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Conserved domains on  [gi|1650111564|gb|QCQ39473|]
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DUF4369 domain-containing protein [Bacteroides fragilis]

Protein Classification

DUF4369 domain-containing protein( domain architecture ID 10626236)

DUF4369 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4369 pfam14289
Domain of unknown function (DUF4369); This domain family is found in bacteria, and is ...
 27-121 6.72e-16

Domain of unknown function (DUF4369); This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with pfam00578. LPAM signal peptide sequence is found in some family members.


:

Pssm-ID: 433842  Cd Length: 92  Bit Score: 69.30  E-value: 6.72e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1650111564  27 YHLRGVVTNEKlEGRTIYLRDAIEGVVRYDSTIVSEGRFVFNGKVTAPQVRELFIqendsDRFPVTLPVVLEPGEINAKI 106
Cdd:pfam14289   1 YTIEGTIKGLK-DGTKVYLSYDGGGLVKLDSAVVKNGKFTFKGKVDEPPMAYLLI-----DDKSGALPFFLENGTITIKL 74

                          90
                  ....*....|....*...
gi 1650111564 107 GD---IVQVEGTGLNEEM 121
Cdd:pfam14289  75 DPgdfIAKVKGSPLNDEY 92
 
Name Accession Description Interval E-value
DUF4369 pfam14289
Domain of unknown function (DUF4369); This domain family is found in bacteria, and is ...
 27-121 6.72e-16

Domain of unknown function (DUF4369); This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with pfam00578. LPAM signal peptide sequence is found in some family members.


Pssm-ID: 433842  Cd Length: 92  Bit Score: 69.30  E-value: 6.72e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1650111564  27 YHLRGVVTNEKlEGRTIYLRDAIEGVVRYDSTIVSEGRFVFNGKVTAPQVRELFIqendsDRFPVTLPVVLEPGEINAKI 106
Cdd:pfam14289   1 YTIEGTIKGLK-DGTKVYLSYDGGGLVKLDSAVVKNGKFTFKGKVDEPPMAYLLI-----DDKSGALPFFLENGTITIKL 74

                          90
                  ....*....|....*...
gi 1650111564 107 GD---IVQVEGTGLNEEM 121
Cdd:pfam14289  75 DPgdfIAKVKGSPLNDEY 92
 
Name Accession Description Interval E-value
DUF4369 pfam14289
Domain of unknown function (DUF4369); This domain family is found in bacteria, and is ...
 27-121 6.72e-16

Domain of unknown function (DUF4369); This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with pfam00578. LPAM signal peptide sequence is found in some family members.


Pssm-ID: 433842  Cd Length: 92  Bit Score: 69.30  E-value: 6.72e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1650111564  27 YHLRGVVTNEKlEGRTIYLRDAIEGVVRYDSTIVSEGRFVFNGKVTAPQVRELFIqendsDRFPVTLPVVLEPGEINAKI 106
Cdd:pfam14289   1 YTIEGTIKGLK-DGTKVYLSYDGGGLVKLDSAVVKNGKFTFKGKVDEPPMAYLLI-----DDKSGALPFFLENGTITIKL 74

                          90
                  ....*....|....*...
gi 1650111564 107 GD---IVQVEGTGLNEEM 121
Cdd:pfam14289  75 DPgdfIAKVKGSPLNDEY 92
tRNA-synt_1c_C pfam03950
tRNA synthetases class I (E and Q), anti-codon binding domain; Other tRNA synthetase ...
 39-113 2.97e-03

tRNA synthetases class I (E and Q), anti-codon binding domain; Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only glutamyl and glutaminyl tRNA synthetases. In some organizms, a single glutamyl-tRNA synthetase aminoacylates both tRNA(Glu) and tRNA(Gln).


Pssm-ID: 427609 [Multi-domain]  Cd Length: 175  Bit Score: 36.87  E-value: 2.97e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1650111564  39 EGRTIYLRDA----IEGVVRYDSTIVSEGRFVFNG-------KVTAP-------------QVRE---LFIQENDSDRF-- 89
Cdd:pfam03950  60 PGEEVRLMDAynikVTEVVKDEDGNVTELHCTYDGddlggarKVKGKiihwvsasdavpaEVRLydrLFKDEDDADFLln 139

                          90       100
                  ....*....|....*....|....*...
gi 1650111564  90 PVTLPVV----LEPGEINAKIGDIVQVE 113
Cdd:pfam03950 140 PDSLKVLteglAEPALANLKPGDIVQFE 167
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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