|
Name |
Accession |
Description |
Interval |
E-value |
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
356-1140 |
3.21e-38 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 155.72 E-value: 3.21e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 356 MEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHG------- 428
Cdd:pfam01576 189 ISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNalkkire 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 429 LEAQVKELQLKLKHSQSPDSGKESLLKDL---LDTRELLEELLEGKQRVEEQLRL-RERELTALKGALKEEVASHDQEVE 504
Cdd:pfam01576 269 LEAQISELQEDLESERAARNKAEKQRRDLgeeLEALKTELEDTLDTTAAQQELRSkREQEVTELKKALEEETRSHEAQLQ 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 505 HVRLQY-------QRDTEQLRRSMQDATQDHAALEAE---------------------RQKMSSLVRELQRELEETSEET 556
Cdd:pfam01576 349 EMRQKHtqaleelTEQLEQAKRNKANLEKAKQALESEnaelqaelrtlqqakqdsehkRKKLEGQLQELQARLSESERQR 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 557 GHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQ 636
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 637 QNQEVTGRHQNQVLEKQLAALR-------------EEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLG 703
Cdd:pfam01576 509 EEAKRNVERQLSTLQAQLSDMKkkleedagtlealEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVD 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 704 Q-RRATVETTLRETQEEND-------------------------EFRRRILGLEQQLKEARGLAEGGEAVEARLR----- 752
Cdd:pfam01576 589 LdHQRQLVSNLEKKQKKFDqmlaeekaisaryaeerdraeaearEKETRALSLARALEEALEAKEELERTNKQLRaemed 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 753 ---------DKVHRLEVEKQQLEEALNAAREE------------------EGNLAAAK----RALEVRLDEAQRGLARLG 801
Cdd:pfam01576 669 lvsskddvgKNVHELERSKRALEQQVEEMKTQleeledelqatedaklrlEVNMQALKaqfeRDLQARDEQGEEKRRQLV 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 802 QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDsklaLQQLQAQMEDYKekarKEVADAQRQ 881
Cdd:pfam01576 749 KQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQ----LKKLQAQMKDLQ----RELEEARAS 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 882 AKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGleqEAENKKRFQDDKARqlksLEEKVSR 961
Cdd:pfam01576 821 RDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIAS---GASGKSALQDEKRR----LEARIAQ 893
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 962 LEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGF--QKPSASLSQLE 1039
Cdd:pfam01576 894 LEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTvkSKFKSSIAALE 973
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1040 SQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQH---VNDQKDQLTLRVKALKRQVDEAEEEIERLDSLR 1116
Cdd:pfam01576 974 AKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHadqYKDQAEKGNSRMKQLKRQLEEAEEEASRANAAR 1053
|
890 900
....*....|....*....|....
gi 1614229825 1117 KKAQRELEEQHEVNEQLQARIKSL 1140
Cdd:pfam01576 1054 RKLQRELDDATESNESMNREVSTL 1077
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
563-1143 |
7.61e-23 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 105.79 E-value: 7.61e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 563 FQKNKEELRATKQELLQLR-MEKEEMEEELGEKMEVLQRDLEQARASTR-DTHQVEELKKELRRTQGELKELQAEQQNQE 640
Cdd:COG1196 215 YRELKEELKELEAELLLLKlRELEAELEELEAELEELEAELEELEAELAeLEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 641 vtgrhqnQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEN 720
Cdd:COG1196 295 -------AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 721 DEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARL 800
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 801 GQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigddsklALQQLQAQMEDYkEKARKEVADAQR 880
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLL--------LLLEAEADYEGF-LEGVKAALLLAG 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 881 QAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTArldkelLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVS 960
Cdd:COG1196 519 LRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEV------AAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 961 RLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLES 1040
Cdd:COG1196 593 ARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1041 QNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQ 1120
Cdd:COG1196 673 ALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA 752
|
570 580
....*....|....*....|...
gi 1614229825 1121 RELEEQHEVNEQLQARIKSLEKD 1143
Cdd:COG1196 753 LEELPEPPDLEELERELERLERE 775
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
470-1141 |
6.80e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 102.83 E-value: 6.80e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 470 GKQRVEEQLRLRERELTALKGALKEEVASHDqEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQREL 549
Cdd:TIGR02168 240 ELEELQEELKEAEEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 550 EETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQrDLEQARASTRDthQVEELKKELRRTQGEL 629
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELE-ELESRLEELEE--QLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 630 KELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQdcEEASKAKVASETEAMVLGQRRATV 709
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEEL--EELQEELERLEEALEELREELEEA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 710 ETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVR 789
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVE 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 790 LDEAQRgLARLGQEQQALNRA------LEEEGKQREALRRSKAELEEQKRLLNRTV---DRLNKELEQIGDDSKLA--LQ 858
Cdd:TIGR02168 554 NLNAAK-KAIAFLKQNELGRVtflpldSIKGTEIQGNDREILKNIEGFLGVAKDLVkfdPKLRKALSYLLGGVLVVddLD 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 859 QLQAQMEDYKEKARKEVADAQRQAKDWAS---EAEKNSGGLSRlQDELQRLRQALQtsQAERDTARLDKEL--LAQRLQG 933
Cdd:TIGR02168 633 NALELAKKLRPGYRIVTLDGDLVRPGGVItggSAKTNSSILER-RREIEELEEKIE--ELEEKIAELEKALaeLRKELEE 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 934 LEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLER 1013
Cdd:TIGR02168 710 LEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEA 789
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1014 QNKDLKTRL-ASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI--------------- 1077
Cdd:TIGR02168 790 QIEQLKEELkALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIeslaaeieeleelie 869
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229825 1078 --DDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1141
Cdd:TIGR02168 870 elESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE 935
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
650-1167 |
2.60e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.78 E-value: 2.60e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 650 LEKQLAALREEAD---RGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAmvLGQRRATVETTLRETQEENDEFRRR 726
Cdd:COG1196 198 LERQLEPLERQAEkaeRYRELKEELKELEAELLLLKLRELEAELEELEAELEE--LEAELEELEAELAELEAELEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 727 ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQA 806
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 807 LNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDyKEKARKEVADAQRQAKDWA 886
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLER-LERLEEELEELEEALAELE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 887 SEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK---------------RFQDDKARQ 951
Cdd:COG1196 435 EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAarllllleaeadyegFLEGVKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 952 LKSLEEKVSRLEAELDEEKNTVE---------LLTDRVNRGRDQVDQLRTELMQERSARQD-LECDKISLERQNKDLKTR 1021
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEaaleaalaaALQNIVVEDDEVAAAAIEYLKAAKAGRATfLPLDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1022 LASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIdDERQHVNDQKDQLTLRVKALKRQ 1101
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT-LEGEGGSAGGSLTGGSRRELLAA 673
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229825 1102 VDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEE 1167
Cdd:COG1196 674 LLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE 739
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
351-1140 |
2.86e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.90 E-value: 2.86e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 351 ELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLE 430
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 431 AQVKELQLKLKHSQS-PDSGKESL------LKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEV 503
Cdd:TIGR02168 316 RQLEELEAQLEELESkLDELAEELaeleekLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 504 EHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSL-VRELQRELEETS---EETGHWQSMFQKNKEELRATKQELLQ 579
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAeLKELQAELEELEeelEELQEELERLEEALEELREELEEAEQ 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 580 LRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKEL-----QAEQQNQEVTGRHQNQVLEKQL 654
Cdd:TIGR02168 476 ALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELisvdeGYEAAIEAALGGRLQAVVVENL 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 655 AALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLR-------------ETQEEND 721
Cdd:TIGR02168 556 NAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRkalsyllggvlvvDDLDNAL 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 722 EFRR------RILGLEQQLKEARGLAEGGEAVE-----------ARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKR 784
Cdd:TIGR02168 636 ELAKklrpgyRIVTLDGDLVRPGGVITGGSAKTnssilerrreiEELEEKIEELEEKIAELEKALAELRKELEELEEELE 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 785 ALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDsklaLQQLQAQM 864
Cdd:TIGR02168 716 QLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAE----IEELEAQI 791
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 865 EDYKEkarkevadaqrqakdwasEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRF 944
Cdd:TIGR02168 792 EQLKE------------------ELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED 853
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 945 QDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAS 1024
Cdd:TIGR02168 854 IESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEG 933
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1025 SEgfQKPSASLSQLESQNQLLQERLQAEEREKTVLQStnrKLERRVKELSIQIdDERQHVN----DQKDQLTLRVKALKR 1100
Cdd:TIGR02168 934 LE--VRIDNLQERLSEEYSLTLEEAEALENKIEDDEE---EARRRLKRLENKI-KELGPVNlaaiEEYEELKERYDFLTA 1007
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1614229825 1101 QVDEAEEEIERLDSLRKKAQRELEEQ-----HEVNEQLQARIKSL 1140
Cdd:TIGR02168 1008 QKEDLTEAKETLEEAIEEIDREARERfkdtfDQVNENFQRVFPKL 1052
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
472-969 |
9.60e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 98.86 E-value: 9.60e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 472 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQL---RRSMQDATQDHAALEAERQKMSSLVRELQRE 548
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELeeaQAEEYELLAELARLEQDIARLEERRRELEER 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 549 LEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRdthQVEELKKELRRTQGE 628
Cdd:COG1196 318 LEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEE---ELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 629 LKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRAT 708
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 709 VETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAveARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEV 788
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA--ALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 789 RLDEAQRGLARLGQEQQALNRA----LEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQM 864
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRAtflpLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 865 EDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRF 944
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500
....*....|....*....|....*
gi 1614229825 945 QDDKARQLKSLEEKVSRLEAELDEE 969
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREEL 737
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
344-911 |
8.49e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 92.69 E-value: 8.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 344 KALAGQAELTRKMEELQKKLDEevKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQee 423
Cdd:COG1196 203 EPLERQAEKAERYRELKEELKE--LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEE-- 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 424 glrhgLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEV 503
Cdd:COG1196 279 -----LELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 504 EHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRME 583
Cdd:COG1196 354 EEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAEL 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 584 KEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVtgRHQNQVLEKQLAALREEADR 663
Cdd:COG1196 434 EEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA--RLLLLLEAEADYEGFLEGVK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 664 GRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMV----------------LGQRRATVETTLRETQEENDEFRRRI 727
Cdd:COG1196 512 AALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQnivveddevaaaaieyLKAAKAGRATFLPLDKIRARAALAAA 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 728 LGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQAL 807
Cdd:COG1196 592 LARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELL 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 808 NRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWAS 887
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
570 580
....*....|....*....|....*.
gi 1614229825 888 EAEKNSGGLSR--LQDELQRLRQALQ 911
Cdd:COG1196 752 ALEELPEPPDLeeLERELERLEREIE 777
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
351-1142 |
1.52e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 85.50 E-value: 1.52e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 351 ELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQsskelqnmkllLGQEEGLRhgLE 430
Cdd:TIGR02169 227 ELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKD-----------LGEEEQLR--VK 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 431 AQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQY 510
Cdd:TIGR02169 294 EKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAEL 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 511 QRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKnKEELRATKQELLQLRMEKEEMEEE 590
Cdd:TIGR02169 374 EEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAA-IAGIEAKINELEEEKEDKALEIKK 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 591 LGEKMEVLQRDLEQARASTRDTHQ-VEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLE-------------KQLAA 656
Cdd:TIGR02169 453 QEWKLEQLAADLSKYEQELYDLKEeYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEvlkasiqgvhgtvAQLGS 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 657 LREEADRGRELEQQNLQLQ--KTLQQLRQDCEEASKAKVASE-------------------TEAMVLG----------QR 705
Cdd:TIGR02169 533 VGERYATAIEVAAGNRLNNvvVEDDAVAKEAIELLKRRKAGRatflplnkmrderrdlsilSEDGVIGfavdlvefdpKY 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 706 RATVETTLRETQ-EENDEFRRRILG------LEQQLKEARGLAEGG-------EAVEARLRDKVHRLEVEKQQLEEALNA 771
Cdd:TIGR02169 613 EPAFKYVFGDTLvVEDIEAARRLMGkyrmvtLEGELFEKSGAMTGGsraprggILFSRSEPAELQRLRERLEGLKRELSS 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 772 AREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgd 851
Cdd:TIGR02169 693 LQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEEL-- 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 852 dsKLALQQLQAQMEDYKekarkevadaqrqAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRL 931
Cdd:TIGR02169 771 --EEDLHKLEEALNDLE-------------ARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEI 835
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 932 QGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISL 1011
Cdd:TIGR02169 836 QELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKK 915
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1012 ERQNKDLKTRLASSEGfqkpsaSLSQLESQNQLLQErLQAEEREKTVLQSTNRKLERRVKELsiqidderQHVNdqkdql 1091
Cdd:TIGR02169 916 RKRLSELKAKLEALEE------ELSEIEDPKGEDEE-IPEEELSLEDVQAELQRVEEEIRAL--------EPVN------ 974
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|.
gi 1614229825 1092 tlrvkalKRQVDEAEEEIERLDSLRKKAQRELEEQhevnEQLQARIKSLEK 1142
Cdd:TIGR02169 975 -------MLAIQEYEEVLKRLDELKEKRAKLEEER----KAILERIEEYEK 1014
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
614-1167 |
2.89e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 84.34 E-value: 2.89e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 614 QVEELKKELRRTQGELkELQAEQQNQEVTGRHQNQVLEKQLAALREEadrgrELEQQNLQLQKTLQQLRQDCEEASKAKV 693
Cdd:TIGR02168 190 RLEDILNELERQLKSL-ERQAEKAERYKELKAELRELELALLVLRLE-----ELREELEELQEELKEAEEELEELTAELQ 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 694 ASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARglaeggeAVEARLRDKVHRLEVEKQQLEEALNAAR 773
Cdd:TIGR02168 264 ELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILR-------ERLANLERQLEELEAQLEELESKLDELA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 774 EEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDS 853
Cdd:TIGR02168 337 EELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRR 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 854 KLALQQLQAQMEDYKEKARKEVadaQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQG 933
Cdd:TIGR02168 417 ERLQQEIEELLKKLEEAELKEL---QAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDS 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 934 LEQEAENKKRFQDDKARQLKSLEEK---VSRL------EAELDEEKNTV--ELLTDRVNRGRDQVDQLRTELMQERSARQ 1002
Cdd:TIGR02168 494 LERLQENLEGFSEGVKALLKNQSGLsgiLGVLselisvDEGYEAAIEAAlgGRLQAVVVENLNAAKKAIAFLKQNELGRV 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1003 D-LECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDD-- 1079
Cdd:TIGR02168 574 TfLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDgd 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1080 ------------------------ERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ----HEVNE 1131
Cdd:TIGR02168 654 lvrpggvitggsaktnssilerrrEIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELsrqiSALRK 733
|
570 580 590
....*....|....*....|....*....|....*.
gi 1614229825 1132 QLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEE 1167
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEER 769
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
350-968 |
1.48e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.95 E-value: 1.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 350 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGL 429
Cdd:TIGR02168 340 AELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERL 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 430 EAQVKELQLKLKHSQspdsgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLq 509
Cdd:TIGR02168 420 QQEIEELLKKLEEAE-----LKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDS- 493
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 510 yqrdTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELE-----ETSEET---GHWQSMFQKNKEELRATKQELLQLR 581
Cdd:TIGR02168 494 ----LERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdegyEAAIEAalgGRLQAVVVENLNAAKKAIAFLKQNE 569
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 582 MEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVE-------------------------------ELKKELRR------ 624
Cdd:TIGR02168 570 LGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAkdlvkfdpklrkalsyllggvlvvddldnalELAKKLRPgyrivt 649
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 625 -------------------------TQGELKELQAEQQNQEVtgrhQNQVLEKQLAALREEADRGRELEQQNLQLQktlq 679
Cdd:TIGR02168 650 ldgdlvrpggvitggsaktnssileRRREIEELEEKIEELEE----KIAELEKALAELRKELEELEEELEQLRKEL---- 721
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 680 qlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLE 759
Cdd:TIGR02168 722 ------EELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK 795
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 760 VEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKrllnrtv 839
Cdd:TIGR02168 796 EELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELI------- 868
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 840 DRLNKELEqigddsklALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAeknsgglSRLQDELQRLRQALQTSQAERDT 919
Cdd:TIGR02168 869 EELESELE--------ALLNERASLEEALALLRSELEELSEELRELESKR-------SELRRELEELREKLAQLELRLEG 933
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1614229825 920 ARLDKELLAQRLQGLEQ-EAENKKRFQDDKARQLKSLEEKVSRLEAELDE 968
Cdd:TIGR02168 934 LEVRIDNLQERLSEEYSlTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
349-1017 |
2.34e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 78.64 E-value: 2.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 349 QAELTRKMEELQKKldEEVKK----RQKLEPSRVGLERQLEE--KAEECHRLQE---LLERRKGEVQQSSKELQNMKLLL 419
Cdd:PTZ00121 1123 KAEDARKAEEARKA--EDARKaeeaRKAEDAKRVEIARKAEDarKAEEARKAEDakkAEAARKAEEVRKAEELRKAEDAR 1200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 420 GQEEGLRHGLEAQVKELQLKLKHSQSPDSGK-ESLLKDLLDTRELLEELLEGKQRVEEQLRLREreLTALKGALKEEVAS 498
Cdd:PTZ00121 1201 KAEAARKAEEERKAEEARKAEDAKKAEAVKKaEEAKKDAEEAKKAEEERNNEEIRKFEEARMAH--FARRQAAIKAEEAR 1278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 499 HDQEVEhvRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELL 578
Cdd:PTZ00121 1279 KADELK--KAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAA 1356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 579 QLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQVEELKK---ELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLA 655
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKkaeEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEA 1436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 656 ALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVAseteamvlgQRRATVETTLRETQEENDEFRRRILGLEQQLK 735
Cdd:PTZ00121 1437 KKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEA---------KKKAEEAKKADEAKKKAEEAKKKADEAKKAAE 1507
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 736 EARGLAEGGEAVEARLRDKVHRLEvEKQQLEEALNAarEEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALeeeg 815
Cdd:PTZ00121 1508 AKKKADEAKKAEEAKKADEAKKAE-EAKKADEAKKA--EEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMAL---- 1580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 816 KQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQmedykEKARKEVADAQRQAKDWASEAEKnsgg 895
Cdd:PTZ00121 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKA-----EEEKKKVEQLKKKEAEEKKKAEE---- 1651
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 896 lSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEE----KVSRLEAELDEEKN 971
Cdd:PTZ00121 1652 -LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAeekkKAEELKKAEEENKI 1730
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 1614229825 972 TVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKD 1017
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
622-1135 |
2.44e-14 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 78.16 E-value: 2.44e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 622 LRRTQGELKELQAEQQNQEVTGRHQN-QVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAM 700
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKDLHERlNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 701 VLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEAL-------NAAR 773
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLeecrvaaQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 774 EEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDs 853
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREE- 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 854 KLALQQLQAQMEDYKEKARKEVADAQR-QAKDWASEAEKNSGGlSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQ 932
Cdd:PRK02224 421 RDELREREAELEATLRTARERVEEAEAlLEAGKCPECGQPVEG-SPHVETIEEDRERVEELEAELEDLEEEVEEVEERLE 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 933 GLEQEAENKKRFQddkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDK---- 1008
Cdd:PRK02224 500 RAEDLVEAEDRIE--------RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAeear 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1009 ---ISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQA-----EEREKTVLQSTNRKLE------------- 1067
Cdd:PRK02224 572 eevAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREAlaelnDERRERLAEKRERKREleaefdearieea 651
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1614229825 1068 ----RRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQReLEEQHEVNEQLQA 1135
Cdd:PRK02224 652 redkERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERREALENRVEA-LEALYDEAEELES 722
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
344-1143 |
6.03e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 77.03 E-value: 6.03e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 344 KALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRvglerqleEKAEECHRLQELLERRKGevqqsskelqnmKLLLGQEE 423
Cdd:TIGR02169 174 KALEELEEVEENIERLDLIIDEKRQQLERLRRER--------EKAERYQALLKEKREYEG------------YELLKEKE 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 424 GLRHGLEAQVKELqlklkhsqspdSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKG-ALKEEVASHDQE 502
Cdd:TIGR02169 234 ALERQKEAIERQL-----------ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlRVKEKIGELEAE 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 503 VEhvrlQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRM 582
Cdd:TIGR02169 303 IA----SLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 583 EKEEMEEELGEkmevLQRDLEQArastrdTHQVEELKKELRRTQGELKELQAEQQNQevtgRHQNQVLEKQLAALREEAd 662
Cdd:TIGR02169 379 EFAETRDELKD----YREKLEKL------KREINELKRELDRLQEELQRLSEELADL----NAAIAGIEAKINELEEEK- 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 663 rgreleqqnlqlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAE 742
Cdd:TIGR02169 444 -----------------------EDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQAR 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 743 -------GGEAVEARLRDK---VHRLEVEKQQLEEALNAAREEEG----------NLAAAKRALEVRLDE---------- 792
Cdd:TIGR02169 501 aseervrGGRAVEEVLKASiqgVHGTVAQLGSVGERYATAIEVAAgnrlnnvvveDDAVAKEAIELLKRRkagratflpl 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 793 ----AQRGLARLGQEQQALNRAL---EEEGKQREALRRSKAE------LEEQKRLLN--RTVDRLNKELEQI-----GDD 852
Cdd:TIGR02169 581 nkmrDERRDLSILSEDGVIGFAVdlvEFDPKYEPAFKYVFGDtlvvedIEAARRLMGkyRMVTLEGELFEKSgamtgGSR 660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 853 SKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEaeknsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQ 932
Cdd:TIGR02169 661 APRGGILFSRSEPAELQRLRERLEGLKRELSSLQSE-------LRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEE 733
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 933 GLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR-----GRDQVDQLRTELMQERSARQDLECD 1007
Cdd:TIGR02169 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlearlSHSRIPEIQAELSKLEEEVSRIEAR 813
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1008 KISLERQNKDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI---DDERQHV 1084
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLE------KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALrdlESRLGDL 887
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 1614229825 1085 NDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD 1143
Cdd:TIGR02169 888 KKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEI 946
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
704-1141 |
5.01e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 73.92 E-value: 5.01e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 704 QRRATVET--TLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAA 781
Cdd:PRK02224 228 QREQARETrdEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDA 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 782 AKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQ 858
Cdd:PRK02224 308 DAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAReavEDRREEIE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 859 QLQAQMEDykekARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQ------------------------ 914
Cdd:PRK02224 388 ELEEEIEE----LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARerveeaealleagkcpecgqpveg 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 915 ------------------AERDTARLDKELLAQRLQGLEQEAENKKRFQddkarqlkSLEEKVSRLEAELDEEKNTVELL 976
Cdd:PRK02224 464 sphvetieedrerveeleAELEDLEEEVEEVEERLERAEDLVEAEDRIE--------RLEERREDLEELIAERRETIEEK 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 977 TDRVNRGRDQVDQLRTELMQERSARQDLECDK-------ISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERL 1049
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKREAAAEAEEEAeeareevAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKR 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1050 QAEEREKTVLQSTNRKLERRVKELSIQIDDER---------------QHVNDQKDQLTLRVKALKRQVDEAEEEIERLDS 1114
Cdd:PRK02224 616 EALAELNDERRERLAEKRERKRELEAEFDEARieearedkeraeeylEQVEEKLDELREERDDLQAEIGAVENELEELEE 695
|
490 500
....*....|....*....|....*..
gi 1614229825 1115 LRKKaQRELEEQHEVNEQLQARIKSLE 1141
Cdd:PRK02224 696 LRER-REALENRVEALEALYDEAEELE 721
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
711-1173 |
2.08e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 71.87 E-value: 2.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 711 TTLRETQEENDEFRRR------ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEkqQLEEALNAAREEEGNLAAAKR 784
Cdd:COG4913 235 DDLERAHEALEDAREQiellepIRELAERYAAARERLAELEYLRAALRLWFAQRRLE--LLEAELEELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 785 ALEVRLDEAQRglarlgQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQQLQ 861
Cdd:COG4913 313 RLEARLDALRE------ELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGlplPASAEEFAALR 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 862 AQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARldkELLAQRLQGLEQE---- 937
Cdd:COG4913 387 AEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALR---DALAEALGLDEAElpfv 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 938 ------AENKKRFQDDKARQLKSL-------EEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTE----------- 993
Cdd:COG4913 464 gelievRPEEERWRGAIERVLGGFaltllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDpdslagkldfk 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 994 -------LMQERSARQDLEC----------DK-ISLERQNKDLKTRLASseGFQKPSASLSQLESQN----QLLQERLQA 1051
Cdd:COG4913 544 phpfrawLEAELGRRFDYVCvdspeelrrhPRaITRAGQVKGNGTRHEK--DDRRRIRSRYVLGFDNraklAALEAELAE 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1052 EEREKTVLQSTNRKLERRVKELSIQ-------------------IDDERQHVNDQKDQLTL---RVKALKRQVDEAEEEI 1109
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERrealqrlaeyswdeidvasAEREIAELEAELERLDAssdDLAALEEQLEELEAEL 701
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229825 1110 ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEEFDNVYD 1173
Cdd:COG4913 702 EELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVER 765
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
762-1121 |
2.80e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.63 E-value: 2.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 762 KQQLEEALNAAREEEGNLAAakraLEVRLDEAQRGLARLGQEQQALNRALE----EEGKQREALRRSKAELEEQKRLLNR 837
Cdd:TIGR02168 171 KERRKETERKLERTRENLDR----LEDILNELERQLKSLERQAEKAERYKElkaeLRELELALLVLRLEELREELEELQE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 838 TVDRLNKELEQIGDDSKLALQQLQaQMEDYKEKARKEVADAQRQAKDWASEaeknsggLSRLQDELQRLRQALQTSQAER 917
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALANE-------ISRLEQQKQILRERLANLERQL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 918 DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQE 997
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 998 RSARQDLECDKISLERQNKDLKTrlassegfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQI 1077
Cdd:TIGR02168 399 NNEIERLEARLERLEDRRERLQQ--------EIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1614229825 1078 D---DERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1121
Cdd:TIGR02168 471 EeaeQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSG 517
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
347-1167 |
6.09e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 70.39 E-value: 6.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 347 AGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLE------EKAEECHRLQELLERRKGEVQQSSKELQNMKLLLG 420
Cdd:pfam02463 162 AAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELklkeqaKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 421 QEEGLRHGLEAQVKELQL------KLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKE 494
Cdd:pfam02463 242 LQELLRDEQEEIESSKQEiekeeeKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 495 EVASHDQEV----------EHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQ 564
Cdd:pfam02463 322 EKKKAEKELkkekeeieelEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKS 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 565 KNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARA-STRDTHQVEELKKELRRTQGELKELQAEQQNQEVTG 643
Cdd:pfam02463 402 EEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGkLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVK 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 644 RHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDC--EEASKAKVASETEAMVLGQRRATVETTLRETQEEND 721
Cdd:pfam02463 482 LQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRiiSAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVE 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 722 EFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLG 801
Cdd:pfam02463 562 ERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESA 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 802 QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQ 881
Cdd:pfam02463 642 KAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEE 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 882 AKDWASEAEKNSGGLsRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSR 961
Cdd:pfam02463 722 LLADRVQEAQDKINE-ELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQE 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 962 LEAELDEEKNTVELLTDRvnrgRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsaSLSQLESQ 1041
Cdd:pfam02463 801 EELRALEEELKEEAELLE----EEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEE-------EITKEELL 869
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1042 NQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1121
Cdd:pfam02463 870 QELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKE 949
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 1614229825 1122 ELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGLSSDEE 1167
Cdd:pfam02463 950 KEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDEL 995
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
759-1110 |
8.11e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.10 E-value: 8.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 759 EVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEG----KQREALRRSKAELEEQKRL 834
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGyellKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 835 LNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQ 914
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 915 AERDTARLDKELLAQRLQ-------GLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQV 987
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEeerkrrdKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 988 DQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLE 1067
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA------LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE 482
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1614229825 1068 RRVKELSIQIDDerqhVNDQKDQLTLRVKALKRQVDEAEEEIE 1110
Cdd:TIGR02169 483 KELSKLQRELAE----AEAQARASEERVRGGRAVEEVLKASIQ 521
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
857-1181 |
1.40e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.20 E-value: 1.40e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 857 LQQLQAQMEDYKEKARKevadaQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKELLAQRLQGLEQ 936
Cdd:COG1196 195 LGELERQLEPLERQAEK-----AERYRELKEELKELEAELLLLKLRELEAELEEL--EAELEELEAELEELEAELAELEA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 937 EAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNK 1016
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1017 DLKTRLASSEG-FQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRV 1095
Cdd:COG1196 348 EAEEELEEAEAeLAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELE 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1096 KALKRQVDEAEEEIERLDSlRKKAQRELEEQHEVNEQLQARIKS---LEKDAWRKASRSAAESALKQEGLSSDEEFDNVY 1172
Cdd:COG1196 428 EALAELEEEEEEEEEALEE-AAEEEAELEEEEEALLELLAELLEeaaLLEAALAELLEELAEAAARLLLLLEAEADYEGF 506
|
....*....
gi 1614229825 1173 DPSSIASLL 1181
Cdd:COG1196 507 LEGVKAALL 515
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
351-1190 |
2.14e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.61 E-value: 2.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 351 ELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAeecHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLE 430
Cdd:pfam15921 114 DLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTV---HELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIR 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 431 AQVKELQlklkhsqsPDSGKESLLKDLLDTRELLEELLEgkqrVEEQLRLRERELTALKG-------ALKEEVASHDQEV 503
Cdd:pfam15921 191 SILVDFE--------EASGKKIYEHDSMSTMHFRSLGSA----ISKILRELDTEISYLKGrifpvedQLEALKSESQNKI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 504 EHVRLQYQRDTEQLrrsMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQEllqlrme 583
Cdd:pfam15921 259 ELLLQQHQDRIEQL---ISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQ------- 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 584 keemeeelgekmevLQRDLEQARASTRDthQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREeadR 663
Cdd:pfam15921 329 --------------LRSELREAKRMYED--KIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHK---R 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 664 GRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEG 743
Cdd:pfam15921 390 EKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQ 469
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 744 GEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQR----- 818
Cdd:pfam15921 470 LESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRnvqte 549
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 819 -EALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlALQQLQAQMEdykekarKEVADAQRQAKDWASEAEKNSGGLS 897
Cdd:pfam15921 550 cEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAG-AMQVEKAQLE-------KEINDRRLELQEFKILKDKKDAKIR 621
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 898 RLQDELQRLR-QALQTSQAERDTARLDKELLAQRLQGLEQEAENKKrfqddkarQLKSLEEKVSRLEAELDEEKNTVELL 976
Cdd:pfam15921 622 ELEARVSDLElEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRN--------ELNSLSEDYEVLKRNFRNKSEEMETT 693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 977 TdrvNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGfqkpsaSLSQLESQNQLLQERLQAEEREK 1056
Cdd:pfam15921 694 T---NKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRG------QIDALQSKIQFLEEAMTNANKEK 764
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1057 TVLQSTNRKLERRVKELSIQ---IDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKaqrelEEQHEVNEQL 1133
Cdd:pfam15921 765 HFLKEEKNKLSQELSTVATEknkMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQR-----QEQESVRLKL 839
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 1614229825 1134 QARIKSLEKDAWRKASRSAAESALKQEGlSSDEEFDNVYDPSSIASLLTESNLQTSS 1190
Cdd:pfam15921 840 QHTLDVKELQGPGYTSNSSMKPRLLQPA-SFTRTHSNVPSSQSTASFLSHHSRKTNA 895
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
909-1161 |
3.96e-11 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 66.33 E-value: 3.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 909 ALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVD 988
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 989 QLRTELMQERSARQDLECDKISLERQNKDLktRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1068
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLA--LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1069 RVKELSIQIDDERQhvndqkdqltlRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKA 1148
Cdd:COG4942 172 ERAELEALLAELEE-----------ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
250
....*....|...
gi 1614229825 1149 SRSAAESALKQEG 1161
Cdd:COG4942 241 ERTPAAGFAALKG 253
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
749-984 |
9.90e-11 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.17 E-value: 9.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 749 ARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAEL 828
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 829 EEQKRLLNRTVDRLNK--ELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDwasEAEKNSGGLSRLQDELQRL 906
Cdd:COG4942 103 KEELAELLRALYRLGRqpPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA---ELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229825 907 RQALQTSQAERDTARLDKEllaQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGR 984
Cdd:COG4942 180 LAELEEERAALEALKAERQ---KLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGK 254
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
779-1000 |
1.06e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 64.79 E-value: 1.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 779 LAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGD---DSKL 855
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAelaELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 856 ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLE 935
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1614229825 936 QEAENKKRFQDDKARQLKSLE-------EKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSA 1000
Cdd:COG4942 171 AERAELEALLAELEEERAALEalkaerqKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
472-982 |
1.63e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 65.71 E-value: 1.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 472 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQ----RDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQR 547
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRgnggDRLEQLEREIERLERELEERERRRARLEALLAALGL 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 548 ELEETSEEtghwqsmFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQ---------ARASTRDTHQV--- 615
Cdd:COG4913 374 PLPASAEE-------FAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELREleaeiasleRRKSNIPARLLalr 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 616 EELKKELRRTQ------GELKELQAEQQNQE---------------VTGRHQNQVLEkqlaALREEADRGREleQQNLQL 674
Cdd:COG4913 447 DALAEALGLDEaelpfvGELIEVRPEEERWRgaiervlggfaltllVPPEHYAAALR----WVNRLHLRGRL--VYERVR 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 675 QKTLQQLRQDCEEAS-------KAKVASETEAMVLGQR--RATVET---------------------TLRETQEENDEFR 724
Cdd:COG4913 521 TGLPDPERPRLDPDSlagkldfKPHPFRAWLEAELGRRfdYVCVDSpeelrrhpraitragqvkgngTRHEKDDRRRIRS 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 725 RRILG---------LEQQLKEARGLAEGGEAVEARLRDKVHRLEvEKQQLEEALNAAREEEGNLAAAKRALE------VR 789
Cdd:COG4913 601 RYVLGfdnraklaaLEAELAELEEELAEAEERLEALEAELDALQ-ERREALQRLAEYSWDEIDVASAEREIAeleaelER 679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 790 LDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMedYKE 869
Cdd:COG4913 680 LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEER--FAA 757
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 870 KARKEVadAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtSQAERDTARLDKELLA-----QRLQGLEQE--AENKK 942
Cdd:COG4913 758 ALGDAV--ERELRENLEERIDALRARLNRAEEELERAMRAFN-REWPAETADLDADLESlpeylALLDRLEEDglPEYEE 834
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1614229825 943 RFQDdkaRQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 982
Cdd:COG4913 835 RFKE---LLNENSIEFVADLLSKLRRAIREIKERIDPLND 871
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
350-1126 |
3.47e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 64.61 E-value: 3.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 350 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGL 429
Cdd:pfam02463 198 QELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 430 EAQVKELQLKLKHSQSPdsgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEvashdqevEHVRLQ 509
Cdd:pfam02463 278 EKEKKLQEEELKLLAKE---EEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEEL--------EKELKE 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 510 YQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEE 589
Cdd:pfam02463 347 LEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKK 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 590 ELGEKMEVLQRDLEQARAS-TRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELE 668
Cdd:pfam02463 427 EELEILEEEEESIELKQGKlTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKAR 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 669 QQNLQLQKTLQQLRQDC--EEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEA 746
Cdd:pfam02463 507 SGLKVLLALIKDGVGGRiiSAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPK 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 747 VEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAA-------KRALEVRLDEAQRGLARLGQEQQALNRALEEEGK--Q 817
Cdd:pfam02463 587 LKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAkvvegilKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEvkA 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 818 REALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLS 897
Cdd:pfam02463 667 SLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKID 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 898 RLQDELQRLRQALQTSQAER-----DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNT 972
Cdd:pfam02463 747 EEEEEEEKSRLKKEEKEEEKselslKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQ 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 973 VELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAE 1052
Cdd:pfam02463 827 EEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEES 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1053 EREKTVLQSTNRKLERRVKELSIQIDDERQHVND-------------------QKDQLTLRVKALKRQVD---------- 1103
Cdd:pfam02463 907 QKLNLLEEKENEIEERIKEEAEILLKYEEEPEELlleeadekekeennkeeeeERNKRLLLAKEELGKVNlmaieefeek 986
|
810 820
....*....|....*....|....*...
gi 1614229825 1104 -----EAEEEIERLDSLRKKAQRELEEQ 1126
Cdd:pfam02463 987 eerynKDELEKERLEEEKKKLIRAIIEE 1014
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
353-1183 |
4.44e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 64.43 E-value: 4.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 353 TRKMEELQKKLDEEVK-----------------KRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNM 415
Cdd:pfam01576 1 TRQEEEMQAKEEELQKvkerqqkaeselkelekKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHEL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 416 KLLLGQEEGLRHGLEAQVKELQLKLK----HSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGA 491
Cdd:pfam01576 81 ESRLEEEEERSQQLQNEKKKMQQHIQdleeQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEER 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 492 LKEEVASHDQEVEHV------RLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQK 565
Cdd:pfam01576 161 ISEFTSNLAEEEEKAkslsklKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 566 NKEELRATKQELLQ---LRMEKEEMEEELGEKMEVLQRDLEQARAS-TRDTHQVEELKKELRRTQGELKE-LQAEQQNQE 640
Cdd:pfam01576 241 KEEELQAALARLEEetaQKNNALKKIRELEAQISELQEDLESERAArNKAEKQRRDLGEELEALKTELEDtLDTTAAQQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 641 VTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEN 720
Cdd:pfam01576 321 LRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAK 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 721 DEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARL 800
Cdd:pfam01576 401 QDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEE 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 801 GQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigdDSKLALQQLQA---QMEDYKEKARKEVAD 877
Cdd:pfam01576 481 TRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLS----DMKKKLEEDAGtleALEEGKKRLQRELEA 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 878 AQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQ-----TSQAERDTARLDkellaqrlQGLEQEAENKKRFQDDKARQL 952
Cdd:pfam01576 557 LTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDhqrqlVSNLEKKQKKFD--------QMLAEEKAISARYAEERDRAE 628
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 953 KSLEEKVSR---LEAELDEEKNTVELLtDRVNRgrdqvdQLRTELMQERSARQD-------LECDKISLERQNKDLKTRL 1022
Cdd:pfam01576 629 AEAREKETRalsLARALEEALEAKEEL-ERTNK------QLRAEMEDLVSSKDDvgknvheLERSKRALEQQVEEMKTQL 701
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1023 ASSEG-FQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRK-LERRVKELSIQIDDERQH---VNDQKDQLTLRVKA 1097
Cdd:pfam01576 702 EELEDeLQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRqLVKQVRELEAELEDERKQraqAVAAKKKLELDLKE 781
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1098 LKRQV-------DEAEEEIERLDSLRKKAQRELEEQHEVNEQLQA-------RIKSLEKDAWR-KASRSAAESALKQEGL 1162
Cdd:pfam01576 782 LEAQIdaankgrEEAVKQLKKLQAQMKDLQRELEEARASRDEILAqskesekKLKNLEAELLQlQEDLAASERARRQAQQ 861
|
890 900
....*....|....*....|.
gi 1614229825 1163 SSDEEFDNVYDPSSIASLLTE 1183
Cdd:pfam01576 862 ERDELADEIASGASGKSALQD 882
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
515-1112 |
6.94e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.78 E-value: 6.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 515 EQLRRSMQDATQDHAALEAERQKMSSL--VRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKeemeeelg 592
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLepIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEE-------- 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 593 ekmevLQRDLEQARASTRdthQVEELKKELRRTQGELKELQAEQQNQEVtgrhqnQVLEKQLAALREEADRGRELEQQNL 672
Cdd:COG4913 300 -----LRAELARLEAELE---RLEARLDALREELDELEAQIRGNGGDRL------EQLEREIERLERELEERERRRARLE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 673 qlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLR 752
Cdd:COG4913 366 -------------ALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 753 DKVHRLEVEKQQLEEALNAA-REEEGNLAAAKRALEVRLDEAQ---------RGLA-RLGQEQQALNRALE--EEGKQRE 819
Cdd:COG4913 433 RRKSNIPARLLALRDALAEAlGLDEAELPFVGELIEVRPEEERwrgaiervlGGFAlTLLVPPEHYAAALRwvNRLHLRG 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 820 ALRRSKAELEEQKRLLNRTVDR----------------LNKELEQIGD----DSKLALQQ------LQAQMedYKEKARK 873
Cdd:COG4913 513 RLVYERVRTGLPDPERPRLDPDslagkldfkphpfrawLEAELGRRFDyvcvDSPEELRRhpraitRAGQV--KGNGTRH 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 874 EVADAQRQAKDW---ASEAEKnsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDdkar 950
Cdd:COG4913 591 EKDDRRRIRSRYvlgFDNRAK----LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEID---- 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 951 qLKSLEEKVSRLEAELdeekntvelltDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAssegfqk 1030
Cdd:COG4913 663 -VASAEREIAELEAEL-----------ERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE------- 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1031 psaslsQLESQNQLLQERLQAEEREKTVLQSTNrkLERRVKELsiqidDERQHVNDQKDQLTLRVKALKRQVDEAEEEIE 1110
Cdd:COG4913 724 ------QAEEELDELQDRLEAAEDLARLELRAL--LEERFAAA-----LGDAVERELRENLEERIDALRARLNRAEEELE 790
|
..
gi 1614229825 1111 RL 1112
Cdd:COG4913 791 RA 792
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
694-1136 |
9.10e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.40 E-value: 9.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 694 ASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARG--LAEGGEAVEarlrdkvhRLEVEKQQLEEALNA 771
Cdd:COG4913 285 FAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAqiRGNGGDRLE--------QLEREIERLERELEE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 772 AREEEGNLAAAKRALEVRLDEAQRGLARLgqeQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigd 851
Cdd:COG4913 357 RERRRARLEALLAALGLPLPASAEEFAAL---RAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIA---- 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 852 dsklALQQLQAQMEDYKEKARKEVADA-----------------QRQAKDWASEAEK--NSGGLSRLQDELQ-------- 904
Cdd:COG4913 430 ----SLERRKSNIPARLLALRDALAEAlgldeaelpfvgelievRPEEERWRGAIERvlGGFALTLLVPPEHyaaalrwv 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 905 ---RLRQALQTSQAERDTARLD------------------------KELLAQR--------LQGLEQEA----------E 939
Cdd:COG4913 506 nrlHLRGRLVYERVRTGLPDPErprldpdslagkldfkphpfrawlEAELGRRfdyvcvdsPEELRRHPraitragqvkG 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 940 NKKRFQDDK--------------ARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTeLMQERSARQDLE 1005
Cdd:COG4913 586 NGTRHEKDDrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEIDVA 664
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1006 cdkiSLERQNKDLKTRLASsegFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKelsiQIDDERQHVN 1085
Cdd:COG4913 665 ----SAEREIAELEAELER---LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE----QAEEELDELQ 733
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 1614229825 1086 DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1136
Cdd:COG4913 734 DRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNR 784
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
787-1156 |
1.02e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.16 E-value: 1.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 787 EVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELeqigddsklaLQQLQAqMED 866
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYEL----------LKEKEA-LER 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 867 YKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTArldkelLAQRLQGLEQEAENKKRFQD 946
Cdd:TIGR02169 238 QKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR------VKEKIGELEAEIASLERSIA 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 947 DKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASse 1026
Cdd:TIGR02169 312 EKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD-- 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1027 gfqkpsaslsqlesqnqlLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTlrvkALKRQVDEAE 1106
Cdd:TIGR02169 390 ------------------YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN----ELEEEKEDKA 447
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229825 1107 EEI-------ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD-AWRKASRSAAESA 1156
Cdd:TIGR02169 448 LEIkkqewklEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRElAEAEAQARASEER 505
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
393-1142 |
1.45e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 62.76 E-value: 1.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 393 RLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESL---LKDLLDTRELLEELLE 469
Cdd:TIGR00606 190 TLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLknrLKEIEHNLSKIMKLDN 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 470 GKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQREL 549
Cdd:TIGR00606 270 EIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQ 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 550 EETS--EETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthqVEELKKELRRTQG 627
Cdd:TIGR00606 350 GRLQlqADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQL---CADLQSKERLKQE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 628 ELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEA-----MVL 702
Cdd:TIGR00606 427 QADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETlkkevKSL 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 703 GQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEaveaRLRDKVHRLEVE----------KQQLEEALNAA 772
Cdd:TIGR00606 507 QNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDE----QIRKIKSRHSDEltsllgyfpnKKQLEDWLHSK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 773 REEegnlaaaKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLlNRTVDRLNKELEQIGDD 852
Cdd:TIGR00606 583 SKE-------INQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDE-ESDLERLKEEIEKSSKQ 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 853 SKLaLQQLQAQMEDYKEKARKE------VADAQRQAKDWASEAEKNSGGLSRL-QDELQRLRQALQTSQAERDTARLDKE 925
Cdd:TIGR00606 655 RAM-LAGATAVYSQFITQLTDEnqsccpVCQRVFQTEAELQEFISDLQSKLRLaPDKLKSTESELKKKEKRRDEMLGLAP 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 926 LLAQRLQGLEQEA----ENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDR--VNRGRDQVDQLRTELMQERS 999
Cdd:TIGR00606 734 GRQSIIDLKEKEIpelrNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVtiMERFQMELKDVERKIAQQAA 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1000 ARQ----DLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLEsQNQLLQERLQAEEREKTVLQST---NRKLERRVKE 1072
Cdd:TIGR00606 814 KLQgsdlDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQE-QIQHLKSKTNELKSEKLQIGTNlqrRQQFEEQLVE 892
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1073 LSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEK 1142
Cdd:TIGR00606 893 LSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIEN 962
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
323-668 |
3.30e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 61.61 E-value: 3.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 323 RKVSLVLEQMQPLGMVSPASTKALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRK 402
Cdd:TIGR02168 646 RIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS 725
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 403 GEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRE 482
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAL 805
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 483 RELTALKGALKEEVASHDQEVEhvrlQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSM 562
Cdd:TIGR02168 806 DELRAELTLLNEEAANLRERLE----SLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNE 881
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 563 FQKNKEELRATKQELLQLRMEKEEMEEELGEkmevLQRDLEQARASTRDTH-QVEELKKELRRTQGELKELQaeQQNQEV 641
Cdd:TIGR02168 882 RASLEEALALLRSELEELSEELRELESKRSE----LRRELEELREKLAQLElRLEGLEVRIDNLQERLSEEY--SLTLEE 955
|
330 340
....*....|....*....|....*..
gi 1614229825 642 TGRHQNQVLEKQLAALREEADRGRELE 668
Cdd:TIGR02168 956 AEALENKIEDDEEEARRRLKRLENKIK 982
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
345-778 |
4.39e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.31 E-value: 4.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 345 ALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLER--QLEEKAEECHRLQELleRRKGEVQQSSKELQNMKLLLGQE 422
Cdd:PTZ00121 1382 AAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKadEAKKKAEEKKKADEA--KKKAEEAKKADEAKKKAEEAKKA 1459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 423 EGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRE--RELTALKGALKEEVASHD 500
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEeaKKADEAKKAEEAKKADEA 1539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 501 QEVEHVRLQYQ-RDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQ 579
Cdd:PTZ00121 1540 KKAEEKKKADElKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 580 LRMEKEEMEEELGEKMEVLQRDLEQARastRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALRE 659
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEEK---KKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK 1696
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 660 EADRGRELEQ--QNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRAtveTTLRETQEENDEFRRRILGLEQQLKEA 737
Cdd:PTZ00121 1697 EAEEAKKAEElkKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKA---EEAKKDEEEKKKIAHLKKEEEKKAEEI 1773
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1614229825 738 RGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGN 778
Cdd:PTZ00121 1774 RKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGG 1814
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
349-952 |
4.94e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 4.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 349 QAELTRKMEELQKKLDEEVKK----RQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEG 424
Cdd:PTZ00121 1310 KAEEAKKADEAKKKAEEAKKKadaaKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEE 1389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 425 LRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEEL-LEGKQRVEEQLRLRERELTALKGALKEEVASHDQEv 503
Cdd:PTZ00121 1390 KKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKaDEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEE- 1468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 504 ehvrlqyQRDTEQLRRSMQDATQ-DHAALEAERQKMSSlvRELQRELEETSEETGHWQSMFQKNKEELRAT--KQELLQL 580
Cdd:PTZ00121 1469 -------AKKADEAKKKAEEAKKaDEAKKKAEEAKKKA--DEAKKAAEAKKKADEAKKAEEAKKADEAKKAeeAKKADEA 1539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 581 RMEKEEMEEELGEKMEVLQ-----RDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLA 655
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKkaeekKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 656 ALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLK 735
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 736 EARGLAE--GGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaAKRALEVRLDEAQRGlaRLGQEQQALNRALEE 813
Cdd:PTZ00121 1700 EAKKAEElkKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED-----KKKAEEAKKDEEEKK--KIAHLKKEEEKKAEE 1772
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 814 EGKQREALrrSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKE---KARKEVADAQRQAKDWASEAE 890
Cdd:PTZ00121 1773 IRKEKEAV--IEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEmedSAIKEVADSKNMQLEEADAFE 1850
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1614229825 891 KNSGGLSRLQDElqrlrqalqTSQAERDTARlDKELLAQRLQGLEQEAENKKRFQDDKARQL 952
Cdd:PTZ00121 1851 KHKFNKNNENGE---------DGNKEADFNK-EKDLKEDDEEEIEEADEIEKIDKDDIEREI 1902
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
351-994 |
8.20e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.08 E-value: 8.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 351 ELTRKMEELQKKL--DEEVKKRQKlepsrvGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLR-- 426
Cdd:PRK03918 173 EIKRRIERLEKFIkrTENIEELIK------EKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEke 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 427 -HGLEAQVKELQLKLKHSQSPDSGKESLLKDLldtrelleellegKQRVEEQLRLRERELTALK-GALKEEVASHDQEVE 504
Cdd:PRK03918 247 lESLEGSKRKLEEKIRELEERIEELKKEIEEL-------------EEKVKELKELKEKAEEYIKlSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 505 HVRLQYQRDTEQLRRSMQDATQDhaalEAERQKMSSLVRELQRELEETSEetghwqsmFQKNKEELRATKQELLQLRMEK 584
Cdd:PRK03918 314 KRLSRLEEEINGIEERIKELEEK----EERLEELKKKLKELEKRLEELEE--------RHELYEEAKAKKEELERLKKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 585 EEMEEELgekmevLQRDLEqarastrdthQVEELKKELRRtqgELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRG 664
Cdd:PRK03918 382 TGLTPEK------LEKELE----------ELEKAKEEIEE---EISKITARIGELKKEIKELKKAIEELKKAKGKCPVCG 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 665 RELEqqnlqlqktlqqlrqdcEEASKAKVASETEAMvlgqrrATVETTLRETQEENDEFRRRILGLEQQLKEARGLaegg 744
Cdd:PRK03918 443 RELT-----------------EEHRKELLEEYTAEL------KRIEKELKEIEEKERKLRKELRELEKVLKKESEL---- 495
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 745 eaveARLRDKVHRLEvekqQLEEALNAAREEEgnLAAAKRALEvrldEAQRGLARLGQEQQALNRALEEEgkqrEALRRS 824
Cdd:PRK03918 496 ----IKLKELAEQLK----ELEEKLKKYNLEE--LEKKAEEYE----KLKEKLIKLKGEIKSLKKELEKL----EELKKK 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 825 KAELEEQKRLLNRTVDRLNKELEQIG----DDSKLALQQLQAQMEDYKE--KARKEVADAQRQAKDWASEAEKNSGGLSR 898
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEELGfesvEELEERLKELEPFYNEYLElkDAEKELEREEKELKKLEEELDKAFEELAE 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 899 LQDELQRLR---QALQTSQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTV 973
Cdd:PRK03918 638 TEKRLEELRkelEELEKKYSEEEYEELREEYleLSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE-KAKKELEKL 716
|
650 660
....*....|....*....|.
gi 1614229825 974 ELLTDRVNRGRDQVDQLRTEL 994
Cdd:PRK03918 717 EKALERVEELREKVKKYKALL 737
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
471-1080 |
2.00e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.98 E-value: 2.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 471 KQRVEEQLRLRERELTALKgalkEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELE 550
Cdd:pfam15921 266 QDRIEQLISEHEVEITGLT----EKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 551 ETSEETGHWQSMFQKNKEELRATKQELLQ---------------LRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQV 615
Cdd:pfam15921 342 DKIEELEKQLVLANSELTEARTERDQFSQesgnlddqlqklladLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRREL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 616 EELKKELRRTQGELKELQAEQQNQevtgrhqnqvLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVAS 695
Cdd:pfam15921 422 DDRNMEVQRLEALLKAMKSECQGQ----------MERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTL 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 696 ETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGE------------AVEARLRDKVHR------ 757
Cdd:pfam15921 492 ESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDhlrnvqtecealKLQMAEKDKVIEilrqqi 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 758 ----------------LEVEKQQLEEALNAAREEEGNLAAAK-------RALEVRLDEAQRGLARLGQEQQALNRALEEE 814
Cdd:pfam15921 572 enmtqlvgqhgrtagaMQVEKAQLEKEINDRRLELQEFKILKdkkdakiRELEARVSDLELEKVKLVNAGSERLRAVKDI 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 815 GKQREAL-------RRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARK-EVAD--AQRQAKD 884
Cdd:pfam15921 652 KQERDQLlnevktsRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSmEGSDghAMKVAMG 731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 885 WASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEA 964
Cdd:pfam15921 732 MQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEV 811
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 965 ELDEEKNTVELLTDRVNRGRDQVDQLRtelMQERSARQDLECDKISlerQNKDLKTRLASSEGFQKPSASLSQLESQNQL 1044
Cdd:pfam15921 812 ALDKASLQFAECQDIIQRQEQESVRLK---LQHTLDVKELQGPGYT---SNSSMKPRLLQPASFTRTHSNVPSSQSTASF 885
|
650 660 670
....*....|....*....|....*....|....*.
gi 1614229825 1045 LQERlqaEEREKTVLQSTNRKLERRVKELSIQIDDE 1080
Cdd:pfam15921 886 LSHH---SRKTNALKEDPTRDLKQLLQELRSVINEE 918
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
927-1141 |
2.03e-08 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 58.49 E-value: 2.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 927 LAQRLQGLEQEAENKKRFQDDkarQLKSLEEKVSRLEAELDE--EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDL 1004
Cdd:COG3206 162 LEQNLELRREEARKALEFLEE---QLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1005 ECDKISLERQ---NKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREktvLQSTNRKLERRVKELSIQIDDER 1081
Cdd:COG3206 239 EARLAALRAQlgsGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPD---VIALRAQIAALRAQLQQEAQRIL 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1614229825 1082 QHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKA---QRELEEQHEVNEQLQARIKSLE 1141
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQLEARLAELPELEAELrrlEREVEVARELYESLLQRLEEAR 378
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
515-999 |
2.45e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.51 E-value: 2.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 515 EQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEK 594
Cdd:PRK02224 254 ETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEC 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 595 MEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREE-ADRGRELEQQnlq 673
Cdd:PRK02224 334 RVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERfGDAPVDLGNA--- 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 674 lqktlqqlrqdceEASKAKVASETEAmvLGQRRATVETTLRETQEENDEFRR-----RILGLEQQLKE---ARGLAEGGE 745
Cdd:PRK02224 411 -------------EDFLEELREERDE--LREREAELEATLRTARERVEEAEAlleagKCPECGQPVEGsphVETIEEDRE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 746 AVE------ARLRDKVHRLEVEKQQLEEALNAAREEEgNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQRE 819
Cdd:PRK02224 476 RVEeleaelEDLEEEVEEVEERLERAEDLVEAEDRIE-RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 820 ALRRSKAELEEQKRLLNRTVDRLNKELEQIgDDSKLALQQLQAQMEDyKEKARKEVADAQRQAKDWaseAEKNSGGLSRL 899
Cdd:PRK02224 555 EKREAAAEAEEEAEEAREEVAELNSKLAEL-KERIESLERIRTLLAA-IADAEDEIERLREKREAL---AELNDERRERL 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 900 QDELQRLRQALQTSQAER-DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTVELLTD 978
Cdd:PRK02224 630 AEKRERKRELEAEFDEARiEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELE-ELRERREALENRVE 708
|
490 500
....*....|....*....|.
gi 1614229825 979 RVNRGRDQVDQLRTELMQERS 999
Cdd:PRK02224 709 ALEALYDEAEELESMYGDLRA 729
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
716-1074 |
2.78e-08 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 58.43 E-value: 2.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 716 TQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREeegNLAAAKRALevrldEAQR 795
Cdd:COG3096 276 HANERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASD---HLNLVQTAL-----RQQE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 796 GLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEqigdDSKLALQQLQAQMEDYKEkARKEV 875
Cdd:COG3096 348 KIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLA----DYQQALDVQQTRAIQYQQ-AVQAL 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 876 ADAQRQAKDWASEAEKNSGGLSRLQDELQR-------LRQALQTSQAER-----------------------DTAR---- 921
Cdd:COG3096 423 EKARALCGLPDLTPENAEDYLAAFRAKEQQateevleLEQKLSVADAARrqfekayelvckiageversqawQTARellr 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 922 --LDKELLAQRLQGLEQ---EAENKKRFQDDKARQLKSLEEKVSR-------LEAELDEEKNTVELLTDRVNRGRDQVDQ 989
Cdd:COG3096 503 ryRSQQALAQRLQQLRAqlaELEQRLRQQQNAERLLEEFCQRIGQqldaaeeLEELLAELEAQLEELEEQAAEAVEQRSE 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 990 LRTELMQERSARQDLEcDKISLERQNKDLKTRLASSEGfqKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERR 1069
Cdd:COG3096 583 LRQQLEQLRARIKELA-ARAPAWLAAQDALERLREQSG--EALADSQEVTAAMQQLLEREREATVERDELAARKQALESQ 659
|
....*
gi 1614229825 1070 VKELS 1074
Cdd:COG3096 660 IERLS 664
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
802-1138 |
4.25e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 57.72 E-value: 4.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 802 QEQQALNRALEEEGKQREalrRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlalqqlqaQMEDYKEKARKEVADAQRQ 881
Cdd:TIGR04523 303 QKEQDWNKELKSELKNQE---KKLEEIQNQISQNNKIISQLNEQISQLKKELT--------NSESENSEKQRELEEKQNE 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 882 AKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKV 959
Cdd:TIGR04523 372 IEKLKKENQSYKQEIKNLESQINDLESKIQ--NQEKLNQQKDEQIkkLQQEKELLEKEIERLKETIIKNNSEIKDLTNQD 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 960 SRLEAEL-------DEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPS 1032
Cdd:TIGR04523 450 SVKELIIknldntrESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1033 AS--------LSQLESQNQLLQERLQAEEREKTV---------LQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLR- 1094
Cdd:TIGR04523 530 ESekkekeskISDLEDELNKDDFELKKENLEKEIdeknkeieeLKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKe 609
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1614229825 1095 --VKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIK 1138
Cdd:TIGR04523 610 kkISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
542-964 |
6.05e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.08 E-value: 6.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 542 VRELQRELEETSEETGHWQsmfqKNKEELRATKQELLQLRMEKEEMEEElgekmevlQRDLEQARASTRDTHQVEELKKE 621
Cdd:COG4717 73 LKELEEELKEAEEKEEEYA----ELQEELEELEEELEELEAELEELREE--------LEKLEKLLQLLPLYQELEALEAE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 622 LRRTQGELKELQAEQQnQEVTGRHQNQVLEKQLAALREEADRgrELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMV 701
Cdd:COG4717 141 LAELPERLEELEERLE-ELRELEEELEELEAELAELQEELEE--LLEQLSLATEEELQDLAEELEELQQRLAELEEELEE 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 702 LGQRRATVETTLRETQEENDEFRRR---------------ILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLE 766
Cdd:COG4717 218 AQEELEELEEELEQLENELEAAALEerlkearlllliaaaLLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 767 EALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQkRLLNRTVDRLNKEL 846
Cdd:COG4717 298 ASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEE-LQLEELEQEIAALL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 847 EQIGDDSKLALQQLQAQMEDYKE-KARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKE 925
Cdd:COG4717 377 AEAGVEDEEELRAALEQAEEYQElKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELA 456
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1614229825 926 LLAQRLQGLE--QEAENKKRFQDDKARQLKSLEEKVSRLEA 964
Cdd:COG4717 457 ELEAELEQLEedGELAELLQELEELKAELRELAEEWAALKL 497
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
346-978 |
1.64e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 55.75 E-value: 1.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 346 LAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRL-----QELLERRKGEVQQSSKELQNMKLLLG 420
Cdd:TIGR00618 245 LTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAplaahIKAVTQIEQQAQRIHTELQSKMRSRA 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 421 QEEGLRHGLEAQVKELQLKLKHSQSPDSgKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHD 500
Cdd:TIGR00618 325 KLLMKRAAHVKQQSSIEEQRRLLQTLHS-QEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELD 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 501 QEVEHVRLQYQRDTEQlRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKE--ELRATKQELL 578
Cdd:TIGR00618 404 ILQREQATIDTRTSAF-RDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEreQQLQTKEQIH 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 579 QLRMEKEEMEEELGEKMEVLQRDL-EQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTgRHQNQVLEKQLAAL 657
Cdd:TIGR00618 483 LQETRKKAVVLARLLELQEEPCPLcGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDV-YHQLTSERKQRASL 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 658 REEADRGREleqqnlqlqktlqqlrqdcEEASKAKVASETEAMVLGQRRATVEttLRETQEENDEFRRRILGLEQQLKEA 737
Cdd:TIGR00618 562 KEQMQEIQQ-------------------SFSILTQCDNRSKEDIPNLQNITVR--LQDLTEKLSEAEDMLACEQHALLRK 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 738 RGLAEGGEAVEARLRDKVHRLEVEKQQLE-EALNAAREEEGNLAAAKRALEVR--------LDEAQRGLARLGQEQQALN 808
Cdd:TIGR00618 621 LQPEQDLQDVRLHLQQCSQELALKLTALHaLQLTLTQERVREHALSIRVLPKEllasrqlaLQKMQSEKEQLTYWKEMLA 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 809 RALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKEL----EQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAK- 883
Cdd:TIGR00618 701 QCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREdalnQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAEl 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 884 -DWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTAR-LDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSR 961
Cdd:TIGR00618 781 sHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILnLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQ 860
|
650
....*....|....*..
gi 1614229825 962 LEAELDEEKNTVELLTD 978
Cdd:TIGR00618 861 LAQLTQEQAKIIQLSDK 877
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
704-1128 |
1.66e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.54 E-value: 1.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 704 QRRATVETTLRETQEENDEFRRRILGLEQQLkEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREeegnlaaaK 783
Cdd:COG4717 95 EELEELEEELEELEAELEELREELEKLEKLL-QLLPLYQELEALEAELAELPERLEELEERLEELRELEEE--------L 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 784 RALEVRLDEAQRGLARLGQEQQALNR-ALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQA 862
Cdd:COG4717 166 EELEAELAELQEELEELLEQLSLATEeELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERL 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 863 QMEDYKEKARKEVADAQRQAKDWASEAEKNSG--------------GLSRLQDELQRLRQALQTSQAERDTARLDKELLA 928
Cdd:COG4717 246 KEARLLLLIAAALLALLGLGGSLLSLILTIAGvlflvlgllallflLLAREKASLGKEAEELQALPALEELEEEELEELL 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 929 QRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdk 1008
Cdd:COG4717 326 AALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQE------ 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1009 isLERQNKDLKTRLASSEGFQKPSA---SLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQidderqhvn 1085
Cdd:COG4717 400 --LKEELEELEEQLEELLGELEELLealDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEED--------- 468
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1614229825 1086 DQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHE 1128
Cdd:COG4717 469 GELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYRE 511
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
530-1154 |
2.11e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 2.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 530 ALEAERQKMSSLVRELQRELEETSEETghwqSMFQKNKEELRATKQELLQLRMEKEEMEEELgekmevlqRDLEQARAST 609
Cdd:PRK03918 197 EKEKELEEVLREINEISSELPELREEL----EKLEKEVKELEELKEEIEELEKELESLEGSK--------RKLEEKIREL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 610 RDthQVEELKK---ELRRTQGELKELQAEQQNQEVTGRHQNQVLEKqLAALREEADRGRELEQQNLQLQKTLQQLRQDCE 686
Cdd:PRK03918 265 EE--RIEELKKeieELEEKVKELKELKEKAEEYIKLSEFYEEYLDE-LREIEKRLSRLEEEINGIEERIKELEEKEERLE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 687 EASKAKVASETEAMVLGQRRATVETtLRETQEENDEFRRRILG-----LEQQLKEARGLAEGGEAVEARLRDKVHRLEVE 761
Cdd:PRK03918 342 ELKKKLKELEKRLEELEERHELYEE-AKAKKEELERLKKRLTGltpekLEKELEELEKAKEEIEEEISKITARIGELKKE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 762 KQQLEEALNAAREEEGNLAAAKRalevRLDEAQRGlarlgqeqqalnRALEEEGKQREALRRSKAELEEQKRLLNRTVDR 841
Cdd:PRK03918 421 IKELKKAIEELKKAKGKCPVCGR----ELTEEHRK------------ELLEEYTAELKRIEKELKEIEEKERKLRKELRE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 842 LNKELEQIGDDSKL--ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLrQALQTSqaerdt 919
Cdd:PRK03918 485 LEKVLKKESELIKLkeLAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKL-EELKKK------ 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 920 arldKELLAQRLQGLEQE-AENKKRFQDDKARQLKSLEEKVSRLEaELDEEKNTVELLTDRVNRGRDQVDQLRTELMQER 998
Cdd:PRK03918 558 ----LAELEKKLDELEEElAELLKELEELGFESVEELEERLKELE-PFYNEYLELKDAEKELEREEKELKKLEEELDKAF 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 999 SARQDLECDKISLERQNKDLKtRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELsiqid 1078
Cdd:PRK03918 633 EELAETEKRLEELRKELEELE-KKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER----- 706
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229825 1079 derqhvndqkdqltlrvkalkrqvDEAEEEIERLdslrKKAQRELEEQHEVNEQLQArikSLEKDAWRKASRSAAE 1154
Cdd:PRK03918 707 ------------------------EKAKKELEKL----EKALERVEELREKVKKYKA---LLKERALSKVGEIASE 751
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
350-1142 |
3.42e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.98 E-value: 3.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 350 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRH-- 427
Cdd:pfam02463 236 EERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEek 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 428 --GLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKG----ALKEEVASHDQ 501
Cdd:pfam02463 316 lkESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKleseRLSSAAKLKEE 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 502 EVEHVRLQYQRDTEQLRRSMQDATqdhaALEAERQKMSSLVRELQRELEETSEEtghwQSMFQKNKEELRATKQELLQLR 581
Cdd:pfam02463 396 ELELKSEEEKEAQLLLELARQLED----LLKEEKKEELEILEEEEESIELKQGK----LTEEKEELEKQELKLLKDELEL 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 582 MEKEEMEEELGEKMEVLQRDLEQARAstrdthQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEA 661
Cdd:pfam02463 468 KKSEDLLKETQLVKLQEQLELLLSRQ------KLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENY 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 662 DRGRELEqqnlqlQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLA 741
Cdd:pfam02463 542 KVAISTA------VIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEA 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 742 EGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREAL 821
Cdd:pfam02463 616 DEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEIL 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 822 RRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRqakdwaSEAEKNSGGLSRLQD 901
Cdd:pfam02463 696 RRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEK------SRLKKEEKEEEKSEL 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 902 ELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVN 981
Cdd:pfam02463 770 SLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLE 849
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 982 RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKpSASLSQLESQNQLLQERLQAEEREKTVLQS 1061
Cdd:pfam02463 850 KLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEE-KKELEEESQKLNLLEEKENEIEERIKEEAE 928
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1062 TNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1141
Cdd:pfam02463 929 ILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
.
gi 1614229825 1142 K 1142
Cdd:pfam02463 1009 R 1009
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
380-849 |
4.31e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.39 E-value: 4.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 380 LERQLEEKAEECHRLQ----ELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLK 455
Cdd:COG4717 47 LLERLEKEADELFKPQgrkpELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 456 --DLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEA 533
Cdd:COG4717 127 llPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 534 ERQKMSSLVRELQRELEETSEETGHWQS--MFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRD 611
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEQLENelEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 612 THQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKA 691
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 692 KVASETEAMvLGQRRATVETTLRETQEENDEF---RRRILGLEQQLKEARG--LAEGGEAVEARLRDKVHRLEVEKQQLE 766
Cdd:COG4717 367 ELEQEIAAL-LAEAGVEDEEELRAALEQAEEYqelKEELEELEEQLEELLGelEELLEALDEEELEEELEELEEELEELE 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 767 EALNAAREEEGNLAAAKRALevrldEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEE-QKRLLNRTVDRLNKE 845
Cdd:COG4717 446 EELEELREELAELEAELEQL-----EEDGELAELLQELEELKAELRELAEEWAALKLALELLEEaREEYREERLPPVLER 520
|
....
gi 1614229825 846 LEQI 849
Cdd:COG4717 521 ASEY 524
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
797-1126 |
5.02e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 54.26 E-value: 5.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 797 LARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQigddSKLALQQLQAQMEDYKEkARKEVA 876
Cdd:TIGR04523 147 IKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLK----LELLLSNLKKKIQKNKS-LESQIS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 877 DAQRQAKDWASEAEKnsgglsrLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLE 956
Cdd:TIGR04523 222 ELKKQNNQLKDNIEK-------KQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLK 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 957 EKVSRLE------------AELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLAS 1024
Cdd:TIGR04523 295 SEISDLNnqkeqdwnkelkSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEK 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1025 -SEGFQKPSASLSQLESQNQLLQERLQAEEREKT-------VLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ---LTL 1093
Cdd:TIGR04523 375 lKKENQSYKQEIKNLESQINDLESKIQNQEKLNQqkdeqikKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQdsvKEL 454
|
330 340 350
....*....|....*....|....*....|...
gi 1614229825 1094 RVKALKRQVDEAEEEIERLDSLRKKAQRELEEQ 1126
Cdd:TIGR04523 455 IIKNLDNTRESLETQLKVLSRSINKIKQNLEQK 487
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
350-831 |
7.53e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.53 E-value: 7.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 350 AELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQEL------LERRKGEVQQSSKELQNMKLLLGQEE 423
Cdd:PRK03918 241 EELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELkekaeeYIKLSEFYEEYLDELREIEKRLSRLE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 424 GLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEV 503
Cdd:PRK03918 321 EEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAK 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 504 EHVRLQYQRDTEQLRRSMQDATQDHAA---LEAERQKMSSLVRELQRE-----LEETSEETGHWQSMFQKNKEELRATKQ 575
Cdd:PRK03918 401 EEIEEEISKITARIGELKKEIKELKKAieeLKKAKGKCPVCGRELTEEhrkelLEEYTAELKRIEKELKEIEEKERKLRK 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 576 ELLQLRMEKEEMEEELGEKMEVLQ-RDLEQARAS------TRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQ 648
Cdd:PRK03918 481 ELRELEKVLKKESELIKLKELAEQlKELEEKLKKynleelEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAE 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 649 VLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVA---SETEAMVLGQRRATVETTLRETQEENDEFRR 725
Cdd:PRK03918 561 LEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLElkdAEKELEREEKELKKLEEELDKAFEELAETEK 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 726 RILGLEQQLKEARglAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEaqrgLARLGQEQQ 805
Cdd:PRK03918 641 RLEELRKELEELE--KKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEE----REKAKKELE 714
|
490 500
....*....|....*....|....*.
gi 1614229825 806 ALNRALEEEGKQREALRRSKAELEEQ 831
Cdd:PRK03918 715 KLEKALERVEELREKVKKYKALLKER 740
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
608-973 |
1.09e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.15 E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 608 STRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEE 687
Cdd:TIGR02169 669 SRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSS 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 688 ASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRIL--GLEQQLKEARGLAEGGEAVEARLRD---KVHRLEVEK 762
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLShsRIPEIQAELSKLEEEVSRIEARLREieqKLNRLTLEK 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 763 QQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRL 842
Cdd:TIGR02169 829 EYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL 908
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 843 NKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADaqrqakdwaSEAEKNSGGLSRLQDELQRLRQALQTsqaerdtarl 922
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED---------EEIPEEELSLEDVQAELQRVEEEIRA---------- 969
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1614229825 923 dkeLLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLE--AELDEEKNTV 973
Cdd:TIGR02169 970 ---LEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILEriEEYEKKKREV 1019
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
432-1074 |
1.15e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 53.30 E-value: 1.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 432 QVKELQLKLKHSQSPDSGKESLLKDLLDTRELleelleGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQ 511
Cdd:pfam12128 252 TLESAELRLSHLHFGYKSDETLIASRQEERQE------TSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELE 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 512 RDTEQLRRsMQDATQDHAALEAE-----RQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELratKQELLQLRMEKEE 586
Cdd:pfam12128 326 ALEDQHGA-FLDADIETAAADQEqlpswQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQN---NRDIAGIKDKLAK 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 587 MEEELGEKMEVLQRDLEQARASTRDTH-----QVEELKKELRRTQGELKELQAEQQ--NQEVTGRHQNQVL-----EKQL 654
Cdd:pfam12128 402 IREARDRQLAVAEDDLQALESELREQLeagklEFNEEEYRLKSRLGELKLRLNQATatPELLLQLENFDERierarEEQE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 655 AALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQL 734
Cdd:pfam12128 482 AANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKVISPELLH 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 735 K-----EARGLAEGGEAVEARLRDKVHRLEV------------EKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGL 797
Cdd:pfam12128 562 RtdldpEVWDGSVGGELNLYGVKLDLKRIDVpewaaseeelreRLDKAEEALQSAREKQAAAEEQLVQANGELEKASREE 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 798 --ARLGQEQQALNRALEEEGKQREALRRSKAeLEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDY---KEKAR 872
Cdd:pfam12128 642 tfARTALKNARLDLRRLFDEKQSEKDKKNKA-LAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREArteKQAYW 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 873 KEVA---DAQRQAKDWASEAEKnsgglSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKA 949
Cdd:pfam12128 721 QVVEgalDAQLALLKAAIAARR-----SGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVL 795
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 950 RQLKSLEEKVS----RLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASS 1025
Cdd:pfam12128 796 RYFDWYQETWLqrrpRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATL 875
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1614229825 1026 EGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELS 1074
Cdd:pfam12128 876 KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADHS 924
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
735-1156 |
1.19e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.04 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 735 KEARGLAEGGEAVEARLRDKVHRLEVEKQQLEE---ALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQA----- 806
Cdd:PRK04863 279 NERRVHLEEALELRRELYTSRRQLAAEQYRLVEmarELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERYqadle 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 807 -LNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLnkeleqigddsklalqqlQAQMEDYKEK--ARKEVADAQRQAK 883
Cdd:PRK04863 359 eLEERLEEQNEVVEEADEQQEENEARAEAAEEEVDEL------------------KSQLADYQQAldVQQTRAIQYQQAV 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 884 DWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDkelLAQRLQgleqEAENKKRfQDDKARQL-KSLEEKVSRL 962
Cdd:PRK04863 421 QALERAKQLCGLPDLTADNAEDWLEEFQAKEQEATEELLS---LEQKLS----VAQAAHS-QFEQAYQLvRKIAGEVSRS 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 963 EA-----ELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdkiSLERQNKDLKTRLASSEGFQkpsaslsQ 1037
Cdd:PRK04863 493 EAwdvarELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAER-------LLAEFCKRLGKNLDDEDELE-------Q 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1038 LESQNQLLQERLQAEEREKTVLQSTnrkLERRVKELSIQIDDERQHVnDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1117
Cdd:PRK04863 559 LQEELEARLESLSESVSEARERRMA---LRQQLEQLQARIQRLAARA-PAWLAAQDALARLREQSGEEFEDSQDVTEYMQ 634
|
410 420 430
....*....|....*....|....*....|....*....
gi 1614229825 1118 KAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESA 1156
Cdd:PRK04863 635 QLLERERELTVERDELAARKQALDEEIERLSQPGGSEDP 673
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
604-833 |
2.16e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 604 QARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQ 683
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 684 DcEEASKAKVASETEAMVLGQRRATVETTLRetQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQ 763
Cdd:COG4942 98 E-LEAQKEELAELLRALYRLGRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 764 QLEEALNAAREEegnlaaaKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKR 833
Cdd:COG4942 175 ELEALLAELEEE-------RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
564-1142 |
2.83e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.60 E-value: 2.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 564 QKNKEELRATKQELLQLRMEKEEMEEELGekmevlqrdlEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTG 643
Cdd:PRK03918 168 GEVIKEIKRRIERLEKFIKRTENIEELIK----------EKEKELEEVLREINEISSELPELREELEKLEKEVKELEELK 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 644 RHQNQvLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEasKAKVASETEAmvlgqrratVETTLRETQEENDEF 723
Cdd:PRK03918 238 EEIEE-LEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEE--KVKELKELKE---------KAEEYIKLSEFYEEY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 724 RRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVrLDEAQRGLARLGqe 803
Cdd:PRK03918 306 LDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAK-KEELERLKKRLT-- 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 804 qqalNRALEEEGKQREALRRSKAELEEQKRLLNRTVdrlnKELEQIGDDSKLALQQLQaqmedyKEKARKEVADAQRQAK 883
Cdd:PRK03918 383 ----GLTPEKLEKELEELEKAKEEIEEEISKITARI----GELKKEIKELKKAIEELK------KAKGKCPVCGRELTEE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 884 DWASEAEKNSGGLSRLQDELQRLRQALqtSQAERDTARLDKELLAQR-----LQGLEQEAENKKRFQDDKARQLKSLEEK 958
Cdd:PRK03918 449 HRKELLEEYTAELKRIEKELKEIEEKE--RKLRKELRELEKVLKKESeliklKELAEQLKELEEKLKKYNLEELEKKAEE 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 959 VSRLEAELDEEKNTVELLTDRVNRGRDqvdqLRTELMQERSARQDLECDKISLERQ--------NKDLKTRLASSEGFQK 1030
Cdd:PRK03918 527 YEKLKEKLIKLKGEIKSLKKELEKLEE----LKKKLAELEKKLDELEEELAELLKEleelgfesVEELEERLKELEPFYN 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1031 PSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQK-DQLTLRVKALKRQVDEAEEEI 1109
Cdd:PRK03918 603 EYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyEELREEYLELSRELAGLRAEL 682
|
570 580 590
....*....|....*....|....*....|....*.
gi 1614229825 1110 ERLDSLR---KKAQRELEEQHEVNEQLQARIKSLEK 1142
Cdd:PRK03918 683 EELEKRReeiKKTLEKLKEELEEREKAKKELEKLEK 718
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
472-937 |
3.29e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.31 E-value: 3.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 472 QRVEEQLRLRERELTALKgALKEEVASHDQEVEHVRLQYQRDTEQLRRsmQDATQDHAALEAERQKMSSLVRELQRELEE 551
Cdd:COG4717 74 KELEEELKEAEEKEEEYA-ELQEELEELEEELEELEAELEELREELEK--LEKLLQLLPLYQELEALEAELAELPERLEE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 552 TSEETGHWQSMfqknKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthQVEELKKELRRTQGELKE 631
Cdd:COG4717 151 LEERLEELREL----EEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQ--RLAELEEELEEAQEELEE 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 632 LQAEQQNQEVTGRHQnqvlekqlaalrEEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVET 711
Cdd:COG4717 225 LEEELEQLENELEAA------------ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 712 TLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGnlAAAKRALEVRLD 791
Cdd:COG4717 293 LAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE--LEEELQLEELEQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 792 EAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQkrLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEK- 870
Cdd:COG4717 371 EIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQ--LEELLGELEELLEALDEEELEEELEELEEELEELEEEl 448
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1614229825 871 --ARKEVADAQRQAKDWASEAEknsggLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQE 937
Cdd:COG4717 449 eeLREELAELEAELEQLEEDGE-----LAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
817-1126 |
3.58e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 51.45 E-value: 3.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 817 QREALRRSKAELEEQKRLlnrtVDRLNKELEQIG--DDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSG 894
Cdd:PRK11281 44 QLDALNKQKLLEAEDKLV----QQDLEQTLALLDkiDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 895 GLS--RLQDELQRLRQALQTSQAERDTARldkellaqrlqgleqeaenkkrfqddkaRQLKSLEEKVSRLEAELDEEKNT 972
Cdd:PRK11281 120 TLSlrQLESRLAQTLDQLQNAQNDLAEYN----------------------------SQLVSLQTQPERAQAALYANSQR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 973 VELLTDRVNRGRDQVDQLRTELMQERSARQDLecdkisLERQNKDLKTRLASSEGFQK--------PSASLSQLESQNQL 1044
Cdd:PRK11281 172 LQQIRNLLKGGKVGGKALRPSQRVLLQAEQAL------LNAQNDLQRKSLEGNTQLQDllqkqrdyLTARIQRLEHQLQL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1045 LQERLQA---EEREKTVLQSTNRKLERR-------VKELSI--QIDDERQHVNDQKDQLT---LRVKalkrqvdeaeeei 1109
Cdd:PRK11281 246 LQEAINSkrlTLSEKTVQEAQSQDEAARiqanplvAQELEInlQLSQRLLKATEKLNTLTqqnLRVK------------- 312
|
330
....*....|....*..
gi 1614229825 1110 ERLDSLrKKAQRELEEQ 1126
Cdd:PRK11281 313 NWLDRL-TQSERNIKEQ 328
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
654-922 |
5.53e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 5.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 654 LAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQ 733
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 734 LKEARGlaeggeavearlrdkvhRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEE 813
Cdd:COG4942 92 IAELRA-----------------ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 814 EGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQigddsklaLQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNS 893
Cdd:COG4942 155 LRADLAELAALRAELEAERAELEALLAELEEERAA--------LEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
250 260
....*....|....*....|....*....
gi 1614229825 894 GGLSRLQDELQRLRQALQTSQAERDTARL 922
Cdd:COG4942 227 ALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1050-1166 |
5.89e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 50.63 E-value: 5.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1050 QAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ---LTLRVKALKRQVDE---AEEEIERLDSLRKKAQREL 1123
Cdd:COG2433 402 EHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierLERELSEARSEERReirKDREISRLDREIERLEREL 481
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1614229825 1124 EEQHEVNEQLQARIKSLeKDAWRKASRSAAESALKQEGLSSDE 1166
Cdd:COG2433 482 EEERERIEELKRKLERL-KELWKLEHSGELVPVKVVEKFTKEA 523
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
856-1114 |
6.16e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 6.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 856 ALQQLQAQMEDYKEkARKEVADAQRQAKDWAseaeknsgGLSRLQDELQRLRQALQTSQAERDTARLDKEllAQRLQGLE 935
Cdd:COG4913 226 AADALVEHFDDLER-AHEALEDAREQIELLE--------PIRELAERYAAARERLAELEYLRAALRLWFA--QRRLELLE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 936 QEAENkkrfqddkarqlksLEEKVSRLEAELDEekntvelLTDRVNRGRDQVDQLRTELMQerSARQDLEcdkiSLERQN 1015
Cdd:COG4913 295 AELEE--------------LRAELARLEAELER-------LEARLDALREELDELEAQIRG--NGGDRLE----QLEREI 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1016 KDLKTRLASSEgfqkpsASLSQLESQNQLLQERLQAEEREKTVLQstnrkleRRVKELSIQIDDERQHVNDQKDQLTLRV 1095
Cdd:COG4913 348 ERLERELEERE------RRRARLEALLAALGLPLPASAEEFAALR-------AEAAALLEALEEELEALEEALAEAEAAL 414
|
250
....*....|....*....
gi 1614229825 1096 KALKRQVDEAEEEIERLDS 1114
Cdd:COG4913 415 RDLRRELRELEAEIASLER 433
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
715-1148 |
6.90e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.45 E-value: 6.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 715 ETQEENDEFRRRILGLEQQLKEARGLAEggeaVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRAL------EV 788
Cdd:PRK03918 142 ESDESREKVVRQILGLDDYENAYKNLGE----VIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREIneisseLP 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 789 RLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQigddsklaLQQLQAQMEDYK 868
Cdd:PRK03918 218 ELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEE--------LEEKVKELKELK 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 869 EKARK--EVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAE--NKKRF 944
Cdd:PRK03918 290 EKAEEyiKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHElyEEAKA 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 945 QDDKARQLKSLE--EKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLkTRL 1022
Cdd:PRK03918 370 KKEELERLKKRLtgLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGREL-TEE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1023 ASSEGFQKPSASLSQLESQNQLLQERLqaeerektvlqstnRKLERRVKELSIQIDDERQhvndqkdqlTLRVKALKRQV 1102
Cdd:PRK03918 449 HRKELLEEYTAELKRIEKELKEIEEKE--------------RKLRKELRELEKVLKKESE---------LIKLKELAEQL 505
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1614229825 1103 DEAEEEIERLDSLR-KKAQRELEEQHEVNEQLQARIKSLEKDAWRKA 1148
Cdd:PRK03918 506 KELEEKLKKYNLEElEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE 552
|
|
| MutS2 |
COG1193 |
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair]; |
799-942 |
7.69e-06 |
|
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair];
Pssm-ID: 440806 [Multi-domain] Cd Length: 784 Bit Score: 50.14 E-value: 7.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 799 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgddsKLALQQLQAQMEDYKEKARKEVADA 878
Cdd:COG1193 494 RLGLPEEIIERARELLGEESIDVEKLIEELERERRELEEEREEAERLREEL----EKLREELEEKLEELEEEKEEILEKA 569
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229825 879 QRQAKDWASEAEKnsgglsrlqdELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK 942
Cdd:COG1193 570 REEAEEILREARK----------EAEELIRELREAQAEEEELKEARKKLEELKQELEEKLEKPK 623
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
765-1161 |
1.04e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 49.51 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 765 LEEALNAAREEEGNLAAAKRA--LEVRLDEAQRGLARLGQEQQALNRALEEEgkqREALRRSKAELEEQKRLLNRTVDRL 842
Cdd:pfam07888 9 LEEESHGEEGGTDMLLVVPRAelLQNRLEECLQERAELLQAQEAANRQREKE---KERYKRDREQWERQRRELESRVAEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 843 NKELEQIGDD-SKLALQQLQAQMEDYKEKARKEVADAQRQA------------KDWASEAEKNSGGLSRLQDELQRLRQA 909
Cdd:pfam07888 86 KEELRQSREKhEELEEKYKELSASSEELSEEKDALLAQRAAhearireleediKTLTQRVLERETELERMKERAKKAGAQ 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 910 LQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRL----------EAELDEEKNTVELLTDR 979
Cdd:pfam07888 166 RKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLtqklttahrkEAENEALLEELRSLQER 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 980 VNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASsegfqkpsASLSQLESQNQLLQER---LQAEEREK 1056
Cdd:pfam07888 246 LNASERKVEGLGEELSSMAAQRDRTQAELHQARLQAAQLTLQLAD--------ASLALREGRARWAQERetlQQSAEADK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1057 TVLQSTNRKLERRVKELSiqidDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1136
Cdd:pfam07888 318 DRIEKLSAELQRLEERLQ----EERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEY 393
|
410 420
....*....|....*....|....*
gi 1614229825 1137 IKSLEKDAWRKASRSAAESALKQEG 1161
Cdd:pfam07888 394 IRQLEQRLETVADAKWSEAALTSTE 418
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
564-924 |
1.26e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 564 QKNKEELRATKQELLQLRmekeemeeelgekmevlqRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTG 643
Cdd:COG4913 606 FDNRAKLAALEAELAELE------------------EELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAE 667
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 644 RHQNQvLEKQLAALREEADRGRELEQQNLQLQKTLqqlrqdcEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEF 723
Cdd:COG4913 668 REIAE-LEAELERLDASSDDLAALEEQLEELEAEL-------EELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA 739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 724 RRRILGLEQQLKEARGLAEGGEAVEARLRDkvhRLEVEKQQLEEALNAAREE-EGNLAAAKRALEVRLDEAQRGLARLGq 802
Cdd:COG4913 740 EDLARLELRALLEERFAAALGDAVERELRE---NLEERIDALRARLNRAEEElERAMRAFNREWPAETADLDADLESLP- 815
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 803 EQQALNRALEEEG------KQREALRRS--------KAELEEQKRLLNRTVDRLNKELEQI--GDDSKLALqqlqaqmeD 866
Cdd:COG4913 816 EYLALLDRLEEDGlpeyeeRFKELLNENsiefvadlLSKLRRAIREIKERIDPLNDSLKRIpfGPGRYLRL--------E 887
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1614229825 867 YKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQ-DELQRLRQALQTSQAERDTARLDK 924
Cdd:COG4913 888 ARPRPDPEVREFRQELRAVTSGASLFDEELSEARfAALKRLIERLRSEEEESDRRWRAR 946
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
862-1151 |
1.61e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 862 AQMEDYKEKARKEVAdaqrqakdwasEAEKNSGGLSRLQDELqrlRQALQTSQAERDTARLDKELLAQRlqgleQEAENK 941
Cdd:TIGR02169 166 AEFDRKKEKALEELE-----------EVEENIERLDLIIDEK---RQQLERLRREREKAERYQALLKEK-----REYEGY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 942 KRFQDDKA--RQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQdlecdkISLERQNKDLK 1019
Cdd:TIGR02169 227 ELLKEKEAleRQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQ------LRVKEKIGELE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1020 TRLASSEGfqkpsaSLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIqidderqhvndQKDQLTLRVKALK 1099
Cdd:TIGR02169 301 AEIASLER------SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK-----------RRDKLTEEYAELK 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1614229825 1100 RQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRS 1151
Cdd:TIGR02169 364 EELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEEL 415
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
702-926 |
2.03e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 2.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 702 LGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARgLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAA 781
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFR-QKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 782 AKRALEVRLDEAQR-----GLARLGQEQQALNRALEEE----GKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDD 852
Cdd:COG3206 245 LRAQLGSGPDALPEllqspVIQQLRAQLAELEAELAELsaryTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEA 324
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229825 853 SKLALQQLQAQMEDYKEKArKEVADAQRQakdwaseaeknsggLSRLQDELQRLRQALQTSQAERDTARLDKEL 926
Cdd:COG3206 325 LQAREASLQAQLAQLEARL-AELPELEAE--------------LRRLEREVEVARELYESLLQRLEEARLAEAL 383
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
402-1147 |
2.07e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.81 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 402 KGEVQQSSKELQNMKLLLGQEEGLRHG----LEAQVKELQLKLKHSQSPDSGKESLLKdLLDTRELLEELLEGKQRVEEQ 477
Cdd:TIGR00618 193 HGKAELLTLRSQLLTLCTPCMPDTYHErkqvLEKELKHLREALQQTQQSHAYLTQKRE-AQEEQLKKQQLLKQLRARIEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 478 LRLRERELTALKGAL-----KEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQ------DHAALEAERQKMSSLVRELQ 546
Cdd:TIGR00618 272 LRAQEAVLEETQERInrarkAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKllmkraAHVKQQSSIEEQRRLLQTLH 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 547 RELEETSEETGHwQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDleqarasTRDTHQVEELKKELRRTQ 626
Cdd:TIGR00618 352 SQEIHIRDAHEV-ATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDIL-------QREQATIDTRTSAFRDLQ 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 627 GELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKvaseteamvlgqrr 706
Cdd:TIGR00618 424 GQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKK-------------- 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 707 ATVETTLRETQEENDEFRRRILGLEQQLKEArGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEegnlaaaKRAL 786
Cdd:TIGR00618 490 AVVLARLLELQEEPCPLCGSCIHPNPARQDI-DNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQ-------RASL 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 787 EVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMED 866
Cdd:TIGR00618 562 KEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQEL 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 867 YKEKARKEvadaqRQAKDWASEAEKNSGGLSRLQDElqrlrQALQTSQAERDTARLDKELLAQRLQGLEQEAEnkkrfqd 946
Cdd:TIGR00618 642 ALKLTALH-----ALQLTLTQERVREHALSIRVLPK-----ELLASRQLALQKMQSEKEQLTYWKEMLAQCQT------- 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 947 dkarQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQErsarQDLECDKISLERQNKDLKTRLASSE 1026
Cdd:TIGR00618 705 ----LLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQ----ARTVLKARTEAHFNNNEEVTAALQT 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1027 GfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAE 1106
Cdd:TIGR00618 777 G-AELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYE 855
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1614229825 1107 EEIERLDSLRKKaQRELEEQHEVNEQLQARIKSLEKDAWRK 1147
Cdd:TIGR00618 856 ECSKQLAQLTQE-QAKIIQLSDKLNGINQIKIQFDGDALIK 895
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
821-1143 |
2.11e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.86 E-value: 2.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 821 LRRSKAELEEQKRLLNRTVDRLNKELEQIGDDSKlALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQ 900
Cdd:TIGR04523 129 LEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYN-DLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLK 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 901 DELQRLRQalqtsqaerdtarLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTD 978
Cdd:TIGR04523 208 KKIQKNKS-------------LESQIseLKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 979 RVNRGRDQVDQLRTELMQERSARQDLECDKIslERQNKDLKTRLASSEgfQKPSASLSQLESQNQL---LQERLQAEERE 1055
Cdd:TIGR04523 275 ELEQNNKKIKELEKQLNQLKSEISDLNNQKE--QDWNKELKSELKNQE--KKLEEIQNQISQNNKIisqLNEQISQLKKE 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1056 KTVLQSTNRKLERRVKELSIQIDD---ERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRE---LEEQHE- 1128
Cdd:TIGR04523 351 LTNSESENSEKQRELEEKQNEIEKlkkENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEkelLEKEIEr 430
|
330
....*....|....*...
gi 1614229825 1129 ---VNEQLQARIKSLEKD 1143
Cdd:TIGR04523 431 lkeTIIKNNSEIKDLTNQ 448
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
851-977 |
2.62e-05 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 47.74 E-value: 2.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 851 DDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSG--GLSRLQDELQRLRQALQ---TSQAERDTARLDKE 925
Cdd:COG1566 79 TDLQAALAQAEAQLAAAEAQLARLEAELGAEAEIAAAEAQLAAAqaQLDLAQRELERYQALYKkgaVSQQELDEARAALD 158
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1614229825 926 LLAQRLQGLEQEAENKKRfQDDKARQLKSLEEKVSRLEAELDEEKNTVELLT 977
Cdd:COG1566 159 AAQAQLEAAQAQLAQAQA-GLREEEELAAAQAQVAQAEAALAQAELNLARTT 209
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
476-1118 |
2.78e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.68 E-value: 2.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 476 EQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEE 555
Cdd:pfam12128 251 NTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQ 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 556 TGhwqsMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQArASTRDTHQVEELKKELRRTQGELKELQAE 635
Cdd:pfam12128 331 HG----AFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAK-YNRRRSKIKEQNNRDIAGIKDKLAKIREA 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 636 QQNQEVTGRHQNQVLEKQL-----AALREEADRGRELEQQNLQLQKTLQQLRQDCEE-ASKAKVASETEAM--VLGQRRA 707
Cdd:pfam12128 406 RDRQLAVAEDDLQALESELreqleAGKLEFNEEEYRLKSRLGELKLRLNQATATPELlLQLENFDERIERAreEQEAANA 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 708 TVE------TTLRETQEENDEFRRRILGLEQQLKEArgLAEGGEAVEARLRDKVHRLEVEKQQLEEALN--AARE----- 774
Cdd:pfam12128 486 EVErlqselRQARKRRDQASEALRQASRRLEERQSA--LDELELQLFPQAGTLLHFLRKEAPDWEQSIGkvISPEllhrt 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 775 ------EEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELE- 847
Cdd:pfam12128 564 dldpevWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETf 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 848 --QIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSR-LQDELQRLRQALQTSQAERDTARLD- 923
Cdd:pfam12128 644 arTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKkHQAWLEEQKEQKREARTEKQAYWQVv 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 924 ----KELLAQRLQGLEQEAENKKRFQD----DKARQLKSL---EEKVSRLEAELDEEKNTVElltdRVNRGRDQVDQLRt 992
Cdd:pfam12128 724 egalDAQLALLKAAIAARRSGAKAELKaletWYKRDLASLgvdPDVIAKLKREIRTLERKIE----RIAVRRQEVLRYF- 798
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 993 ELMQER--SARQDLECDKISLERQNKDLKTRLASSEgfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER-R 1069
Cdd:pfam12128 799 DWYQETwlQRRPRLATQLSNIERAISELQQQLARLI--ADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATlK 876
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1614229825 1070 VKELSIQIDDERQHVNDQKDQLTLRVKALKRQVdeaEEEIERLDSLRKK 1118
Cdd:pfam12128 877 EDANSEQAQGSIGERLAQLEDLKLKRDYLSESV---KKYVEHFKNVIAD 922
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
785-1156 |
3.00e-05 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 47.75 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 785 ALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTV---DRLNKELEQIGDDSKLALQQLQ 861
Cdd:pfam19220 7 LLRVRLGEMADRLEDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERaayGKLRRELAGLTRRLSAAEGELE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 862 A-------------QMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQtsQAERDTARLDKEL-- 926
Cdd:pfam19220 87 ElvarlakleaalrEAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQ--AAEKALQRAEGELat 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 927 LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEkntvelltdrvnrgRDQVDQLRTELMQERSARQDLEC 1006
Cdd:pfam19220 165 ARERLALLEQENRRLQALSEEQAAELAELTRRLAELETQLDAT--------------RARLRALEGQLAAEQAERERAEA 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1007 dkiSLERQNKDLKTRLASSEgfQKPSASLSQLESQNQLLQE-RLQAEEREKTVlqstnRKLERRVKELSIQIDD-ERQHV 1084
Cdd:pfam19220 231 ---QLEEAVEAHRAERASLR--MKLEALTARAAATEQLLAEaRNQLRDRDEAI-----RAAERRLKEASIERDTlERRLA 300
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229825 1085 NDQKD--QLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDawRKASRSAAESA 1156
Cdd:pfam19220 301 GLEADleRRTQQFQEMQRARAELEERAEMLTKALAAKDAALERAEERIASLSDRIAELTKR--FEVERAALEQA 372
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
337-579 |
3.86e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 3.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 337 MVSPASTKALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVGLERQLEEKAEECHRLQELLERRKGEVQQSSKELQNmk 416
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE-- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 417 lLLGQEEGLRHGLEAQVKELQLKLKHSQSpdSGKESLLKDLLDTRELLEELLEGkQRVEEQLRLRERELTALKGALkeev 496
Cdd:COG4942 88 -LEKEIAELRAELEAQKEELAELLRALYR--LGRQPPLALLLSPEDFLDAVRRL-QYLKYLAPARREQAEELRADL---- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 497 ashdQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETghwqSMFQKNKEELRATKQE 576
Cdd:COG4942 160 ----AELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAEL----AELQQEAEELEALIAR 231
|
...
gi 1614229825 577 LLQ 579
Cdd:COG4942 232 LEA 234
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
757-979 |
4.79e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.70 E-value: 4.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 757 RLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDE--AQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRL 834
Cdd:COG3206 165 NLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 835 LNRTVDRLNKELEQIGDDSklALQQLQAQMEDykekARKEVADAQRQAKDwaseaekNSGGLSRLQDELQRLRQALQT-S 913
Cdd:COG3206 245 LRAQLGSGPDALPELLQSP--VIQQLRAQLAE----LEAELAELSARYTP-------NHPDVIALRAQIAALRAQLQQeA 311
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229825 914 QAERDTARLDKELLAQRLQGLEQEAENkkrfQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDR 979
Cdd:COG3206 312 QRILASLEAELEALQAREASLQAQLAQ----LEARLAELPELEAELRRLEREVEVARELYESLLQR 373
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
471-1136 |
6.95e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.25 E-value: 6.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 471 KQRVEEQLRLRERELTALKGALkeevASHDQ--EVEHVR-LQYQRDTEQLRR----------SMQDATQDHAALEAERQK 537
Cdd:COG3096 377 LAEAEARLEAAEEEVDSLKSQL----ADYQQalDVQQTRaIQYQQAVQALEKaralcglpdlTPENAEDYLAAFRAKEQQ 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 538 MSSLVRELQRELEETSE-ETGHWQSM---------------FQKNKE------ELRATKQELLQLRMEKEEMEEELGEKM 595
Cdd:COG3096 453 ATEEVLELEQKLSVADAaRRQFEKAYelvckiageversqaWQTAREllrryrSQQALAQRLQQLRAQLAELEQRLRQQQ 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 596 EV--LQRDLEQARASTRDT-HQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEADRGRELEQQNL 672
Cdd:COG3096 533 NAerLLEEFCQRIGQQLDAaEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALE 612
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 673 QLQKTLQQLRQDCEEASKAK---VASETEAMV----LGQRRATVETTLRETQEENDEFRRRILGLEQQLKeARGLAEGGE 745
Cdd:COG3096 613 RLREQSGEALADSQEVTAAMqqlLEREREATVerdeLAARKQALESQIERLSQPGGAEDPRLLALAERLG-GVLLSEIYD 691
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 746 AV--------EARLRDKVHRLEVEKQQLEEALNAAREE--------EGNLAAAKRALEVRLDEAQRGLARLGQEQ----- 804
Cdd:COG3096 692 DVtledapyfSALYGPARHAIVVPDLSAVKEQLAGLEDcpedlyliEGDPDSFDDSVFDAEELEDAVVVKLSDRQwrysr 771
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 805 ----QALNRALEEegKQREALRRSKAELEEQKRLLNRTVDRLNKeLEQigDDSKLALQQLQAQMEDYKEKARKEVADAQR 880
Cdd:COG3096 772 fpevPLFGRAARE--KRLEELRAERDELAEQYAKASFDVQKLQR-LHQ--AFSQFVGGHLAVAFAPDPEAELAALRQRRS 846
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 881 QAKDwaseaeknsgGLSRLQDELQRLRQALQTSQAERDTAR--------LDKELLAQRLQGLEQE---AENKKRFQDDKA 949
Cdd:COG3096 847 ELER----------ELAQHRAQEQQLRQQLDQLKEQLQLLNkllpqanlLADETLADRLEELREEldaAQEAQAFIQQHG 916
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 950 RQLKSLEEKVSRLE---AELDEEKNTVELLTDRVNRGRDQVDQLrTELMQERS--ARQDLECDKISLERQNKDLKTRLAS 1024
Cdd:COG3096 917 KALAQLEPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIFAL-SEVVQRRPhfSYEDAVGLLGENSDLNEKLRARLEQ 995
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1025 SEGFQKPS-----ASLSQLESQNQLLQErLQAEEREKtvlQSTNRKLERRVKELSIQIDDE--------RQHVNDQKDQL 1091
Cdd:COG3096 996 AEEARREAreqlrQAQAQYSQYNQVLAS-LKSSRDAK---QQTLQELEQELEELGVQADAEaeerarirRDELHEELSQN 1071
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 1614229825 1092 TLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQAR 1136
Cdd:COG3096 1072 RSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAKAG 1116
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
492-1172 |
7.86e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.96 E-value: 7.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 492 LKEEVASHDQEVE--HVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEE 569
Cdd:TIGR00606 191 LRQVRQTQGQKVQehQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 570 LRA---TKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTrdthqVEELKKELRRTQGELKELQAEQQ--NQEVTGR 644
Cdd:TIGR00606 271 IKAlksRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRT-----VREKERELVDCQRELEKLNKERRllNQEKTEL 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 645 HQNQVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVA-------SETEAMVLGQRRATVETTLRETQ 717
Cdd:TIGR00606 346 LVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFhtlvierQEDEAKTAAQLCADLQSKERLKQ 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 718 EENDEFRRRILG-----------LEQQLKEARGLAEGGEAVEARLRDKvhrLEVEKQQLEEALNAAREEEGNLAAAKRAL 786
Cdd:TIGR00606 426 EQADEIRDEKKGlgrtielkkeiLEKKQEELKFVIKELQQLEGSSDRI---LELDQELRKAERELSKAEKNSLTETLKKE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 787 EVRLDEAQ----RGLARLGQEQQALNRALEEEgKQREALRRSKAELEEQKRLLN-RTVDRLNKEL-----EQIGDDSKLA 856
Cdd:TIGR00606 503 VKSLQNEKadldRKLRKLDQEMEQLNHHTTTR-TQMEMLTKDKMDKDEQIRKIKsRHSDELTSLLgyfpnKKQLEDWLHS 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 857 LQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQD-------------ELQRLRQALQTSQAERDTARLD 923
Cdd:TIGR00606 582 KSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDklfdvcgsqdeesDLERLKEEIEKSSKQRAMLAGA 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 924 KELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQD 1003
Cdd:TIGR00606 662 TAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1004 LECDKISLERQNKDLKTRLASSEgfqkpsaslSQLESQNQLLqERLQAEEREKTVLQSTNRKLERRVKELS-IQIDDERQ 1082
Cdd:TIGR00606 742 KEKEIPELRNKLQKVNRDIQRLK---------NDIEEQETLL-GTIMPEEESAKVCLTDVTIMERFQMELKdVERKIAQQ 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1083 HVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAESALKQEGL 1162
Cdd:TIGR00606 812 AAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLV 891
|
730
....*....|
gi 1614229825 1163 SSDEEFDNVY 1172
Cdd:TIGR00606 892 ELSTEVQSLI 901
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
706-1017 |
7.93e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 46.87 E-value: 7.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 706 RATVETTLRETQEENDEFRRRILG----LEQQLKEARG-LAEGGEAVEARLRDKVHRLEVEKQQLE-EALNAAREEEGNL 779
Cdd:COG5185 248 LAQTSDKLEKLVEQNTDLRLEKLGenaeSSKRLNENANnLIKQFENTKEKIAEYTKSIDIKKATESlEEQLAAAEAEQEL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 780 AAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRsKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQ 859
Cdd:COG5185 328 EESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVE-LSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 860 LQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERdtarldkelLAQRLQGLEQEAE 939
Cdd:COG5185 407 ILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSR---------LEEAYDEINRSVR 477
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229825 940 NKKRfqddkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKD 1017
Cdd:COG5185 478 SKKE----------DLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILALENLI 545
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
743-1142 |
8.39e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.04 E-value: 8.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 743 GGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEegkQREALR 822
Cdd:pfam15921 72 GKEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQED---LRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 823 RSKAELEEQKRLLNRTVDRLNKELEQIGD---DSKLALQQLQAQMEDYKEKARKEVADAQRQAK-DWASEAEKNSGGLSR 898
Cdd:pfam15921 149 NTVHELEAAKCLKEDMLEDSNTQIEQLRKmmlSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTmHFRSLGSAISKILRE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 899 LQDELQRLRQALQTSQAERDTARLDK----ELLAQ----RLQGLEQEAENKKRFQDDKARQLKSLEEKV-SRLEAELDEE 969
Cdd:pfam15921 229 LDTEISYLKGRIFPVEDQLEALKSESqnkiELLLQqhqdRIEQLISEHEVEITGLTEKASSARSQANSIqSQLEIIQEQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 970 KNTVELLTDRVNRGRDQVDQLRTELmqeRSARQDLECDKISLERQ----NKDLKTRLASSEGFQKPSASLsqlESQNQLL 1045
Cdd:pfam15921 309 RNQNSMYMRQLSDLESTVSQLRSEL---REAKRMYEDKIEELEKQlvlaNSELTEARTERDQFSQESGNL---DDQLQKL 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1046 QERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEE 1125
Cdd:pfam15921 383 LADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEK 462
|
410
....*....|....*..
gi 1614229825 1126 QHEVNEQLQARIKSLEK 1142
Cdd:pfam15921 463 VSSLTAQLESTKEMLRK 479
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
807-1120 |
1.01e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 807 LNRALEEEGKQREALRRSKAELEEQKRLLNR-TVDRLNK----ELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQ 881
Cdd:COG3206 96 LERVVDKLNLDEDPLGEEASREAAIERLRKNlTVEPVKGsnviEISYTSPDPELAAAVANALAEAYLEQNLELRREEARK 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 882 AKDWaseaeknsgglsrLQDELQRLRQALQTSQAERDTARLDKELLAqrlqgLEQEAenkkrfqDDKARQLKSLEEKVSR 961
Cdd:COG3206 176 ALEF-------------LEEQLPELRKELEEAEAALEEFRQKNGLVD-----LSEEA-------KLLLQQLSELESQLAE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 962 LEAELDEEKNTVELLTDRVNRGRDQVDQLrtelmQERSARQDLECDKISLERQNKDLKTRlassegFQKPSASLSQLESQ 1041
Cdd:COG3206 231 ARAELAEAEARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELAELSAR------YTPNHPDVIALRAQ 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1042 NQLLQERLQAEEREKTV-LQSTNRKLERRVKELSIQIDDERQHVNDQKdQLTLRVKALKRQVDEAEEEIERLDSLRKKAQ 1120
Cdd:COG3206 300 IAALRAQLQQEAQRILAsLEAELEALQAREASLQAQLAQLEARLAELP-ELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
872-1160 |
1.21e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 872 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERdtARLDKE---LLAQRLQGLEQEAENKKRFQDDK 948
Cdd:pfam17380 281 QKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQ--AEMDRQaaiYAEQERMAMERERELERIRQEER 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 949 ARQLKSLEEKVSRLEAELDEEKNTVELLTDRVN-RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKT------- 1020
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMRELERLQMERQQKNeRVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEarqrevr 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1021 RLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKE------LSIQIDDERQHVNDQKDQLTLR 1094
Cdd:pfam17380 439 RLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEeqrrkiLEKELEERKQAMIEEERKRKLL 518
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1614229825 1095 VKALK-RQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQL------QARIKSLEKDawRKASRSAAESALKQE 1160
Cdd:pfam17380 519 EKEMEeRQKAIYEEERRREAEEERRKQQEMEERRRIQEQMrkateeRSRLEAMERE--REMMRQIVESEKARA 589
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
723-891 |
1.22e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 46.31 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 723 FRRRILglEQQLKEARGLAEGgEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaakRALEVRLDEAQRGLARLGQ 802
Cdd:PRK12704 24 VRKKIA--EAKIKEAEEEAKR-ILEEAKKEAEAIKKEALLEAKEEIHKLRNEFE-------KELRERRNELQKLEKRLLQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 803 EQQALNRALE-------EEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIGddsklALQQLQAQ---MEDYKEKAR 872
Cdd:PRK12704 94 KEENLDRKLEllekreeELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIS-----GLTAEEAKeilLEKVEEEAR 168
|
170 180
....*....|....*....|
gi 1614229825 873 KEVADAQRQAKDWA-SEAEK 891
Cdd:PRK12704 169 HEAAVLIKEIEEEAkEEADK 188
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
755-1155 |
1.37e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 46.16 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 755 VHRLEVEKQQLEEALNAAREEEGNLA-AAKRALEVRLDEAQRGLARLGQEQQ-ALNRALEEegKQREALRRSKAELEEQK 832
Cdd:NF033838 35 VHAEEVRGGNNPTVTSSGNESQKEHAkEVESHLEKILSEIQKSLDKRKHTQNvALNKKLSD--IKTEYLYELNVLKEKSE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 833 -RLLNRTVDRLNKELEQIGDDSklalqqlqAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQ 911
Cdd:NF033838 113 aELTSKTKKELDAAFEQFKKDT--------LEPGKKVAEATKKVEEAEKKAKDQKEEDRRNYPTNTYKTLELEIAESDVE 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 912 TSQAERDTARLDkellAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLR 991
Cdd:NF033838 185 VKKAELELVKEE----AKEPRDEEKIKQAKAKVESKKAEATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDK 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 992 TELMQERSARQDLEcdkiSLERQNKDLKTRLASSEGFQKPSASLSQlesqnqllqerlqaeerEKTVLQSTNRKLERRVK 1071
Cdd:NF033838 261 PKRRAKRGVLGEPA----TPDKKENDAKSSDSSVGEETLPSPSLKP-----------------EKKVAEAEKKVEEAKKK 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1072 ELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI-------ERLDSLRKKAQRELEEQHEVNEQLQaRIKSLEKDA 1144
Cdd:NF033838 320 AKDQKEEDRRNYPTNTYKTLELEIAESDVKVKEAELELvkeeakePRNEEKIKQAKAKVESKKAEATRLE-KIKTDRKKA 398
|
410
....*....|.
gi 1614229825 1145 WRKASRSAAES 1155
Cdd:NF033838 399 EEEAKRKAAEE 409
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
850-1141 |
1.38e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.66 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 850 GDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQ 929
Cdd:COG4372 1 GDRLGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 930 RLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKI 1009
Cdd:COG4372 81 ELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1010 SLERQNKDLKTRLASSEGFQKPSASLSQL-ESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQK 1088
Cdd:COG4372 161 SLQEELAALEQELQALSEAEAEQALDELLkEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLD 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1614229825 1089 DQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLE 1141
Cdd:COG4372 241 ALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAAL 293
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
817-1042 |
1.38e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 817 QREALRRSKAELEEQKRLLNRTVDRLNKELEQIG---DDSKLALQQLQAQMEDYKE---KARKEVADAQRQAKDWASEAE 890
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNeeyNELQAELEALQAEIDKLQAeiaEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 891 KNSGGLSRLQDEL--QRLRQALQTSQAERDTARLDKELLAQrLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDE 968
Cdd:COG3883 97 RSGGSVSYLDVLLgsESFSDFLDRLSALSKIADADADLLEE-LKADKAELEAKKAELEAKLAELEALKAELEAAKAELEA 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1614229825 969 EKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQN 1042
Cdd:COG3883 176 QQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGA 249
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
381-1151 |
1.48e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.19 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 381 ERQLEEKAEECHRLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLK-DLLD 459
Cdd:TIGR00606 401 ERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILElDQEL 480
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 460 TRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMS 539
Cdd:TIGR00606 481 RKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSD 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 540 SLVREL-----QRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDTHQ 614
Cdd:TIGR00606 561 ELTSLLgyfpnKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESD 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 615 VEELKKELRRTQGELKELQA-----EQQNQEVTGRHQN--QVLEKQLAALREEADRGRELEQQNLQLQKTLQQLRQDCEE 687
Cdd:TIGR00606 641 LERLKEEIEKSSKQRAMLAGatavySQFITQLTDENQSccPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKK 720
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 688 ASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEE 767
Cdd:TIGR00606 721 KEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQME 800
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 768 AlnaareEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELE 847
Cdd:TIGR00606 801 L------KDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKL 874
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 848 QIGDdsklALQQLQaQMEDYKEKARKEVADAQRQAKDwasEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELL 927
Cdd:TIGR00606 875 QIGT----NLQRRQ-QFEEQLVELSTEVQSLIREIKD---AKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDI 946
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 928 AQRLQGLEQEAEN-KKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDqlrTELMQERSARQDLEC 1006
Cdd:TIGR00606 947 KEKVKNIHGYMKDiENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDID---TQKIQERWLQDNLTL 1023
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1007 DKIslERQNKDLKTRLASSEGfQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVND 1086
Cdd:TIGR00606 1024 RKR--ENELKEVEEELKQHLK-EMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAE 1100
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1614229825 1087 QKDQLTLRVKALkrqvdeAEEEIERLDSLRKKAQRELEEQHEVNeqlQARIKSLEKDAWRKASRS 1151
Cdd:TIGR00606 1101 EKYREMMIVMRT------TELVNKDLDIYYKTLDQAIMKFHSMK---MEEINKIIRDLWRSTYRG 1156
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
509-1141 |
1.87e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.88 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 509 QYQRDTEQLRRSMQDATQDHaaLEAERQKMSSLVRELQRELEETSEetghwqsMFQKNKEELRatkQELLQLRMEKEEME 588
Cdd:pfam15921 56 KYEVELDSPRKIIAYPGKEH--IERVLEEYSHQVKDLQRRLNESNE-------LHEKQKFYLR---QSVIDLQTKLQEMQ 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 589 eelgekmevLQRDlEQARASTRDTHQVEELKKELRRTQGELKELQAEQqnqevtgrhqnqvlEKQLAALREEADRGRELE 668
Cdd:pfam15921 124 ---------MERD-AMADIRRRESQSQEDLRNQLQNTVHELEAAKCLK--------------EDMLEDSNTQIEQLRKMM 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 669 QQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRR--ATVETTLRETQEENDEFRRRILGLEQQLkearglaeggEA 746
Cdd:pfam15921 180 LSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSlgSAISKILRELDTEISYLKGRIFPVEDQL----------EA 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 747 VEARLRDKVHRLEVEKQQLEEALNAAREeegnlaaakralevrldeaqrglarlgQEQQALNRALEEEGKQREALRRSKA 826
Cdd:pfam15921 250 LKSESQNKIELLLQQHQDRIEQLISEHE---------------------------VEITGLTEKASSARSQANSIQSQLE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 827 ELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRL 906
Cdd:pfam15921 303 IIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 907 RQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAE----LDEEKNTVELLTDRVNR 982
Cdd:pfam15921 383 LADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcqgqMERQMAAIQGKNESLEK 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 983 GRDQVDQLRTELMQERSARQDLECDKISL---ERQNKDLKTRLASSE-GFQKPSASLSQLESQNQLLQERLQAEEREKTV 1058
Cdd:pfam15921 463 VSSLTAQLESTKEMLRKVVEELTAKKMTLessERTVSDLTASLQEKErAIEATNAEITKLRSRVDLKLQELQHLKNEGDH 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1059 LQSTNRKLERRVKELSiQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIK 1138
Cdd:pfam15921 543 LRNVQTECEALKLQMA-EKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIR 621
|
...
gi 1614229825 1139 SLE 1141
Cdd:pfam15921 622 ELE 624
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
713-1135 |
1.90e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.73 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 713 LRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDE 792
Cdd:TIGR00618 158 LKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQ 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 793 AQRGLARLGQEQQALnralEEEGKQREALRRSKAELEEQKRLLNRtVDRLNKELEQIGDDSKLALQqlQAQMEDYKEKAR 872
Cdd:TIGR00618 238 TQQSHAYLTQKREAQ----EEQLKKQQLLKQLRARIEELRAQEAV-LEETQERINRARKAAPLAAH--IKAVTQIEQQAQ 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 873 KEVADAQRQAKDWASEAEKNSGGLSRlQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQdDKARQL 952
Cdd:TIGR00618 311 RIHTELQSKMRSRAKLLMKRAAHVKQ-QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIH-TLQQQK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 953 KSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPS 1032
Cdd:TIGR00618 389 TTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSL 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1033 ASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVnDQKDQLTLRVKALKRQVDEAEEEIER- 1111
Cdd:TIGR00618 469 KEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDI-DNPGPLTRRMQRGEQTYAQLETSEEDv 547
|
410 420
....*....|....*....|....*..
gi 1614229825 1112 ---LDSLRKKAQRELEEQHEVNEQLQA 1135
Cdd:TIGR00618 548 yhqLTSERKQRASLKEQMQEIQQSFSI 574
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
533-1103 |
2.12e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.60 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 533 AERQKMSSLVRELQ--RELEETSEETGHWQSMFqKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTR 610
Cdd:pfam12128 218 LNRQQVEHWIRDIQaiAGIMKIRPEFTKLQQEF-NTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 611 DthQVEELKKELRrtqGELKELQAEQQNQevtgRHQNQVLEKQLAALREEADRGRELEQQNLQLQKTlqqlrqDCEEASK 690
Cdd:pfam12128 297 D--QWKEKRDELN---GELSAADAAVAKD----RSELEALEDQHGAFLDADIETAAADQEQLPSWQS------ELENLEE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 691 akvasETEAMVLGQRRATVETTLREtQEENDEFRRRILGLEQQLKEARGLAEGGEAVEarlRDKVHRLEVE-KQQLEEAL 769
Cdd:pfam12128 362 -----RLKALTGKHQDVTAKYNRRR-SKIKEQNNRDIAGIKDKLAKIREARDRQLAVA---EDDLQALESElREQLEAGK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 770 NAAREEEGNLAAAKRALEVRLDEAQ---RGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKEl 846
Cdd:pfam12128 433 LEFNEEEYRLKSRLGELKLRLNQATatpELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQA- 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 847 EQIGDDSKLALQQLQAQMEdykEKARKEVADAQRQAKDWaseaeknSGGLSRLQDELQRLRQALQTSQAERDTARlDKEL 926
Cdd:pfam12128 512 SRRLEERQSALDELELQLF---PQAGTLLHFLRKEAPDW-------EQSIGKVISPELLHRTDLDPEVWDGSVGG-ELNL 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 927 LAQRLQgLEQEAENKKRFQDDkarqlkSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLEC 1006
Cdd:pfam12128 581 YGVKLD-LKRIDVPEWAASEE------ELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARL 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1007 DKISL--ERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQA--EEREKTVLQSTNRKLERR---VKELSIQIDD 1079
Cdd:pfam12128 654 DLRRLfdEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAwlEEQKEQKREARTEKQAYWqvvEGALDAQLAL 733
|
570 580
....*....|....*....|....
gi 1614229825 1080 ERQHVNDQKDQLTLRVKALKRQVD 1103
Cdd:pfam12128 734 LKAAIAARRSGAKAELKALETWYK 757
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
899-1022 |
2.27e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.96 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 899 LQDELQRLRQALQTSQAERDtarldkellaqRLQGLEQEAenkkrfqddkARQLKSLEEKVSRLEAELDEEKNTVELLTD 978
Cdd:PRK09039 79 LQDSVANLRASLSAAEAERS-----------RLQALLAEL----------AGAGAAAEGRAGELAQELDSEKQVSARALA 137
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1614229825 979 RVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRL 1022
Cdd:PRK09039 138 QVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRL 181
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
962-1124 |
2.35e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 44.75 E-value: 2.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 962 LEAELDEEKNTVELLTDRVNRGRDQVDQLRTElMQERSARQDLECDkiSLERQNKDLKTRLASSegFQKPSASLSQLESQ 1041
Cdd:pfam09787 45 LTLELEELRQERDLLREEIQKLRGQIQQLRTE-LQELEAQQQEEAE--SSREQLQELEEQLATE--RSARREAEAELERL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1042 NQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDeRQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQR 1121
Cdd:pfam09787 120 QEELRYLEEELRRSKATLQSRIKDREAEIEKLRNQLTS-KSQSSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSLVL 198
|
...
gi 1614229825 1122 ELE 1124
Cdd:pfam09787 199 QLE 201
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
799-969 |
2.62e-04 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 45.20 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 799 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLL---NRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKARKEV 875
Cdd:PRK00409 496 RLGLPENIIEEAKKLIGEDKEKLNELIASLEELERELeqkAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEA 575
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 876 ADAQRQAKdwaSEAEKnsgglsrLQDELQRLRQALQTSQAERDTARLDKElLAQRLQGLEQEAENKKRFQD-----DKAR 950
Cdd:PRK00409 576 QQAIKEAK---KEADE-------IIKELRQLQKGGYASVKAHELIEARKR-LNKANEKKEKKKKKQKEKQEelkvgDEVK 644
|
170
....*....|....*....
gi 1614229825 951 qLKSLEEKVSRLEAELDEE 969
Cdd:PRK00409 645 -YLSLGQKGEVLSIPDDKE 662
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
763-1112 |
2.90e-04 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 44.83 E-value: 2.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 763 QQLEEALNAAREEegNLAAAKRALevrlDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVD-- 840
Cdd:PRK04778 86 EQLFEAEELNDKF--RFRKAKHEI----NEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLan 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 841 -----RLNKELEQigddsklALQQLQAQMEDYKE--------KARKEVADAQRQAKDWASEAEKNSGGLSRLQ----DEL 903
Cdd:PRK04778 160 rfsfgPALDELEK-------QLENLEEEFSQFVEltesgdyvEAREILDQLEEELAALEQIMEEIPELLKELQtelpDQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 904 QRLRQALQtsQAERDTARLDKELLAQRLQGLEQEAENKKrfQDDKARQLKSLEEKVSRLEAELD----------EEKNTV 973
Cdd:PRK04778 233 QELKAGYR--ELVEEGYHLDHLDIEKEIQDLKEQIDENL--ALLEELDLDEAEEKNEEIQERIDqlydilerevKARKYV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 974 EL----LTDRVNRGRDQVDQLRTELMQ----------ERSARQDLECDKISLERQNKDLKTRLASSEG--------FQKP 1031
Cdd:PRK04778 309 EKnsdtLPDFLEHAKEQNKELKEEIDRvkqsytlnesELESVRQLEKQLESLEKQYDEITERIAEQEIayselqeeLEEI 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1032 SASLSQLESQNQLLQERLQA---EERE--------KTVLQSTNRKLERR--------VKELSIQIDDERQHVNDQKDQLT 1092
Cdd:PRK04778 389 LKQLEEIEKEQEKLSEMLQGlrkDELEarekleryRNKLHEIKRYLEKSnlpglpedYLEMFFEVSDEIEALAEELEEKP 468
|
410 420
....*....|....*....|
gi 1614229825 1093 LRVKALKRQVDEAEEEIERL 1112
Cdd:PRK04778 469 INMEAVNRLLEEATEDVETL 488
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
762-1054 |
2.98e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.04 E-value: 2.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 762 KQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNraleEEGKQREALRRSKAELEEQKRLL--NRTV 839
Cdd:PRK10929 29 TQELEQAKAAKTPAQAEIVEALQSALNWLEERKGSLERAKQYQQVID----NFPKLSAELRQQLNNERDEPRSVppNMST 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 840 DRLNKELEQIGddSKLALQQLQAQMEdyKEKARkEVADAQRQAKDWASEAeknsgglSRLQDELQRLRQALQTSQAErdt 919
Cdd:PRK10929 105 DALEQEILQVS--SQLLEKSRQAQQE--QDRAR-EISDSLSQLPQQQTEA-------RRQLNEIERRLQTLGTPNTP--- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 920 arldkellaqrlqgLEQEaenkkrfqddkarQLKSLEEKVSRLEAELDEekntVELLTDRVNRgRDQVDQLRTELMQERS 999
Cdd:PRK10929 170 --------------LAQA-------------QLTALQAESAALKALVDE----LELAQLSANN-RQELARLRSELAKKRS 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1614229825 1000 ARQDLECDKI-----SLERQNKDL---KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEER 1054
Cdd:PRK10929 218 QQLDAYLQALrnqlnSQRQREAERaleSTELLAEQSGDLPKSIVAQFKINRELSQALNQQAQR 280
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
958-1126 |
3.23e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.76 E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 958 KVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQ 1037
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1038 LESqnqlLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1117
Cdd:COG1579 91 YEA----LQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAERE 166
|
....*....
gi 1614229825 1118 KAQRELEEQ 1126
Cdd:COG1579 167 ELAAKIPPE 175
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
603-1143 |
4.44e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.57 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 603 EQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRhqNQVLEKQLAALREEADRGRELEQQNLQLQKtlqqlr 682
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHER--KQVLEKELKHLREALQQTQQSHAYLTQKRE------ 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 683 qDCEEASKAKVAseteamvLGQRRATVEtTLRETQEENDEFRRRIlglEQQLKEARgLAEGGEAVEaRLRDKVHRLEVEK 762
Cdd:TIGR00618 251 -AQEEQLKKQQL-------LKQLRARIE-ELRAQEAVLEETQERI---NRARKAAP-LAAHIKAVT-QIEQQAQRIHTEL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 763 QQLEEALNAAREEEGNLAAAKRALEvrldEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLlnRTVDRL 842
Cdd:TIGR00618 317 QSKMRSRAKLLMKRAAHVKQQSSIE----EQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTL--QQQKTT 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 843 NKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARL 922
Cdd:TIGR00618 391 LTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 923 DKELLAQRLQGLEQEAENKK---RFQDDKARQLKSLEEKVSRLEAELDEEKNTvELLTDRVNRGRDQVDQLRTELMQERS 999
Cdd:TIGR00618 471 REQQLQTKEQIHLQETRKKAvvlARLLELQEEPCPLCGSCIHPNPARQDIDNP-GPLTRRMQRGEQTYAQLETSEEDVYH 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1000 ARQDLECDKISLERQNKDLK-TRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRvKELSIQID 1078
Cdd:TIGR00618 550 QLTSERKQRASLKEQMQEIQqSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRK-LQPEQDLQ 628
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1614229825 1079 DERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNE--QLQARIKSLEKD 1143
Cdd:TIGR00618 629 DVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLAlqKMQSEKEQLTYW 695
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
686-1023 |
6.09e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.74 E-value: 6.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 686 EEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQL 765
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 766 EEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKE 845
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 846 LEQIGddsklalQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKE 925
Cdd:COG4372 166 LAALE-------QELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSAL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 926 LLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLE 1005
Cdd:COG4372 239 LDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALL 318
|
330
....*....|....*...
gi 1614229825 1006 CDKISLERQNKDLKTRLA 1023
Cdd:COG4372 319 AALLELAKKLELALAILL 336
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
615-1074 |
6.78e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.18 E-value: 6.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 615 VEELKKELRRTQGELKELQAEQQN-QEVTGRHQNQVlekqlAA--LREEADRGRELEQQNlqlqktlqqlrqdceEASKA 691
Cdd:PRK04863 235 MEAALRENRMTLEAIRVTQSDRDLfKHLITESTNYV-----AAdyMRHANERRVHLEEAL---------------ELRRE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 692 KVASETEamvlgqrRATVETTLRETQEENDEFRRRILGLEQQLK----------EARGLAEGGEAVEARLRDKVHRLEVE 761
Cdd:PRK04863 295 LYTSRRQ-------LAAEQYRLVEMARELAELNEAESDLEQDYQaasdhlnlvqTALRQQEKIERYQADLEELEERLEEQ 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 762 KQQLEEalnaAREEEGNLAAAKRALEVRLDEAQRGLA-----------RLGQEQQALnRALEEEGK--QREALRRSKAE- 827
Cdd:PRK04863 368 NEVVEE----ADEQQEENEARAEAAEEEVDELKSQLAdyqqaldvqqtRAIQYQQAV-QALERAKQlcGLPDLTADNAEd 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 828 -LEEQKRLLNRTVDRLNkELEQIGDDSKLALQQLQAQMedykEKARKEVADAQR-QAKDWASEAEKNSGGLSRLQDELQR 905
Cdd:PRK04863 443 wLEEFQAKEQEATEELL-SLEQKLSVAQAAHSQFEQAY----QLVRKIAGEVSRsEAWDVARELLRRLREQRHLAEQLQQ 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 906 LRQAL----QTSQAERDTARLDKELLAQRLQGLEQEAEnkkrfqddkarqlksLEEKVSRLEAELDEEKNTVELLTDRVN 981
Cdd:PRK04863 518 LRMRLseleQRLRQQQRAERLLAEFCKRLGKNLDDEDE---------------LEQLQEELEARLESLSESVSEARERRM 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 982 RGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEgfqkpsaslsQLESQNQLLQERLQAEEREKTVLQS 1061
Cdd:PRK04863 583 ALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQ----------DVTEYMQQLLERERELTVERDELAA 652
|
490
....*....|...
gi 1614229825 1062 TNRKLERRVKELS 1074
Cdd:PRK04863 653 RKQALDEEIERLS 665
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1038-1152 |
7.00e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 7.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1038 LESQNQLLQERLQAEeREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRK 1117
Cdd:PRK12704 60 LEAKEEIHKLRNEFE-KELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIE 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1614229825 1118 KAQRELEE-----------------QHEVNEQLQARIKSLEKDAWRKASRSA 1152
Cdd:PRK12704 139 EQLQELERisgltaeeakeillekvEEEARHEAAVLIKEIEEEAKEEADKKA 190
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
721-1114 |
7.07e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 43.69 E-value: 7.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 721 DEFRRRILGLEQQLKEARGLAEGGEAVEARlrDKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEVRLDEAQRGLARL 800
Cdd:pfam06160 149 DELEKQLAEIEEEFSQFEELTESGDYLEAR--EVLEKLEEETDALEELMEDIPPL---YEELKTELPDQLEELKEGYREM 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 801 GQEQQAL-NRALEEEGKQ-REALRRSKAELEEQKrllnrtVDRLNKELEQIGDDsklaLQQLQAQMEdyKE-KARKEVAD 877
Cdd:pfam06160 224 EEEGYALeHLNVDKEIQQlEEQLEENLALLENLE------LDEAEEALEEIEER----IDQLYDLLE--KEvDAKKYVEK 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 878 AQRQAKDWASEAEKNSgglSRLQDELQRLRQALQTSQAErdtarldkellAQRLQGLEqeaenkkrfqddkaRQLKSLEE 957
Cdd:pfam06160 292 NLPEIEDYLEHAEEQN---KELKEELERVQQSYTLNENE-----------LERVRGLE--------------KQLEELEK 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 958 KVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLrtelmqersarqdlecdkislERQNKDLKTRLASsegfqkpsaslsq 1037
Cdd:pfam06160 344 RYDEIVERLEEKEVAYSELQEELEEILEQLEEI---------------------EEEQEEFKESLQS------------- 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1038 LESQNQLLQERLQaeeREKTVLQSTNRKLERR--------VKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI 1109
Cdd:pfam06160 390 LRKDELEAREKLD---EFKLELREIKRLVEKSnlpglpesYLDYFFDVSDEIEDLADELNEVPLNMDEVNRLLDEAQDDV 466
|
....*
gi 1614229825 1110 ERLDS 1114
Cdd:pfam06160 467 DTLYE 471
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
598-822 |
7.96e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 7.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 598 LQRDLEQARASTRDT-----HQVEELKKELRRTQGELKELQaeQQNQEVTGRHQNQVLEKQLAALREEADRGReLEQQNL 672
Cdd:COG3206 162 LEQNLELRREEARKAlefleEQLPELRKELEEAEAALEEFR--QKNGLVDLSEEAKLLLQQLSELESQLAEAR-AELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 673 QLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQEENDEFRRRILGLEQQLKEARglaeggEAVEARLR 752
Cdd:COG3206 239 EARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALR------AQLQQEAQ 312
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 753 DKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEvRLDEAQRGLARLGQEQQALNRALEEEGKQREALR 822
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQ---LAQLEARLA-ELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
709-920 |
1.20e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 709 VETTLRETQEENDEFRRRILGLEQQLKEARGLAEggeaveaRLRDKVHRLEVEKQQLEEALNAAREEegnLAAAKRALEV 788
Cdd:COG3883 21 KQKELSELQAELEAAQAELDALQAELEELNEEYN-------ELQAELEALQAEIDKLQAEIAEAEAE---IEERREELGE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 789 RLDEAQRGLARLG---------------QEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQIgDDS 853
Cdd:COG3883 91 RARALYRSGGSVSyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAEL-EAA 169
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1614229825 854 KLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTA 920
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA 236
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
919-1156 |
1.37e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 919 TARLDKELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELmqER 998
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL--GE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 999 SARQdlecdkISLERQNKDLKTRLASSEGFQ---KPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSI 1075
Cdd:COG3883 91 RARA------LYRSGGSVSYLDVLLGSESFSdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1076 QIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKDAWRKASRSAAES 1155
Cdd:COG3883 165 ELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 244
|
.
gi 1614229825 1156 A 1156
Cdd:COG3883 245 S 245
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
562-939 |
1.50e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.57 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 562 MFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQARASTRDthQVEELKKELRRTQGELKELQAEQQNQEV 641
Cdd:pfam07888 31 LLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELES--RVAELKEELRQSREKHEELEEKYKELSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 642 TGRHQNQVLEKQLAALREEADRGRELEQqnlqlqktlqqlrqDCEEASKAKVASETEAMVLGQRRATVETTLRETQEEND 721
Cdd:pfam07888 109 SSEELSEEKDALLAQRAAHEARIRELEE--------------DIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERK 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 722 EFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAK---RALEVRLDEAQRGLA 798
Cdd:pfam07888 175 QLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLeelRSLQERLNASERKVE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 799 RLGQEQQAL----NRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKE---LEQIGDDSKLALQQLQAQMEDYKEKA 871
Cdd:pfam07888 255 GLGEELSSMaaqrDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQEretLQQSAEADKDRIEKLSAELQRLEERL 334
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1614229825 872 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAE 939
Cdd:pfam07888 335 QEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLE 402
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
1013-1152 |
1.61e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 42.39 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1013 RQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRkLERRVKELSIQIDDERQHVNDQKDQLT 1092
Cdd:PRK12705 30 RLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQR-EEERLVQKEEQLDARAEKLDNLENQLE 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1093 LRVKALKRQVDEAEEEIERLD-------SLRKKAQREL---EEQHEVNEQLQARIKSLEKDAWRKASRSA 1152
Cdd:PRK12705 109 EREKALSARELELEELEKQLDnelyrvaGLTPEQARKLllkLLDAELEEEKAQRVKKIEEEADLEAERKA 178
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
973-1148 |
1.62e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 973 VELLTDRVNRGRDQVDQLRTELMQERSARQDLEcdkiSLERQNKDLKTRLASSEGFQK---PSASLSQLESQNQLLQERL 1049
Cdd:COG4717 73 LKELEEELKEAEEKEEEYAELQEELEELEEELE----ELEAELEELREELEKLEKLLQllpLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1050 QAEEREKTVLQStnrkLERRVKELSIQIDDERQHVNDQKDQLTLrvkALKRQVDEAEEEIERLDSLRKKAQRELEEQHEV 1129
Cdd:COG4717 149 EELEERLEELRE----LEEELEELEAELAELQEELEELLEQLSL---ATEEELQDLAEELEELQQRLAELEEELEEAQEE 221
|
170
....*....|....*....
gi 1614229825 1130 NEQLQARIKSLEKDAWRKA 1148
Cdd:COG4717 222 LEELEEELEQLENELEAAA 240
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
812-1131 |
1.69e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.58 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 812 EEEGKQREALRRSKAELEEQKRLLNrTVDRLNKELEQIGDDSKLAL---QQLQAQMEDYKEKARKEVADAQRQAKDWASE 888
Cdd:PRK01156 325 HAIIKKLSVLQKDYNDYIKKKSRYD-DLNNQILELEGYEMDYNSYLksiESLKKKIEEYSKNIERMSAFISEILKIQEID 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 889 AEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEA-----------ENKKRFQDDKARQLKSLEE 957
Cdd:PRK01156 404 PDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSvcpvcgttlgeEKSNHIINHYNEKKSRLEE 483
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 958 KVSRLEAE---LDEEKNTVELLTDRVNRGrdQVDQLRTELMQERSARQDLECDKISLER-QNKDLKTRLASSegfQKPSA 1033
Cdd:PRK01156 484 KIREIEIEvkdIDEKIVDLKKRKEYLESE--EINKSINEYNKIESARADLEDIKIKINElKDKHDKYEEIKN---RYKSL 558
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1034 SLSQLESQN----QLLQER----LQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEA 1105
Cdd:PRK01156 559 KLEDLDSKRtswlNALAVIslidIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEI 638
|
330 340
....*....|....*....|....*.
gi 1614229825 1106 EEEIERLDSLRKKAQRELEEQHEVNE 1131
Cdd:PRK01156 639 QENKILIEKLRGKIDNYKKQIAEIDS 664
|
|
| DUF4175 |
pfam13779 |
Domain of unknown function (DUF4175); |
713-916 |
1.85e-03 |
|
Domain of unknown function (DUF4175);
Pssm-ID: 463981 [Multi-domain] Cd Length: 833 Bit Score: 42.67 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 713 LRETQEENDEFRRR------ILGLEQQLKEA-----RGLAE--GGEAVEARLRDKVHRLEVEKQQLEEALNAARE--EEG 777
Cdd:pfam13779 491 LRAAQERLSEALERgasdeeIAKLMQELREAlddymQALAEqaQQNPQDLQQPDDPNAQEMTQQDLQRMLDRIEElaRSG 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 778 NLAAAKRalevRLDEAQRGLARL--GQEQQALNRALEEEGKQREALRRSkaeLEEQKRLLNRTVDRLNKELEQIGDDSKL 855
Cdd:pfam13779 571 RRAEAQQ----MLSQLQQMLENLqaGQPQQQQQQGQSEMQQAMDELGDL---LREQQQLLDETFRQLQQQGGQQQGQPGQ 643
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1614229825 856 ALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAE 916
Cdd:pfam13779 644 QGQQGQGQQPGQGGQQPGAQMPPQGGAEALGDLAERQQALRRRLEELQDELKELGGKEPGQ 704
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
860-982 |
1.99e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 860 LQAQMEDYKEKARKEvadAQRQAKDWASEAEKNSGGLSRLQDELQRLRQalQTSQAERDTARLDKEL--LAQRLQGLEQE 937
Cdd:COG2433 382 LEELIEKELPEEEPE---AEREKEHEERELTEEEEEIRRLEEQVERLEA--EVEELEAELEEKDERIerLERELSEARSE 456
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1614229825 938 AENKKRfqddKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 982
Cdd:COG2433 457 ERREIR----KDREISRLDREIERLERELEEERERIEELKRKLER 497
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
515-849 |
2.31e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 515 EQLRRSMQDATQDHAALEAERQKMSSLVRELQRELeetseeTGHWQSMFQKNKE-ELRATKQELLQL-----RMEKEEME 588
Cdd:PRK04863 789 EQLRAEREELAERYATLSFDVQKLQRLHQAFSRFI------GSHLAVAFEADPEaELRQLNRRRVELeralaDHESQEQQ 862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 589 EELGEKMEVLQRDLEQARASTRDTHQVEELKKELRRTQGELKELQAEQQNQEVTGRHQNQvLEKQLAALREEADRGRELE 668
Cdd:PRK04863 863 QRSQLEQAKEGLSALNRLLPRLNLLADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQ-LEPIVSVLQSDPEQFEQLK 941
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 669 QQNLQLQKTLqqlrqdceEASKAKVASETEAMvlgQRRA-----TVETTLRETQEENDEFRRRILGLEQQLKEARglaEG 743
Cdd:PRK04863 942 QDYQQAQQTQ--------RDAKQQAFALTEVV---QRRAhfsyeDAAEMLAKNSDLNEKLRQRLEQAEQERTRAR---EQ 1007
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 744 GEAVEARLRDKVHRLevekQQLEEALNAAREeegNLAAAKRALE---VRLDEAQRGLARLGQEQqaLNRALEEEGKQREA 820
Cdd:PRK04863 1008 LRQAQAQLAQYNQVL----ASLKSSYDAKRQ---MLQELKQELQdlgVPADSGAEERARARRDE--LHARLSANRSRRNQ 1078
|
330 340
....*....|....*....|....*....
gi 1614229825 821 LRRSKAELEEQKRLLNRTVDRLNKELEQI 849
Cdd:PRK04863 1079 LEKQLTFCEAEMDNLTKKLRKLERDYHEM 1107
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
714-976 |
2.49e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 42.35 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 714 RETQEENDEFRR---RILGLEQQLKEA-RGLAEggeaVEARLRDkvhrLEVEKQQLEEALNAAREEEgnlAAAKRA---- 785
Cdd:PRK10929 123 RQAQQEQDRAREisdSLSQLPQQQTEArRQLNE----IERRLQT----LGTPNTPLAQAQLTALQAE---SAALKAlvde 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 786 LEV--------------RLDEAQRGLARLGQEQQALNRALEEEgKQRE---ALRRSKAELEEQKRLLNRTVD--RLNKEL 846
Cdd:PRK10929 192 LELaqlsannrqelarlRSELAKKRSQQLDAYLQALRNQLNSQ-RQREaerALESTELLAEQSGDLPKSIVAqfKINREL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 847 EQigddsklALQQlQAQMEDykekarkEVADAQRQAkdwASEAEKNSGGLSRLQDELQ------RLRQALQTsQAER--- 917
Cdd:PRK10929 271 SQ-------ALNQ-QAQRMD-------LIASQQRQA---ASQTLQVRQALNTLREQSQwlgvsnALGEALRA-QVARlpe 331
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1614229825 918 --DTARLDKELLAQRLQGLEQEAENKKRFQDDKARQ-----LKSLEEKVsrLEAELDEEKNTVELL 976
Cdd:PRK10929 332 mpKPQQLDTEMAQLRVQRLRYEDLLNKQPQLRQIRQadgqpLTAEQNRI--LDAQLRTQRELLNSL 395
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
715-1088 |
3.14e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.81 E-value: 3.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 715 ETQEENDEFRRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQ 794
Cdd:PRK01156 343 KKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDIS 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 795 RGLARLGQEQQALNRALEEEGKQREAL------------------RRSKAELEEQKRLLNRTVDRLNKELEQIgDDSKLA 856
Cdd:PRK01156 423 SKVSSLNQRIRALRENLDELSRNMEMLngqsvcpvcgttlgeeksNHIINHYNEKKSRLEEKIREIEIEVKDI-DEKIVD 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 857 LQQLQAQMEdyKEKARKEVADaQRQAKDWASEAEKNSGGLSRLQDelqrlrQALQTSQAERDTARLDKELLAQR----LQ 932
Cdd:PRK01156 502 LKKRKEYLE--SEEINKSINE-YNKIESARADLEDIKIKINELKD------KHDKYEEIKNRYKSLKLEDLDSKrtswLN 572
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 933 GLEQ----EAENKKRFQDDKARQLKSLEEKVSRLEAELDEEK----NTVELLTDRVNRGRDQVDQLrtelmqersarQDL 1004
Cdd:PRK01156 573 ALAVisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKsyidKSIREIENEANNLNNKYNEI-----------QEN 641
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1005 ECDKISLERQNKDLKTRLASSEGFQKP----SASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDE 1080
Cdd:PRK01156 642 KILIEKLRGKIDNYKKQIAEIDSIIPDlkeiTSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDI 721
|
....*...
gi 1614229825 1081 RQHVNDQK 1088
Cdd:PRK01156 722 NETLESMK 729
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
826-994 |
3.36e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 826 AELEEQKRLLN-RTVDRLNKELEQIGDDSKLALQQLQAQMEdykeKARKEVADAQRQAKDWASEAEKNSGGLSRLQDELQ 904
Cdd:COG1579 1 AMPEDLRALLDlQELDSELDRLEHRLKELPAELAELEDELA----ALEARLEAAKTELEDLEKEIKRLELEIEEVEARIK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 905 RLRQALQTSQAERDTARLDKEL--LAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNR 982
Cdd:COG1579 77 KYEEQLGNVRNNKEYEALQKEIesLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEA 156
|
170
....*....|..
gi 1614229825 983 GRDQVDQLRTEL 994
Cdd:COG1579 157 ELEELEAEREEL 168
|
|
| ADIP |
pfam11559 |
Afadin- and alpha -actinin-Binding; This family is found in mammals where it is localized at ... |
1011-1112 |
3.54e-03 |
|
Afadin- and alpha -actinin-Binding; This family is found in mammals where it is localized at cell-cell adherens junctions, and in Sch. pombe and other fungi where it anchors spindle-pole bodies to spindle microtubules. It is a coiled-coil structure, and in pombe, it is required for anchoring the minus end of spindle microtubules to the centrosome equivalent, the spindle-pole body. The name ADIP derives from the family being composed of Afadin- and alpha -Actinin-Binding Proteins localized at Cell-Cell Adherens Junctions.
Pssm-ID: 463295 [Multi-domain] Cd Length: 151 Bit Score: 39.22 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1011 LERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQ 1090
Cdd:pfam11559 44 LQQRDRDLEFRESLNETIRTLEAEIERLQSKIERLKTQLEDLERELALLQAKERQLEKKLKTLEQKLKNEKEELQRLKNA 123
|
90 100
....*....|....*....|..
gi 1614229825 1091 LTLRVKALKRQVDEAEEEIERL 1112
Cdd:pfam11559 124 LQQIKTQFAHEVKKRDREIEKL 145
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
744-1108 |
5.01e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 5.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 744 GEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRR 823
Cdd:COG4372 1 GDRLGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 824 SKAELEEQKRLLNRTVDRLNKELEQIGDDSKLALQQLQA------QMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLS 897
Cdd:COG4372 81 ELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEElqkerqDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 898 RLQDELQRLRQALQTSQAERDTARLDkELLAQRLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLT 977
Cdd:COG4372 161 SLQEELAALEQELQALSEAEAEQALD-ELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 978 DRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKT 1057
Cdd:COG4372 240 DALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLA 319
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1614229825 1058 VLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEE 1108
Cdd:COG4372 320 ALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLSKGAEAGVADG 370
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
285-835 |
5.12e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.18 E-value: 5.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 285 DLLRDQRetappGSADHVKATIYGILREGSSESEASVRRKVSLVLEQMQPLGMVSPASTKALAGQAELTRKMEELQKKLD 364
Cdd:PRK02224 180 RVLSDQR-----GSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 365 EEVKKRQKLEPSRVGLERQLEEKAEECH----RLQELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQLKL 440
Cdd:PRK02224 255 TLEAEIEDLRETIAETEREREELAEEVRdlreRLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 441 KHSQSPDSGKESLLKDLLD-------TRELLEELLEGKQRVEEQLRLRERELTALKGALKE-EVASHDQEVEHVRLQYQR 512
Cdd:PRK02224 335 VAAQAHNEEAESLREDADDleeraeeLREEAAELESELEEAREAVEDRREEIEELEEEIEElRERFGDAPVDLGNAEDFL 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 513 dtEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETS--------EETGHWQSMFQKN--KEELRAtkqELLQLRM 582
Cdd:PRK02224 415 --EELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvEGSPHVETIEEDRerVEELEA---ELEDLEE 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 583 EKEEmeeelgekmevLQRDLEQARASTRDTHQVEELkKELRRTQGELKELQAEQQNQEvtgrhqnqvlEKQLAALREEAD 662
Cdd:PRK02224 490 EVEE-----------VEERLERAEDLVEAEDRIERL-EERREDLEELIAERRETIEEK----------RERAEELRERAA 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 663 rgrELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVEtTLRETQEENDEFRRRILGLEQQLKEargLAE 742
Cdd:PRK02224 548 ---ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREA---LAE 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 743 GGEAVEARLRDKVHRleveKQQLEEALNAAREEE--GNLAAAKRALEvRLDEAQRGLARLGQEQQALNRALEEEGKQREA 820
Cdd:PRK02224 621 LNDERRERLAEKRER----KRELEAEFDEARIEEarEDKERAEEYLE-QVEEKLDELREERDDLQAEIGAVENELEELEE 695
|
570
....*....|....*
gi 1614229825 821 LRRSKAELEEQKRLL 835
Cdd:PRK02224 696 LRERREALENRVEAL 710
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
872-1143 |
6.45e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 40.86 E-value: 6.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 872 RKEVADAQRQAKDWASEAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELlaqrlqGLEQEAENKKRFQDDKARQ 951
Cdd:pfam05483 161 KETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHF------KLKEDHEKIQHLEEEYKKE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 952 LKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKP 1031
Cdd:pfam05483 235 INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKA 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1032 SASLSQLESQN--QLLQER---LQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAE 1106
Cdd:pfam05483 315 LEEDLQIATKTicQLTEEKeaqMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELE 394
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1614229825 1107 E----------EIERLDSLRKKAQRELEEQHEVnEQLQARIKSLEKD 1143
Cdd:pfam05483 395 EmtkfknnkevELEELKKILAEDEKLLDEKKQF-EKIAEELKGKEQE 440
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
764-930 |
6.63e-03 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 40.10 E-value: 6.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 764 QLEEALNAAREEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLN 843
Cdd:pfam00529 55 DYQAALDSAEAQLAKAQAQVARLQAELDRLQALESELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRVLAP 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 844 keleqIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNsggLSRLQDELQRLRQALQTSQAERDTARLD 923
Cdd:pfam00529 135 -----IGGISRESLVTAGALVAQAQANLLATVAQLDQIYVQITQSAAEN---QAEVRSELSGAQLQIAEAEAELKLAKLD 206
|
....*..
gi 1614229825 924 KELLAQR 930
Cdd:pfam00529 207 LERTEIR 213
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
799-1142 |
6.79e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.66 E-value: 6.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 799 RLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDrlNKELEQIGDDSKLALQQLQAQMEDYKEKARKEVADA 878
Cdd:PLN02939 30 RLAVSCRARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDE--NGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 879 QRQAKDWASEAEKNSGGLSRLQdeLQRLRQALQTsqAERDTARLDKELLaQRLQGLEQEAENKKRFQddkaRQLKSLEEK 958
Cdd:PLN02939 108 IAAIDNEQQTNSKDGEQLSDFQ--LEDLVGMIQN--AEKNILLLNQARL-QALEDLEKILTEKEALQ----GKINILEMR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 959 VSRLEAELD---EEKNTVELLtdrvnrgRDQVDQLRTELMQERSArqdlecdkislerqnkdlktrlaSSEGFQKPSASL 1035
Cdd:PLN02939 179 LSETDARIKlaaQEKIHVEIL-------EEQLEKLRNELLIRGAT-----------------------EGLCVHSLSKEL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1036 SQLESQNQLLQ-----------------ERLQAEEREKTVLQSTNRKLERRvkeLSIQIDDERQHVNDQKDQLTLRVKAL 1098
Cdd:PLN02939 229 DVLKEENMLLKddiqflkaelievaeteERVFKLEKERSLLDASLRELESK---FIVAQEDVSKLSPLQYDCWWEKVENL 305
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1099 -------KRQVDEAEEEIERLDSLRKKAQRELEEQHEVN---------EQLQARIKSLEK 1142
Cdd:PLN02939 306 qdlldraTNQVEKAALVLDQNQDLRDKVDKLEASLKEANvskfssykvELLQQKLKLLEE 365
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
950-1169 |
6.98e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 6.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 950 RQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRgRDQVDQLRTELmQERSARQDLEcDKISLERQNKDLKTRLASSEgfq 1029
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRREREK-AERYQALLKEK-REYEGYELLK-EKEALERQKEAIERQLASLE--- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1030 kpsASLSQLESQNQLLQERLQAEERektVLQSTNRKLERRVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEI 1109
Cdd:TIGR02169 251 ---EELEKLTEEISELEKRLEEIEQ---LLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERL 324
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1110 ERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKdawRKASRSAAESALKQEGLSSDEEFD 1169
Cdd:TIGR02169 325 AKLEAEIDKLLAEIEELEREIEEERKRRDKLTE---EYAELKEELEDLRAELEEVDKEFA 381
|
|
| HAUS5 |
pfam14817 |
HAUS augmin-like complex subunit 5; This family includes HAUS augmin-like complex subunit 5. ... |
830-1142 |
8.68e-03 |
|
HAUS augmin-like complex subunit 5; This family includes HAUS augmin-like complex subunit 5. The HAUS augmin-like complex contributes to mitotic spindle assembly, maintenance of chromosome integrity and completion of cytokinesis.
Pssm-ID: 464332 [Multi-domain] Cd Length: 643 Bit Score: 40.41 E-value: 8.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 830 EQKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQmEDYKEKARKEVADAQR-----QAKDWASEAEKN--SGGLSRLQDE 902
Cdd:pfam14817 77 ARRLELQKEIERLRAEISRLDKQLEARELELSRE-EAERERALDEISDSRHrqlllEAYDQQCEEARKilAEDHQRLQGQ 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 903 LQRLRQALQtsQAERDTARLDKELLAQRLQGLEQEAEN------KKRFQDDKARQLKSLEEKVSRLEAELDEEKNTV--- 973
Cdd:pfam14817 156 LQQLRDAAR--KAEKEVVFGDSKGSKSSVIALEPQVLRdvreacELRAQFLQELLESSLKAYEGSGIHMNRDQRRAViqh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 974 ---ELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQ 1050
Cdd:pfam14817 234 wlsAVETLLTSHPPSHLLQALEHLAAREKTAIQEETESLDVRADAEALRFRYESNHLLDVSSDESSDLPSVRQLLERQWA 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 1051 AEEREKTVLQSTNRKLERRVKELSIQIDDERQHVNDQKDqlTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQHEVN 1130
Cdd:pfam14817 314 HVQQFLNELAETRSRCQQLQARLQGLKDEAELESLGIGD--TSQNDSLLRQVLELELQAAGLAASRDTLRSECQQLNKLA 391
|
330
....*....|..
gi 1614229825 1131 EQLQARIKSLEK 1142
Cdd:pfam14817 392 RERQEALRSLQK 403
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
560-891 |
9.38e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.11 E-value: 9.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 560 QSMFQK-NKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRdleQARASTRDTHQVEELKKELRRTQGELKELQAEQQN 638
Cdd:pfam17380 290 QEKFEKmEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDR---QAAIYAEQERMAMERERELERIRQEERKRELERIR 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 639 QEvtgrhqnqvlekqlaALREEADRGRELEQQNLQLQKTLQQLRQDCEEASKAKVASETEAMVLGQRRATVETTLRETQE 718
Cdd:pfam17380 367 QE---------------EIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 719 ENDEFRRRIlgleqqlkearglaeggEAVEARLRDKVHRLEVEKQQLEEALNAAREEEgnlaaAKRALEVRLDEAQRGLA 798
Cdd:pfam17380 432 ARQREVRRL-----------------EEERAREMERVRLEEQERQQQVERLRQQEEER-----KRKKLELEKEKRDRKRA 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1614229825 799 R------LGQEQQALNRALEEEGKQREALR-----RSKAELEEQKRLLNRTVDRLNKELEQigddsklaLQQLQAQMEDY 867
Cdd:pfam17380 490 EeqrrkiLEKELEERKQAMIEEERKRKLLEkemeeRQKAIYEEERRREAEEERRKQQEMEE--------RRRIQEQMRKA 561
|
330 340
....*....|....*....|....*
gi 1614229825 868 -KEKARKEVADAQRQAKDWASEAEK 891
Cdd:pfam17380 562 tEERSRLEAMEREREMMRQIVESEK 586
|
|
| |
