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Conserved domains on  [gi|1583979811|gb|QBH01931|]
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glycosyltransferase [Xanthomonas oryzae]

Protein Classification

WecB/TagA/CpsF family glycosyltransferase( domain architecture ID 10004940)

WecB/TagA/CpsF family glycosyltransferase catalyzes the formation of glycosidic bonds and may be involved in the biosynthesis of repeating polysaccharide units found in membrane glycolipids

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
WecG COG1922
UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family [Cell wall/membrane ...
24-257 5.76e-79

UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 441525  Cd Length: 244  Bit Score: 238.52  E-value: 5.76e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  24 IALGGFPVLSTTQEAFALDLFHALAARQPRRVFFANTNFIVQCQ---ALRMRMREpSVRIVNDGIGMDLAARLiHGRRFA 100
Cdd:COG1922     4 VNILGVPVDALTMEEAVERILEALEEGRPGYVVTANAEHLMLARrdpELREALNR-ADLVLPDGIGVVWAARL-LGRPLP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 101 GNLNGTDLIPYLCRESAQP-LKFFLLGGRPGVGKTAAATLTGTL-GQQVVGMCDGYGEFAAAGEGLTERINRSGADVLLV 178
Cdd:COG1922    82 ERVTGSDLMPALLERAAEKgLRVFLLGGKPGVAEKAAANLRQRYpGLRIAGTHHGYFRFPEEEEAIIERINASGPDILFV 161
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1583979811 179 AFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEPRRLLKRYSWDLLVFFRTCLR 257
Cdd:COG1922   162 GLGAPKQEKWIARNRDRLPVAVIIGVGGAFDFLAGTVKRAPRWMQRLGLEWLYRLLQEPRRLWRRYLLPNPLFLLLVLR 240
 
Name Accession Description Interval E-value
WecG COG1922
UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family [Cell wall/membrane ...
24-257 5.76e-79

UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441525  Cd Length: 244  Bit Score: 238.52  E-value: 5.76e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  24 IALGGFPVLSTTQEAFALDLFHALAARQPRRVFFANTNFIVQCQ---ALRMRMREpSVRIVNDGIGMDLAARLiHGRRFA 100
Cdd:COG1922     4 VNILGVPVDALTMEEAVERILEALEEGRPGYVVTANAEHLMLARrdpELREALNR-ADLVLPDGIGVVWAARL-LGRPLP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 101 GNLNGTDLIPYLCRESAQP-LKFFLLGGRPGVGKTAAATLTGTL-GQQVVGMCDGYGEFAAAGEGLTERINRSGADVLLV 178
Cdd:COG1922    82 ERVTGSDLMPALLERAAEKgLRVFLLGGKPGVAEKAAANLRQRYpGLRIAGTHHGYFRFPEEEEAIIERINASGPDILFV 161
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1583979811 179 AFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEPRRLLKRYSWDLLVFFRTCLR 257
Cdd:COG1922   162 GLGAPKQEKWIARNRDRLPVAVIIGVGGAFDFLAGTVKRAPRWMQRLGLEWLYRLLQEPRRLWRRYLLPNPLFLLLVLR 240
Glyco_transf_WecG_TagA cd06533
The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus ...
80-244 6.34e-67

The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.


Pssm-ID: 119439  Cd Length: 171  Bit Score: 205.01  E-value: 6.34e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  80 IVNDGIGMDLAARLIhGRRFAGNLNGTDLIPYLCRESAQ-PLKFFLLGGRPGVGKTAAATLTGTL-GQQVVGMCDGYGEF 157
Cdd:cd06533     7 VLPDGIGVVWAARLL-GGPLPERVTGSDLMPALLELAAQkGLRVFLLGAKPEVLEKAAERLRARYpGLKIVGYHHGYFGP 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 158 AAAGEgLTERINRSGADVLLVAFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEP 237
Cdd:cd06533    86 EEEEE-IIERINASGADILFVGLGAPKQELWIARHKDRLPVPVAIGVGGSFDFLAGTVKRAPKWMQKLGLEWLYRLLQEP 164

                  ....*..
gi 1583979811 238 RRLLKRY 244
Cdd:cd06533   165 RRLWRRY 171
Glyco_tran_WecG pfam03808
Glycosyl transferase WecG/TagA/CpsF family; The WecG member of this family, believed to be ...
80-244 9.63e-66

Glycosyl transferase WecG/TagA/CpsF family; The WecG member of this family, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.


Pssm-ID: 461059  Cd Length: 168  Bit Score: 201.92  E-value: 9.63e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  80 IVNDGIGMDLAARLiHGRRFAGNLNGTDLIPYLCRESAQ-PLKFFLLGGRPGVGKTAAATLTGTL-GQQVVGMCDGYGEf 157
Cdd:pfam03808   4 VLPDGIGVVWAARL-LGRPLPERVAGSDLFPALLEAAARrGLRVFLLGGKPGVAEKAAENLRQRYpGLRIAGRHHGYFG- 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 158 AAAGEGLTERINRSGADVLLVAFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEP 237
Cdd:pfam03808  82 KEEEEAIIEAINASGPDILFVGLGAPKQEKWIARNRDGLPVAVIIGVGGSFDFLAGRVKRAPRWMQRLGLEWLYRLLQEP 161

                  ....*..
gi 1583979811 238 RRLLKRY 244
Cdd:pfam03808 162 KRLWRRY 168
wecG_tagA_cpsF TIGR00696
bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; The WecG member of this ...
77-245 1.44e-30

bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 129779  Cd Length: 177  Bit Score: 112.19  E-value: 1.44e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  77 SVRIVNDGIGMDLAARLIhGRRFAGNLNGTDLIPYLC-RESAQPLKFFLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYG 155
Cdd:TIGR00696   6 AELVTPDGIGVVWGLKLL-GYPQQSRVAGPDLMEELCqRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 156 EfAAAGEGLTERINRSGADVLLVAFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLN 235
Cdd:TIGR00696  85 E-PEERKAALAKIARSGAGIVFVGLGCPKQEIWMRNHRHLKPDAVMIGVGGSFDVFSGLVKRAPRWLMRLGLEWLYRLRM 163
                         170
                  ....*....|
gi 1583979811 236 EPRRLLKRYS 245
Cdd:TIGR00696 164 EPWRWKRMLL 173
PRK03692 PRK03692
putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
123-253 2.35e-21

putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional


Pssm-ID: 179631  Cd Length: 243  Bit Score: 89.66  E-value: 2.35e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 123 FLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYgeFAAAG-EGLTERINRSGADVLLVAFGNPLQERWILD----HSHALg 197
Cdd:PRK03692  109 FLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGY--FTPEQrQALFERIHASGAKIVTVAMGSPKQEIFMRDcrlvYPDAL- 185
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1583979811 198 vplVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEPRRLlkRYSWDLLVFFR 253
Cdd:PRK03692  186 ---YMGVGGTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRI--RRQLRLLRYLR 236
 
Name Accession Description Interval E-value
WecG COG1922
UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family [Cell wall/membrane ...
24-257 5.76e-79

UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441525  Cd Length: 244  Bit Score: 238.52  E-value: 5.76e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  24 IALGGFPVLSTTQEAFALDLFHALAARQPRRVFFANTNFIVQCQ---ALRMRMREpSVRIVNDGIGMDLAARLiHGRRFA 100
Cdd:COG1922     4 VNILGVPVDALTMEEAVERILEALEEGRPGYVVTANAEHLMLARrdpELREALNR-ADLVLPDGIGVVWAARL-LGRPLP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 101 GNLNGTDLIPYLCRESAQP-LKFFLLGGRPGVGKTAAATLTGTL-GQQVVGMCDGYGEFAAAGEGLTERINRSGADVLLV 178
Cdd:COG1922    82 ERVTGSDLMPALLERAAEKgLRVFLLGGKPGVAEKAAANLRQRYpGLRIAGTHHGYFRFPEEEEAIIERINASGPDILFV 161
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1583979811 179 AFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEPRRLLKRYSWDLLVFFRTCLR 257
Cdd:COG1922   162 GLGAPKQEKWIARNRDRLPVAVIIGVGGAFDFLAGTVKRAPRWMQRLGLEWLYRLLQEPRRLWRRYLLPNPLFLLLVLR 240
Glyco_transf_WecG_TagA cd06533
The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus ...
80-244 6.34e-67

The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.


Pssm-ID: 119439  Cd Length: 171  Bit Score: 205.01  E-value: 6.34e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  80 IVNDGIGMDLAARLIhGRRFAGNLNGTDLIPYLCRESAQ-PLKFFLLGGRPGVGKTAAATLTGTL-GQQVVGMCDGYGEF 157
Cdd:cd06533     7 VLPDGIGVVWAARLL-GGPLPERVTGSDLMPALLELAAQkGLRVFLLGAKPEVLEKAAERLRARYpGLKIVGYHHGYFGP 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 158 AAAGEgLTERINRSGADVLLVAFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEP 237
Cdd:cd06533    86 EEEEE-IIERINASGADILFVGLGAPKQELWIARHKDRLPVPVAIGVGGSFDFLAGTVKRAPKWMQKLGLEWLYRLLQEP 164

                  ....*..
gi 1583979811 238 RRLLKRY 244
Cdd:cd06533   165 RRLWRRY 171
Glyco_tran_WecG pfam03808
Glycosyl transferase WecG/TagA/CpsF family; The WecG member of this family, believed to be ...
80-244 9.63e-66

Glycosyl transferase WecG/TagA/CpsF family; The WecG member of this family, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.


Pssm-ID: 461059  Cd Length: 168  Bit Score: 201.92  E-value: 9.63e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  80 IVNDGIGMDLAARLiHGRRFAGNLNGTDLIPYLCRESAQ-PLKFFLLGGRPGVGKTAAATLTGTL-GQQVVGMCDGYGEf 157
Cdd:pfam03808   4 VLPDGIGVVWAARL-LGRPLPERVAGSDLFPALLEAAARrGLRVFLLGGKPGVAEKAAENLRQRYpGLRIAGRHHGYFG- 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 158 AAAGEGLTERINRSGADVLLVAFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEP 237
Cdd:pfam03808  82 KEEEEAIIEAINASGPDILFVGLGAPKQEKWIARNRDGLPVAVIIGVGGSFDFLAGRVKRAPRWMQRLGLEWLYRLLQEP 161

                  ....*..
gi 1583979811 238 RRLLKRY 244
Cdd:pfam03808 162 KRLWRRY 168
wecG_tagA_cpsF TIGR00696
bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; The WecG member of this ...
77-245 1.44e-30

bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 129779  Cd Length: 177  Bit Score: 112.19  E-value: 1.44e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811  77 SVRIVNDGIGMDLAARLIhGRRFAGNLNGTDLIPYLC-RESAQPLKFFLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYG 155
Cdd:TIGR00696   6 AELVTPDGIGVVWGLKLL-GYPQQSRVAGPDLMEELCqRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 156 EfAAAGEGLTERINRSGADVLLVAFGNPLQERWILDHSHALGVPLVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLN 235
Cdd:TIGR00696  85 E-PEERKAALAKIARSGAGIVFVGLGCPKQEIWMRNHRHLKPDAVMIGVGGSFDVFSGLVKRAPRWLMRLGLEWLYRLRM 163
                         170
                  ....*....|
gi 1583979811 236 EPRRLLKRYS 245
Cdd:TIGR00696 164 EPWRWKRMLL 173
PRK03692 PRK03692
putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
123-253 2.35e-21

putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional


Pssm-ID: 179631  Cd Length: 243  Bit Score: 89.66  E-value: 2.35e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1583979811 123 FLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYgeFAAAG-EGLTERINRSGADVLLVAFGNPLQERWILD----HSHALg 197
Cdd:PRK03692  109 FLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGY--FTPEQrQALFERIHASGAKIVTVAMGSPKQEIFMRDcrlvYPDAL- 185
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1583979811 198 vplVFGVGALLDFLSGTAKRAPEWVRRLHLEWMYRLLNEPRRLlkRYSWDLLVFFR 253
Cdd:PRK03692  186 ---YMGVGGTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRI--RRQLRLLRYLR 236
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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