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Conserved domains on  [gi|159524436|ref|YP_001542722|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Anabrus simplex]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 2.92e-40

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 129.51  E-value: 2.92e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   3 IMFIVSSFTVILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIMN 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 159524436  83 WSNILSWSIISMMFLLILLLGLYHEWNQGALEW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 2.92e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 129.51  E-value: 2.92e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   3 IMFIVSSFTVILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIMN 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 159524436  83 WSNILSWSIISMMFLLILLLGLYHEWNQGALEW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.07e-21

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 81.70  E-value: 1.07e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   19 MMLASILSKKTINdREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIMNwSNILSWSIISMMFLL 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 159524436   99 ILLLGLYHEWNQGALE 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-115 2.22e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 74.00  E-value: 2.22e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   2 WIMFIVSSFTVILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIM 81
Cdd:COG0838    5 YLPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF 84

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 159524436  82 NwsNILSWSIISMM-FLLILLLGLYHEWNQGALEW 115
Cdd:COG0838   85 R--ELGWFGLIEMLvFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 2.92e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 129.51  E-value: 2.92e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   3 IMFIVSSFTVILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIMN 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 159524436  83 WSNILSWSIISMMFLLILLLGLYHEWNQGALEW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 2.69e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 127.28  E-value: 2.69e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSFTVILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 159524436  81 MNWSNILSWSIISMMFLLILLLGLYHEWNQGALEWAS 117
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 2.22e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 109.70  E-value: 2.22e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSFTVILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 159524436  81 MNWSNILSWSIISMMFLLILLLGLYHEWNQGALEWA 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.18e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 100.44  E-value: 1.18e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSFTVILTSIVMMLASILSKKTInDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 159524436  81 MNWSNILSWSIISMMFLLILLLGLYHEWNQGALEWA 116
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-117 1.26e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 100.32  E-value: 1.26e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSFTVILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 159524436  81 MNWSNILSWSIISMMFLLILLLGLYHEWNQGALEWAS 117
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWSS 117
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-116 4.15e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 93.79  E-value: 4.15e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSftviLTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:MTH00113   3 LISMLTISL----ALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 78

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 159524436  81 MNWSNILSWSIISMMFLLILLLGLYHEWNQGALEWA 116
Cdd:MTH00113  79 INLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 4.18e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 93.83  E-value: 4.18e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSFTVILTSIVMMLASILSkktinDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPviii 80
Cdd:MTH00136   5 TTILTITIALSLILAIVSFWLPQMTP-----DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLP---- 75

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 159524436  81 MNWSNILSWSIISMMFLLILLLG----LYHEWNQGALEWA 116
Cdd:MTH00136  76 LPWGDQLPSPLLTFFWATAVLILltlgLIYEWLQGGLEWA 115
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 12-116 9.58e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 92.70  E-value: 9.58e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436  12 VILTSIVMMLASILSKKTINdREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIMNWSNILSWSI 91
Cdd:MTH00106  11 TLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLT 89

                         90       100
                 ....*....|....*....|....*
gi 159524436  92 ISMMFLLILLLGLYHEWNQGALEWA 116
Cdd:MTH00106  90 MALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 14-116 7.93e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 90.44  E-value: 7.93e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436  14 LTSIVMMLASILSKKTIN----------DREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLP---VIII 80
Cdd:MTH00069   1 LIMLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPtpwASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 159524436  81 MNWSNILSWSIISMMFLLILLLglyHEWNQGALEWA 116
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLI---YEWIQGGLEWA 113
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 2.00e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 86.88  E-value: 2.00e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSFTVILTSIVMMLASILSKkTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPK-VNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 159524436  81 MNWSNILSWSIisMMFLLILLLGLYHEWNQGALEW 115
Cdd:MTH00203  80 NQLSSLSLLLA--FLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.07e-21

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 81.70  E-value: 1.07e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   19 MMLASILSKKTINdREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIMNwSNILSWSIISMMFLL 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 159524436   99 ILLLGLYHEWNQGALE 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-115 2.39e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 76.64  E-value: 2.39e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   4 MFIVSSFTVILTSIVMMLASILSKKtINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIMNW 83
Cdd:MTH00018   3 LFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQ 81

                         90       100       110
                 ....*....|....*....|....*....|..
gi 159524436  84 SNILSWSIIsMMFLLILLLGLYHEWNQGALEW 115
Cdd:MTH00018  82 IAPFGFWTM-VGFLFILTLGLIYEWIKGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-115 2.22e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 74.00  E-value: 2.22e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   2 WIMFIVSSFTVILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIM 81
Cdd:COG0838    5 YLPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF 84

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 159524436  82 NwsNILSWSIISMM-FLLILLLGLYHEWNQGALEW 115
Cdd:COG0838   85 R--ELGWFGLIEMLvFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 12-116 3.05e-17

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 71.43  E-value: 3.05e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436  12 VILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPviiimnWS---NILS 88
Cdd:PRK06602  18 AIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFP------WAvsfREIG 91

                         90       100       110
                 ....*....|....*....|....*....|
gi 159524436  89 W-SIISMM-FLLILLLGLYHEWNQGALEWA 116
Cdd:PRK06602  92 WlGFVEAMiFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-115 3.16e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 71.28  E-value: 3.16e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSFTVILTSIVMMLASILSKKTiNDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:MTH00055   5 FLGIFILLLFSIGLSTVISGASYIVGVKQ-PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVV 83

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 159524436  81 MNWSNILSWSIIsMMFLLILLLGLYHEWNQGALEW 115
Cdd:MTH00055  84 YNQIGLFGFWVM-YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 12-115 1.36e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 64.57  E-value: 1.36e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436  12 VILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIMNWSNILSWSI 91
Cdd:MTH00030  20 LLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWI 99

                         90       100
                 ....*....|....*....|....
gi 159524436  92 ISMMFLLILLLGLYhEWNQGALEW 115
Cdd:MTH00030 100 VYTFLIVLAIGLAY-EWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 2-115 5.59e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 47.29  E-value: 5.59e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   2 WIMFIVSSFTVILTSIVMMLASILSKktinDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIIM 81
Cdd:CHL00022  11 WAFLIISSLIPILAFLISGLLAPISK----GPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSF 86

                         90       100       110
                 ....*....|....*....|....*....|....
gi 159524436  82 NWSNIlSWSIISMMFLLILLLGLYHEWNQGALEW 115
Cdd:CHL00022  87 DVLGV-SAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 3.57e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 45.43  E-value: 3.57e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436  19 MMLASILSKKTINdREKASPFECGFDPKSSARLP--FSLRFFLIAVIFLIFDVEIALLLPviiimnWS---NILSW-SII 92
Cdd:PRK07928  22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP------WAvsfDALGVfGLV 94

                         90       100
                 ....*....|....*....|....
gi 159524436  93 SMMFLLILLLGLY-HEWNQGALEW 115
Cdd:PRK07928  95 EMALFMLTVFVAYaYVWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
5-117 1.52e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 43.89  E-value: 1.52e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   5 FIVSSFTVILTSIVMMLASILSKKTIN---DREKASPFECGFDP-KSSARLpfSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:PRK08489  14 FVLLVLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVD 91

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 159524436  81 MnwsNILSW-SIISM-MFLLILLLGLYHEWNQGALEWAS 117
Cdd:PRK08489  92 F---KLLGLfGLIEMlLFIVLLTIGFIYAWKKGALEWQS 127
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
13-115 1.47e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 40.88  E-value: 1.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436  13 ILTSIVMMLASILSKKTINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIIImnWSNILSWSII 92
Cdd:PRK07756  20 ILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVA--YDKLGLFALI 97

                         90       100
                 ....*....|....*....|....
gi 159524436  93 SMM-FLLILLLGLYHEWNQGALEW 115
Cdd:PRK07756  98 EMLiFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 5-75 5.33e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.50  E-value: 5.33e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 159524436   5 FIVSSFTVILTSIVMMLASILSKK-TINDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLL 75
Cdd:MTH00060   6 FVFFVFFLLFLVIYFFHSGLWNNKiYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLL 77
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 1.44e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 38.34  E-value: 1.44e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159524436   1 MWIMFIVSSFTVILTSIVMMLASILSKKTiNDREKASPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPVIII 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 159524436  81 MNWSNILSWsiismMFLLILLLGLYHEWNQGALEW 115
Cdd:MTH00092  80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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