|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 656.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTWMVPKKWLWPTVLLHSLLIATASLSWFKYITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 81 SQNHVSHEPLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 161 LLVALSLLYSSTGSLSFFIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 241 GYGMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 321 GLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430
....*....|....*....|....*....|...
gi 16357412 401 TLITAGYSLYMFLMTQRGKVPNHLLAIEPTHSR 433
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTR 433
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 644.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTWMVPKKWLWPTVLLHSLLIATASLSWFKYITETgWTTTNNYLATDTLSTPLLVLSCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 81 SQNHVSHEPLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 161 LLVALSLLYSSTGSLSFFIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 241 GYGMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 321 GLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430
....*....|....*....|....*....|...
gi 16357412 401 TLITAGYSLYMFLMTQRGKVPNHLLAIEPTHSR 433
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTR 432
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 639.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTWMVPKKWLWPTVLLHSLLIATASLSWFKyITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLK-PPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 81 SQNHVSHEPLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 161 LLVALSLLYSSTGSLSFFIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 241 GYGMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 321 GLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430
....*....|....*....|....*....|...
gi 16357412 401 TLITAGYSLYMFLMTQRGKVPNHLLAIEPTHSR 433
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTR 432
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 615.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTWMVPKKWLWPTVLLHSLLIATASLSWFKYITETGWTTtNNYLATDTLSTPLLVLSCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNF-SLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 81 SQNHVSHEPLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 161 LLVALSLLYSSTGSLSFFIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 241 GYGMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 321 GLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430
....*....|....*....|....*....|...
gi 16357412 401 TLITAGYSLYMFLMTQRGKVPNHLLAIEPTHSR 433
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTR 432
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 525.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 3 KILIPTLALVPVTWMVPKKWLWPTVLLHSLLIATASLSWFKYITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 83 NHVSHEPLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 163 VALSLLYSSTGSLSFFIIQYLgplQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFS---KLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 243 GMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 323 TSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|.
gi 16357412 403 ITAGYSLYMFLMTQRGKVPNHLLAIEPTHSR 433
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTR 428
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-433 |
1.36e-164 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 471.77 E-value: 1.36e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTWMVPKKWLWPTVLLHSLLIATASLSWFKYITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 81 SQNHVSHEPLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 161 LLVALSLLYSSTGSLSFFIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 241 GYGMIRMLVILD-PLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 320 HGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....
gi 16357412 400 GTLITAGYSLYMFLMTQRGKVPNHLLAIEPTHSR 433
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSR 434
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-419 |
5.63e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 370.64 E-value: 5.63e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTWMVPKKWLwptvlLHSLLIATASLSWFKYITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 81 SQNHVSHepLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 161 LLVALSLLYSSTGSLSFFIIQYLGplqlstLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFFG------SLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 241 GYGMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 321 GLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410
....*....|....*....
gi 16357412 401 TLITAGYSLYMFLMTQRGK 419
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGK 406
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-424 |
1.11e-123 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 366.09 E-value: 1.11e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 49 GWTTTNNYLATDTLSTPLLVLSCWLLPLMILASQNHVSHepLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 129 PTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQYLGplqLSTLLDKLWWAGCMLAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLR---KLLSSMGLWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 209 PLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 289 YSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 16357412 369 ALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLYMFLMTQRGKVPNHL 424
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFL 382
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
25-420 |
5.13e-116 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 347.74 E-value: 5.13e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 25 PTVLLHSLLIATASLSWFKYITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILASQNHVSHEplARQRLYISVLTSLQ 104
Cdd:MTH00205 21 WSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 105 IFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFiiqYLG 184
Cdd:MTH00205 99 LILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 185 PLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYPFII 264
Cdd:MTH00205 176 PLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFS 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 265 LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMI 344
Cdd:MTH00205 256 ISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSML 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16357412 345 LARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLYMFLMTQRGKV 420
Cdd:MTH00205 336 MNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKV 411
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-422 |
1.27e-112 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 339.02 E-value: 1.27e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTwMVPKKWLWPTVLLHSLLIATASLSWFKYITeTGWTTTNNYLATDTLSTPLLVLSCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 81 SQNHVSHEPLarQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNNKA--PKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 161 LLVALSLLYSSTGSLSFFIIQYLGPlqlSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPP---SIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 241 GYGMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 321 GLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420
....*....|....*....|..
gi 16357412 401 TLITAGYSLYMFLMTQRGKVPN 422
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPS 415
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
56-433 |
6.75e-88 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 276.58 E-value: 6.75e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 56 YLATDTLSTPLLVLSCWLLPLMILASQNHVSHeplaRQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILIT 135
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 136 RWGNqAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQyLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHL 215
Cdd:COG1008 153 IWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAE-LAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 216 WLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPL-TKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSH 294
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 295 MGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLP 374
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 16357412 375 NLMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLYMFLMTQRGKVPNHLLAIEPTHSR 433
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPR 449
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
32-425 |
6.46e-79 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 253.45 E-value: 6.46e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 32 LLIATASLSWFKYITETGWTTTNN--------YLATDTLSTPLLVLSCWLLPLMILASQNHVSHepLARQrlYISVLTSL 103
Cdd:MTH00204 46 LWGAFDGEGQFQFINLIEWIISPTlnfqwgplVFAVDGVSLFFILLTTLLIPICILISWKSIKF--LFKE--FLLCLLFL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 104 QIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIiqyL 183
Cdd:MTH00204 122 EVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQI---L 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 184 GPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYPFI 263
Cdd:MTH00204 199 LNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLI 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 264 I-LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:MTH00204 279 VmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRL 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 343 MILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLYMFLMTQRGKVPN 422
Cdd:MTH00204 359 IKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSN 438
|
...
gi 16357412 423 HLL 425
Cdd:MTH00204 439 YLL 441
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-427 |
6.55e-79 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 253.59 E-value: 6.55e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 56 YLATDTLSTPLLVLSCWLLPLMILASQNHVSHeplaRQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILIT 135
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 136 RWGnQAERLNAGTYFLFYTLAGSLPL----LVALSLLYSSTGSlsfFIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLY 211
Cdd:PRK05846 153 VWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGT---FDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 212 GMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPL-TKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 291 SVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLAL 370
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 16357412 371 PPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLYMFLMTQRGKVPNHLLAI 427
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKL 445
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-429 |
8.20e-76 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 245.23 E-value: 8.20e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQNHVSHeplaRQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 137 WGNQaERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLsfFIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLW 216
Cdd:TIGR01972 149 WGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGT--FDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 217 LPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDP-LTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 296 GLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPN 375
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 16357412 376 LMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLYMFLMTQRGKVPNHLLAIEP 429
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFP 439
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
23-412 |
6.40e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 240.34 E-value: 6.40e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 23 LWPTVLLHSLLIATAS-LSW--------FKYITETGWTTTNN------YLATDTLSTPLLVLSCWLLPLMILASQNHVSH 87
Cdd:MTH00217 27 LKKIALEWSLLTLTATiLLWasfdgegqFQAIKKFEWIPGIEpvfgpvVFAVDGISIFFLILTALLTPICILISWNSIKF 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 88 epLARQrlYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSL 167
Cdd:MTH00217 107 --LIKE--FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 168 LYSSTGSLSFfiiQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRM 247
Cdd:MTH00217 183 LYSYAGTTDY---QALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRF 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 248 LVILDPLTKELSYPFI-ILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSA 326
Cdd:MTH00217 260 SWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSA 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 327 LFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAG 406
Cdd:MTH00217 340 LFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAG 419
|
....*.
gi 16357412 407 YSLYMF 412
Cdd:MTH00217 420 YSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
2.58e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 219.49 E-value: 2.58e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 113 ATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQYLGPLQLSTLL 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 193 DKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYPFIILALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 273 TGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLA-NTNYERTHSRTMILARGLQT 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 16357412 352 ILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-410 |
2.85e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 205.16 E-value: 2.85e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQNHVSHeplaRQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITR 136
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 137 WGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQYLGPLqLSTLLDKLWWAGCMLAFLVKMPLYGMHLW 216
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHV-VSEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 217 LPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYPFII-LALWGIIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 296 GLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPN 375
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350
....*....|....*....|....*....|....*
gi 16357412 376 LMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLY 410
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-411 |
1.15e-55 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 192.55 E-value: 1.15e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQNhVSHEPlarqRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 137 WGNQaERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQyLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLW 216
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAE-LGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTW 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 217 LPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYP-FIILALWGIIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:PRK12561 208 LPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHM 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 296 GLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPN 375
Cdd:PRK12561 288 GFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSG 367
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 16357412 376 LMGELMI---ISSLFNWSWS----TIVLTGLGTLITAGYSLYM 411
Cdd:PRK12561 368 FVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSM 410
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
57-416 |
2.18e-48 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 171.48 E-value: 2.18e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQNHVSHEplARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITr 136
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA- 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 137 WGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQYLGPlQLSTLLDKLWWAGCMLAFLVKMPLYGMHLW 216
Cdd:COG0651 149 LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA-ELDPGLLLAAFALLLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 217 LPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDP--LTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSH 294
Cdd:COG0651 228 LPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 295 MGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLP 374
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 16357412 375 NLMGELMIISSLFN-WSWSTIVLTGLGTLITAGYSLYMFLMTQ 416
Cdd:COG0651 388 GFVSKWLLLQAALEaGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-410 |
8.30e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 163.92 E-value: 8.30e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 99 VLTSLQIFLILAFGATEAM-MFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALsllYSSTGSLSF 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSNMlMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVY---LKNFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 178 FIIQYLGPLQLSTLLdklwwagcMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLtke 257
Cdd:MTH00094 143 CYFDFFLSWEMFFIL--------SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 258 LSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16357412 338 THSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLY 410
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-411 |
2.92e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 156.79 E-value: 2.92e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQNhVSHEPlarqRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITR 136
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWP-VTFKP----KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAI 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 137 WGNQaERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFfIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLW 216
Cdd:PRK02546 158 WGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTF-DMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 217 LPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYP-FIILALWGIIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:PRK02546 236 LPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHM 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 296 GLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPN 375
Cdd:PRK02546 316 GFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSG 395
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 16357412 376 LMGELMII-----SSLFNWSWSTIV--LTGLGTLITAGYSLYM 411
Cdd:PRK02546 396 FVAELMVFvgfatSDAYTLPFRVVVvfLAAVGVILTPIYLLSM 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
106-411 |
9.00e-40 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 149.33 E-value: 9.00e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 106 FLILA--------FGATEAMMFYVMFEATLIPTLILITRWGNQaERLNAGTYFLFYTLAGS--LPLLVALSLLYSSTGSL 175
Cdd:CHL00011 116 FLMLAmysgqiglFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSifLLIGVLGMGLYGSNEPT 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 176 sfFIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLT 255
Cdd:CHL00011 195 --LNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHA 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 256 KELSYPF-IILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTN 334
Cdd:CHL00011 273 HSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTS 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 335 YERThsRTMILAR--GLQTILPLMATWWFIMALANLALPPLPNLMGELM----IISSLFNWSWSTIVLT---GLGTLITA 405
Cdd:CHL00011 353 YDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIvffgIITSQKYLLMPKILITfvmAIGMILTP 430
|
....*.
gi 16357412 406 GYSLYM 411
Cdd:CHL00011 431 IYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
54-429 |
4.67e-38 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 144.84 E-value: 4.67e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 54 NNYLATDTLSTPLLVLSCWLLPLMILASQnhvshEPLARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLIL 133
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 134 ITRWGNQaERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSF-FIIQYLGPLQLSTLLdkLWWAGCMLAFLVKMPLYG 212
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdYEPLRSHTLPLSTQL--LLLAPILVGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 213 MHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYPFiiLALWGII--MTGSIC-LRQTDLKSLIAY 289
Cdd:PRK06473 224 FHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 290 SSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGL---QTILPLMATWWFIMALA 366
Cdd:PRK06473 302 SSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMA 381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16357412 367 NLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLYMFLMTQRGKVPNHLLAIEP 429
Cdd:PRK06473 382 SAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
8.33e-31 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 114.54 E-value: 8.33e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTWMVPKKWLWPTVLLHSLLIATASLSWFKYITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 16357412 81 SQNHVSHEPLARQRLYISVLTSLQIFLILA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-407 |
2.34e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 116.90 E-value: 2.34e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQnhVSHEPlaRQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITR 136
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAI--GYGEH--RQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 137 WGNqAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQ----YLGPLQLSTLLdklwwagCMLAFLVKMPLYG 212
Cdd:PRK08375 149 GGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgalaENPTVVTAFGF-------VLLALALKAAVFP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 213 MHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIR-MLVILDPLTKE---LSYPFIILALWGIIMTGSICLRQTDLKSLIA 288
Cdd:PRK08375 221 LHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiYFTVFGGDFRFalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 289 YSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANL 368
Cdd:PRK08375 301 YSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLI 380
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 16357412 369 ALPPLPNLMGELMIISSLFN-WSWSTIVLTGLGTLITAGY 407
Cdd:PRK08375 381 GVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
23-424 |
2.48e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 117.12 E-value: 2.48e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 23 LWPTVLLHSLLIATASLSWFKYITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILASQnhvshEPLARQRLYISVLTS 102
Cdd:PRK07363 41 AWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 103 LQIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQaERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSF-FIIQ 181
Cdd:PRK07363 116 INGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFdYDAI 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 182 YLGPLQLSTLLdkLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYP 261
Cdd:PRK07363 195 STQNLSLNTQL--ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 262 fiILALWGII--MTGS-ICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERT 338
Cdd:PRK07363 273 --GLAIIGTIsvIYGAlSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKV 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 339 HSRTMILARGLQTI---LPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAGYSLYMFLMT 415
Cdd:PRK07363 351 GTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRT 430
|
....*....
gi 16357412 416 QRGKVPNHL 424
Cdd:PRK07363 431 CFGRLDNKL 439
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-387 |
8.92e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 115.84 E-value: 8.92e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQNHVSHEPLarQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITR 136
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESG--PEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 137 WGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSL-----SFFIIQYLGPLQLSTLLDKLWWAGCMLA-----FLV 206
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmadlSAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 207 KMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRML-------VILDPLTKELSYPFIILALWGIIMTGSICLR 279
Cdd:PRK12667 236 KAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 280 QTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATW 359
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFA 395
|
330 340
....*....|....*....|....*...
gi 16357412 360 WFIMALANLALPPLPNLMGELMIISSLF 387
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALL 423
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
207-401 |
7.85e-25 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 106.94 E-value: 7.85e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 207 KMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILD--PLTKELSYPFIILALWGIIMTGSICLRQTDLK 284
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 285 SLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMA 364
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 16357412 365 LANLALPPLPNLMGELMIISSLFN---WSWSTIVLTGLGT 401
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTL 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-387 |
1.32e-20 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 94.80 E-value: 1.32e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQNHVSHEPLARQRLYISVLTSLQIFLILAFGATEAMM-FYVMFEATLIPTLILIT 135
Cdd:PRK08667 73 FHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFsFLFFWEIMALSSFFLVM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 136 RWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFfiiqylGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHL 215
Cdd:PRK08667 153 NDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 216 WLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLviLDPLTKELSYPFIIL------ALWGIIMTgsicLRQTDLKSLIAY 289
Cdd:PRK08667 227 WLPYAHPASPSNVSALMSGVMLKVAVYGLVRFL--MDVLSPELWWGVLILlagsisALLGVIYA----LKEHDLKGLLAY 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 290 SSVSHMGLVVGGILIQTPWGFTG-----------ALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMAT 358
Cdd:PRK08667 301 SSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSA 380
|
330 340
....*....|....*....|....*....
gi 16357412 359 WWFIMALANLALPPLPNLMGELMIISSLF 387
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-404 |
3.78e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 83.46 E-value: 3.78e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 91 ARQRLYISVLTSLQIFLILAFGATEAMMFYVMFEATLIPTLILITrWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYS 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 171 STGSLSFFIIQYLGPLQLSTLLdklwwagcmLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVI 250
Cdd:PRK07234 170 ANGTFAFSGLATADPEAFALIA---------LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 251 LDPLTKELSYPFIILALWGIImtgsICLRQTDLKSLIAYSSVSHMGLVVGGILIqtpwgftgALILMIAHGLTSSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16357412 331 ANTNYERTHS--RTMILARGLqtilplmatwWFIMALANLALPPLPNLMG---ELMIISSLFNWSWSTIVLTGLGTLIT 404
Cdd:PRK07234 309 AGALPSRNFTelISQMLGIGK----------WIPLTMASFSIAGFPLLAGfvsKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-410 |
4.26e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 83.48 E-value: 4.26e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 106 FLILAFGATEAMM------FYVMFEATLIPTLILITRwGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFfi 179
Cdd:PRK12665 117 YLILVAGVSNAFLagdlfnLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNM-- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 180 iqylgpLQLSTLLDKL-------WWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILD 252
Cdd:PRK12665 194 ------ADLAVRLDELpsgtrtaLFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 253 PlTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLAN 332
Cdd:PRK12665 268 P-GGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVG 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 333 TNYERTHSRTMILARGLQTILPLMATWWFIMALaNLA-LPPLPNLMGELMIISS-LFNWSWSTIVLTGlGTLITAGYSLY 410
Cdd:PRK12665 347 LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
204-421 |
2.38e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 80.95 E-value: 2.38e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 204 FLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVIL--DPLTKELSYPFIILALWGIIMTGSICLRQT 281
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 282 DLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTnYERTHSRTMILARGLQTILPLMATWWF 361
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPVAAWGV 374
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16357412 362 IM-ALANLALPPLPNLMGELMIISSLFNWSwSTIVLTGLGTLITAGYSLYMFLMTQRGKVP 421
Cdd:PRK08676 375 ILgSAAIIGMPPFPLFLSKFFILLQLGGIS-VWLVLAVLLLLLLAASSFAIFLLKAFTRVS 434
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-386 |
4.54e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.43 E-value: 4.54e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 111 FGATEAMMFYVMFEATLIPTLILITRwGNQAERLNAGTYFLFYTLaGSLPLLVALSLLYSSTGSLSFF-IIQYLgpLQLS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFAdISQGL--INDT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 190 TLLDKLWWAGCMLAF-LVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILdPLTKELS--------- 259
Cdd:PRK08668 191 STGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvp 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 260 ---YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYE 336
Cdd:PRK08668 270 lfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 16357412 337 RTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSL 386
Cdd:PRK08668 350 RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
120-406 |
3.25e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 77.68 E-value: 3.25e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 120 YVMFEATLIPTLILITrWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFII-------QYLGPLQLSTLL 192
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 193 dklwwagCMLAFLVKMPLYgMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYPFIILALWGIIM 272
Cdd:PRK12663 213 -------FLLAFGMKAALF-PFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMV 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 273 TGSI-CLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQT 351
Cdd:PRK12663 285 IGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYR 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 16357412 352 ILPLMATWWFIMALANLALPPLPNLMGELMII-SSLFNWSW---STIVLTGLGTLITAG 406
Cdd:PRK12663 365 KEPLFGALFLILIFAIGGLPPFSGFWGKVLLVqGALDNGAYillALMLITSLITMYSLF 423
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
20-413 |
1.45e-14 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 75.54 E-value: 1.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 20 KKWLWPTVLLHSLLIATASLswFKYITETGWTTTNNYLATDTLSTPLLVLSCWLLPLMILASQNHVSHEPLARQRLYISV 99
Cdd:COG1007 31 SRRLLAGLALLGLLLALALL--LLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 100 LTSLQIFLILAfGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGT-YFLFYTLAgSLPLLVALSLLYSSTGSLSFF 178
Cdd:COG1007 109 LFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALS-SGFLLYGISLLYGATGSLNLA 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 179 IIQylGPLQLSTLLDKLWWAGCML---AFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLlKLGGYGM-IRMLVI-LDP 253
Cdd:COG1007 187 GIA--AALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPG 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 254 LTKELSYPFIILALwgIIMT-GSIC-LRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALF-CL 330
Cdd:COG1007 264 LAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVI 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 331 ANTNYERTHSRTMILARGLQTILPLMAtwwFIMALANLAL---PPLPNLMGELMIISSLFNWSWSTIVLTG-LGTLITAG 406
Cdd:COG1007 342 LLLSRKGGEAEEIEDLAGLARRSPLLA---LAMTIFLLSLagiPPTAGFFGKFYVFSAAVEAGLYWLAVIAvLNSVISAY 418
|
410
....*....|.
gi 16357412 407 YSL----YMFL 413
Cdd:COG1007 419 YYLrvvkAMYF 429
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-402 |
9.04e-14 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 73.08 E-value: 9.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 106 FLILAFGATEAMMF-------YVMFEATLIPTLILITRWGNQAERLNAGTYFLFyTLAGSLPLLVALSLLYSSTGSLSFF 178
Cdd:PRK06525 118 FLLLFIGAMAGLVYsstllglLLFFEITGLCSWALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 179 IIQylgplQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMIRMLVILDPLTKE 257
Cdd:PRK06525 197 ALS-----GLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHV 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 258 LSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQ---TPWGFTGALILMIAHGLTSSALFCLANTN 334
Cdd:PRK06525 271 IGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGAL 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16357412 335 YERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTL 402
Cdd:PRK06525 351 SYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-424 |
3.45e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 71.72 E-value: 3.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 214 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMIRMLVILDpLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 293 SHMGLVVGGILIQtpwGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPP 372
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 16357412 373 LPNLMGELMIISSLFNWSWSTIVLTGLGTL---ITAGYSLYMFLMTQRGKVPNHL 424
Cdd:COG1009 386 FAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVFFGKPRPKT 440
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
113-387 |
8.41e-13 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 70.30 E-value: 8.41e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 113 ATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSF--FIIQYLGPLQLST 190
Cdd:PRK06521 132 ADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFaaMRAAHLSPFWASL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 191 LLdklwwagcMLAFL---VKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRmlVILDPL-TKELSYPFIILA 266
Cdd:PRK06521 212 VF--------LLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR--VVFDLLgAPGWWWGVLVLA 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 267 LWGIIMTGSI--CLRQTDLKSLIAYSSVSHMGLVVGGI---LI--------QTPWGFTGALILMIAHGLTSSALFCLANT 333
Cdd:PRK06521 282 LGAISAVLGVlyALAEHDLKRLLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGA 361
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 16357412 334 NYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLF 387
Cdd:PRK06521 362 VLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-387 |
1.74e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 69.36 E-value: 1.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 119 FYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQYLgpLQLS-TLLDKLWW 197
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVK--MSENpTVVAKIAL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 198 AGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILaaVLLKLGG-YGMIRMLVILDPLT---KELSYPFIILALWGIIMT 273
Cdd:PRK08376 224 ALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinlATVGWVIIILGCLTMFVG 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 274 GSICLRQTDLKSLIAYSSVSHMG---------LVVGGILIQTPWGFT---GALILMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK08376 302 VAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGTR 381
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 16357412 342 TMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLF 387
Cdd:PRK08376 382 NLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA 427
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
113-431 |
1.93e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 69.40 E-value: 1.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 113 ATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSffIIQYLGplQLSTLL 192
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNN--ITEILG--QADHIK 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 193 DKLWWAGCMLAFLV----KMPLYGMHLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMIRMLVILDpLTKELSYPFIILAL 267
Cdd:PRK12646 205 NHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 268 WGIIMTGSICLRQTDLKSLIAYSSVSHMGLVV-----GGILIQTPWG---------FTGALILMIAHGLTSSALFCLANT 333
Cdd:PRK12646 283 ITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLFAALFHLMNHAIFKCALFMGVGI 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 334 NYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWS-------WSTIVLTGLG---TLI 403
Cdd:PRK12646 363 IDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslISMIIIVFIGviaSIF 442
|
330 340
....*....|....*....|....*...
gi 16357412 404 TAGYSLYMFLMTQRGKVPNHLLAIEPTH 431
Cdd:PRK12646 443 TFTYALYMVKEVFWGKYDSKVFTKKNIH 470
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
105-400 |
4.79e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 67.87 E-value: 4.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 105 IFLILAFGATEAMM------FYVMFEATLIPTLILiTRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFF 178
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAITAYAL-TAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 179 IIQylgplQLSTLLD----KLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPL 254
Cdd:PRK08377 192 HIA-----QLAGTIDptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 255 TKELSYP--FIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLAN 332
Cdd:PRK08377 267 NGWSSVLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVG 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16357412 333 TNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLG 400
Cdd:PRK08377 347 YVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLG 414
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
113-373 |
9.86e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 67.38 E-value: 9.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 113 ATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTyfLFYTLAGSLPLLVALSLLYSSTGSLSffiiqylgplqLSTLL 192
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTS-----------LSGIL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 193 DKLWWAG-----CMLAFLVKMPLYG------MHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKeLSYP 261
Cdd:PRK12650 196 HSDVWAEkpgltTVVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNWL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 262 FIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK12650 275 LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTR 354
|
250 260 270
....*....|....*....|....*....|..
gi 16357412 342 TMILARGLQTILPLMATWWFIMALANLALPPL 373
Cdd:PRK12650 355 DIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-385 |
1.67e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.91 E-value: 1.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 120 YVMFEATLIPTLILITRwGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLS----FFIIQYL---GPLQLSTLL 192
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNmgdmFLIIQDLptnRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 193 dklwwagCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVI-----LDPLTKELSYPFIILAL 267
Cdd:PRK12662 215 -------IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 268 WGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILAR 347
Cdd:PRK12662 288 LAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCL 367
|
250 260 270
....*....|....*....|....*....|....*...
gi 16357412 348 GLQTILPLMATWWFIMALANLALPPLPNLMGELMIISS 385
Cdd:PRK12662 368 NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-396 |
2.18e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 66.10 E-value: 2.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 214 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMIRMlvilDPLTKELSYPFIILALWG---IIMTGSICLRQTDLKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARL----NPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 290 SSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180
....*....|....*....|....*...
gi 16357412 370 LPPLPNLMG-ELMIISSLFNWSWSTIVL 396
Cdd:PRK12647 370 LPPLFGFLAkELIYEALLEAPLWSLILT 397
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-414 |
3.89e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.84 E-value: 3.89e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 120 YVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQYLGPLQLSTLLDKLwwag 199
Cdd:PRK06589 142 FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMF---- 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 200 cmLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVI---LDPLTKEL--SYPFIILALWGIIMTG 274
Cdd:PRK06589 218 --IYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIFaeFNWLIFIPIVSIFYSS 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 275 SICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILP 354
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFP 375
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16357412 355 LMATWWFIMALANLALPPLPNLMGELMIISSLFNWS--WSTIVLTGLGTLITAGYSLYMFLM 414
Cdd:PRK06589 376 LISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqpWLSIIVMLVVIASSILSALYLLKI 437
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
95-345 |
2.54e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 62.25 E-value: 2.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 95 LYISVltslqIFLILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGS 174
Cdd:MTH00062 77 LFLSL-----IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 175 LSFfiiqylgpLQLSTLLDKLWWAGCMLA--FLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRM-LVIL 251
Cdd:MTH00062 152 FNF--------SDWGSDDSVSLIVYYVLSfmFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFcGFIF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 252 DPLTkeLSYPFIILALWGIIMTGSicLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLA 331
Cdd:MTH00062 224 SGSF--LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLL 299
|
250
....*....|....
gi 16357412 332 NTNYERTHSRTMIL 345
Cdd:MTH00062 300 WCFYEVSGSRNWVL 313
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
213-409 |
4.39e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.77 E-value: 4.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 213 MHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSV 292
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 293 SHMGLV-------VGGILIQTP----WGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWF 361
Cdd:PRK08042 279 ENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 16357412 362 IMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTG-LGTLITAGYSL 409
Cdd:PRK08042 359 VGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARlLGPLLAVGLAI 407
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-413 |
5.59e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 61.38 E-value: 5.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 1 MLKILIPTLALVPVTWMVPKKWLWPTVLLHSLLIATASLsWFKYITETGWTTTNNYLATDTLStplLVLSCWLLPLMILA 80
Cdd:PRK05777 14 ELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVAL-LFVLGAAGGGTAFGGMLVVDGFA---LFLKGLILLASLLA 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 81 SQnhVSHEPLARQR---LYISVLTSLQIFLILAFgATEAMMFYVMFEATLIPTLILITRWGNQAERLNAG-TYFLFYTLA 156
Cdd:PRK05777 90 LL--LARPYLEDRGrgeFYLLVLFALLGMMVMVS-ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAiKYFVLGALA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 157 gSLPLLVALSLLYSSTGSLSFFIIQYLgpLQLSTLLDKLWWAGCML---AFLVKMPLYGMHLWLPKAHVEAPVAGSMILA 233
Cdd:PRK05777 167 -SGFLLYGMSLLYGATGSLSFAGIAKA--LADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 234 AVLlKLGGYGMI-RMLV-ILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFT 311
Cdd:PRK05777 244 TAP-KIAAFAVLlRLLVvAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 312 GALILMIAHGLTSSALFCLANTNYERTHSRTMILA-RGLQTILPLMAtwwFIMALANLAL---PPLPNLMGELMIISSLF 387
Cdd:PRK05777 323 AVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDfAGLSKRSPLLA---AVMTIFMLSLagiPPTAGFWGKFYVFEAAV 399
|
410 420 430
....*....|....*....|....*....|.
gi 16357412 388 NWSWSTIVLTG-LGTLITAGYSL----YMFL 413
Cdd:PRK05777 400 EAGLWWLAVIGvLNSAIGAFYYLrvikLMYF 430
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-403 |
6.20e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 61.02 E-value: 6.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 120 YVMFEATLIPTLILITRWGNQAeRLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSF----FIIQYLGPLQLsTLLDkl 195
Cdd:PRK12666 135 FVFFEVLLAASYGLLLHGSGRA-RVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMadlaQRIAQLPAADR-ALLE-- 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 196 wwAGC---MLAFLVKMPLYGMHLWLPKAHVEA--PVAGsmiLAAVLLKLGGYGMIRMLVILDPLTKELSYPFIILALWGI 270
Cdd:PRK12666 211 --AGAallLVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPG 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 271 ----IMTGSI-CLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLAN------------- 332
Cdd:PRK12666 286 glatLAFGAIgVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrl 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 333 ----TNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFN--------WSWSTIVLTGLG 400
Cdd:PRK12666 366 avtpELYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLA 445
|
...
gi 16357412 401 TLI 403
Cdd:PRK12666 446 ALI 448
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
57-383 |
2.01e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 56.51 E-value: 2.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 57 LATDTLSTPLLVLSCWLLPLMILASQNHVSHEP-LARQRLYISVLTSLQIFLILAfgaTEAMMFYVMFEATLIPTLILIT 135
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLVTS---DNYLQLFIGWEGVGVCSYLLVA 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 136 RWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFFIIQ------------------YLGPLQLSTLLDKLWW 197
Cdd:MTH00032 153 FWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyygggaYESPLAPFAIIGILLL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 198 AGCmlafLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIRMLvildPLTKELSYPFIILALWGII---MTG 274
Cdd:MTH00032 233 IGC----IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 275 SICLRQTDLKSLIAYSSVSHMGLVVggILIQTPWGFTGALILMIAHGLTSSALFCLA-----NTNYERTHSRTMilaRGL 349
Cdd:MTH00032 305 TVGLVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGL 379
|
330 340 350
....*....|....*....|....*....|....
gi 16357412 350 QTILPLMATWWFIMALANLALPPLPNLMGELMII 383
Cdd:MTH00032 380 IHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
169-409 |
2.79e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 55.72 E-value: 2.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 169 YSSTGSLSF-FIIQYLGPLQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMIR- 246
Cdd:TIGR01770 177 YGFTGSLNFeDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRl 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 247 MLVILDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSA 326
Cdd:TIGR01770 257 FLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLG 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 327 LF-CLANT-NYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWS-WSTIVLTGLGTLI 403
Cdd:TIGR01770 337 AFgVLSLLrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGlYWLAVIAVLTSVI 416
|
....*.
gi 16357412 404 TAGYSL 409
Cdd:TIGR01770 417 GAFYYL 422
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-410 |
8.68e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 51.46 E-value: 8.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 213 MHLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMIRmlviLDPLTKELS---YPFIILALWGIIMTGSICLRQTDLKSLIA 288
Cdd:PRK12644 222 FHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR----LAPGFADVPvwrPTVLVLGLATMLLGGWRALRQHDLKLILA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 289 YSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMAtWWFIMALANL 368
Cdd:PRK12644 297 YGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLA-VVAALAAASM 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 16357412 369 A-LPPLPNLMGELMIISSLFN----WSWSTIVLTG--LGTLITAGYSLY 410
Cdd:PRK12644 376 AgLPPLLGFVAKEAALEAVLHdgalGPAGPVVLAGivLGSILTVAYSLR 424
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-419 |
1.58e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 50.41 E-value: 1.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 197 WAGCMLAFLV------KMPLYGMHLWLPKAhVEAPVAGS-MILAAVLLKLGGYGMIRMlvilDPLTKELSYPFIILALWG 269
Cdd:PRK07376 224 WLALLLCILVflgpmaKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGVFLVARM----YPVFEQFPAVMTVIAWTG 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 270 II---MTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPwgfTGALILMIAHGLTSSALFCLANT---------NYER 337
Cdd:PRK07376 299 AItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY---SAGLFHLMTHAYFKAMLFLGSGSvihgmeevvGHDP 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 338 THSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNwswSTIVLTGLGTL---ITAGYSLYMFLM 414
Cdd:PRK07376 376 VLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE---ANPALWFVGFLtagMTAFYMFRMYFL 452
|
....*
gi 16357412 415 TQRGK 419
Cdd:PRK07376 453 TFEGE 457
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
169-414 |
2.40e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 49.11 E-value: 2.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 169 YSSTGSLSFFIIQYLGP--------LQLSTLLDKLWWAGCMLAFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLlKLG 240
Cdd:MTH00144 51 SESESVVKYFIIQSLGSsllifgslIMYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 241 GYGMIRMLVildpLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00144 130 PLFLLSNFL----DLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSS 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 321 GLTssaLFCLANTNYerthSRTMILARGLQTILPLMATWWFIMALAnlALPPLPNLMGELMIISSLFNWSWSTIVLTG-L 399
Cdd:MTH00144 206 GFL---FFSLWSGDS----GSMKDLGSLKPSYKTGLSIISLLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlL 276
|
250
....*....|....*
gi 16357412 400 GTLITAGYSLYMFLM 414
Cdd:MTH00144 277 GSLISLFFYLSVFFS 291
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
233-385 |
3.29e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 3.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 233 AAVLLKLGGYGMIRMLVILDPLTKELSY------PFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQT 306
Cdd:PRK06277 234 SALLQTFSKFVLVALMLVIFKLFGGLSYfpsaqgVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGT 313
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16357412 307 PWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISS 385
Cdd:PRK06277 314 PLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQA 392
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
108-406 |
3.63e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 48.87 E-value: 3.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 108 ILAFGATEAMMFYVMFEATLIPTLILITRWGNQAERLNAG-TYFLFYTLAgSLPLLVALSLLYSSTGSLSFFIIQYLGPL 186
Cdd:MTH00196 7 LCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALS-SGLFLFGCALLCGTTGGLHLSYINLVLNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 187 QLSTLLDKLWWAGCML--AFLVKMPLYGMHLWLPKAHVEAPVAGSMILAAVLlKLGgygmirMLVILDPLTKELSYpFII 264
Cdd:MTH00196 86 GQSFSSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVP-KLG------IFSILVSIGLNVNI-LLI 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 265 LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLA---NTNYErthsr 341
Cdd:MTH00196 158 GGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVYKN----- 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16357412 342 TMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLTGLGTLITAG 406
Cdd:MTH00196 233 LIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAG 297
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-385 |
1.11e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.90 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 106 FLILAFGATEAMMF-------YVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLVALSLLYSSTGSLSFF 178
Cdd:PRK12649 116 YLLLFMGSMIGMVFsgntiqlFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 179 IIqylgpLQLSTLLDKLWWAGCMLAFLV--------KMPLYGMHLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMIRMlv 249
Cdd:PRK12649 196 TI-----LQDSELIENIKGHPLFLITLIlifigaaaKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARI-- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 250 ilDPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVV---GGILIQTP-WGFTGALILMIAHGL 322
Cdd:PRK12649 268 --HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMtmyGYTTYHEPgLGVAAATFHLLNHAT 345
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16357412 323 TSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLALPPLPNLMGELMIISS 385
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYET 408
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
169-404 |
1.61e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.09 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 169 YSSTGSLSFFIIQYLGPLQLSTLldklwwagcmlAFLVKMPLYGMHL--WLPKAHVEAPVAGSMILAAVLLKLGGYGMIR 246
Cdd:PRK06459 144 FIISGTTNFSYLPSPVPLILASF-----------GFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILK 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 247 MLVILDPLTKE-LSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMG--LVVGGILIQTPWGFT--------GALI 315
Cdd:PRK06459 213 MTILTQTIPIGyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVIL 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 316 LMIAHGLTSSALFCLANTNYERTHSRTMILARGlqtilpLMATWWFIMALANLALPPLPNLMGELMIISSLFNWSWSTIV 395
Cdd:PRK06459 293 YSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNR------WIELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHN 366
|
....*....
gi 16357412 396 LTGLGTLIT 404
Cdd:PRK06459 367 VISILFIVT 375
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-424 |
7.33e-05 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 45.30 E-value: 7.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 214 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMIRMlvilDPLTKELSYPFIILALWGIIMT--GSI-CLRQTDLKSLIAY 289
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARF----TPIFAGSQVWFWTVTLVGLITLfwGSLnAVKQTDLKGILAF 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 290 SSVSHMGLV-----VGGILIQTPWG--------FTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLM 356
Cdd:PRK12645 305 STVSQLGLImsllgIGAASLHYQGDdskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPIT 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 357 ATWWFIMALANLALPPLPNLMGELMIISSLFN-----------WSWSTIVLTGLGTLITAGYSLYMFLMTQRGKV-PNHL 424
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGFLSKEMFFESMLNateanlfsldtWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYkPEQL 464
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
201-397 |
2.97e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 42.84 E-value: 2.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 201 MLAFLVKMPLYGMHLWLPKahveapVAGSMILAAVLLkLGGYGMIRMLVILDPLTKELSYPFII-LALWGIIMTGSICLR 279
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFPS------VMSSISWTLCLI-LSTWQKIAPLSILFFFTSHNILPMMTsMAAMSALAGGLGGMN 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 280 QTDLKSLIAYSSVSHMGLVVggiLIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILplmatW 359
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSM-----S 239
|
170 180 190
....*....|....*....|....*....|....*...
gi 16357412 360 WFIMALANLALPPLPNLMGELMIISSLFNWSWSTIVLT 397
Cdd:MTH00011 240 LFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV 277
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-415 |
6.18e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 42.37 E-value: 6.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 212 GMHLWLPKAhVEAPVAGS-MILAAVLLKLGGYGMIRMlvilDPLTKELSYPFIILALWG---IIMTGSICLRQTDLKSLI 287
Cdd:MTH00020 228 GLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRS----SPLFEQAPLALIIVTIVGsltVFFAATVGLVQNDLKKVI 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 288 AYSSVSHMGLVVGGILIQTpwgFTGALILMIAHGLTSSALFCLANTN-YERTHSRTMILARGLQTILPLMATWWFIMALA 366
Cdd:MTH00020 303 AYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLS 379
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 16357412 367 NLALPPLPNLMGELMIISSLFNWSWSTIV--LTGLGTLITAGYSLYMFLMT 415
Cdd:MTH00020 380 LMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLT 430
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
213-391 |
1.49e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.05 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 213 MHLWLPKAhVEAPVAGSMILAAVLLKLGGYGMIRMLVILdpltkELSyPFIILALWGI-----IMTGSICLRQTDLKSLI 287
Cdd:PRK07390 240 LHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVL-----ALS-PVALTVLIVIgtvtaIGASLVAIAQIDIKRAL 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 288 AYSSVSHMGLVVGGILIQTPwgfTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALAN 367
Cdd:PRK07390 313 SYSTSAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGL 389
|
170 180
....*....|....*....|....
gi 16357412 368 LALPPLPNLMGELMIISSLFNWSW 391
Cdd:PRK07390 390 VALLPLGGFWALLRLADGLWAVSP 413
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-409 |
5.73e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.40 E-value: 5.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 214 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGMIRMLVILDPlTKELsypFIILALWGII---MTGSICLRQTDLKSLIAY 289
Cdd:PRK12648 227 HFWLPHA-MAAPTPVSAYLhSATMVKAGVFLLARLWPVLAG-TEEW---FWIVGGAGLItllLGAYFALFQHDLKGLLAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16357412 290 SSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQTILPLMATWWFIMALANLA 369
Cdd:PRK12648 302 STISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAG 381
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 16357412 370 LPPLPNLM------GELMIISSLFNWSWSTIVLTGLGTLITAGYSL 409
Cdd:PRK12648 382 VPLLNGFLskemffAETLDTHLLGSLDWLLPVAATLAGAFSVAYSL 427
|
|
| |
