|
Name |
Accession |
Description |
Interval |
E-value |
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1-1145 |
0e+00 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 1677.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 1 MGKLIRMGAQERRLLWPKRLHWRRLLFLLGILIMGSTYQCLRSPRGLPSLWAAVSSQHPVKLASRDLSNNEMMMVSSDPP 80
Cdd:TIGR00927 1 MGKLIRMGTQERRLLRPKRLHWSRLLFLLGMLIIGSTYQHLRRPQGLPSLWAAVSSQQPIKLASRDLSNDEMMMVSSDPP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 81 KSSSEMEVETWAPQATVGRDGTTPGVTMENTPSIPRRIANVIPATPKSSDSPAAARTEKVKEDTPATPSGALNHYPPTSG 160
Cdd:TIGR00927 81 KSSSEMEGEMLAPQATVGRDEATPSIAMENTPSPPRRTAKITPTTPKNNYSPTAAGTERVKEDTPATPSRALNHYISTSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 161 RPVVNNYTPATRrGEVKSYRPTQARGKVRKYTPSPLGRMVNSYAPSTFMTMTRSHGITPRATVKDSEIMTTNKILETNPS 240
Cdd:TIGR00927 161 RQRVKSYTPKPR-GEVKSSSPTQTREKVRKYTPSPLGRMVNSYAPSTFMTMPRSHGITPRTTVKDSEITATYKMLETNPS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 241 KRVLGETTPTPLKGVTDNALPFLINDLETDILTSPRNVAEEKTLTTTRRVDSNSSTNHRGLVGKNSLTTPQGTVLEHTAA 320
Cdd:TIGR00927 240 KRTAGKTTPTPLKGMTDNTPTFLTREVETDLLTSPRSVVEKNTLTTPRRVESNSSTNHWGLVGKNNLTTPQGTVLEHTPA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 321 TSEGQVAVSITT-----ETKASTAAWKARNPSSRTSAPTVGISSATFWGLVKNPSPAPTTPATPRVRASPTTQVHHCVVV 395
Cdd:TIGR00927 320 TSEGQVTISIMTgsspaETKASTAAWKIRNPLSRTSAPAVRIASATFRGLEKNPSTAPSTPATPRVRAVLTTQVHHCVVV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 396 EPVPVSSTVPSPSLTTTGMPEAPSP--SVLPSGQPDLHPKAEYPRDLFSVKERRQGWVVLHIFGMLYVFVALAIVCDEYF 473
Cdd:TIGR00927 400 KPAPAVPTTPSPSLTTALFPEAPSPspSALPPGQPDLHPKAEYPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYF 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 474 VPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWP 553
Cdd:TIGR00927 480 VPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWP 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 554 LFRDITFYILDLMMLILFFLDSLIVWWESLLLLLAYALYVFTMKWNKQLELWVKKQLSKRPVARVMALGDLSKlgdgtvv 633
Cdd:TIGR00927 560 LFRDVSFYILDLMMLILFFLDSLIAWWESLLLLLAYALYVFTMKWNKQIELWVKEQLSRRPVAKVMALGDLSK------- 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 634 vdeqqdnkklklasvltqgsslaslhnstirstiyqlilrsldtlgearpskdkeeeslnqEAKAKPQAKAESKPEEEEP 713
Cdd:TIGR00927 633 -------------------------------------------------------------GDVAEAEHTGERTGEEGER 651
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 714 AklpevTVTPAPAPDVKGDQEEDPGSQGDVAEAESTGE-----RTDNEVKTPGEGENGEQSGGEARPEGEGEEKGENESE 788
Cdd:TIGR00927 652 P-----TEAEGENGEESGGEAEQEGETETKGENESEGEipaerKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGT 726
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 789 GD---IQAERKGE---NESEGDIQA----ERKGENEsEGDIQAERKGD---DEGEGEIQAGENGEMKGDEGDLQA----- 850
Cdd:TIGR00927 727 EDegeIETGEEGEeveDEGEGEAEGkhevETEGDRK-ETEHEGETEAEgkeDEDEGEIQAGEDGEMKGDEGAEGKveheg 805
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 851 ERKGDDEGEGEIQAGEDGEMKGDEGETGEQELNAENQDEAKEDEKGIdgeeEGDGGESEDEEEEEEEGEEEEEEEGEEEE 930
Cdd:TIGR00927 806 ETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGV----DGGGGSDGGDSEEEEEEEEEEEEEEEEEE 881
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 931 EEQEEEEEEEEPLSLEWPETRQKQAIYLFLLPIVFPLWLTVPDVRRLEARKFFVITFLGSIMWIAMFSYLMVWWAHQVGE 1010
Cdd:TIGR00927 882 EEEEEEEENEEPLSLEWPETRQKQAIYLFLLPIVFPLWLTVPDVRRQEARKFFVITFLGSIMWIAMFSYLMVWWAHQVGE 961
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 1011 TIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWMLFSFINGLQPVPVSSNGLFCA 1090
Cdd:TIGR00927 962 TIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLLFSLINGLQPVPVSSNGLFCA 1041
|
1130 1140 1150 1160 1170
....*....|....*....|....*....|....*....|....*....|....*
gi 1655707511 1091 IVLLFLMLLFVISSIALCKWRMNKILGFTMFLLYFVFLIISVMLEDRIISCPVSV 1145
Cdd:TIGR00927 1042 IVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLEDRIISCPVSV 1096
|
|
| TIGR00367 |
TIGR00367 |
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ... |
453-607 |
2.66e-42 |
|
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]
Pssm-ID: 273039 [Multi-domain] Cd Length: 307 Bit Score: 157.10 E-value: 2.66e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 453 LHIFGMLYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNI 532
Cdd:TIGR00367 1 LLLIGYLILGLILLIYGADLFVKSSVRIARHLGISPLIIGVTVVAIGTSLPELFTSLIASLMGQPDIGVGNVIGSNIFNI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1655707511 533 LFVIGTCALFSrEILNLTWWpLFRDITFYILDLMMLILFFLDSLivwWESLLLLLAYALYVFTMKWNKQLELWVK 607
Cdd:TIGR00367 81 LLILGLSAIFS-PIIVDKDW-LRRDILFYLLVSILLLFFGLDGQ---ISRIDGVVLLILYIVYLLFLVKNERWVK 150
|
|
| TIGR00367 |
TIGR00367 |
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ... |
955-1127 |
7.09e-40 |
|
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]
Pssm-ID: 273039 [Multi-domain] Cd Length: 307 Bit Score: 150.17 E-value: 7.09e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 955 AIYLFLLPIVFPLWL------------TVPDVRRLEARKFFVITFL---GSIMWIAMFSYLMVWWAHQVGETIGISEEIM 1019
Cdd:TIGR00367 128 GVVLLILYIVYLLFLvknerwvkydtyTEENLDENNRRPQIFFSLVlliIGLIGLVVGSRLLVDGAVKIAEILGISEKII 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 1020 GLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWmLFSFINgLQPVPVSSNGLFCAIVLLFLMLL 1099
Cdd:TIGR00367 208 GLTLLAIGTSLPELVVSLAAARKGLGDIAVGNVIGSNIFNILVGLGVPS-LFMPIP-VEPLAYNLDAPVMVIVTLLLMLF 285
|
170 180
....*....|....*....|....*...
gi 1655707511 1100 FVIsSIALCKWrmnkiLGFTMFLLYFVF 1127
Cdd:TIGR00367 286 FKT-SMKLGRW-----EGILLLALYIAY 307
|
|
| Na_Ca_ex |
pfam01699 |
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral ... |
982-1133 |
2.79e-30 |
|
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3.
Pssm-ID: 426387 [Multi-domain] Cd Length: 149 Bit Score: 116.93 E-value: 2.79e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 982 FFVITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDIT 1061
Cdd:pfam01699 1 LSLLLFILGLLLISVAADLLVDSAEVLARVLGISGTVLGLTILALGTSLPELVSSIIAALRGEPDLALGNVIGSNIFNIL 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1655707511 1062 VGLPLPWMLFSFINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIalcKWRMNKILGFTMFLLYFVFLIISVM 1133
Cdd:pfam01699 81 LVLGLSALIGPVKVDSLLLKLDLGVLLLVALLLLLLLLLLLLPL---FGRLSRFEGLVLLLLYIVYLVFQIV 149
|
|
| Na_Ca_ex |
pfam01699 |
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral ... |
454-582 |
1.93e-29 |
|
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3.
Pssm-ID: 426387 [Multi-domain] Cd Length: 149 Bit Score: 114.62 E-value: 1.93e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 454 HIFGMLYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNIL 533
Cdd:pfam01699 1 LSLLLFILGLLLISVAADLLVDSAEVLARVLGISGTVLGLTILALGTSLPELVSSIIAALRGEPDLALGNVIGSNIFNIL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1655707511 534 FVIGTCALFS-----REILNLTwWPLFRDITFYILDLMMLILFFLDSLIVWWES 582
Cdd:pfam01699 81 LVLGLSALIGpvkvdSLLLKLD-LGVLLLVALLLLLLLLLLLLPLFGRLSRFEG 133
|
|
| ECM27 |
COG0530 |
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; |
971-1130 |
7.28e-24 |
|
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
Pssm-ID: 440296 [Multi-domain] Cd Length: 293 Bit Score: 103.29 E-value: 7.28e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 971 VPDVRRLEARKFFVITFLGSIMwIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVS 1050
Cdd:COG0530 142 LEEKPKMSLWKALLLLVLGLAL-LVVGARLLVDGAVEIARALGVSELVIGLTIVAIGTSLPELATSIVAARKGEDDLAVG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 1051 SSVGSNIFDITVGLPLPWMlfsfingLQPVPVSSNGLFcaivllFLMLLFVISSIAL-----CKWRMNKILGFTMFLLYF 1125
Cdd:COG0530 221 NIIGSNIFNILLVLGIGAL-------ITPIPVDPAVLS------FDLPVMLAATLLLlgllrTGGRIGRWEGLLLLALYL 287
|
....*
gi 1655707511 1126 VFLII 1130
Cdd:COG0530 288 AYLAL 292
|
|
| ECM27 |
COG0530 |
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; |
471-581 |
1.08e-22 |
|
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
Pssm-ID: 440296 [Multi-domain] Cd Length: 293 Bit Score: 99.82 E-value: 1.08e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 471 EYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNILFVIGTCALFSReiLNLT 550
Cdd:COG0530 2 DLLVRGADALARRLGISPLVIGLTIVAFGTSLPELAVSVTAALDGSPDIAVGNVVGSNIANILLILGLAALIRP--LAVD 79
|
90 100 110
....*....|....*....|....*....|.
gi 1655707511 551 WWPLFRDITFYILDLMMLILFFLDSLIVWWE 581
Cdd:COG0530 80 RRVLRRDLPFLLLASLLLLALLLDGTLSRID 110
|
|
| ECM27 |
COG0530 |
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; |
458-582 |
1.22e-16 |
|
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
Pssm-ID: 440296 [Multi-domain] Cd Length: 293 Bit Score: 81.72 E-value: 1.22e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 458 MLYVFVALA--IVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNILFV 535
Cdd:COG0530 154 LLLLVLGLAllVVGARLLVDGAVEIARALGVSELVIGLTIVAIGTSLPELATSIVAARKGEDDLAVGNIIGSNIFNILLV 233
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1655707511 536 IGTCALFSReiLNLTWWPLFRDITFYIL-DLMMLILFFLDSLIVWWES 582
Cdd:COG0530 234 LGIGALITP--IPVDPAVLSFDLPVMLAaTLLLLGLLRTGGRIGRWEG 279
|
|
| PRK10734 |
PRK10734 |
putative calcium/sodium:proton antiporter; Provisional |
1013-1070 |
2.72e-13 |
|
putative calcium/sodium:proton antiporter; Provisional
Pssm-ID: 182684 [Multi-domain] Cd Length: 325 Bit Score: 72.37 E-value: 2.72e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1655707511 1013 GISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWML 1070
Cdd:PRK10734 205 AISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALI 262
|
|
| ECM27 |
COG0530 |
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; |
1005-1137 |
7.09e-13 |
|
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
Pssm-ID: 440296 [Multi-domain] Cd Length: 293 Bit Score: 70.55 E-value: 7.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 1005 AHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWMLFsfinglqPVPVSS 1084
Cdd:COG0530 8 ADALARRLGISPLVIGLTIVAFGTSLPELAVSVTAALDGSPDIAVGNVVGSNIANILLILGLAALIR-------PLAVDR 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1655707511 1085 NGLfcaivlLFLMLLFVISSIALC----KWRMNKILGFTMFLLYFVFLIISVMLEDR 1137
Cdd:COG0530 81 RVL------RRDLPFLLLASLLLLalllDGTLSRIDGVILLLLYVLYLYYLIRRARK 131
|
|
| TIGR00367 |
TIGR00367 |
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ... |
443-572 |
2.58e-12 |
|
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]
Pssm-ID: 273039 [Multi-domain] Cd Length: 307 Bit Score: 69.27 E-value: 2.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 443 VKERRQGWVVLHIFGMLYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIG 522
Cdd:TIGR00367 159 LDENNRRPQIFFSLVLLIIGLIGLVVGSRLLVDGAVKIAEILGISEKIIGLTLLAIGTSLPELVVSLAAARKGLGDIAVG 238
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1655707511 523 TIVGSAVFNILFVIGTCALFSR-EILNLTwwpLFRDITFYILDLMMLILFF 572
Cdd:TIGR00367 239 NVIGSNIFNILVGLGVPSLFMPiPVEPLA---YNLDAPVMVIVTLLLMLFF 286
|
|
| TIGR00367 |
TIGR00367 |
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ... |
984-1135 |
5.79e-11 |
|
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]
Pssm-ID: 273039 [Multi-domain] Cd Length: 307 Bit Score: 65.04 E-value: 5.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 984 VITFLGSIMWIAMFSY---LMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDI 1060
Cdd:TIGR00367 1 LLLIGYLILGLILLIYgadLFVKSSVRIARHLGISPLIIGVTVVAIGTSLPELFTSLIASLMGQPDIGVGNVIGSNIFNI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1655707511 1061 TVGLPLPwMLFSfinglqPVPVSSNGLFcaIVLLFLMLLFVISSIALCKWRMNKILGFTMFLLYFVFLIISVMLE 1135
Cdd:TIGR00367 81 LLILGLS-AIFS------PIIVDKDWLR--RDILFYLLVSILLLFFGLDGQISRIDGVVLLILYIVYLLFLVKNE 146
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
709-896 |
2.72e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 63.84 E-value: 2.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 709 EEEEPAKLPEVTVTPAPAPdvkgdQEEDPGSQGDVAEAESTGERTDNEVKTPGEGEngeqsggearpegegeekgenese 788
Cdd:PHA03169 28 GTREQAGRRRGTAARAAKP-----APPAPTTSGPQVRAVAEQGHRQTESDTETAEE------------------------ 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 789 gdiqaERKGENESEGDIQAERKGENESEGDiQAERKGDDEGEGEIQAGENGEMKGDEGDLQAERKGDDEGE-GEIQAGED 867
Cdd:PHA03169 79 -----SRHGEKEERGQGGPSGSGSESVGSP-TPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHpGPHEPAPP 152
|
170 180
....*....|....*....|....*....
gi 1655707511 868 GEMKGDEGETGEQELNAENQDEAKEDEKG 896
Cdd:PHA03169 153 ESHNPSPNQQPSSFLQPSHEDSPEEPEPP 181
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
679-895 |
9.97e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 61.91 E-value: 9.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 679 GEARPSKDKEEESLNQEAKAKPQAKAESKPE-----EEEPAKLPEVTVTpapAPDVKGDQEEDPGSQGDVAEAESTGERT 753
Cdd:PHA03169 27 GGTREQAGRRRGTAARAAKPAPPAPTTSGPQvravaEQGHRQTESDTET---AEESRHGEKEERGQGGPSGSGSESVGSP 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 754 DnevktPGEGENGEQ--SGGEARPEGEGEEKGENESEGDIQAERKGENESEGDIQA--ERKGENESEGDIQAERKGDDEG 829
Cdd:PHA03169 104 T-----PSPSGSAEElaSGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPEShnPSPNQQPSSFLQPSHEDSPEEP 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1655707511 830 EGeiQAGENGEMKGDEGDLQAERKGDDEGEGEIQAGEDGEMKGDEGETGEQELNAENQDEAKEDEK 895
Cdd:PHA03169 179 EP--PTSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPER 242
|
|
| caca |
TIGR00845 |
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ... |
451-613 |
1.49e-09 |
|
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]
Pssm-ID: 273296 [Multi-domain] Cd Length: 928 Bit Score: 62.50 E-value: 1.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 451 VVLHIFGMLYVFVALAIVCDEyFVPALGVITDK-----------------LQI-SEDVAGATFMAAGGSAPELFTSLIGI 512
Cdd:TIGR00845 75 ATVYFVAMVYMFLGVSIIADR-FMASIEVITSQekeitikkpngettvttVRIwNETVSNLTLMALGSSAPEILLSVIEV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 513 ----FIShSNVGIGTIVGSAVFNILFVIGTCALF-----SREILNL------TWWPLFRDITFYildlmMLILFFLDSLI 577
Cdd:TIGR00845 154 cghnFEA-GDLGPSTIVGSAAFNMFIIIAICVYVipdgeTRKIKHLrvffvtAAWSVFAYVWLY-----LILAVFSPGVV 227
|
170 180 190
....*....|....*....|....*....|....*.
gi 1655707511 578 VWWESLLLLLAYALYVFTmKWNKQLELWVKKQLSKR 613
Cdd:TIGR00845 228 EVWEGLLTFFFFPLCVVF-AWVADRRLLFYKYVYKR 262
|
|
| PRK10734 |
PRK10734 |
putative calcium/sodium:proton antiporter; Provisional |
479-543 |
4.74e-08 |
|
putative calcium/sodium:proton antiporter; Provisional
Pssm-ID: 182684 [Multi-domain] Cd Length: 325 Bit Score: 56.19 E-value: 4.74e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1655707511 479 VITDKLQISEDVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNILFVIGTCALFS 543
Cdd:PRK10734 199 VLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALIS 263
|
|
| PRK10734 |
PRK10734 |
putative calcium/sodium:proton antiporter; Provisional |
1001-1060 |
3.70e-07 |
|
putative calcium/sodium:proton antiporter; Provisional
Pssm-ID: 182684 [Multi-domain] Cd Length: 325 Bit Score: 53.50 E-value: 3.70e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 1001 MVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDI 1060
Cdd:PRK10734 22 LVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNI 81
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
679-894 |
1.32e-06 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 52.60 E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 679 GEARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEVT---VTPAPAPDVKGDQEEDPGSQGDVAEAESTGERTDN 755
Cdd:PRK12678 64 AAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAApaaRAAAAAAAEAASAPEAAQARERRERGEAARRGAAR 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 756 EVKTPGEGENGEQSGGEARPEGEGEEKGENESEGDIQAERKGENESEGDIQAERKGENESEGDIQAERKGDDEGEGEIQA 835
Cdd:PRK12678 144 KAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGDRREERGRRDG 223
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1655707511 836 GENGEMKGDEGDLQAERKGDDEGEGEIQAGEDGEMKGDEGETGEQ--ELNAENQDEAKEDE 894
Cdd:PRK12678 224 GDRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRRGRRFRDrdRRGRRGGDGGNERE 284
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
676-894 |
2.08e-06 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 52.32 E-value: 2.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 676 DTLGEARPSKD-KEEESLNQEAKAKPQAKAESKPEEEEPAKLPEVTVTPAPAPDVKGDQEEDP--GSQGDVAEAESTGER 752
Cdd:COG5271 497 EEDAEAEADSDeLTAEETSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPeaTAEEDEPDEAEAETE 576
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 753 TDNEVKTPGEGENGEQSGGEARPEGEGEEKGENESEGDIQAERKGENE---SEGDIQAERKGENESEGDIQAERKGDDEG 829
Cdd:COG5271 577 DATENADADETEESADESEEAEASEDEAAEEEEADDDEADADADGAADeeeTEEEAAEDEAAEPETDASEAADEDADAET 656
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1655707511 830 EGEIQAGENGEMKGDEGDLqAERKGDDEGEGEIQAGEDgemkgDEGETGEQELNAENQDEAKEDE 894
Cdd:COG5271 657 EAEASADESEEEAEDESET-SSEDAEEDADAAAAEASD-----DEEETEEADEDAETASEEADAE 715
|
|
| PLN03151 |
PLN03151 |
cation/calcium exchanger; Provisional |
987-1132 |
2.37e-06 |
|
cation/calcium exchanger; Provisional
Pssm-ID: 215604 [Multi-domain] Cd Length: 650 Bit Score: 51.69 E-value: 2.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 987 FLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGlGD---MAVSSSVGSNIFDITVG 1063
Cdd:PLN03151 489 FIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNG-GDgvqIAMSGCYAGPMFNTLVG 567
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1655707511 1064 LPLPwMLF---SFINGLQPVPvSSNGLFCAIVLLFLMLLFVISSIALCKWRMNKILGFTMFLLYFVFLIISV 1132
Cdd:PLN03151 568 LGMS-MLLgawSKSPESYMLP-EDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRV 637
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
679-894 |
2.40e-05 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 48.36 E-value: 2.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 679 GEARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEVTVT-PAPAPDVKGDQEEDPGSQGDVAEAESTGERTDNE- 756
Cdd:PRK12678 77 ARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASaPEAAQARERRERGEAARRGAARKAGEGGEQPATEa 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 757 ----VKTPGEGENGEQSGGEARPEGEGEEKGENESEGDIQAERKGENESEGDIQAERKGENESEGDI-----QAERKGDD 827
Cdd:PRK12678 157 radaAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGDRREERGRRDGgdrrgRRRRRDRR 236
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1655707511 828 EGEGEIQAGENGEMKGDEGDLQAERKGDDegegeiqaGEDGEMKGDEGETGEQELNAENqdeaKEDE 894
Cdd:PRK12678 237 DARGDDNREDRGDRDGDDGEGRGGRRGRR--------FRDRDRRGRRGGDGGNEREPEL----REDD 291
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
80-428 |
4.62e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 47.26 E-value: 4.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 80 PKSSSEMEVETWAP--QATVGRDGTTPGVTMENTPSIPR----RIANVIPATPKSSDSPAAARTekvkedTPATPSG--A 151
Cdd:pfam17823 66 APAPVTLTKGTSAAhlNSTEVTAEHTPHGTDLSEPATREgaadGAASRALAAAASSSPSSAAQS------LPAAIAAlpS 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 152 LNHYPPTSGRPVVNNyTPATRRGEVKSYRPTQARGKVRKYTPSPLGRMVNSYAPSTFMTMTRShgiTPRATVKDSEIMTT 231
Cdd:pfam17823 140 EAFSAPRAAACRANA-SAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASS---APATLTPARGISTA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 232 nkiletnpskrvlGETTPTPLKGVTDNALPflindletDILTSPRNVAEEKTLTTTRRVdsnsstnhrglvgkNSLTTPQ 311
Cdd:pfam17823 216 -------------ATATGHPAAGTALAAVG--------NSSPAAGTVTAAVGTVTPAAL--------------ATLAAAA 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 312 GTVlehtaATSEGQVAVSITTETKASTAAWKARNPSSRTSAPTVG------ISSATFWGLVKNPSPAPT--------TPA 377
Cdd:pfam17823 261 GTV-----ASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAPMGaqaqgpIIQVSTDQPVHNTAGEPTpspsnttlEPN 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1655707511 378 TPRVRASPT-TQVHHCVVVEPVPVSSTVPSPSLTTTGMPEAPSPSVLPSGQP 428
Cdd:pfam17823 336 TPKSVASTNlAVVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLL 387
|
|
| CobT2 |
COG4547 |
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; ... |
821-896 |
9.11e-05 |
|
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; Cobalamin biosynthesis cobaltochelatase CobT subunit is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 443611 [Multi-domain] Cd Length: 608 Bit Score: 46.71 E-value: 9.11e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1655707511 821 AERKGDDEGEGEiqaGENGEMKGDEGDLQAERKGDDEGEGEIQAGEDGEMKGDEGETGEQELNAENQDEAKEDEKG 896
Cdd:COG4547 208 AEELGEDEDEED---EDDEDDSGEQEEDEEDGEDEDEESDEGAEAEDAEASGDDAEEGESEAAEAESDEMAEEAEG 280
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
192-422 |
2.26e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 45.29 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 192 TPSPLGRMVNSYAPS-TFMTMTRSHGITPRATV----KDSEIMTTNKILETNPSKrvlgETTPTPLKGVTDNALPFLIND 266
Cdd:pfam05109 372 TPSGCENISGAFASNrTFDITVSGLGTAPKTLIitrtATNATTTTHKVIFSKAPE----STTTSPTLNTTGFAAPNTTTG 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 267 LETDILTSPRNVAEEKTLTTTRRVDSNSSTNHRGLVGKNSLT---TPQGTVLEHTAATSEGQVAVSITTETKASTAAWKA 343
Cdd:pfam05109 448 LPSSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTpspSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAV 527
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1655707511 344 RNPSSRTSAPTVGISSATfwGLVKNPSPAPTTPaTPRVrASPTTQVhhcvvvEPVPVSSTVPSpSLTTTGMPEAPSPSV 422
Cdd:pfam05109 528 TTPTPNATSPTLGKTSPT--SAVTTPTPNATSP-TPAV-TTPTPNA------TIPTLGKTSPT-SAVTTPTPNATSPTV 595
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
76-438 |
2.78e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 76 SSDPPKSSSEMEVetwAPQATVGRDGTTPGVTMENTPSIPRRIANVIPATPKSSDSPAAARTEKvkedTPATPSGalnhy 155
Cdd:PHA03247 2698 LADPPPPPPTPEP---APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPA----RPPTTAG----- 2765
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 156 PPTSGRPVVNNYTPATRrgevkSYRPTQARGKV-RKYTPSPlgrmvNSYAPSTFMTMTRSHGITPRATvkdseimttnki 234
Cdd:PHA03247 2766 PPAPAPPAAPAAGPPRR-----LTRPAVASLSEsRESLPSP-----WDPADPPAAVLAPAAALPPAAS------------ 2823
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 235 letnPSKRVLGETTPTPLKGVTDNALPflindletdiltsprnvaeektltttrrvdsnsstnhrglvgkNSLTTPQGTV 314
Cdd:PHA03247 2824 ----PAGPLPPPTSAQPTAPPPPPGPP-------------------------------------------PPSLPLGGSV 2856
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 315 lehtaaTSEGQVAVSITTETKASTAAWKARNPSSRTSAPTVGISSATFwglvKNPSPAPTTPATPRVRASPTTQvhhcvv 394
Cdd:PHA03247 2857 ------APGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESF----ALPPDQPERPPQPQAPPPPQPQ------ 2920
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1655707511 395 vePVPVSSTVPSPSLTTTGMPEAP-SPSVLPSGQPDLHPKAEYPR 438
Cdd:PHA03247 2921 --PQPPPPPQPQPPPPPPPRPQPPlAPTTDPAGAGEPSGAVPQPW 2963
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
676-893 |
4.83e-04 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 44.62 E-value: 4.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 676 DTLGEARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPaklPEVTVTPAPAPDVKGDQEEDPGSQGDVAEAESTGERTDN 755
Cdd:COG5271 273 EATDDADGLEAAEDDALDAELTAAQAADPESDDDADDS---TLAALEGAAEDTEIATADELAAADDEDDDDSAAEDAAEE 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 756 EVKTPGEGENGEQSGGEARPEGEGEEKGENESEGDIQAErkgENESEGDIQAERKGENESEGDIQAERKGDDEGEGEIQA 835
Cdd:COG5271 350 AATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEA---DAAADDSADDEEASADGGTSPTSDTDEEEEEADEDASA 426
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1655707511 836 GENGEMKGDEGDLQAERKGDDEGEGEIQAGEDGEMKGDEGETGEQELNAENQDEAKED 893
Cdd:COG5271 427 GETEDESTDVTSAEDDIATDEEADSLADEEEEAEAELDTEEDTESAEEDADGDEATDE 484
|
|
| tolA_full |
TIGR02794 |
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ... |
680-896 |
6.97e-04 |
|
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]
Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 43.30 E-value: 6.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 680 EARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEvtvtPAPAPDVKGDQEEDpgsqgdvAEAESTGERTDNEVKT 759
Cdd:TIGR02794 58 QKKPAAKKEQERQKKLEQQAEEAEKQRAAEQARQKELEQ----RAAAEKAAKQAEQA-------AKQAEEKQKQAEEAKA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 760 PGEGENGEQSGGEARPEGEGeekgenesegdiQAERKGENESEGDIQAERKGE-NESEGDIQAERKGDDEGEGEIQAGE- 837
Cdd:TIGR02794 127 KQAAEAKAKAEAEAERKAKE------------EAAKQAEEEAKAKAAAEAKKKaEEAKKKAEAEAKAKAEAEAKAKAEEa 194
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1655707511 838 --NGEMKGDEGDLQAERKgdDEGEGEIQAGEDGEMKGDEGETG-----EQELNAENQDEAKEDEKG 896
Cdd:TIGR02794 195 kaKAEAAKAKAAAEAAAK--AEAEAAAAAAAEAERKADEAELGdifglASGSNAEKQGGARGAAAG 258
|
|
| PLN03151 |
PLN03151 |
cation/calcium exchanger; Provisional |
449-573 |
7.64e-04 |
|
cation/calcium exchanger; Provisional
Pssm-ID: 215604 [Multi-domain] Cd Length: 650 Bit Score: 43.60 E-value: 7.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 449 GWVVLHIFgMLYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSlIGIFISHS--NVGIGTIVG 526
Cdd:PLN03151 139 GYAVLGVW-LVALFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFAS-IAAFVGKDagEVGLNSVLG 216
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1655707511 527 SAVFNILFVIGTCAL-FSREILNLTWWPLFRDITFYILDLMMLILFFL 573
Cdd:PLN03151 217 GAVFVTCVVVGIVSLcVADKEVQIDKRCFIRDLCFFLFTLVSLLVILM 264
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
680-895 |
8.16e-04 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 43.85 E-value: 8.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 680 EARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPevTVTPAPAPDVKGDQEEDPGSQGDVAEAEStgertDNEVKT 759
Cdd:COG5271 440 EDDIATDEEADSLADEEEEAEAELDTEEDTESAEEDAD--GDEATDEDDASDDGDEEEAEEDAEAEADS-----DELTAE 512
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 760 PGEGENGEQSGGEARPEGEG-------EEKGENESEGDIQAERKGENESEGDIQAERKGENESEGDiQAERKGDDEGEGE 832
Cdd:COG5271 513 ETSADDGADTDAAADPEDSDedaledeTEGEENAPGSDQDADETDEPEATAEEDEPDEAEAETEDA-TENADADETEESA 591
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1655707511 833 IQAGENGEMkGDEGDLQAERKGD----------DEGEGEIQAGEDGEmkgDEGETGEQELNAENQDEAKEDEK 895
Cdd:COG5271 592 DESEEAEAS-EDEAAEEEEADDDeadadadgaaDEEETEEEAAEDEA---AEPETDASEAADEDADAETEAEA 660
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
676-911 |
1.36e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 43.08 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 676 DTLGEARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEVTVTPAPAPDVKGDQEEDPGSqgdvAEAESTGERTDN 755
Cdd:COG5271 337 DDDDSAAEDAAEEAATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEE----ASADGGTSPTSD 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 756 EVKTPGEGENGEQSGGEArPEGEGEEKGENESEGDIQAERKGEnESEGDIQAERKGENESEGDIQAErkGDDEGEGEiQA 835
Cdd:COG5271 413 TDEEEEEADEDASAGETE-DESTDVTSAEDDIATDEEADSLAD-EEEEAEAELDTEEDTESAEEDAD--GDEATDED-DA 487
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1655707511 836 GENGEMKGDEGDLQAERKGDDEGEGEiqAGEDGEMKGDEGETGEQELNAENQDEAKEDEKGIDGEEEGDGGESEDE 911
Cdd:COG5271 488 SDDGDEEEAEEDAEAEADSDELTAEE--TSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEA 561
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
680-896 |
1.44e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 43.08 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 680 EARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEVTVTPAPAPDVKGDQEEDPGSQGDVAEAESTGERTDNEVKT 759
Cdd:COG5271 640 PETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDADAAAAEASDDEEETEEADEDAETASEEADAEEADT 719
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 760 PGEGENGEQSGGEARPEGEGEEKGENESEGDIQAERKGENESEGDIQAERKGENESEGDIQAERKGDDEGE---GEIQAG 836
Cdd:COG5271 720 EADGTAEEAEEAAEEAESADEEAASLPDEADAEEEAEEAEEAEEDDADGLEEALEEEKADAEEAATDEEAEaaaEEKEKV 799
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 837 ENGEMKGDEGDLQAERKGDDEGEGEIQAGEDGEMKGDEGETGEQELNAENQDEAKEDEKG 896
Cdd:COG5271 800 ADEDQDTDEDALLDEAEADEEEDLDGEDEETADEALEDIEAGIAEDDEEDDDAAAAKDVD 859
|
|
| TFIIF_alpha |
pfam05793 |
Transcription initiation factor IIF, alpha subunit (TFIIF-alpha); Transcription initiation ... |
723-895 |
1.80e-03 |
|
Transcription initiation factor IIF, alpha subunit (TFIIF-alpha); Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) or RNA polymerase II-associating protein 74 (RAP74) is the large subunit of transcription factor IIF (TFIIF), which is essential for accurate initiation and stimulates elongation by RNA polymerase II.
Pssm-ID: 310411 [Multi-domain] Cd Length: 528 Bit Score: 42.24 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 723 PAPAPDVKGDQEEDPGSQGDVAEAESTGERTDNEVKTPGEGENGEQsGGEARPEGegeekgenesegdiQAERKGENESE 802
Cdd:pfam05793 189 PAAFGEHDEETEGEKGGGGRGKDLKIKDLEGDDEDDGDESDKGGED-GDEEKKKK--------------KKKKLAKNKKK 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 803 GDIQAERKGENESEGDIQAERKGDDEGEGEIQAGENGEMKGDEGDlqAERKGDDEgegEIQAGEDGemKGDEGETGEQEL 882
Cdd:pfam05793 254 LDDDKKKKRGGDDDAFEYDSDDGDDEGREEDYISDSSASGNDPEE--REDKLSPE---EPAKGEIE--QSDDSEESEEEK 326
|
170
....*....|...
gi 1655707511 883 NAENQDEAKEDEK 895
Cdd:pfam05793 327 NEEEGKLSKKGKK 339
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
678-840 |
2.10e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 41.88 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 678 LGEARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKlPEvtvtpapapdvkgDQEEDPGSQGDvAEAESTGERTDNEV 757
Cdd:PHA03169 114 LASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAP-PE-------------SHNPSPNQQPS-SFLQPSHEDSPEEP 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 758 KtPGEGENGEQSGGEArpegegeekgenesegdiQAERKGENESEGDiQAERKGENESEGDIQAER-KGDDEGEGEIQAG 836
Cdd:PHA03169 179 E-PPTSEPEPDSPGPP------------------QSETPTSSPPPQS-PPDEPGEPQSPTPQQAPSpNTQQAVEHEDEPT 238
|
....
gi 1655707511 837 ENGE 840
Cdd:PHA03169 239 EPER 242
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
680-912 |
3.03e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 41.92 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 680 EARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEVTVTPAPA-PDVKGDQEEDPGSQGDVAEAESTGErTDNEVK 758
Cdd:COG5271 372 AADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEeADEDASAGETEDESTDVTSAEDDIA-TDEEAD 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 759 TPGEGENGEQSGGEarpegegeekgenesegDIQAERKGENESEGDIQAERKGENESEGDIQAERKGDDEGEGEIQAGEN 838
Cdd:COG5271 451 SLADEEEEAEAELD-----------------TEEDTESAEEDADGDEATDEDDASDDGDEEEAEEDAEAEADSDELTAEE 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 839 GEmkGDEGD----LQAERKGDDEGEGEIQAGEDGEMKGDEGETGEQELNAENQ----DEAKEDEKGIDGEEEGDGGESED 910
Cdd:COG5271 514 TS--ADDGAdtdaAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEedepDEAEAETEDATENADADETEESA 591
|
..
gi 1655707511 911 EE 912
Cdd:COG5271 592 DE 593
|
|
| TolA |
COG3064 |
Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis]; |
685-893 |
4.36e-03 |
|
Membrane protein TolA involved in colicin uptake [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442298 [Multi-domain] Cd Length: 485 Bit Score: 41.18 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 685 KDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEVTVTPAPAPDVKGDQEEDPGSQGDVAEAESTGERTDNEVKTPGEGE 764
Cdd:COG3064 120 EKAEEAKRKAEEEAKRKAEEERKAAEAEAAAKAEAEAARAAAAAAAAAAAAAARAAAGAAAALVAAAAAAVEAADTAAAA 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 765 NGEQSGGEARPEGEGEEKGENESEGDIQAERkGENESEGDIQAERKGENESEGDIQAERKGDDEGEGEIQAGENGEMKGD 844
Cdd:COG3064 200 AAALAAAAAAAAADAALLALAVAARAAAASR-EAALAAVEATEEAALGGAEEAADLAAVGVLGAALAAAAAGAAALSSGL 278
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1655707511 845 EGDLQAERKGDDEGEGEIQAGEDGEMKGDEGETGEQELNAENQDEAKED 893
Cdd:COG3064 279 VVVAAALAGLAAAAAGLVLDDSAALAAELLGAVAAEEAVLAAAAAAGAL 327
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
745-889 |
4.42e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 41.04 E-value: 4.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 745 EAESTGERTDNEVKTPGEGENGEQSGGEARPEGEGEEKGENESEGDIQAERKGENESEGDIQAERKGENESEGDIQAERK 824
Cdd:PRK12678 57 EARGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEA 136
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1655707511 825 GDDEGEGEIQAGENGEMKGDEGDlQAERKGDDEGEGEIQAGEDGEmKGDEGETGEQELNAENQDE 889
Cdd:PRK12678 137 ARRGAARKAGEGGEQPATEARAD-AAERTEEEERDERRRRGDRED-RQAEAERGERGRREERGRD 199
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
673-895 |
6.73e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.89 E-value: 6.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 673 RSLDTLGEARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEV----TVTPAPAPDVKGDQEEDPGSqgdvAEAES 748
Cdd:PTZ00121 1675 KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELkkaeEENKIKAEEAKKEAEEDKKK----AEEAK 1750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 749 TGERTDNEV-KTPGEGENGEQSGGEARPEGEGEEKGENESEGDIQAERKGEN--ESEGDIQaerKGENESEGDIQAERKG 825
Cdd:PTZ00121 1751 KDEEEKKKIaHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDifDNFANII---EGGKEGNLVINDSKEM 1827
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1655707511 826 DDEGEGEIQAGENgeMKGDEGDLQAERKGDDEGEgeiqAGEDGEMKGD-EGETGEQELNAENQDEAKEDEK 895
Cdd:PTZ00121 1828 EDSAIKEVADSKN--MQLEEADAFEKHKFNKNNE----NGEDGNKEADfNKEKDLKEDDEEEIEEADEIEK 1892
|
|
| PRK10734 |
PRK10734 |
putative calcium/sodium:proton antiporter; Provisional |
461-542 |
8.28e-03 |
|
putative calcium/sodium:proton antiporter; Provisional
Pssm-ID: 182684 [Multi-domain] Cd Length: 325 Bit Score: 39.63 E-value: 8.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 461 VFVAlAIVCDEYFVPALgvitdklqisedVAGATFMAAGGSAPELFTSLIGIFISHSNVGIGTIVGSAVFNILFVIGTCA 540
Cdd:PRK10734 23 VFAA-SILCRTFGIPPL------------IIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLILGLAA 89
|
..
gi 1655707511 541 LF 542
Cdd:PRK10734 90 LI 91
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
680-895 |
8.74e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 8.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 680 EARPSKDKEEESLNQEAKAKPQAKAESKPEEEEPAKlpevtvTPAPAPDVKGDQEEDPGSQGDVAEAESTGE--RTDNEV 757
Cdd:PTZ00121 1484 KADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAE------EAKKADEAKKAEEAKKADEAKKAEEKKKADelKKAEEL 1557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 758 KTPGEGENGEQsggeARPEGEGEEKGENESEGDIQAERKGENESEGDIQAERKGENESEGDIQAERKGDDE---GEGEIQ 834
Cdd:PTZ00121 1558 KKAEEKKKAEE----AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEElkkAEEEKK 1633
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1655707511 835 AGENGEMKGDEGDLQAERKGDDEGEGEIQAGEdgEMKGDEgetgEQELNAENQDEAKEDEK 895
Cdd:PTZ00121 1634 KVEQLKKKEAEEKKKAEELKKAEEENKIKAAE--EAKKAE----EDKKKAEEAKKAEEDEK 1688
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
685-875 |
9.81e-03 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 39.79 E-value: 9.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 685 KDKEEESLNQEAKAKPQAKAESKPEEEEPAKLPEVTVTPAPApdvKGDQEEDPGSQgdvAEAESTgERTDNEVKTPGEGE 764
Cdd:PRK09510 110 RLAAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAAAKAKAEA---EAKRAAAAAKK---AAAEAK-KKAEAEAAKKAAAE 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1655707511 765 NGEQSGGEARPEGEGeekgenesegdiQAERKGENESEGDIQAERKGENESEGDIQAER-----KGDDEGEGEIQAGENG 839
Cdd:PRK09510 183 AKKKAEAEAAAKAAA------------EAKKKAEAEAKKKAAAEAKKKAAAEAKAAAAKaaaeaKAAAEKAAAAKAAEKA 250
|
170 180 190
....*....|....*....|....*....|....*.
gi 1655707511 840 EMKGDEGDLQAERKGDDEGEGEIQAGEDGEMKGDEG 875
Cdd:PRK09510 251 AAAKAAAEVDDLFGGLDSGKNAPKTGGGAKGNGAQG 286
|
|
| |
