|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.46e-163 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 458.90 E-value: 4.46e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 1 MTPQAKLIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 81 TGQWDITQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPTLLTCMAVL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1625642493 321 TSTTIAILMVLSTMLLPISPMITTII 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.83e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 389.16 E-value: 1.83e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 1 MTPQAKLIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 81 TGQWDITQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSlNPTLLTCMAVL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 1625642493 321 TSTT-IAILMVLSTMLLPISPMITTII 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.07e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 386.20 E-value: 2.07e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 1 MTPQAKLIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 81 TGQWDITQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPTLLTCMAVL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 1625642493 321 TSTTIAILMVLSTMLLPISPMITTII 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.64e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 352.61 E-value: 3.64e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 1 MTPQAKLIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 81 TGQWDITQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPTLLTCMAVL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTN-HMKRWHTNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKWQFENT 320
|
330 340
....*....|....*....|....*.
gi 1625642493 320 PTSTTIAILMVLSTMLLPISPMITTI 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.29e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 296.88 E-value: 3.29e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 1 MTPQAKLIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 81 TGQWDITQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPTLLTCMAVL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1625642493 321 TSTTIAILMVLSTMLLPISPMITTII 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
7-336 |
2.07e-84 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 259.09 E-value: 2.07e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 7 LIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDI 86
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 87 TQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPTLLTCMAVLSTALGG 166
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 167 WMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLMTTWTKIPSLNAMLFL 246
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 247 TLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKRWHTNKPTSTTIA 326
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
330
....*....|
gi 1625642493 327 ILMVLSTMLL 336
Cdd:MTH00041 327 ILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.10e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 197.74 E-value: 1.10e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 1 MTPQAKLIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 81 tgqwdITQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTspsLNPTLLTCMAVL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKrwHTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLK--KKKNK 310
|
330 340
....*....|....*....|....*
gi 1625642493 321 TSTTIAILMVLSTMLLPISPMITTI 345
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-276 |
9.86e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 177.00 E-value: 9.86e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 5 AKLIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 85 DitqlthptSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPTLLTC-MAVLSTA 163
Cdd:MTH00144 85 F--------SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCvISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 164 LGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLmtTWTKIPSLNAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL--GSLKPSYKTGL 234
|
250 260 270
....*....|....*....|....*....|....
gi 1625642493 244 LFLT-LLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:MTH00144 235 SIISlLLSLGGLPPFLGFCSKLLVLISSMESSPL 268
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-276 |
3.16e-48 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 165.34 E-value: 3.16e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 7 LIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSmtnawhTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 87 TQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPTLLTCMAVLSTALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 167 WMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTLMTTWTKIPSLNAMLFL 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270
....*....|....*....|....*....|
gi 1625642493 247 TLLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMI 272
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-270 |
3.97e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 143.66 E-value: 3.97e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 8 IFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 88 qLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLfmTSPSLNPTLLTCMAVLSTALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 168 MGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNLSTlMTTWTKIPSLNAMLF-L 246
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQ-QYSNPESMSSNLVFLgL 231
|
250 260
....*....|....*....|....
gi 1625642493 247 TLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSL 255
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-276 |
2.31e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 134.09 E-value: 2.31e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 14 LLGTTITISSNHWITAWAGLEINTLAILPMIS-KSHHPRSVEAATKYFLTQAAASALVLF-SSMTNAWhTGQWDITQL-- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 90 ---THPTSSLILTSAIAM-------KLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLF----MTSPSLNP---T 152
Cdd:COG1007 191 alaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrllvEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 153 LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAI-IITYNPK-LTLLNFYL--YALMTTAVFLTLNTIKTP--- 225
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLLSRKgge 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1625642493 226 --NLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:COG1007 351 aeEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLY 403
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
4.98e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 120.52 E-value: 4.98e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 13 LLLGTTITISSNHWITAWAGLEINTLAILPMI-SKSHHPRSVEAATKYFLTQAAASALVLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 79 WHTGQWDITQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNptLLTCMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 159 VLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNP----KLTLLNFYLYALMTTAVF---LTLNTIKTPnLSTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFS 238
|
250 260 270
....*....|....*....|....*....|....*.
gi 1625642493 232 TTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-279 |
8.74e-30 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 118.77 E-value: 8.74e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 14 LLGTTITISSNHWITAWAGLEINTLA--ILPMISKsHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTH 91
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPlyALAALRR-DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 92 PTSS------------LILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLF----MTSPSLNPT--- 152
Cdd:PRK05777 192 ALADgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvVAFGGLSEDwqq 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 153 LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWM--AIIITYNPKLTLLNFYL--YALMTTAVFLTLNTIKTPNL- 227
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvGLAAGTAEGYSAVLFYLlaYLFMTLGAFGVISLLRRKGGe 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1625642493 228 STLMTTWTKI----PSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAA 279
Cdd:PRK05777 352 AESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLA 407
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-281 |
8.97e-30 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 115.49 E-value: 8.97e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 23 SNHWITAWAGLEINTLAILPMI-SKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 91 HPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIM-KLPPIALLFMT------SPSLNPTLLTCmAVLSTA 163
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLvKAGGYGLIRRSllylpsSPFIQQILLIL-AIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 164 LGGWMGLNQTQIRKILAFSSISHLGWMAIII----TYNPKLTLLNFYLYALMTTAVFL-----TLNTIKTPNLSTLMTTW 234
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1625642493 235 TKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATA 281
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
7.70e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 113.19 E-value: 7.70e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 13 LLLGTTITISSNHWITAWAGLEINTLAILPMIS-KSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 88 QLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNpTLLTCmAVLSTALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN-VVLIC-AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 168 MGLNQTQIRKILAFSSISHLGW----MAIIITYNPKLTLLNFYLYALMTTAVFLTLNTIK--TPNLSTLMTTWTKIPSLN 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKltKGLIVEVSGLSRKNPVIA 343
|
250 260
....*....|....*....|....*.
gi 1625642493 242 AMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-276 |
2.04e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 111.96 E-value: 2.04e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 14 LLGTTITISSNHWITAWAGLEINTLAILPMIS-KSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 93 TSSLILT------------SAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALL--------FMTSPSLNPT 152
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlrlflyilFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 153 LLTCmAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLN--FYL--YALMTTAVFLTLNTIKTPN-- 226
Cdd:TIGR01770 272 LAII-AFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFGVLSLLRSYKde 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1625642493 227 ----LSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:TIGR01770 351 wieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLY 404
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-282 |
1.73e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 94.44 E-value: 1.73e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 13 LLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 93 TSSL----------ILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIM-KLPPIALL--------FMTSPSLNPTL 153
Cdd:COG0651 196 LAELdpglllaafaLLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVYAILrvltllfgADPALFLGTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 154 LTcMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLY----ALMTTAVFLT----LNTIKTP 225
Cdd:COG0651 276 LV-LGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTR 354
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1625642493 226 NLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAI 282
Cdd:COG0651 355 DLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVL 411
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
5.76e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 91.07 E-value: 5.76e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 15 LGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSV---------EAATKYFLTQAAASALVLFSSMTNAWHTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 84 --WDITQLTHPTSS----------LILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLppIALLFMTSPSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTNielrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 152 TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYALM----TTAVFLTLNTIK---- 223
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTylvsALASFTVICTLEefgt 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1625642493 224 -----------------TPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00198 437 rtptsrqrdgsfgnynlVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-263 |
4.16e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 88.14 E-value: 4.16e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 1 MTPQAKLIFTTSLLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHP-RSVEAATKYFLTQAAASALVL--FSSM-- 75
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLyg 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 76 TNAWHTGQWDI------TQLTHPTSSLI----LTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIAL---- 141
Cdd:CHL00049 188 LSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALatri 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 142 ---LFMTSPSLNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAI-IITYNPK------LTLLNFYLYALM 211
Cdd:CHL00049 268 fdiPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNdgyasmITYMLFYIFMNL 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1625642493 212 TTAVFLTLNTIKT--PNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 348 GTFACIVLFGLRTgtDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
8.90e-18 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 83.95 E-value: 8.90e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 50 PRSVEAATKYFLTQAAASALVLF-SSMTNAWHTGQwdiTQLTHPTSSLI-------------LTSAIAMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAIALALItspslglalalvfVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 116 PEVLQGSPLTTGLLLSTIMKLPPIAL----LFMTSPSLNP---TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairlLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 189 WMAI--IITYNPKLTLLNFYL--YALMTTAVF--LTLNTIKT--PNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGF 260
Cdd:PRK02504 314 FVMIglVAGTEAGYASMVFYLlaYLFMNLGAFacVILFSLRTgtDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 1625642493 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-282 |
1.37e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 71.27 E-value: 1.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 38 LAILPM---ISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQW--DITQLTHPTSSLILTSAI--------AM 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLTAQLLLflaffiafAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 105 KLGLVPFHFWFPEVLQGSPLTTGLLLSTIM-KLPPIALL-FM------TSPSLNPTLLTcMAVLSTALGGWMGLNQTQIR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlKMGGYGLLrFAlplfpeASAYFAPLLAA-LGVIGIIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 177 KILAFSSISHLGWMAI-IITYNPK------LTLLNFylyALMTTAVFLTLNTI----KTPNLSTLMTTWTKIPSLNAMLF 245
Cdd:COG1008 301 RLIAYSSVSHMGFVLLgIFALNPLglqgavLQMVSH---GLITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFL 377
|
250 260 270
....*....|....*....|....*....|....*..
gi 1625642493 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAI 282
Cdd:COG1008 378 LAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAA 414
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
23-282 |
1.00e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.87 E-value: 1.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 23 SNHWITAWAGLEINTLAILPMISKSHHpRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDIT-------QLTHPTSS 95
Cdd:PRK08668 117 ANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 96 LI----LTSAIAMKLGLVPFHFWFPE-----------VLQGSPLTTG-----LLLSTIM--KLPPIALLFMTSPSLNpTL 153
Cdd:PRK08668 196 LIvflfLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaygflLVLYVLPgtKLFSEFGTYRGVPLFN-YI 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 154 LTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLT----LLNFYLYALMTTAVFLTLNTI----KTP 225
Cdd:PRK08668 275 LAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFNHALFKGLFFLIFAAViyrtGTT 354
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1625642493 226 NLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAI 282
Cdd:PRK08668 355 KISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
2.60e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 67.43 E-value: 2.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 33 LEINTLAILPMIS-KSHHPRSVEAATKYFLTQAAASALVLFS---------SMTNAWHTGQWDITQLTHPTSSL-ILTSA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 102 IAMKLGLVPFHFWFPEVLQGSP--LTTGLLLSTIMKLPPIALLFMT--SPSLNPT----LLTCMAVLSTALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 174 QIRKILAFSSISHLGWM------AIIITYNPKLT----------LLNFYLYALMTTAVFLT----LNTIKTPNLSTLMTT 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|...
gi 1625642493 234 WTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-282 |
4.29e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 60.66 E-value: 4.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 101 AIAMKLGLVPFHFWFPEVLQG-SPLTTGLLLSTIMKLPPIALL----------FMTSPSLNpTLLTCMAVLSTALGGWMG 169
Cdd:PRK08375 211 ALALKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIriyftvfggdFRFALGLG-WLLAVLALLSMLVGSLAA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 170 LNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLN--FYL--YALMTTAVFLTLNTI----KTPNLSTLMTTWTKIPSLN 241
Cdd:PRK08375 290 LGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTA 369
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1625642493 242 AMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAI 282
Cdd:PRK08375 370 AAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVL 410
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
5.15e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 60.34 E-value: 5.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 50 PRSVEAATKYFLTQAAASALVLFSSMTNAW-HTGQWDITQL-THPTSS-------LILTSAIAMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELlNLPLPFgvqtwlfLAFFIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 121 GSPLTTGLLLSTIM-KLPPIALLFMTSPsLNP-------TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLlKMGTYGFLRFNLP-LFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 193 IITYNPKLTLLN--FYLYA--LMTTAVFLTLNTI----KTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGavFQMIShgLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
....
gi 1625642493 265 LIIQ 268
Cdd:TIGR01972 391 LILL 394
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
8.79e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 59.94 E-value: 8.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 96 LILTSAIAmKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALL------FMTSPSLNPTLLTcMAVLSTALGGWMG 169
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRPTVLV-LGLATMLLGGWRA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 170 LNQTQIRKILAFSSISHLGWMAIIITYNPK------LTLLnfYLYALMTTAVFLTLNTIK----TPNLSTLMTTWTKIPS 239
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAML--LAHALFKAALFLVVGIIDhstgTRDIRKLSGLGRRQPV 363
|
170 180
....*....|....*....|....
gi 1625642493 240 LNAMLFLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 364 LAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-270 |
5.55e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.47 E-value: 5.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 48 HHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQL-----THPTSSLILTSAIAM------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 117 EVLQG-SPLTTgLLLSTIMKLPPIALLFMTSP--SLNPTLLTCMAV--LSTAL-GGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:COG1009 236 DAMEGpTPVSA-LLHAATMVKAGVYLLARLSPlfALSPVWLTVVAIigAITALfAALIALAQTDIKRVLAYSTVSQLGYM 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 191 AIIITynpkltlLNFYLYA---LMTTAVF------------LTLNTIKTPNLSTLmttWTKIPSLNAMLFLTLLSLAGLP 255
Cdd:COG1009 315 FLALG-------VGAYVAAlfhLLTHAFFkallflgagsviHATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIP 384
|
250
....*....|....*
gi 1625642493 256 PLTGFLPKWLIIQEL 270
Cdd:COG1009 385 PFAGFFSKEAILEAA 399
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-267 |
8.05e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.67 E-value: 8.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 96 LILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIAL------------LFMTSPSLNpTLLTCMAVLSTA 163
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLiirivydvfkanFVFTTLPFN-NVFMILAALAIV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 164 LGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLY----ALMTTAVFLTLNTIK----TPNLSTLMTTWT 235
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWK 371
|
170 180 190
....*....|....*....|....*....|..
gi 1625642493 236 KIPSLNAMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-266 |
1.42e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 56.08 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 109 VPFHFWFPEVLQG-SPLTTGLLLSTIMKLPpIALLFMTSPSLNPT-----LLTCMAVLSTALGGWMGLNQTQIRKILAFS 182
Cdd:PRK12647 212 FPFHFWLPNAMEApTPVSAYLHSATMVKAG-IYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 183 SISHLGWMAIIITYNPKLTLLNFYLY----ALMTTAVFLTLNTIK----TPNLSTLMTTWTKIPSLNAMLFLTLLSLAGL 254
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
170
....*....|..
gi 1625642493 255 PPLTGFLPKWLI 266
Cdd:PRK12647 371 PPLFGFLAKELI 382
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-268 |
1.67e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 55.73 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 92 PTSSLILTSAIAMKLGLVPFhFWFPEVLQGSPLTTGLLLSTIMKLPPI-------ALLFMTSPSLNPTLLTCMAVLSTAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTKVGIyalirvfTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 165 GGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYAL----MTTAVFLTLNTIK----TPNLSTLMTTWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVhdmvVKTALFLIAGSLVrltgYRSLQYLGGLYRK 365
|
170 180 190
....*....|....*....|....*....|..
gi 1625642493 237 IPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-268 |
4.75e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 54.27 E-value: 4.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 34 EINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQ-----LTHPTSSLILTSAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 109 V------PFHFWFPEVLQGSPLTTGLLLSTIMKLPPIAL------LFMTSPSLNP--TLLTCMAVLSTALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSaqGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 175 IRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYA----LMTTAVFLTLNTI----KTPNLSTLMTTWTKIPSLNAMLFL 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260
....*....|....*....|..
gi 1625642493 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-279 |
8.83e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.40 E-value: 8.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 8 IFTTSLLLgttiTISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSS----------MTN 77
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 78 AWHTGQW-DITQLTHPTSSLILTSAIAM-------KLGLVPFHFWFPEVLQGSPLTTGLLLSTImkLPPIALL------F 143
Cdd:PRK06458 192 GEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGV--LLNVALYavlryyI 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 144 MTSPSLNP----TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKL----TLLNFYLYALMTTAV 215
Cdd:PRK06458 270 LIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAI 349
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1625642493 216 FLT----LNTIKTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAA 279
Cdd:PRK06458 350 FFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIA 417
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
80-263 |
2.22e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 52.74 E-value: 2.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 80 HTGQW-DITQLTHPTSSLILTSAIAmKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSL--NPT---L 153
Cdd:PRK12650 196 HSDVWaEKPGLTTVVAVLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 154 LTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIII----TYNPKLTLLNFYLYALMTTAVFLTLNTIK----TP 225
Cdd:PRK12650 275 LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIgvgtPFALTAAVVHTLAHALFKSSLFMLIGVVDhqagTR 354
|
170 180 190
....*....|....*....|....*....|....*...
gi 1625642493 226 NLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 355 DIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-268 |
5.39e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 51.11 E-value: 5.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 105 KLGLvpfHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSP-----SLNPTLLTCMAVLSTALGGWMGLNQTQIRKIL 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPlfekaPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 180 AFSSISHLGWMAIIITY--NPKLTLLNFYLYALMTTAVFLTLN------TIKTPNLSTLMTTWTKIPSLNAMLFLTLLSL 251
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGsvihstTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSI 397
|
170
....*....|....*..
gi 1625642493 252 AGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 398 MGLPYLTGFYSKDLILE 414
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-268 |
1.34e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 49.95 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 86 ITQLTHPTSSLILTSAI------AMKLGLVPFHFWFPEVLQGSP---------LTTGLLLSTIMKLppIALLFMTSPSLN 150
Cdd:PRK07691 197 IAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYAPPiaiaalfgaLLTKVGVYAIART--FTLFFSHDTSFT 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 151 PTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLN--FYLYALM--TTAVFLTLNTI---- 222
Cdd:PRK07691 275 HYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGaiYYLIHDMivKAALFLLIGIMikit 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1625642493 223 KTPNL---STLMTTWtkiPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 355 GTTDLkkmGGLIKRY---PVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
1.41e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 50.11 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 55 AATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTSSLILT-----SAIAMKLGLVPFHFWFPEVLQGSPLTTGLL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVflllfLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 130 LSTIM-KLPPIALLFMTSPSLNPTLLTCMAVL-----STALGGWMGLNQTQIRKILAFSSISHLG--------WMAIIIT 195
Cdd:PRK08667 243 MSGVMlKVAVYGLVRFLMDVLSPELWWGVLILlagsiSALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 196 YNPKLTLLNF-------YLYALMTTAVFLTLNTI----KTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 323 GLDTLALLALggalfhsLNHALFKSLLFLTAGSVvhatGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
....*.
gi 1625642493 265 LIIQEL 270
Cdd:PRK08667 403 LLYESF 408
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.53e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 49.71 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 55 AATKYFLTQAAASALVLFSSMTNAWHTGQWD------ITQLTHPTSSLILTSAI----AMKLGLVPFHFWFPEV-LQGSP 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 124 LTTGLLLSTIMKLPPIAL------LFMTSPSLNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGW-------- 189
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYilvaaaag 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 190 --------MAIIITYNPKLTLLnFYLYALMTTAVfltlNTIKTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFL 261
Cdd:PRK07363 318 tqlsllgaVAQMISHGLILALL-FHLVGIVERKV----GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFV 392
|
....*..
gi 1625642493 262 PKWLIIQ 268
Cdd:PRK07363 393 AEFIVFQ 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
2.15e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.44 E-value: 2.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 48 HHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTSS---------------LILTSAiAMKLGLVPFH 112
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghplflitliLIFIGA-AAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 113 FWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPT-----LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 188 GWMAIIITYNPK------LTLLNFYL--YALMTTAVFLTLNTIK----TPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLP 255
Cdd:PRK12649 315 AYLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGIVAheaaTRDIRKLGGLRKEMPITFIVASIAALAMAGIP 394
|
....*...
gi 1625642493 256 PLTGFLPK 263
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-277 |
2.64e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 48.98 E-value: 2.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 110 PFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPT-----LLTCMAVLSTALGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 185 SHLGW-MAII-----ITYNPKLTLLNFY-------LYALMTTAVF---------LTLNTIKTPNLSTLMTTWTKIPSLNA 242
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|....*
gi 1625642493 243 MLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIP 277
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLS 422
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
4.42e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 48.02 E-value: 4.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 33 LEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTH--PTSSLILTSAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 111 FHFWFPEVLQGSPLTTGLLLSTIM---KLPPIALLFMTSPSLNPtLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVvkaGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 188 GWmaiiITYNPKLTLLNFYLYALMTTAVFLTLNTIKTPNL----STLMTTWTKIPslnamLFLTLLSLAGLPPLTGFLPK 263
Cdd:PRK07234 282 GF----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFteliSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSK 352
|
....*...
gi 1625642493 264 WLIIQELT 271
Cdd:PRK07234 353 VLTLKNLL 360
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
5.26e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.04 E-value: 5.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 96 LILTSAIAMKLGLVPFHFWFPEVLQGSP-LTTGLLLSTIMKLPPIAL-----LFMTSPSLNpTLLTCMAVLSTALGGWMG 169
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYPTAPaPVTAVFAGLLTKVGVYAIirthtLLFPGGGLD-TLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 170 LNQTQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYA----LMTTAVFLTLNTIK----TPNLSTLMTTWTKIPSLN 241
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIErqagSSSLRRLGGLAKASPLLA 371
|
170 180
....*....|....*....|....*..
gi 1625642493 242 AMLFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 372 VLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
8.06e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 47.45 E-value: 8.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 82 GQWDITQLTHPTSSLILTSAI---AM-KLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALL-----FMTSPSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 153 LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLG-WMAIIITYNPKLTLLNFYLYALMTTAVFLTLNTI-----KTPN 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1625642493 227 LSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
1.12e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 47.12 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 50 PRSVEAATKYFLTQAAASALVLFSSMTNAWH----TGQWDITQLTHPTSS--------LILTSAIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPpgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 118 VLQGSPLTTGLLLSTIM-KLPPIALL-FM------TSPSLNPTLLTcMAVLSTALGGWMGLNQTQIRKILAFSSISHLGW 189
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILlKMGAYGLLrFSlplfpdASHEFAPIIIT-LGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 190 --MAIIITYNPKLTLLNFYLYA--LMTTAVFLTLNTI----KTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFL 261
Cdd:PRK05846 316 vtLGIFAGNQLGIQGAIFQMIShgLSSAALFLLVGVLydrlHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFV 395
|
....*.
gi 1625642493 262 PKWLII 267
Cdd:PRK05846 396 GEFLIL 401
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
1.20e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 47.00 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 55 AATKYFLTQAAASALVLFSSMTNAWHTG--QWDITQL---THPTSSLILTSA-----IAMKLGLVPFHFWFPEV-LQGSP 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 124 LTTGLLLSTIMKLPPIALL------FMTSPSLNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 198 PKLTLLNFYL----YALMTTAVFLTLNTI--KTPN-----LSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAAVFqmisHGLISALLFLLVGVVykKTGSrdvdvLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
1.72e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 46.32 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 15 LGTTITISSNHWITAWAGLEINTLA---ILPMISKSHHPRSVEAATKYFLTqaaasALVLFSSMTNAWHTGQWDITQLTH 91
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFVFMAFGELST-----VLILAGFAWAFIISGTTNFSYLPS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 92 PTSSLILTSAIAMKLGLVPFHF--WFPEVLQGSPLTTGLLLSTIMKLPPI----ALLFMTSPSLNPTL---LTCMAVLST 162
Cdd:PRK06459 158 PVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVygilKMTILTQTIPIGYFgltILAIGAFSI 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 163 ALGGWMGLNQTQIRKILAFSSISHLGWM-----AIIITYNPKLTLLNFYLYALMT---------TAVFLTLNTIKTPNLS 228
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSGLQEKQSIT 317
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1625642493 229 TLMTTWTKIPSLNAmlFLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 318 YSKKIRNRWIELGL--TLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-194 |
3.05e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.52 E-value: 3.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 13 LLLGTTITISSNHWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAA------SALVLFSSMTNAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 87 TQLTHPTS----SLILTSAIAM------KLGLVPFHFWFPEVLQGSP-LTTGLLLSTIMKLPPIALLFMTS-------PS 148
Cdd:PRK08676 191 TELAAHASllspSVLGASFLFIfigflaKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1625642493 149 LNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIII 194
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGI 316
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-268 |
3.95e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.45 E-value: 3.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 111 FHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSP--SLNPTLL---TCMAVLSTALGGWMGLNQTQIRKILAFSSIS 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALiivTIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 186 HLGWMAIII-TYNPKLTLLNFYLYALMTTAVFLTLNTI-----------KTPNLSTLmttwtkIPSLNAMLFLTLLSLAG 253
Cdd:MTH00020 309 QLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeqdmrKMGGLISF------LPLTYIFFLIGSLSLMG 382
|
170
....*....|....*
gi 1625642493 254 LPPLTGFLPKWLIIQ 268
Cdd:MTH00020 383 FPYLTGFYSKDLILE 397
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
295-340 |
5.45e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 40.32 E-value: 5.45e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1625642493 295 RLAYCATITLPPHTTNHMKRWHTNKPTSTT-IAILMVLSTMLLPISP 340
Cdd:pfam06444 5 RLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
6.98e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.53 E-value: 6.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 101 AIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTI-MKLPPIALLFMTSP-------SLNPTLLTcMAVLSTALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPilplgaqNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 173 TQIRKILAFSSISHLGWMAIIITYNPKLTLLNFYLYAL---MTTAVFLTLNTIKTPNLSTLMTTWTK-----IPSLNAML 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 1625642493 245 FLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
2.31e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.89 E-value: 2.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 107 GLVPFHFWFPEVLQGSPLTTGLLLSTI-MKLPPIALLFMTSPSLNPTL-----LTCMAVLSTALGGWMGLNQTQIRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 181 FSSISHLGWMAI--------IITYNPKLTLLNFY--LY-----ALMTTAVFLTLNTI----KTPNLSTLMTTWTKIPSLN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYhllnhSLFKSVLFLGAGSVwfrtGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 1625642493 242 AMLFLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
2.32e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.71 E-value: 2.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 55 AATKYFLTQAAASALVLFSSMTNAWHTGQ--WDITQLT--HPTSSLILTS------AIAMKLGLVPFHFWFPE------- 117
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGakSYPLALELLLyagfliAFGVKLPIFPLHTWLPDahgeasa 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 118 ----VLQGSPLTTG---LLLSTIMKLPPIALLFmtSPslnptLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK12561 218 pvsmILAGVLLKMGgyaLIRFNVQMLPDAHVYF--AP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
....
gi 1625642493 191 AIII 194
Cdd:PRK12561 291 LLGI 294
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-276 |
5.76e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 41.73 E-value: 5.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 9 FTTSLLLGTTITISSNhWITAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMT---NAWHTGQWD 85
Cdd:PRK06589 122 FNLTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFV 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 86 ITQLTHPTSSLILTSAIAMKLG---LVPFHFWFPEVLQGSPLTTGLLLSTIM----KLPPIALLFMTSPSLNPTLLTCM- 157
Cdd:PRK06589 201 SGGLFSKNQSIILLLMFIYGIAktaIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEf 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 158 ------AVLSTALGGWMGLNQTQIRKILAFSSISHLGW--MAIIITYNPKLTLLNFYL--YALMTTAVFLTLNTI----K 223
Cdd:PRK06589 281 nwlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMGSIyslkK 360
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1625642493 224 TPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:PRK06589 361 EDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQP 413
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
75-197 |
7.25e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 41.43 E-value: 7.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 75 MTNAW---HTGQWDITQL-------THPTSSLILtsAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFM 144
Cdd:MTH00066 182 LSMAWlamNTNSWELQQIfllndnsTLPLLGLIL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIR 259
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1625642493 145 TSPSL--NPTLLT---CMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYN 197
Cdd:MTH00066 260 FHPLLenNQTALTiclCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLN 317
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
68-267 |
7.35e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.48 E-value: 7.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 68 ALVLFSSMTNAWHTGQWDITQLTHPTSSLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSP 147
Cdd:MTH00211 180 SMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 148 SLNP-----TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIITYN-PKLTLLNFYLYAL------MTTAV 215
Cdd:MTH00211 260 LFQNnqlilGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFfkamlfMCSGS 339
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1625642493 216 FL-TLNTI----KTPNLSTLMttwtkiPSLNAMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00211 340 IIhGLNNEqdirKMGGLSKNL------PFTSSCLFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
111-266 |
1.09e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 40.72 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 111 FHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSPSLNPTLLTCMAVL----STAL-GGWMGLNQTQIRKILAFSSIS 185
Cdd:MTH00208 255 LHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLilgsLTALfAASTAISQHDIKKIIAYSTTS 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 186 HLGWMAIIITYN-PKLTLLNFYLYALMTTAVFLTLNTI-----------KTPNLSTLMttwtkiPSLNAMLFLTLLSLAG 253
Cdd:MTH00208 335 QLGLMVVAIGLNqPNLALFHICTHAFFKAMLFLCSGSIihslnneqdlrKMGGLSFLL------PVTSSCIILGSLALMG 408
|
170
....*....|...
gi 1625642493 254 LPPLTGFLPKWLI 266
Cdd:MTH00208 409 TPFLAGFYSKDLI 421
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
54-190 |
2.31e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 39.62 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 54 EAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTSSLILTSAIAMKLGLV----------------PFHFWFPE 117
Cdd:PRK07376 173 DAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWLPD 252
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1625642493 118 VLQGSPLTTGLLLSTIMKLPPIALLFMTSP--SLNPTLLTCMAVLSTA---LGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK07376 253 AMEGPTPISALIHAATMVAAGVFLVARMYPvfEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYM 330
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-271 |
4.21e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.84 E-value: 4.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 105 KLGLvpfHFWFPEVLQGSPLTTGLLLSTIMKLPPIALLFMTSP-----SLNPTLLTCMAVLSTALGGWMGLNQTQIRKIL 179
Cdd:MTH00210 227 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlfegsPLALTIVTILGALTAFFAATVGVVQNDLKKVI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 180 AFSSISHLGWMAIIITynpkltLLNFY--LYALMTTAVFLTL------NTIKTPNLSTLMTTW----TKIPSLNAMLFLT 247
Cdd:MTH00210 304 AYSTCSQLGYMVMVCG------ISNYStsLFHLMNHAFFKALlflsagSVIHAVSDEQDMRKMggliKSIPFTYVMILIG 377
|
170 180
....*....|....*....|....
gi 1625642493 248 LLSLAGLPPLTGFLPKWLIIqELT 271
Cdd:MTH00210 378 SLSLMGFPYLTGFYSKDLIL-ELT 400
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-188 |
6.95e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.12 E-value: 6.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1625642493 53 VEAATKYFLTQAAASALVLFSSMTNAWHTGQWD-----ITQLTHPTSSLILTS---AIAMKLGLVPFHFWFPEVLQGSPL 124
Cdd:MTH00204 162 VRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDyqillNIKLPLSIQKWLLVGfflSLAVKIPQIPFHIWLPQAHVEAPV 241
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1625642493 125 TTGLLLSTI-MKLPPIALLFMTSPSL-------NPTLLTcMAVLSTALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:MTH00204 242 AGSVILAGIlLKLGGYGFLRFSWPLFpaaseyfAPLIVM-LSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMG 312
|
|
| |
