|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 719.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 12 FKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 92 FICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 172 DNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLTLLEPYML 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 252 GDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQSMFWSLLV 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 1642522490 332 IVILLTWIGARPVEDPYIIVGQILTVLYFMYYILNP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
23-365 |
7.60e-124 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 362.57 E-value: 7.60e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 23 PTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICIYLHIGRG 102
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 103 MYYGSYMFMH--TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNATLTRFF 180
Cdd:COG1290 111 FFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFF 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 181 TFH-FLLPFMVAAATMIHLLFLHQTGSNNPLG----LNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLTLLEPymLGDPD 255
Cdd:COG1290 191 ALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPP 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 256 NFTPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQSMFWSLLVIV 333
Cdd:COG1290 269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFF 348
|
330 340 350
....*....|....*....|....*....|..
gi 1642522490 334 ILLTWIGARPveDPYIIVGQILTVLYFMYYIL 365
Cdd:COG1290 349 IVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
4.88e-88 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 264.23 E-value: 4.88e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 10 PLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 90 FFFICIYLHIGRGMYYGSYMFMH--TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1642522490 168 GFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
5.54e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 243.44 E-value: 5.54e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 19 LVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 99 IGRGMYYGSYMFMH--TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1642522490 177 TRFFTFHFLLPFMVAAATMIHLLFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
231-341 |
5.80e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 60.58 E-value: 5.80e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 231 VGFLTLLMILTVLTLLEPYMLGDPdnftpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNK 310
Cdd:TIGR01156 42 VVILGTIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEN 116
|
90 100 110
....*....|....*....|....*....|..
gi 1642522490 311 SNFRGNQF-YPINQSMFwslLVIVILLTWIGA 341
Cdd:TIGR01156 117 VNKFQNPFrRPVATTVF---LFGTVVALWLGI 145
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 719.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 12 FKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 92 FICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 172 DNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLTLLEPYML 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 252 GDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQSMFWSLLV 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 1642522490 332 IVILLTWIGARPVEDPYIIVGQILTVLYFMYYILNP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 649.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 1 MNKPLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLL 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 81 RTLHANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMD 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 161 LVQWVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMIL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 241 TVLTLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1642522490 321 INQSMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFMYYILNPLVYKLWDKIL 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 640.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 1 MNKPLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLL 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 81 RTLHANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMD 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 161 LVQWVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMIL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 241 TVLTLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1642522490 321 INQSMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFM-YYILNPLVYKLWDKILN 378
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLGALENKMLN 379
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 639.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 5 LRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 85 ANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 165 VWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLT 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 245 LLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQS 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1642522490 325 MFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFMYY-ILNPLVYKLWDKILN 378
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFlVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 630.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 1 MNKPLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLL 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 81 RTLHANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMD 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 161 LVQWVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMIL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 241 TVLTLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1642522490 321 INQSMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFMYYILNPLVYKLWDKIL 377
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 624.01 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 1 MNKPLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLL 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 81 RTLHANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMD 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 161 LVQWVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMIL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 241 TVLTLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1642522490 321 INQSMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFMYYIL-NPLVYKLWDKILN 378
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIiIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 621.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 5 LRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 85 ANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 165 VWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLT 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 245 LLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQS 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1642522490 325 MFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFMYYIL 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 608.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 4 PLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTL 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 84 HANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 164 WVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVL 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 244 TLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1642522490 324 SMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFM-YYILNPLVYKLWDKIL 377
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLiILILMPIASLIENNLL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 587.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 4 PLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTL 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 84 HANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 164 WVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVL 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 244 TLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1642522490 324 SMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFM-YYILNPLVYKLWDKILN 378
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSlFLFFFPLISYLENKLIF 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 539.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 1 MNKPLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLL 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 81 RTLHANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMD 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 161 LVQWVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMIL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 241 TVLTLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1642522490 321 INQSMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFMYYILNPLVYKLWDKILN 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 512.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 4 PLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 84 HANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 164 WVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVL 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 244 TLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1642522490 324 SMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFMYY-ILNPLVYKLWDKILN 378
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFlVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 511.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 1 MNKPLRNSHPLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLL 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 81 RTLHANGASFFFICIYLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMD 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 161 LVQWVWGGFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMIL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 241 TVLTLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1642522490 321 INQSMFWSLLVIVILLTWIGARPVEDPYIIVGQILTVLYFMYY-ILNPLVYKLWDKILN 378
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFlILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
19-365 |
1.04e-134 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 390.07 E-value: 1.04e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 19 LVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICIYLH 98
Cdd:MTH00033 15 IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 99 IGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNATLTR 178
Cdd:MTH00033 95 IGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNR 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 179 FFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLTlLEPY---MLGDPD 255
Cdd:MTH00033 175 FFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG-IEPRietLLQDPE 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 256 NFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQSMFWSLLVIVIL 335
Cdd:MTH00033 254 NFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFII 333
|
330 340 350
....*....|....*....|....*....|.
gi 1642522490 336 LTWIGARPV-EDPYIIVGQILTVLYFMYYIL 365
Cdd:MTH00033 334 LTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
16-371 |
1.41e-129 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 375.82 E-value: 1.41e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 16 NSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICI 95
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 96 YLHIGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNAT 175
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 176 LTRFFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLtLLMILTVLTLLEPYMLGDPD 255
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLGDPE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 256 NFTPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNfrgNQFYPINQSMFWSLLVIVIL 335
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYT---SCLNKLNKFLVFSFIVVNVI 319
|
330 340 350
....*....|....*....|....*....|....*.
gi 1642522490 336 LTWIGARPVEDPYIIVGQILTVLYFMYYILNPLVYK 371
Cdd:MTH00086 320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILLMLFLFY 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
23-365 |
7.60e-124 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 362.57 E-value: 7.60e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 23 PTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICIYLHIGRG 102
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 103 MYYGSYMFMH--TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNATLTRFF 180
Cdd:COG1290 111 FFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFF 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 181 TFH-FLLPFMVAAATMIHLLFLHQTGSNNPLG----LNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLTLLEPymLGDPD 255
Cdd:COG1290 191 ALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPP 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 256 NFTPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQSMFWSLLVIV 333
Cdd:COG1290 269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFF 348
|
330 340 350
....*....|....*....|....*....|..
gi 1642522490 334 ILLTWIGARPveDPYIIVGQILTVLYFMYYIL 365
Cdd:COG1290 349 IVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
4.88e-88 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 264.23 E-value: 4.88e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 10 PLFKIANSALVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 90 FFFICIYLHIGRGMYYGSYMFMH--TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1642522490 168 GFAVDNATLTRFFTFHFLLPFMVAAATMIHLLFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
19-358 |
1.71e-84 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 260.69 E-value: 1.71e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 19 LVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICIYLH 98
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 99 IGRGMYYGSYMFMHTWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNATLTR 178
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 179 FFTFHFLLPFMVAAATMIHLLFLHQTGSNNPLGL-NSDIDKIPFHPYFSFKDIVGFLTLLMILTVLTLLEPYMLGDPDNF 257
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 258 TPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGviaLVLSIAILFILPFTNKSNfrGNQFYPINQSMFWSLLVIVILLT 337
Cdd:MTH00046 249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG---LVLVLSFLFFLWVPTFNG--SSVYSVWRQVNFWLIVSLFFSLS 323
|
330 340
....*....|....*....|.
gi 1642522490 338 WIGARPVEDPYIIVGQILTVL 358
Cdd:MTH00046 324 YLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
5.54e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 243.44 E-value: 5.54e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 19 LVDLPTPSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 99 IGRGMYYGSYMFMH--TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1642522490 177 TRFFTFHFLLPFMVAAATMIHLLFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
2.16e-49 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 163.20 E-value: 2.16e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 208 NPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLTLLEPYMLGDPDNFTPANPLVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1642522490 288 KLGGVIALVLSIAILFILPFTNKSNFRgNQFYPINQSMFWSLLVIVILLTWIGARPVEDPYIIVGQI 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
3.62e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 155.48 E-value: 3.62e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 89 SFFFICIYLHIGRGMYYGSYMFMH--TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 167 GGFAVDNATLTRFFTFHF-LLPFMVAAATMIHLLFLHQTGSNNPLGLNSDIDKIPFHPYFSFKDIVGFLTLLMILTVLTL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1642522490 246 LEPYMLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
1.80e-43 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 146.08 E-value: 1.80e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQFYPINQSMFWSLLVIVILLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1642522490 339 IGARPVEDPYIIVGQILTVLY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-210 |
6.89e-37 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 133.30 E-value: 6.89e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 34 FGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGMYYGSYMFMH- 112
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 113 -TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNATLTRFFTFH-FLLPFMV 190
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 1642522490 191 AAATMIHLLFLHQTGSNNPL 210
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
7.45e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 119.44 E-value: 7.45e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 25 PSNISTWWNFGSLLGLCLVIQIATGLFLAMHYTAHIDLAFSSVAHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGMY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 105 YGSYMFMH--TWMVGVVILFLVMGAAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWVWGGFAVDNATLTRFFTF 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 1642522490 183 H-FLLPFMVAAATMIHLLFLHQTGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
243-341 |
3.37e-13 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 66.95 E-value: 3.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 243 LTLLEPYMLGDPdnftpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQF-YPI 321
Cdd:CHL00058 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPV 128
|
90 100
....*....|....*....|
gi 1642522490 322 NQSMFWSLLVIVILLTwIGA 341
Cdd:CHL00058 129 ATTVFLIGTAVALWLG-IGA 147
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
243-346 |
5.56e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 63.27 E-value: 5.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 243 LTLLEPYMLGDPdnftpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNKSNFRGNQF-YPI 321
Cdd:COG5679 55 LAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPV 129
|
90 100
....*....|....*....|....*.
gi 1642522490 322 NQSMFwSLLVIVILLTWIGAR-PVED 346
Cdd:COG5679 130 ATAVF-LFGTLVTLWLGIGAAlPIDK 154
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
231-341 |
5.80e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 60.58 E-value: 5.80e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1642522490 231 VGFLTLLMILTVLTLLEPYMLGDPdnftpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILFILPFTNK 310
Cdd:TIGR01156 42 VVILGTIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEN 116
|
90 100 110
....*....|....*....|....*....|..
gi 1642522490 311 SNFRGNQF-YPINQSMFwslLVIVILLTWIGA 341
Cdd:TIGR01156 117 VNKFQNPFrRPVATTVF---LFGTVVALWLGI 145
|
|
|