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Conserved domains on  [gi|160690108|gb|ABX45901|]
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xanthine dehydrogenase, partial [Eurya japonica]

Protein Classification

xanthine dehydrogenase family( domain architecture ID 1000576)

xanthine dehydrogenase family similar to Homo sapiens xanthine dehydrogenase/oxidase which catalyzes the oxidation of hypoxanthine to xanthine, as well as the oxidation of xanthine to uric acid

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02906 super family cl33596
xanthine dehydrogenase
18-404 0e+00

xanthine dehydrogenase


The actual alignment was detected with superfamily member PLN02906:

Pssm-ID: 215491 [Multi-domain]  Cd Length: 1319  Bit Score: 662.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   18 ILRSV-DAPTEEKIEESLEGNLCRCTGYRPIVDAFRVFAKTDDMLYTDAYLNSNAKGEFVCPSTGKPCSCRSETVCKEDN 96
Cdd:PLN02906  104 LLRSSkTPPTEEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDALYTGVSSLSLQDGEPICPSTGKPCSCGSKTTSAAGT 183
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   97 ieqkkACGDSYEHISYSEIDGRTYTDKELIFPPELLLRKLTYLNLSGFGGLKWYRSVRLQHVLDIKSRYPDTKLVVGNTE 176
Cdd:PLN02906  184 -----CKSDRFQPISYSEIDGSWYTEKELIFPPELLLRKLTPLKLLGNGGLTWYRPTSLQHLLELKAEYPDAKLVVGNTE 258
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  177 IGIEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRATKEQASHYTSSCQAFIEQIKWFAGTQIK 256
Cdd:PLN02906  259 VGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGAAVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIR 338
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  257 NVASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGNIRTTAAENFFLGYRKVDLASNEILLSIFLPWTRPFEFVKEFKQ 336
Cdd:PLN02906  339 NVASIGGNICTASPISDLNPLWMAAGATFVIISCDGDIRSVPASDFFLGYRKVDLKPDEILLSVFLPWTRPFEYVKEFKQ 418
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 160690108  337 AHRRDDDIAIVNAGMRVCLEEKNEKWVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHELSLGALEV 404
Cdd:PLN02906  419 AHRRDDDIAIVNAGMRVKLEEKDGEWIVSDASIAYGGVAPLSVSARKTEEFLIGKPWNKETLQDALKV 486
 
Name Accession Description Interval E-value
PLN02906 PLN02906
xanthine dehydrogenase
18-404 0e+00

xanthine dehydrogenase


Pssm-ID: 215491 [Multi-domain]  Cd Length: 1319  Bit Score: 662.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   18 ILRSV-DAPTEEKIEESLEGNLCRCTGYRPIVDAFRVFAKTDDMLYTDAYLNSNAKGEFVCPSTGKPCSCRSETVCKEDN 96
Cdd:PLN02906  104 LLRSSkTPPTEEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDALYTGVSSLSLQDGEPICPSTGKPCSCGSKTTSAAGT 183
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   97 ieqkkACGDSYEHISYSEIDGRTYTDKELIFPPELLLRKLTYLNLSGFGGLKWYRSVRLQHVLDIKSRYPDTKLVVGNTE 176
Cdd:PLN02906  184 -----CKSDRFQPISYSEIDGSWYTEKELIFPPELLLRKLTPLKLLGNGGLTWYRPTSLQHLLELKAEYPDAKLVVGNTE 258
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  177 IGIEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRATKEQASHYTSSCQAFIEQIKWFAGTQIK 256
Cdd:PLN02906  259 VGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGAAVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIR 338
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  257 NVASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGNIRTTAAENFFLGYRKVDLASNEILLSIFLPWTRPFEFVKEFKQ 336
Cdd:PLN02906  339 NVASIGGNICTASPISDLNPLWMAAGATFVIISCDGDIRSVPASDFFLGYRKVDLKPDEILLSVFLPWTRPFEYVKEFKQ 418
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 160690108  337 AHRRDDDIAIVNAGMRVCLEEKNEKWVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHELSLGALEV 404
Cdd:PLN02906  419 AHRRDDDIAIVNAGMRVKLEEKDGEWIVSDASIAYGGVAPLSVSARKTEEFLIGKPWNKETLQDALKV 486
xanthine_xdhA TIGR02963
xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit ...
19-403 2.96e-76

xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 274365 [Multi-domain]  Cd Length: 467  Bit Score: 244.11  E-value: 2.96e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   19 LRSVDAPTEEKIEESLEGNLCRCTGYRPIVDAfrvfaktddmlytdaylnsnakGEFVCpstGKPCSCRSeTVCKEDNIE 98
Cdd:TIGR02963 122 YKNSPAPSRADIEDALQGNLCRCTGYRPILDA----------------------AEAAF---DYPCSDPL-DADRAPIIE 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   99 QKKACGDsYEHISYseidgrtytdkelifppelllrkltylnlsGFGGLKWYRSVRLQHVLDIKSRYPDTKLVVGNTEIG 178
Cdd:TIGR02963 176 RLRALRA-GETVEL------------------------------NFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVG 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  179 IEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRATKEqashytsscqaFIEQIKWFAGTQIKNV 258
Cdd:TIGR02963 225 LWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKRYPE-----------LGELLRRFASLQIRNA 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  259 ASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGNiRTTAAENFFLGYRKVDLASNEILLSIFLPWTRPFEFVKEFKQAH 338
Cdd:TIGR02963 294 GTLGGNIANGSPIGDSPPALIALGARLTLRKGEGR-RTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPGERFRAYKISK 372
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 160690108  339 RRDDDIAIVNAGMRVCLEEKnekwVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHELSLGALE 403
Cdd:TIGR02963 373 RFDDDISAVCAAFNLELDGG----VVAEIRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMA 433
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
23-396 4.16e-66

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 217.70  E-value: 4.16e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  23 DAPTEEKIEESLEGNLCRCTGYRPIVDA-FRVFAktddmlytdaylnsnakgefvCPSTGKPCSCRSETVckedniEQKK 101
Cdd:COG4630  125 PAPDRADIEDALSGNLCRCTGYRPIIDAaRAMAE---------------------APAPDPFAADRAAVA------AALR 177
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 102 ACGDSyEHISYSEIDGRtytdkelifppelllrkltylnlsgfgglkWYRSVRLQHVLDIKSRYPDTKLVVGNTEIGIEM 181
Cdd:COG4630  178 ALADG-ETVELGAGGSR------------------------------FLAPATLDELAALLAAHPDARLVAGATDVGLWV 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 182 RLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRatkeqasHYTsscqAFIEQIKWFAGTQIKNVASV 261
Cdd:COG4630  227 TKQLRDLPPVIFLGRVAELRRIEETDDGLEIGAAVTLSDAEAALAA-------HFP----ELAELLRRFASRQIRNAGTL 295
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 262 GGNICTASPISDLNPIWMAAGAKFRIIDCKGnIRTTAAENFFLGYRKVDLASNEILLSIFLPWTRPFEFVKEFKQAHRRD 341
Cdd:COG4630  296 GGNIANGSPIGDSPPALIALGAELVLRSGDG-RRTLPLEDFFLGYRKTDLQPGEFVEAIRIPLPAAGQRLRAYKVSKRFD 374
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 160690108 342 DDIAIVNAGMRVCLEEKnekwVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHE 396
Cdd:COG4630  375 DDISAVCAAFALTLDDG----TVTEARIAFGGMAATPKRARAAEAALLGQPWTEA 425
FAD_binding_5 pfam00941
FAD binding domain in molybdopterin dehydrogenase;
148-324 4.93e-58

FAD binding domain in molybdopterin dehydrogenase;


Pssm-ID: 460007 [Multi-domain]  Cd Length: 170  Bit Score: 186.98  E-value: 4.93e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  148 KWYRSVRLQHVLDIKSRYPDTKLVVGNTEIGIEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRR 227
Cdd:pfam00941   4 GYYRPASLAEALELLAAGPDAKLVAGGTSLGPLMKLRLARPDHLIDINGIPELRGIEETDGGLEIGAAVTLSEIAEPLLR 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  228 AtkeqashytsSCQAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGnIRTTAAENFFLGYR 307
Cdd:pfam00941  84 E----------AYPALSEALRKIASPQIRNVGTIGGNIANASPISDLPPALLALDAKVELRSGEG-ERTVPLEDFFLGYG 152
                         170
                  ....*....|....*..
gi 160690108  308 KVDLASNEILLSIFLPW 324
Cdd:pfam00941 153 KTALEPGELITAVIIPL 169
CO_deh_flav_C smart01092
CO dehydrogenase flavoprotein C-terminal domain;
334-401 2.03e-12

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 215021 [Multi-domain]  Cd Length: 102  Bit Score: 63.02  E-value: 2.03e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 160690108   334 FKQAHRRDDDIAIVNAGMRVCLEEKnekwVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHELSLGA 401
Cdd:smart01092   2 YKKSRRRDGDIALVSAAVALTLDGG----RVTEARIALGGVAPTPKRAAEAEAALVGKPLTDEALARA 65
 
Name Accession Description Interval E-value
PLN02906 PLN02906
xanthine dehydrogenase
18-404 0e+00

xanthine dehydrogenase


Pssm-ID: 215491 [Multi-domain]  Cd Length: 1319  Bit Score: 662.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   18 ILRSV-DAPTEEKIEESLEGNLCRCTGYRPIVDAFRVFAKTDDMLYTDAYLNSNAKGEFVCPSTGKPCSCRSETVCKEDN 96
Cdd:PLN02906  104 LLRSSkTPPTEEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDALYTGVSSLSLQDGEPICPSTGKPCSCGSKTTSAAGT 183
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   97 ieqkkACGDSYEHISYSEIDGRTYTDKELIFPPELLLRKLTYLNLSGFGGLKWYRSVRLQHVLDIKSRYPDTKLVVGNTE 176
Cdd:PLN02906  184 -----CKSDRFQPISYSEIDGSWYTEKELIFPPELLLRKLTPLKLLGNGGLTWYRPTSLQHLLELKAEYPDAKLVVGNTE 258
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  177 IGIEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRATKEQASHYTSSCQAFIEQIKWFAGTQIK 256
Cdd:PLN02906  259 VGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGAAVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIR 338
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  257 NVASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGNIRTTAAENFFLGYRKVDLASNEILLSIFLPWTRPFEFVKEFKQ 336
Cdd:PLN02906  339 NVASIGGNICTASPISDLNPLWMAAGATFVIISCDGDIRSVPASDFFLGYRKVDLKPDEILLSVFLPWTRPFEYVKEFKQ 418
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 160690108  337 AHRRDDDIAIVNAGMRVCLEEKNEKWVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHELSLGALEV 404
Cdd:PLN02906  419 AHRRDDDIAIVNAGMRVKLEEKDGEWIVSDASIAYGGVAPLSVSARKTEEFLIGKPWNKETLQDALKV 486
xanthine_xdhA TIGR02963
xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit ...
19-403 2.96e-76

xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 274365 [Multi-domain]  Cd Length: 467  Bit Score: 244.11  E-value: 2.96e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   19 LRSVDAPTEEKIEESLEGNLCRCTGYRPIVDAfrvfaktddmlytdaylnsnakGEFVCpstGKPCSCRSeTVCKEDNIE 98
Cdd:TIGR02963 122 YKNSPAPSRADIEDALQGNLCRCTGYRPILDA----------------------AEAAF---DYPCSDPL-DADRAPIIE 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   99 QKKACGDsYEHISYseidgrtytdkelifppelllrkltylnlsGFGGLKWYRSVRLQHVLDIKSRYPDTKLVVGNTEIG 178
Cdd:TIGR02963 176 RLRALRA-GETVEL------------------------------NFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVG 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  179 IEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRATKEqashytsscqaFIEQIKWFAGTQIKNV 258
Cdd:TIGR02963 225 LWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKRYPE-----------LGELLRRFASLQIRNA 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  259 ASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGNiRTTAAENFFLGYRKVDLASNEILLSIFLPWTRPFEFVKEFKQAH 338
Cdd:TIGR02963 294 GTLGGNIANGSPIGDSPPALIALGARLTLRKGEGR-RTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPGERFRAYKISK 372
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 160690108  339 RRDDDIAIVNAGMRVCLEEKnekwVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHELSLGALE 403
Cdd:TIGR02963 373 RFDDDISAVCAAFNLELDGG----VVAEIRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMA 433
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
23-396 4.16e-66

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 217.70  E-value: 4.16e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  23 DAPTEEKIEESLEGNLCRCTGYRPIVDA-FRVFAktddmlytdaylnsnakgefvCPSTGKPCSCRSETVckedniEQKK 101
Cdd:COG4630  125 PAPDRADIEDALSGNLCRCTGYRPIIDAaRAMAE---------------------APAPDPFAADRAAVA------AALR 177
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 102 ACGDSyEHISYSEIDGRtytdkelifppelllrkltylnlsgfgglkWYRSVRLQHVLDIKSRYPDTKLVVGNTEIGIEM 181
Cdd:COG4630  178 ALADG-ETVELGAGGSR------------------------------FLAPATLDELAALLAAHPDARLVAGATDVGLWV 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 182 RLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRatkeqasHYTsscqAFIEQIKWFAGTQIKNVASV 261
Cdd:COG4630  227 TKQLRDLPPVIFLGRVAELRRIEETDDGLEIGAAVTLSDAEAALAA-------HFP----ELAELLRRFASRQIRNAGTL 295
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 262 GGNICTASPISDLNPIWMAAGAKFRIIDCKGnIRTTAAENFFLGYRKVDLASNEILLSIFLPWTRPFEFVKEFKQAHRRD 341
Cdd:COG4630  296 GGNIANGSPIGDSPPALIALGAELVLRSGDG-RRTLPLEDFFLGYRKTDLQPGEFVEAIRIPLPAAGQRLRAYKVSKRFD 374
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 160690108 342 DDIAIVNAGMRVCLEEKnekwVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHE 396
Cdd:COG4630  375 DDISAVCAAFALTLDDG----TVTEARIAFGGMAATPKRARAAEAALLGQPWTEA 425
mam_aldehyde_ox TIGR02969
aldehyde oxidase; Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, ...
18-397 3.75e-65

aldehyde oxidase; Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.


Pssm-ID: 132014 [Multi-domain]  Cd Length: 1330  Bit Score: 225.66  E-value: 3.75e-65
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108    18 ILRSVDAPTEEKIEESLEGNLCRCTGYRPIVDAFRVFAKTDDMLytdaylnSNAKGEFVCPSTGKPCSCRSEtvckedni 97
Cdd:TIGR02969  124 LLRNHPEPTLDQLTDALGGNLCRCTGYRPIIDACKTFCKTSGCC-------QSKENGVCCLDQGINGLPEFE-------- 188
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108    98 EQKKACGDSYEHISYSEIDgrtyTDKELIFPPELLL---RKLTYLNLSGFGGLKWYRSVRLQHVLDIKSRYPDTKLVVGN 174
Cdd:TIGR02969  189 EGDETSPELFSEEEFLPLD----PTQELIFPPELMRmaeKQPQRTRVFYSERMMWISPVTLKELLEAKFKYPQAPVVMGN 264
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   175 TEIGIEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRATKEQASHYTSSCQAFIEQIKWFAGTQ 254
Cdd:TIGR02969  265 TSVGPEVKFKGVFHPVIISPDRIEELSVVNHTGDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQ 344
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   255 IKNVASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGNIRTTAAENFFLGYRKVDLASNEILLSIFLPWTRPFEFVKEF 334
Cdd:TIGR02969  345 IRNMASLGGHIISRHLDSDLNPLLAVGNCTLNLLSKEGKRQIPLSEQFLSKCPDADLKPQEILVSVNIPYSRKWEFVSAF 424
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 160690108   335 KQAHRRDDDIAIVNAGMRVCLEEKNEkwVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHEL 397
Cdd:TIGR02969  425 RQAQRQQNALAIVNSGMRVFFGEGDG--IIRELSISYGGVGPTTICAKNSCQKLIGRPWNEEM 485
FAD_binding_5 pfam00941
FAD binding domain in molybdopterin dehydrogenase;
148-324 4.93e-58

FAD binding domain in molybdopterin dehydrogenase;


Pssm-ID: 460007 [Multi-domain]  Cd Length: 170  Bit Score: 186.98  E-value: 4.93e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  148 KWYRSVRLQHVLDIKSRYPDTKLVVGNTEIGIEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRR 227
Cdd:pfam00941   4 GYYRPASLAEALELLAAGPDAKLVAGGTSLGPLMKLRLARPDHLIDINGIPELRGIEETDGGLEIGAAVTLSEIAEPLLR 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  228 AtkeqashytsSCQAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGnIRTTAAENFFLGYR 307
Cdd:pfam00941  84 E----------AYPALSEALRKIASPQIRNVGTIGGNIANASPISDLPPALLALDAKVELRSGEG-ERTVPLEDFFLGYG 152
                         170
                  ....*....|....*..
gi 160690108  308 KVDLASNEILLSIFLPW 324
Cdd:pfam00941 153 KTALEPGELITAVIIPL 169
CutB COG1319
Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit [Energy production and conversion] ...
155-397 1.09e-39

Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit [Energy production and conversion]; Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 440930 [Multi-domain]  Cd Length: 285  Bit Score: 142.95  E-value: 1.09e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 155 LQHVLDIKSRY-PDTKLVVGNTEIGIEMRLKGIQYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLT--VFRRAtke 231
Cdd:COG1319   12 LEEALALLAEHgPDARVLAGGTDLLPLMKLRLARPEHLVDINRIPELRGIEEEGGGLRIGALVTHAELAAspLVRER--- 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 232 qashytssCQAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGNiRTTAAENFFLGYRKVDL 311
Cdd:COG1319   89 --------YPLLAEAARAIASPQIRNRGTIGGNLANADPAADLPPALLALDATVELAGPDGE-RTIPAADFFLGPGETAL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 312 ASNEILLSIFLP---WTRPFEFVkefKQAHRRDDDIAIVNAGMRVCLEEKnekwVVSEASIAYGGVAPLSVSAVKTKNFL 388
Cdd:COG1319  160 EPGELITAVRLPappAGAGSAYL---KVGRRASDAIALVSVAVALRLDGG----TIRDARIALGGVAPTPWRAREAEAAL 232

                 ....*....
gi 160690108 389 IAKTWNHEL 397
Cdd:COG1319  233 AGKPLSEEA 241
PLN00192 PLN00192
aldehyde oxidase
31-401 6.13e-26

aldehyde oxidase


Pssm-ID: 215096 [Multi-domain]  Cd Length: 1344  Bit Score: 110.58  E-value: 6.13e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108   31 EESLEGNLCRCTGYRPIVDAFRVFAKTDDMlyTDAYLNSNAKgefvcpstgkpcscrsetvcKEDNIEQKKACGDSYEHi 110
Cdd:PLN00192  152 EKAVSGNLCRCTGYRPIVDACKSFAADVDI--EDLGLNSFWK--------------------KGESEEAKLSKLPPYNH- 208
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  111 syseidgrtytDKELIFPPELLLRKLTYLNLSGFGGLKWYRSV---RLQHVLD-IKSRYPDTKLVVGNTEIGIEMRLKgi 186
Cdd:PLN00192  209 -----------SDHICTFPEFLKKEIKSSLLLDSSRYRWYTPVsveELQSLLEsNNFDGVSVKLVVGNTGTGYYKDEE-- 275
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  187 QYQVLTCVAYVPELNKVSVKDDGLEIGAAVRLSELLTVFRRATKEQ------ASHytsscqafIEQIkwfAGTQIKNVAS 260
Cdd:PLN00192  276 LYDKYIDIRHIPELSMIRRDEKGIEIGAVVTISKAIEALREESKSEyvfkkiADH--------MEKI---ASRFVRNTGS 344
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108  261 VGGNICTAS----PiSDLNPIWMAAGAKFRIIDCKGNIRTTAAEnfFLGYRKVDlaSNEILLSIFLP-WTRPFE-----F 330
Cdd:PLN00192  345 IGGNLVMAQrkqfP-SDIATILLAAGSTVNIQNASKREKLTLEE--FLERPPLD--SKSLLLSVEIPsWTSSSGsdtklL 419
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 160690108  331 VKEFKQAHR-RDDDIAIVNAGM--RVCLEEKNEKWVVSEASIAYGGV-APLSVSAVKTKNFLIAKTWNHELSLGA 401
Cdd:PLN00192  420 FETYRAAPRpLGNALPYLNAAFlaEVSQDASSGGIVVNDCRLAFGAYgTKHAIRARKVEEFLTGKVLSDSVLYEA 494
PRK09971 PRK09971
xanthine dehydrogenase subunit XdhB; Provisional
150-397 3.01e-24

xanthine dehydrogenase subunit XdhB; Provisional


Pssm-ID: 182175 [Multi-domain]  Cd Length: 291  Bit Score: 101.27  E-value: 3.01e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 150 YRSVRLQHVLDIKSRYPDTKLVVGNTEIGIEMRLKGIQYQVLTCVAYVPELNKVSVKDDG-LEIGAAVRLSELLT--VFR 226
Cdd:PRK09971   8 HEAATLEEAIELLADNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGsIRIGAATTFTQIIEdpIIQ 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 227 RATKEQAshytsscqafiEQIKWFAGTQIKNVASVGGNICTASPISDLNPIWMAAGAKFRIIDCKGnIRTTAAENFFLGY 306
Cdd:PRK09971  88 KHLPALA-----------EAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSPNG-VRFVPINGFYTGP 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160690108 307 RKVDLASNEILLSIFLPwTRPFEFVKE--FKQAHRRDDDIAIVnaGMRVCLEEKNEKwvVSEASIAYGGVAPLSVSAVKT 384
Cdd:PRK09971 156 GKVSLEHDEILVAFIIP-PEPYEHAGGayIKYAMRDAMDIATI--GCAVLCRLDNGN--FEDLRLAFGVAAPTPIRCQHA 230
                        250
                 ....*....|...
gi 160690108 385 KNFLIAKTWNHEL 397
Cdd:PRK09971 231 EQTAKGAPLNLET 243
CO_deh_flav_C pfam03450
CO dehydrogenase flavoprotein C-terminal domain;
334-397 2.89e-17

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 460921 [Multi-domain]  Cd Length: 102  Bit Score: 76.83  E-value: 2.89e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 160690108  334 FKQAHRRDDDIAIVNAGMRVCLEEknekWVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHEL 397
Cdd:pfam03450   3 YKQAKRRDDDIAIVNAAFRVRLDG----GTVEDARIAFGGVAPTPIRATEAEAALIGKPWDEET 62
CO_deh_flav_C smart01092
CO dehydrogenase flavoprotein C-terminal domain;
334-401 2.03e-12

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 215021 [Multi-domain]  Cd Length: 102  Bit Score: 63.02  E-value: 2.03e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 160690108   334 FKQAHRRDDDIAIVNAGMRVCLEEKnekwVVSEASIAYGGVAPLSVSAVKTKNFLIAKTWNHELSLGA 401
Cdd:smart01092   2 YKKSRRRDGDIALVSAAVALTLDGG----RVTEARIALGGVAPTPKRAAEAEAALVGKPLTDEALARA 65
Fer2_2 pfam01799
[2Fe-2S] binding domain;
16-51 2.79e-12

[2Fe-2S] binding domain;


Pssm-ID: 460336 [Multi-domain]  Cd Length: 73  Bit Score: 61.68  E-value: 2.79e-12
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 160690108   16 AIILRSVDAPTEEKIEESLEGNLCRCTGYRPIVDAF 51
Cdd:pfam01799  38 ALLERNPPPPTEAEIREALSGNLCRCTGYRRIVDAV 73
CutS COG2080
Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and ...
18-56 1.52e-09

Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441683 [Multi-domain]  Cd Length: 155  Bit Score: 56.25  E-value: 1.52e-09
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 160690108  18 ILRSVDAPTEEKIEESLEGNLCRCTGYRPIVDAFRVFAK 56
Cdd:COG2080  113 LLDENPNPTEEEIREALSGNLCRCTGYVRIVRAVKRAAA 151
PRK09908 PRK09908
xanthine dehydrogenase iron sulfur-binding subunit XdhC;
26-58 3.82e-04

xanthine dehydrogenase iron sulfur-binding subunit XdhC;


Pssm-ID: 182139 [Multi-domain]  Cd Length: 159  Bit Score: 40.67  E-value: 3.82e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 160690108  26 TEEKIEESLEGNLCRCTGYRPIVDAFRVFAKTD 58
Cdd:PRK09908 127 TITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK 159
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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