd:PRK12646 213 IFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLGL-SNMYIYIVTFVGLITMLFGSI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 275 ICLRQTDLKSLIAYSSVSHMGLVIAATMI------QTHWAFA--------GAMILMISHGLTSSMLFCLANTNYERMHSR 340
Cdd:PRK12646 291 TALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIAsiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHEAGTR 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 341 ILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPL-------TIALTGL---ASFLTASYTLFM 410
Cdd:PRK12646 371 DIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLsqfslisMIIIVFIgviASIFTFTYALYM 450
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
114-401 |
2.39e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 66.10 E-value: 2.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 114 DLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDI 193
Cdd:PRK12647 116 NLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIREHPLYL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 194 LSSLALLTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRitiLTPPPSDYLYYpFITMALWGA--- 269
Cdd:PRK12647 196 AILLLVLGGAFTKSAQFPFHFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLAR---LNPVLGGTPLW-QTILPLFGGltm 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 270 LMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQ 349
Cdd:PRK12647 271 LTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 166093120 350 PILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASF 401
Cdd:PRK12647 351 RAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
105-393 |
3.24e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 64.94 E-value: 3.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 105 FLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLthp 184
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGS--- 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 185 tltNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPFITM 264
Cdd:MTH00062 160 ---DDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 265 ALWGALMTSSICLrqtDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILML 344
Cdd:MTH00062 237 FSVFFLITACSEL---DGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 166093120 345 TRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTI 393
Cdd:MTH00062 314 LKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLL 362
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-334 |
4.25e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 64.58 E-value: 4.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 109 AFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFyTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTN 188
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 189 SWTDILSSLALL--TAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TILTPPPSDYLYYPFITMA 265
Cdd:PRK07691 203 GQTGLITVVAILflFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILA 282
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 166093120 266 LWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNY 334
Cdd:PRK07691 283 LLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMI 351
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
71-412 |
5.23e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.45 E-value: 5.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 71 WLLPLMILASQNHLQYEPHPRKQTFIATLAMVQPFLIlAFSTtDLMLFYIAFEATLIPTLILITrWGNQPERLSAGIYLL 150
Cdd:PRK06589 96 WICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLI-ALSS-DLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYL 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 151 FYTLISSLPL-LVTILYLHGQTGTLNLpmlklthptLTNSWTDILSSLALLTAF---MVKAPLYGLHLWLPKAHVEAPIA 226
Cdd:PRK06589 173 KILMISALLLfLPAVILIYTKTGNLDF---------VSGGLFSKNQSIILLLMFiygIAKTAIFPVHSWLPAAMVAHYPV 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 227 GSMLLAALLLKLGGYGIMRI-------TILTPPPSDYLYYPFItmALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIA 299
Cdd:PRK06589 244 SALLHAVIVVKTGLFCIYKIllyifglSYLQRIFAEFNWLIFI--PIVSIFYSSLKALKTDNIKKILAYSTISQLSLALL 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 300 ATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAEL 379
Cdd:PRK06589 322 SAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKF 401
|
330 340 350
....*....|....*....|....*....|....*..
gi 166093120 380 TIMTTLFN----WSPLTIALTGLASFLTASYTLFMFL 412
Cdd:PRK06589 402 LILLAASEqnqpWLSIIVMLVVIASSILSALYLLKIL 438
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
24-323 |
6.65e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 63.98 E-value: 6.65e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 24 WTNTTTYSLLIAALSLQWLTPTYFPYKDLNQWFGVDQLSSPLLVLSCWLLPLMILASQNHLQYEPHPRKQTFIATLAMVQ 103
Cdd:COG1007 34 LLAGLALLGLLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 104 PFLILAfSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGI-YLLFYTLISSLpLLVTILYLHGQTGTLNLP--MLK 180
Cdd:COG1007 114 GMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNLAgiAAA 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 181 LTHPTLTNSWTdILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPP-SDYLYY 259
Cdd:COG1007 192 LAAGGANSPLL-LLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGlAADWQL 270
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 166093120 260 PFITMA----LWGALMTssicLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTS 323
Cdd:COG1007 271 LLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
114-411 |
1.74e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 63.40 E-value: 1.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 114 DLMLFYIAFEATLIPTLILItrwGNQPERLS---AGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLklthptLTNSW 190
Cdd:PRK12644 127 NLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL------LADPP 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 191 TDILSSLA---LLTAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklggyGIMRITILTPPPSDYLYYP 260
Cdd:PRK12644 198 TGPAVSVAvvlILVGALSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA---------GIYLVARLAPGFADVPVWR 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 261 FITMALWGALMTSS--ICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMH 338
Cdd:PRK12644 268 PTVLVLGLATMLLGgwRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTG 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 339 SRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFN------WSPLTIALTGLASFLTASYTL-FMF 411
Cdd:PRK12644 348 TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLrFLW 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
95-404 |
3.68e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 62.21 E-value: 3.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 95 FIATLAMVqpflILAfstTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTL 174
Cdd:PRK06521 122 FLASMVLV----LLA---DDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSY 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 175 NLPMLKLTHPTltnswtDILSSLALLTAFM---VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITI-LT 250
Cdd:PRK06521 195 DFAAMRAAHLS------PFWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 251 PPPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAA---TMI--------QTHWAFAGAMILMISH 319
Cdd:PRK06521 269 GAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNH 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 320 GLTSSMLFCLANTNYERMHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAE------LTIMTTLFNWS---- 389
Cdd:PRK06521 349 ALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEwlllqsLLSSPGLPQWGlkla 428
|
330
....*....|....*.
gi 166093120 390 -PLTIALTGLASFLTA 404
Cdd:PRK06521 429 vPIAAAMLALTAALAA 444
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
106-401 |
1.68e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 59.58 E-value: 1.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 106 LILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGI-YLLFYTLISSLpLLVTILYLHGQTGTLNLPMLKLTHP 184
Cdd:TIGR01770 115 IFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGSLNFEDLLLFLS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 185 TLTNSWTDILSSLAL-LTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILtppPSDYLYYPFIT 263
Cdd:TIGR01770 194 NGMLNISLLLLGIVLiLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLY---ILFGFSEAWQI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 264 MALWGALMT----SSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTS----SMLFCLANTNYE 335
Cdd:TIGR01770 271 FLAIIAFLSmligNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLSLLRSYKDE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 166093120 336 RMHSriLMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFN-----WSPLTIALTGLASF 401
Cdd:TIGR01770 351 WIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKsglywLAVIAVLTSVIGAF 419
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-330 |
4.69e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 58.32 E-value: 4.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 109 AFSTTDLMLFYIAFEATLIPTLILITRwGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLTN 188
Cdd:PRK12666 125 AFLTGDLFNLFVFFEVLLAASYGLLLH-GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPA 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 189 SWTDILSSLA--LLTAFMVKAPLYGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRITILTPPPSDYLYYPFITM 264
Cdd:PRK12666 204 ADRALLEAGAalLLVVFLIKAAMWPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQD 280
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 166093120 265 ALW-GALMTSSI----CLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12666 281 WLLpGGLATLAFgaigVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
29-408 |
6.56e-09 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 58.16 E-value: 6.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 29 TYSLLIAALSLQWLT------PTYFPYKDLNQWFGVDQLS-----------SPLLVLSCWLLPLMILASQNHLQYEPH-P 90
Cdd:MTH00020 32 TSSCLIISLSWSFLIfyeilfNSSTTYIKLWRWLDSDLLTvyfglqfdglvAIMLLVVTTVSTLVHIFSTAYMRGDPHiP 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 91 RkqtFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQ 170
Cdd:MTH00020 112 R---FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 171 TGTLNLPMLkLTHPTLTNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMritILT 250
Cdd:MTH00020 189 FGSLDFSSV-FNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLL---IRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 251 PPPSDYLYYPFITMALWGAL---MTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQThwaFAGAMILMISHGLTSSMLF 327
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLF 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 328 CLANTNYERMHSRILMLTRG-LQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIA--LTGLASFLTA 404
Cdd:MTH00020 341 LSAGSVIHALSDEQDMRKMGgLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTA 420
|
....
gi 166093120 405 SYTL 408
Cdd:MTH00020 421 FYSI 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
114-327 |
4.95e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 55.29 E-value: 4.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 114 DLMLFYIAFEATLIPTLILItrWGN-QPERLSAGI-YLLFYTLiSSLPLLVTILYLHGQTGTLNLpmlklthpTLTNSWT 191
Cdd:PRK12668 114 DLLTLFVFWELMAFTSTFLV--WARgTKAAVRAGFrYLLVHVL-GGVLLLAGILLHYAETGSFAF--------GAIAGLG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 192 DILSSLALLtAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRitilTPPPSDYLYYPFITMALWGALM 271
Cdd:PRK12668 183 GTAAWLILI-GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR----AFPGTELLIYIGAAMAVYGVFF 257
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 166093120 272 TssicLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLF 327
Cdd:PRK12668 258 A----LLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
108-371 |
5.38e-08 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 54.98 E-value: 5.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 108 LAFSTTDLMLFyIAFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTlt 187
Cdd:PRK06525 129 LVYSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS-- 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 188 nswTDILSSLALLTAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITILTPPPSDYLYYP 260
Cdd:PRK06525 205 ---LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHVIGYV 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 261 FITMALWGALMTSSICLRQTDLKSLIAYSSVSHMG---LVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERM 337
Cdd:PRK06525 275 GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGymfFGLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSC 354
|
250 260 270
....*....|....*....|....*....|....
gi 166093120 338 HSRILMLTRGLQPILPLMAIWWLLASLTNMALPP 371
Cdd:PRK06525 355 GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
111-323 |
2.00e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 53.29 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 111 STTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNL-PMLKLTHPTLTNS 189
Cdd:PRK05777 121 SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFaGIAKALADGSGNS 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 190 WTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPFI------T 263
Cdd:PRK05777 201 LLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLaiiaiaS 280
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 264 MALwGALMTssicLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTS 323
Cdd:PRK05777 281 MLV-GNLAA----LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-380 |
1.33e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 50.73 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 59 DQLSSPLLVLSCWLLPLMILASQNHLQYEPHprKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGN 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPH--VPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 139 QPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLK---LTHPTLTNSWTDILSSLALLTAFMV---------- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 206 -KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMritILTPPPSDYLYYPFITMALWGAL---MTSSICLRQTD 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM---IRSFPLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 282 LKSLIAYSSVSHMGLVIaaTMIQTHWAFAGAMILMISHGLTSSMLFCLA-----NTNYERMHSRILmltRGLQPILPLMA 356
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTY 387
|
330 340
....*....|....*....|....*....
gi 166093120 357 IWWLLASLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
108-371 |
5.53e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.06 E-value: 5.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 108 LAFSTTDLMLFyIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLT 187
Cdd:PRK12649 127 MVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIE 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 188 NSWTDILSSLALLTAFM---VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRI-TILTPPPSDYLYYPFI 262
Cdd:PRK12649 206 NIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARIhPIFSGTEAWFILVSGT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 263 TMALwgALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTH----WAFAGAMILMISHGLTSSMLFCLANTNYERMH 338
Cdd:PRK12649 285 GMIT--MVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLFLVAGIVAHEAA 362
|
250 260 270
....*....|....*....|....*....|...
gi 166093120 339 SRILMLTRGLQPILPLMAIWWLLASLTNMALPP 371
Cdd:PRK12649 363 TRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
160-418 |
9.73e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 48.10 E-value: 9.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 160 LLVTILYLHGQTGTLNLPMLKLTHPTLTNSWTdILSSLALLTAFMV------KAPLYGLHLWLPKAhVEAPI-------A 226
Cdd:PRK07376 189 LLLGILGLFWATGSFDFDGIADRLSELVSSGA-VSGWLALLLCILVflgpmaKSAQFPLHVWLPDA-MEGPTpisalihA 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 227 GSMLLAalllklggyGIMRITILTPPpsdYLYYPFI--TMALWGAL---MTSSICLRQTDLKSLIAYSSVSHMGLVIAAT 301
Cdd:PRK07376 267 ATMVAA---------GVFLVARMYPV---FEQFPAVmtVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAM 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 302 MIQthwAFAGAMILMISHGLTSSMLFCLANTNYERM-----HSRILM----LTRGLQPILPLMAIWWLLASLTNMALPPT 372
Cdd:PRK07376 335 GCG---AYSAGLFHLMTHAYFKAMLFLGSGSVIHGMeevvgHDPVLAqdmrLMGGLRKYMPITAITFLIGCLAISGIPPF 411
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 166093120 373 TNLMAELTIMTTLFNWSPLTIALTGLASFLTASYTLFMFLTTQRGS 418
Cdd:PRK07376 412 AGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
115-404 |
1.60e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 47.21 E-value: 1.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 115 LMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLKLTHPTLT-NSWTDI 193
Cdd:PRK07390 142 LFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANlDPLTAT 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 194 LSSLALLTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGY---GIMRITILTPPPSDYLyypfITMALWGAL 270
Cdd:PRK07390 222 LLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWvliKLQPVLALSPVALTVL----IVIGTVTAI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 271 MTSSICLRQTDLKSLIAYSSVSHMGLV-IAATMIQTHWAFagamILMISHGLTSSMLFCLANTNYERMHSRILMLTRGLQ 349
Cdd:PRK07390 297 GASLVAIAQIDIKRALSYSTSAYLGLVfIAVGLQQPDIAL----LLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLW 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 166093120 350 PILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTA 404
Cdd:PRK07390 373 SRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTA 427
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-297 |
2.77e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 46.31 E-value: 2.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 78 LASQNHLQYEPHPRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRwGNQPERLSAGIYLLFYTLISS 157
Cdd:PRK06591 100 ITNQTILKYINNNRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIAS-GNNPKSLIGAFDYLIMGSIGA 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 158 LPLLVTILYLHGQTGTLNLPMLKLTHPTLTNSWTDILSSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLK 237
Cdd:PRK06591 179 TLILIAIGFLLSITGSLNMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTI 258
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166093120 238 LGGYGIMRIT--ILTPPPSDYLYYPFIT-MALWGALMTSSICLRQTDLKSLIAYSSVSHMGLV 297
Cdd:PRK06591 259 IGIYIIYKFTyiIIGYETIKTAITNFIRpIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
253-412 |
5.61e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.88 E-value: 5.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 253 PSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGltsSMLFCLANT 332
Cdd:MTH00144 139 DLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSG---FLFFSLWSG 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 333 NYERMHsrilMLTRGLQPILPLMAIWWLLASLtnMALPPTTNLMAELTIMTTLFNWSPLTIALTGLASFLTA-SYTLFMF 411
Cdd:MTH00144 216 DSGSMK----DLGSLKPSYKTGLSIISLLLSL--GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlFFYLSVF 289
|
.
gi 166093120 412 L 412
Cdd:MTH00144 290 F 290
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
101-398 |
5.64e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 45.02 E-value: 5.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 101 MVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHGQTGTLNLPMLK 180
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 181 LT-HPTLTNSWTDILSSLALLT-AFMVKAPLYGLHLWLPKAHVEAPiagsMLLAALLLKLGGYGIMRITILTPPPSDYLY 258
Cdd:MTH00196 81 LVlNSGQSFSSVSVPIGYLLIIvALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNILL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 259 YPFITMALWGALMTssicLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLA---NTNYE 335
Cdd:MTH00196 157 IGGLFSLFVGAIGA----LNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVYKN 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166093120 336 rmhsrILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALTGL 398
Cdd:MTH00196 233 -----LIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAV 290
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-387 |
1.91e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 43.66 E-value: 1.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 200 LTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLYYPFITMALWGALMTSSICLRQ 279
Cdd:PRK08042 187 VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALME 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 280 TDLKSLIAYSSVSHMGLVI-----AATMIQTH------WAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTRGL 348
Cdd:PRK08042 267 HNIQRLLAYHTLENIGIILlglgaGVTGIALEqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGI 346
|
170 180 190
....*....|....*....|....*....|....*....
gi 166093120 349 QPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFN 387
Cdd:PRK08042 347 GKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
99-386 |
6.03e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.08 E-value: 6.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 99 LAMVQPFLILAFST----TDLMLFYIAFEATLIPTLILITRWGNQPerlSAGIYLLFYTLISSLPLLVTILYLHGQTGTL 174
Cdd:PRK06459 74 LSSLYILTILGMAIvltsDNYLLFLAGWEIMTIPSYVAIALTKKNK---RPAFVFMAFGELSTVLILAGFAWAFIISGTT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 175 NLPMLklthptlTNSWTDILSSLAlltaFMVKAPLYGLHL--WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILT-P 251
Cdd:PRK06459 151 NFSYL-------PSPVPLILASFG----FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTqT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 252 PPSDYLYYPFITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAAT--------MIQT--HWAFAGAMILMISHGL 321
Cdd:PRK06459 220 IPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITSieHFSLITVILYSFAHSV 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 166093120 322 TSSMLFCLANtnyermHSRILMLTRGLQPILPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLF 386
Cdd:PRK06459 300 AKTGLFLSSG------LQEKQSITYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLF 358
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
90-419 |
7.82e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 41.88 E-value: 7.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 90 PRKQTFIATLAMVQPFLILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLHG 169
Cdd:MTH00208 135 PNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLI 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 170 QTGTLNLPMLkLTHPTLTNSWTDILSsLALLTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITI 248
Cdd:MTH00208 215 NFNSWNLNEI-LSLNNSNSFLINILL-FGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGvFLLIRTSP 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 249 LTPPPSDYLYYPFITMALwGALMTSSICLRQTDLKSLIAYSSVSHMGL----------VIAATMIQTHwAFAGAMILMIS 318
Cdd:MTH00208 292 LISNSPWFLSLCLILGSL-TALFAASTAISQHDIKKIIAYSTTSQLGLmvvaiglnqpNLALFHICTH-AFFKAMLFLCS 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 319 hgltSSMLFCLANTNYERMHSrilmltrGLQPILPLMAIWWLLASLTNMALP-----PTTNLMAELTImTTLFNWSPLTI 393
Cdd:MTH00208 370 ----GSIIHSLNNEQDLRKMG-------GLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEAGL-ASISNLLSIIL 437
|
330 340 350
....*....|....*....|....*....|
gi 166093120 394 ALtgLASFLTASYT----LFMFLTTQRGST 419
Cdd:MTH00208 438 AL--IATLLTAVYSfriiFFCFLNNPSFSP 465
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
9.41e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 41.56 E-value: 9.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 262 ITMALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRI 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 166093120 342 LMLTRGLQPILPLMAIWWLLASLTNMALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
107-396 |
9.81e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 37.84 E-value: 9.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 107 ILAFSTTDLMLFYIAFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVTILYLhgqtgtlnlpmlklthptL 186
Cdd:MTH00011 20 LMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMW------------------S 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 187 TNSWTDILSSLALLTAFMVKAPLYGLHLWLPkaHVEAPIAGSMLLAALLLKLGGYGIMRITILTPPPSDYLyypfITMAL 266
Cdd:MTH00011 82 FPSLLKNITALMLLVSLMLKLGMAPCHFWFP--SVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMM----TSMAA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166093120 267 WGALMTSSICLRQTDLKSLIAYSSVSHMGLViaaTMIQTHWAFAGAMILMISHGLTSSMLFCLANTNYERMHSRILMLTR 346
Cdd:MTH00011 156 MSALAGGLGGMNQTQLRPLLAYSSIGHMGWM---TMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSM 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 166093120 347 GlqpilPLMAIWWLLASLTNMALPPTTNLMAELTIMTTLFNWSPLTIALT 396
Cdd:MTH00011 233 S-----QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV 277
|
|
| |
