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Conserved domains on  [gi|1595052779|ref|WP_133188858|]
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O-methyltransferase [Paraburkholderia guartelaensis]

Protein Classification

O-methyltransferase( domain architecture ID 11467877)

O-methyltransferase of the class I-like SAM-binding methyltransferase superfamily, such as catechol O-methyltransferases that can use various catechol-like compounds

CATH:  2.20.25.110
EC:  2.1.1.-|2.1.-.-
Gene Ontology:  GO:0008757|GO:0032259|GO:1904047|GO:0008168|GO:0008171
PubMed:  12504684|12826405
SCOP:  3000118

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 79-238 4.52e-44

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


:

Pssm-ID: 443298  Cd Length: 173  Bit Score: 146.10  E-value: 4.52e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  79 ETGRFLHNMVLAHKPARILELGSSCGVSTLYFADALRmlGSGMVVATELDAGKCAHLRSHVRMAGLDAYVDLREGDVFQT 158
Cdd:COG4122     3 EQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALP--DDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779 159 ISEL-DGTFDMVFIDVWANTYLNLFKQTERLLHAGSIVLADNMY------------TAEDAVRPYKRYLDNDPRFSTTTL 225
Cdd:COG4122    81 LPRLaDGPFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLwhgrvadparrdPSTRAIREFNEYLREDPRLESVLL 160

                         170
                  ....*....|...
gi 1595052779 226 DFESGVEFTVVVS 238
Cdd:COG4122   161 PIGDGLLLARKRG 173
 
Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 79-238 4.52e-44

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443298  Cd Length: 173  Bit Score: 146.10  E-value: 4.52e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  79 ETGRFLHNMVLAHKPARILELGSSCGVSTLYFADALRmlGSGMVVATELDAGKCAHLRSHVRMAGLDAYVDLREGDVFQT 158
Cdd:COG4122     3 EQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALP--DDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779 159 ISEL-DGTFDMVFIDVWANTYLNLFKQTERLLHAGSIVLADNMY------------TAEDAVRPYKRYLDNDPRFSTTTL 225
Cdd:COG4122    81 LPRLaDGPFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLwhgrvadparrdPSTRAIREFNEYLREDPRLESVLL 160

                         170
                  ....*....|...
gi 1595052779 226 DFESGVEFTVVVS 238
Cdd:COG4122   161 PIGDGLLLARKRG 173
Methyltransf_24 pfam13578
Methyltransferase domain; This family appears to be a methyltransferase domain.
 97-199 7.07e-15

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 433324 [Multi-domain]  Cd Length: 106  Bit Score: 68.10  E-value: 7.07e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  97 LELGSSCGVSTLYFADALRMLGSGMVVATELDAGKcAHLRSHVRMAGLDAYVDLREGDVFQTISEL-DGTFDMVFID--V 173
Cdd:pfam13578   1 VEIGTYSGVSTLWLAAALRDNGLGRLTAVDPDPGA-EEAGALLRKAGLDDRVRLIVGDSREALPSLaDGPIDLLFIDgdH 79

                          90       100
                  ....*....|....*....|....*.
gi 1595052779 174 WANTYLNLFKQTERLLHAGSIVLADN 199
Cdd:pfam13578  80 TYEAVLNDLELWLPRLAPGGVILFHD 105
PLN02589 PLN02589
caffeoyl-CoA O-methyltransferase
 74-231 7.51e-09

caffeoyl-CoA O-methyltransferase


Pssm-ID: 166230  Cd Length: 247  Bit Score: 54.61  E-value: 7.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  74 LAVSEETGRFLhNMVLAHKPAR-ILELGSSCGVSTLyfADALRMLGSGMVVATELDAGKCAHLRSHVRMAGLDAYVDLRE 152
Cdd:PLN02589   61 MTTSADEGQFL-NMLLKLINAKnTMEIGVYTGYSLL--ATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779 153 GDVFQTISEL------DGTFDMVFIDVWANTYLNLFKQTERLLHAGSIVLADN------MYTAEDA-VRPYKRY------ 213
Cdd:PLN02589  138 GPALPVLDQMiedgkyHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNtlwngsVVAPPDApMRKYVRYyrdfvl 217

                         170       180
                  ....*....|....*....|...
gi 1595052779 214 -----LDNDPRFSTTTLDFESGV 231
Cdd:PLN02589  218 elnkaLAADPRIEICMLPVGDGI 240
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 95-196 2.37e-07

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 47.81  E-value: 2.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  95 RILELGSSCGVSTLYFADAlrmlGSGMVVATELDAGKCAHLRSHVRMAGLDaYVDLREGDVFQTISELDGTFDMVFIDV- 173
Cdd:cd02440     1 RVLDLGCGTGALALALASG----PGARVTGVDISPVALELARKAAAALLAD-NVEVLKGDAEELPPEADESFDVIISDPp 75

                          90       100
                  ....*....|....*....|....*.
gi 1595052779 174 ---WANTYLNLFKQTERLLHAGSIVL 196
Cdd:cd02440    76 lhhLVEDLARFLEEARRLLKPGGVLV 101
 
Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 79-238 4.52e-44

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443298  Cd Length: 173  Bit Score: 146.10  E-value: 4.52e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  79 ETGRFLHNMVLAHKPARILELGSSCGVSTLYFADALRmlGSGMVVATELDAGKCAHLRSHVRMAGLDAYVDLREGDVFQT 158
Cdd:COG4122     3 EQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALP--DDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779 159 ISEL-DGTFDMVFIDVWANTYLNLFKQTERLLHAGSIVLADNMY------------TAEDAVRPYKRYLDNDPRFSTTTL 225
Cdd:COG4122    81 LPRLaDGPFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLwhgrvadparrdPSTRAIREFNEYLREDPRLESVLL 160

                         170
                  ....*....|...
gi 1595052779 226 DFESGVEFTVVVS 238
Cdd:COG4122   161 PIGDGLLLARKRG 173
Methyltransf_24 pfam13578
Methyltransferase domain; This family appears to be a methyltransferase domain.
 97-199 7.07e-15

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 433324 [Multi-domain]  Cd Length: 106  Bit Score: 68.10  E-value: 7.07e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  97 LELGSSCGVSTLYFADALRMLGSGMVVATELDAGKcAHLRSHVRMAGLDAYVDLREGDVFQTISEL-DGTFDMVFID--V 173
Cdd:pfam13578   1 VEIGTYSGVSTLWLAAALRDNGLGRLTAVDPDPGA-EEAGALLRKAGLDDRVRLIVGDSREALPSLaDGPIDLLFIDgdH 79

                          90       100
                  ....*....|....*....|....*.
gi 1595052779 174 WANTYLNLFKQTERLLHAGSIVLADN 199
Cdd:pfam13578  80 TYEAVLNDLELWLPRLAPGGVILFHD 105
Methyltransf_3 pfam01596
O-methyltransferase; Members of this family are O-methyltransferases. The family includes ...
 74-231 1.51e-09

O-methyltransferase; Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase, caffeoyl-CoA O-methyltransferase and a family of bacterial O-methyltransferases that may be involved in antibiotic production.


Pssm-ID: 396257 [Multi-domain]  Cd Length: 203  Bit Score: 55.97  E-value: 1.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  74 LAVSEETGRFLHNMVLAHKPARILELGSSCGVSTLyfADALRMLGSGMVVATELDAGKCAHLRSHVRMAGLDAYVDLREG 153
Cdd:pfam01596  25 MQVSPDEGQFLGMLVKLTGAKNVLEIGVFTGYSAL--AMALALPEDGKITAIDIDPEAYEIAKKFIQKAGVAHKISFILG 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779 154 DVFQTISEL-----DGTFDMVFIDVWANTYLNLFKQTERLLHAGSIVLADNMY-----TAEDAVRP-------YKRYLDN 216
Cdd:pfam01596 103 PALKVLEQLtqdkpLPEFDFIFIDADKSNYPNYYERLLELLKVGGLMAIDNTLwhgkvTEPDDQEAktqrlqeFNKDLAQ 182

                         170
                  ....*....|....*
gi 1595052779 217 DPRFSTTTLDFESGV 231
Cdd:pfam01596 183 DPRVEISVIPVGDGI 197
PLN02589 PLN02589
caffeoyl-CoA O-methyltransferase
 74-231 7.51e-09

caffeoyl-CoA O-methyltransferase


Pssm-ID: 166230  Cd Length: 247  Bit Score: 54.61  E-value: 7.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  74 LAVSEETGRFLhNMVLAHKPAR-ILELGSSCGVSTLyfADALRMLGSGMVVATELDAGKCAHLRSHVRMAGLDAYVDLRE 152
Cdd:PLN02589   61 MTTSADEGQFL-NMLLKLINAKnTMEIGVYTGYSLL--ATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779 153 GDVFQTISEL------DGTFDMVFIDVWANTYLNLFKQTERLLHAGSIVLADN------MYTAEDA-VRPYKRY------ 213
Cdd:PLN02589  138 GPALPVLDQMiedgkyHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNtlwngsVVAPPDApMRKYVRYyrdfvl 217

                         170       180
                  ....*....|....*....|...
gi 1595052779 214 -----LDNDPRFSTTTLDFESGV 231
Cdd:PLN02589  218 elnkaLAADPRIEICMLPVGDGI 240
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 95-196 2.37e-07

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 47.81  E-value: 2.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  95 RILELGSSCGVSTLYFADAlrmlGSGMVVATELDAGKCAHLRSHVRMAGLDaYVDLREGDVFQTISELDGTFDMVFIDV- 173
Cdd:cd02440     1 RVLDLGCGTGALALALASG----PGARVTGVDISPVALELARKAAAALLAD-NVEVLKGDAEELPPEADESFDVIISDPp 75

                          90       100
                  ....*....|....*....|....*.
gi 1595052779 174 ---WANTYLNLFKQTERLLHAGSIVL 196
Cdd:cd02440    76 lhhLVEDLARFLEEARRLLKPGGVLV 101
PLN02476 PLN02476
O-methyltransferase
 65-231 4.35e-07

O-methyltransferase


Pssm-ID: 178094  Cd Length: 278  Bit Score: 49.67  E-value: 4.35e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  65 ESSQGTPLSLAVSEETGRFLHNMVLAHKPARILELGSSCGVSTLyfADALRMLGSGMVVATELDAGKCAHLRSHVRMAGL 144
Cdd:PLN02476   91 ETSKMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSL--AVALVLPESGCLVACERDSNSLEVAKRYYELAGV 168

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779 145 DAYVDLREGDVFQTISEL-----DGTFDMVFIDVWANTYLNLFKQTERLLHAGSIVLADNMY--------TAEDA----V 207
Cdd:PLN02476  169 SHKVNVKHGLAAESLKSMiqngeGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLwhgrvadpLVNDAktisI 248

                         170       180
                  ....*....|....*....|....
gi 1595052779 208 RPYKRYLDNDPRFSTTTLDFESGV 231
Cdd:PLN02476  249 RNFNKKLMDDKRVSISMVPIGDGM 272
Gcd14 COG2519
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ...
 94-173 3.38e-06

tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 442009 [Multi-domain]  Cd Length: 249  Bit Score: 46.69  E-value: 3.38e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  94 ARILELGSSCGVSTLYFADALRmlGSGMVVATELDAGKCAHLRSHVRMAGLDAYVDLREGDVFQTISEldGTFDMVFIDV 173
Cdd:COG2519    93 ARVLEAGTGSGALTLALARAVG--PEGKVYSYERREDFAEIARKNLERFGLPDNVELKLGDIREGIDE--GDVDAVFLDM 168
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 96-171 6.19e-06

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 43.71  E-value: 6.19e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1595052779  96 ILELGSSCGVSTLYFADAlrmlGSGMVVATELDAGKCAHLRSHVRMAGLDayVDLREGDVfQTISELDGTFDMVFI 171
Cdd:pfam13649   1 VLDLGCGTGRLTLALARR----GGARVTGVDLSPEMLERARERAAEAGLN--VEFVQGDA-EDLPFPDGSFDLVVS 69
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
 92-170 9.61e-06

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 44.91  E-value: 9.61e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1595052779  92 KPARILELGSSCGVSTLYFADALRmlgsGMVVATELDAGKCAHLRSHVRMAGLDAyVDLREGDVFQTISELDGTFDMVF 170
Cdd:COG0500    26 KGGRVLDLGCGTGRNLLALAARFG----GRVIGIDLSPEAIALARARAAKAGLGN-VEFLVADLAELDPLPAESFDLVV 99
PLN02781 PLN02781
Probable caffeoyl-CoA O-methyltransferase
 74-231 2.29e-05

Probable caffeoyl-CoA O-methyltransferase


Pssm-ID: 215417  Cd Length: 234  Bit Score: 44.04  E-value: 2.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  74 LAVSEETGRFLHNMVLAHKPARILELGSSCGVSTLyfADALRMLGSGMVVATELDAGKCAHLRSHVRMAGLDAYVDLREG 153
Cdd:PLN02781   50 MEVPVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLL--TTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS 127

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779 154 DVFQTISEL-----DGTFDMVFIDVWANTYLNLFKQTERLLHAGSIVLADN-----------------MYTAEDAVRPYK 211
Cdd:PLN02781  128 DALSALDQLlnndpKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDNtlwfgfvaqeedevpehMRAYRKALLEFN 207

                         170       180
                  ....*....|....*....|
gi 1595052779 212 RYLDNDPRFSTTTLDFESGV 231
Cdd:PLN02781  208 KLLASDPRVEISQISIGDGV 227
Tam COG4106
Trans-aconitate methyltransferase [Energy production and conversion];
92-190 3.32e-04

Trans-aconitate methyltransferase [Energy production and conversion];


Pssm-ID: 443282 [Multi-domain]  Cd Length: 100  Bit Score: 38.65  E-value: 3.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  92 KPARILELGSSCGVSTLYFADALRmlgSGMVVATELDAGKCAHLRSHVrmagldAYVDLREGDVFQTisELDGTFDMVFi 171
Cdd:COG4106     1 PPRRVLDLGCGTGRLTALLAERFP---GARVTGVDLSPEMLARARARL------PNVRFVVADLRDL--DPPEPFDLVV- 68

                          90
                  ....*....|....*....
gi 1595052779 172 dvwANTYLNLFKQTERLLH 190
Cdd:COG4106    69 ---SNAALHWLPDHAALLA 84
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 79-171 7.26e-04

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 38.82  E-value: 7.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  79 ETGRFLHNMVLAHKPARILELGSSCGVSTLYFADAlrmlgSGMVVATELDAGKCAHLRSHVRMAGLDayVDLREGDVfQT 158
Cdd:COG2226     9 DGREALLAALGLRPGARVLDLGCGTGRLALALAER-----GARVTGVDISPEMLELARERAAEAGLN--VEFVVGDA-ED 80

                          90
                  ....*....|...
gi 1595052779 159 ISELDGTFDMVFI 171
Cdd:COG2226    81 LPFPDGSFDLVIS 93
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
 89-196 9.63e-04

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 38.76  E-value: 9.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  89 LAHKP-ARILELGSSCGVSTLYFAdalRMLGSgMVVATELDAGKCAHLRSHVRMAGLDAYVDLREGDVFQTisELDGTFD 167
Cdd:COG2230    47 LGLKPgMRVLDIGCGWGGLALYLA---RRYGV-RVTGVTLSPEQLEYARERAAEAGLADRVEVRLADYRDL--PADGQFD 120

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1595052779 168 MVF-IDVW----ANTYLNLFKQTERLLHAGSIVL 196
Cdd:COG2230   121 AIVsIGMFehvgPENYPAYFAKVARLLKPGGRLL 154
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 89-170 1.74e-03

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 37.30  E-value: 1.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1595052779  89 LAHKPARILELGSSCGVSTLYFADAlrmlgsGM-VVATELDAGKCAHLRSHVRMAGldayVDLREGDvFQTISELDGTFD 167
Cdd:COG2227    21 LLPAGGRVLDVGCGTGRLALALARR------GAdVTGVDISPEALEIARERAAELN----VDFVQGD-LEDLPLEDGSFD 89


                  ...
gi 1595052779 168 MVF 170
Cdd:COG2227    90 LVI 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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